TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716394.2.1
(1074 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA013740.1|CA013740 HT09F16r HT Hordeum vulgare subsp. v... 300 e-123
emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative ... 179 e-103
gb|BG299548.2|BG299548 HVSMEa0020L05f Hordeum vulgare seedl... 236 e-102
dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, comple... 176 2e-099
dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, ... 161 1e-097
gb|BU994638.1|BU994638 HM07L09r HM Hordeum vulgare subsp. v... 236 8e-083
gb|BF259636.2|BF259636 HVSMEf0019N17f Hordeum vulgare seedl... 162 2e-078
gb|CA013566.1|CA013566 HT08N17r HT Hordeum vulgare subsp. v... 242 2e-077
gb|BJ477441.1|BJ477441 BJ477441 K. Sato unpublished cDNA li... 285 4e-076
gb|BU994050.1|BU994050 HM05I13r HM Hordeum vulgare subsp. v... 280 1e-074
gb|BM816691.1|BM816691 HB01E06_T3.ab1 HB Hordeum vulgare su... 176 2e-073
gb|CB880169.1|CB880169 HM05L09w HM Hordeum vulgare subsp. v... 259 1e-068
gb|CB880704.1|CB880704 HM07I13w HM Hordeum vulgare subsp. v... 255 9e-068
gb|BU995510.1|BU995510 HM10H13r HM Hordeum vulgare subsp. v... 236 6e-067
gb|CA007997.1|CA007997 HU09J17r HU Hordeum vulgare subsp. v... 236 5e-065
gb|AL500148.1|AL500148 AL500148 Hordeum vulgare Barke etiol... 231 5e-064
gb|BG367597.1|BG367597 HVSMEi0012O03f Hordeum vulgare 20 DA... 150 5e-060
gb|AV924725.1|AV924725 AV924725 K. Sato unpublished cDNA li... 161 2e-058
gb|BG365054.1|BG365054 HVSMEi0001A24f Hordeum vulgare 20 DA... 121 1e-057
gb|BF257877.2|BF257877 HVSMEf0014B21f Hordeum vulgare seedl... 162 3e-057
gb|BI777481.2|BI777481 EBro04_SQ001_F17_R root, 3 week, sal... 221 6e-057
gb|AV932404.1|AV932404 AV932404 K. Sato unpublished cDNA li... 107 6e-054
gb|BM374816.1|BM374816 EBma05_SQ002_P04_R maternal, 12 DPA,... 105 3e-053
gb|BG310017.1|BG310017 HVSMEc0016B05f Hordeum vulgare seedl... 98 2e-050
gb|CA031460.1|CA031460 HX10A17r HX Hordeum vulgare subsp. v... 145 8e-050
gb|BI959427.1|BI959427 HVSMEn0019J24f Hordeum vulgare rachi... 143 5e-049
gb|CB881631.1|CB881631 HM10G14w HM Hordeum vulgare subsp. v... 187 1e-046
gb|CA010720.1|CA010720 HT08N17u HT Hordeum vulgare subsp. v... 153 3e-046
gb|BJ469034.1|BJ469034 BJ469034 K. Sato unpublished cDNA li... 80 1e-045
gb|BJ472010.1|BJ472010 BJ472010 K. Sato unpublished cDNA li... 80 1e-045
gb|AV935264.1|AV935264 AV935264 K. Sato unpublished cDNA li... 126 3e-045
gb|BF620729.3|BF620729 HVSMEc0020L05f Hordeum vulgare seedl... 162 7e-045
gb|BE060618.3|BE060618 HVSMEg0012M16f Hordeum vulgare pre-a... 143 5e-044
gb|BF255497.2|BF255497 HVSMEf0007A08f Hordeum vulgare seedl... 149 3e-042
gb|BM444365.1|BM444365 EBem09_SQ004_P02_R embryo, 1 Day ger... 146 4e-042
gb|AV932814.1|AV932814 AV932814 K. Sato unpublished cDNA li... 75 5e-042
gb|BQ470652.1|BQ470652 HX03J22r HX Hordeum vulgare subsp. v... 145 5e-042
gb|BI779631.2|BI779631 EBro01_SQ004_K02_R root, 3 week, hyd... 150 1e-041
gb|BM443141.2|BM443141 EBro02_SQ002_N03_R root, 3 week, hyd... 150 1e-041
gb|BQ754685.1|BQ754685 EBed01_SQ003_I09_R endosperm, 6 DPA,... 167 1e-040
gb|AV929820.1|AV929820 AV929820 K. Sato unpublished cDNA li... 108 4e-039
gb|CA022655.1|CA022655 HZ43P13r HZ Hordeum vulgare subsp. v... 150 1e-038
gb|BM375587.2|BM375587 EBem06_SQ003_M19_R embryo, 21 DPA, n... 141 3e-038
gb|BJ473467.1|BJ473467 BJ473467 K. Sato unpublished cDNA li... 102 5e-038
gb|BM372422.2|BM372422 EBro03_SQ004_O15_R root, 3 week, wat... 110 5e-038
gb|AV935442.1|AV935442 AV935442 K. Sato unpublished cDNA li... 94 2e-035
gb|BJ454144.1|BJ454144 BJ454144 K. Sato unpublished cDNA li... 95 4e-035
gb|BJ461676.1|BJ461676 BJ461676 K. Sato unpublished cDNA li... 95 4e-035
gb|BJ457937.1|BJ457937 BJ457937 K. Sato unpublished cDNA li... 90 2e-033
gb|AL500474.1|AL500474 AL500474 Hordeum vulgare Barke etiol... 131 6e-030
gb|BQ471244.1|BQ471244 HV01N01T HV Hordeum vulgare subsp. v... 129 3e-029
gb|AV920399.1|AV920399 AV920399 K. Sato unpublished cDNA li... 86 5e-029
gb|CB876328.1|CB876328 HX10P08w HX Hordeum vulgare subsp. v... 86 5e-029
gb|AJ434759.1|AJ434759 AJ434759 S00002 Hordeum vulgare subs... 76 5e-029
gb|BF262096.3|BF262096 HV_CEa0003B02f Hordeum vulgare seedl... 127 1e-028
gb|BF622281.3|BF622281 HVSMEa0002I07f Hordeum vulgare seedl... 73 7e-026
gb|CA006886.1|CA006886 HU05P20r HU Hordeum vulgare subsp. v... 75 3e-023
gb|BM372230.2|BM372230 EBro03_SQ004_G04_R root, 3 week, wat... 73 3e-023
gb|BJ450513.1|BJ450513 BJ450513 K. Sato unpublished cDNA li... 73 4e-021
gb|BQ465264.1|BQ465264 HU03B21r HU Hordeum vulgare subsp. v... 81 4e-021
>gb|CA013740.1|CA013740 HT09F16r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F16
5-PRIME, mRNA sequence
Length = 632
Score = 300 bits (649), Expect(2) = e-123
Identities = 113/137 (82%), Positives = 128/137 (93%)
Frame = -2 / +2
Query: 662 KTSYNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTA 483
K+SYNLTESLMFLAHFVGDVHQPLHVG+E+DEGGNTITVHWYRRKANLHHVWDVSIIDT
Sbjct: 221 KSSYNLTESLMFLAHFVGDVHQPLHVGYEEDEGGNTITVHWYRRKANLHHVWDVSIIDTV 400
Query: 482 IKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCNYAYKD 303
+KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK ATCANDYAIESI+ +CNYAYKD
Sbjct: 401 MKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKATCANDYAIESINLACNYAYKD 580
Query: 302 VEQDITLGDDYFFSRYP 252
V Q+ITLGDDY+ +RYP
Sbjct: 581 VVQNITLGDDYYLTRYP 631
Score = 220 bits (474), Expect(2) = 1e-085
Identities = 103/137 (75%), Positives = 112/137 (81%)
Frame = +1 / -3
Query: 253 GYLLKK*SSPRVMSCSTSL*A*LQE*WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFI 432
GY ++ *SSPRVM C+TSL A*L +MLSIA*SFAQVA L Q SQ SSD PSVR +
Sbjct: 630 GYRVR**SSPRVMFCTTSLYA*LHARFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLV 451
Query: 433 LRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSP 612
RASTMVS LLL*KS + VS+MLTSHT WR AFLRYQ TVMVLPPSSSS PTCSGW TSP
Sbjct: 450 WRASTMVSRLLL*KSFMTVSMMLTSHTWWRLAFLRYQCTVMVLPPSSSS*PTCSGWCTSP 271
Query: 613 TKCARNIRLSVRLYEVF 663
TKCARN+RLSVRLYE+F
Sbjct: 270 TKCARNMRLSVRLYELF 220
Score = 162 bits (349), Expect(2) = 1e-052
Identities = 79/134 (58%), Positives = 97/134 (72%)
Frame = +3 / -2
Query: 252 RVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRIVVRAGRVFVLAIFPVDDVVRPSICKIH 431
RVP E IIIS S+VL HIFV VVA + AL+R+VV AGR+ V A P D+V P+ ++
Sbjct: 631 RVPGEVIIISQSNVLHHIFVCVVARQVYALDRVVVCAGRLLVGAALPATDIVGPTFGEVG 452
Query: 432 LESLYHGIHALVVEVLDRRINNADIPHVMEVCFPPVPVDGDGVTALVIFEAYVQRLVDVA 611
LE + HG+ ALVVEVL R+++ADIPHV+EV P VPV DGV ALV+ A VQRLV V
Sbjct: 451 LEGVDHGVEALVVEVLHDRVDDADIPHVVEVGLPAVPVHRDGVAALVLLVADVQRLVHVP 272
Query: 612 DEVCQEHQALRQVI 653
EV QEH+ALRQV+
Sbjct: 271 HEVRQEHEALRQVV 230
Score = 161 bits (347), Expect(2) = e-123
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = -2 / +2
Query: 863 GELSTVCPWADQVRWHYHWASPLHYANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTD 684
GELSTVCPWAD +R+ YHWASPLHYANTP VCNF +SRDCHNSRG+QGMCVVGAINNYTD
Sbjct: 11 GELSTVCPWADTMRFRYHWASPLHYANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTD 190
Query: 683 QLYSYGQKTS 654
QLY+YG +S
Sbjct: 191 QLYTYGDSSS 220
Score = 121 bits (258), Expect(3) = 3e-043
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -1 / +1
Query: 540 VPEESKPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDL 361
VP+E +PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DL
Sbjct: 343 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDL 522
Query: 360 RERLCD*EHPLFLQLRLQRCGARHHSRR*LFFQ*VP 253
R+RL D EH +QLR+QRCGA H+S R*L VP
Sbjct: 523 RKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVP 630
Score = 117 bits (250), Expect(2) = 1e-085
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = +1 / -3
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL+APTTHIPC PRELWQSRE KLQT GVLA*WSGLAQW R SAHGH
Sbjct: 207 P*V*SWSV*LLMAPTTHIPCSPRELWQSREKSKLQTLGVLA*WSGLAQWYRNRIVSAHGH 28
Query: 847 TV 852
TV
Sbjct: 27 TV 22
Score = 105 bits (224), Expect = 4e-022
Identities = 57/126 (45%), Positives = 63/126 (50%)
Frame = -3 / +3
Query: 631 CSWHXXXXXXXXXXXXXSKMTRAVTPSPSTGTGGKQTSITCGMSALLIXXXXXXXXRAWI 452
CSW ++ TRA TPS TGT G+ TS TCGMSA RA
Sbjct: 252 CSWRTSWGTCTSRCTSATRRTRAATPSRCTGTAGRPTSTTCGMSASSTRS*RTSTTRAST 431
Query: 451 PW*RLSR*ILQMDGLTTSSTGKIARTNTRPARTTMRLRASIIPATTPTKMWSKTSL*EMI 272
PW SR G T S G+ A T RPA+TT R RA ATT TKMW +T L EMI
Sbjct: 432 PWSTPSRPTSPKVGPTMSVAGRAAPTRRRPAQTTTRSRA*TWRATTHTKMWCRTLLWEMI 611
Query: 271 IFSVGT 254
I S GT
Sbjct: 612 ITSPGT 629
Score = 68.0 bits (142), Expect(3) = 3e-043
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 789 RQHPPSLQLQVFSGLPQFSWPARDVRRRGYQQLHGPALQLR 667
RQHP LQL++ +GLPQ A DVRRRG+QQLHGPAL LR
Sbjct: 85 RQHPQRLQLRLLTGLPQLPRGAGDVRRRGHQQLHGPALHLR 207
Score = 64.8 bits (135), Expect(2) = 1e-052
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +2 / -1
Query: 662 SGRSCRAGPCSC**PRRRTSLAGHENCGSPENT*SCRLGGC 784
S R CRAGPCSC* PRRRTS A +CGSP + SCR GC
Sbjct: 212 SPRRCRAGPCSC*WPRRRTSPAPRGSCGSPVRSRSCRRWGC 90
Score = 25.4 bits (49), Expect(3) = 3e-043
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 663 EDFV*PDGEPDVPG 622
++ + PDGEP VPG
Sbjct: 220 KELIQPDGEPHVPG 261
>emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nuclease (bnuc2 gene)
Length = 1139
Score = 179 bits (385), Expect(3) = e-103
Identities = 66/112 (58%), Positives = 85/112 (75%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YN TESLMFLAHFVGDVHQPLH G +D GGNTI V WYRRK+NLHHVWDV +I+ A+KD
Sbjct: 437 YNRTESLMFLAHFVGDVHQPLHCGRVEDLGGNTILVRWYRRKSNLHHVWDVDVIEQAMKD 616
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCN 318
Y + DTM++A++ N+T+ WS + WE C+++ TCA+ YA ES +C+
Sbjct: 617 LYGRDQDTMIKAIQRNITEDWSSEEKQWEACRSRTKTCADKYAEESAVLACD 772
Score = 160 bits (344), Expect(3) = e-103
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+++A+A V+ LLP SA GEL+ VC WAD R+ Y W+SPLH+
Sbjct: 128 AWGKEGHYMTCKIADGFLTKEASAGVKDLLPSSANGELAEVCSWADSQRFRYRWSSPLHF 307
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP+ C F Y+RDCH+++G + CVVGAINNYT L
Sbjct: 308 ADTPKDCKFSYARDCHDTKGNKDACVVGAINNYTAAL 418
Score = 107 bits (229), Expect(3) = 1e-045
Identities = 59/106 (55%), Positives = 63/106 (59%)
Frame = +1 / -3
Query: 337 LSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT* 516
LS A AQV L S S D SV A MVS L KS +A S+ TSHT
Sbjct: 753 LSSAYLSAQVLVLLRHASHCFSSLDQSSVMLRWMALIMVSWSLPYKSFMACSMTSTSHTW 574
Query: 517 WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLY 654
R FL YQ T MVLPP SS++P CSGW TSPTK ARNIRLSVRLY
Sbjct: 573 CRLLFLLYQRTRMVLPPRSSTRPQCSGWCTSPTKWARNIRLSVRLY 436
Score = 102 bits (217), Expect(4) = 1e-030
Identities = 51/113 (45%), Positives = 67/113 (59%)
Frame = +3 / -2
Query: 318 VAGIMDALNRIVVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINN 497
VAG L ++V AG A P+ + P + + L+ L HG+ V+VL +++
Sbjct: 772 VAGQHCTLLSVLVSAGLGSAAARLPLLLLAGPVLGDVTLDGLDHGVLVSAVQVLHGLLDD 593
Query: 498 ADIPHVMEVCFPPVPVDGDGVTALVIFEAYVQRLVDVADEVCQEHQALRQVIR 656
+PHV++V PPVP D DGV A V A VQRLV VADEV QEHQALR +IR
Sbjct: 592 VHVPHVVQVALPPVPADEDGVAAEVFHAAAVQRLVHVADEVGQEHQALRPIIR 434
Score = 77.6 bits (163), Expect(3) = 1e-045
Identities = 47/114 (41%), Positives = 56/114 (49%)
Frame = +1 / -3
Query: 685 SV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGHTVXXXX 864
+V*LL+APTTH +P WQSR L LQ++GV A SGL +R SAH HT
Sbjct: 411 AV*LLMAPTTHASLFPLVSWQSRA*LNLQSFGVSAKCSGLDHRYRKRWLSAHEHTSASSP 232
Query: 865 XXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
T A A R SAILQ M PS PHA +T+ + SS
Sbjct: 231 LADDGRRSFTPADASFVRKPSAILQVM*CPSLPHACAAGAPAAAATRTTWSSSS 70
Score = 75.3 bits (158), Expect(3) = e-103
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / +2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AYK V+QD TLGD+Y+F P+V+KR+AQ G+RLA +LNRIF G
Sbjct: 773 AYKGVKQDSTLGDEYYFKALPVVQKRIAQGGVRLAAILNRIFSG 904
Score = 36.8 bits (74), Expect(3) = 1e-045
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3 / -2
Query: 195 PIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGV 317
P++ +RQ D++L PLL++R E ++IS* VLL V V
Sbjct: 892 PVEDRRQPDAALSDPLLNDRQRLEVVLIS*GGVLLDALVRV 770
Score = 35.0 bits (70), Expect(4) = 1e-030
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = +1 / -3
Query: 184 PPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL 309
P IRL A+L P A F T G LK SSP+V SC T L
Sbjct: 903 PLKIRLRIAASLTPP*AIRF*TTGSALK*YSSPKVESCLTPL 778
Score = 32.7 bits (65), Expect(4) = 1e-030
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2 / -1
Query: 689 CSC**PRRRTSLAGHENCGSPENT*SCRLGGC 784
CSC* PR RT GSP +*+C L GC
Sbjct: 407 CSC*WPRPRTRPCSPWCRGSPGRS*TCSLLGC 312
Score = 25.8 bits (50), Expect(4) = 1e-030
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 924 LGDLADHDVALLSPR 968
+GDLA H V LL+PR
Sbjct: 172 IGDLAGHVVPLLAPR 128
>gb|BG299548.2|BG299548 HVSMEa0020L05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020L05f, mRNA sequence
Length = 800
Score = 236 bits (510), Expect(4) = e-102
Identities = 89/105 (84%), Positives = 97/105 (92%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGHIMVCK+AE+YLSE AAAAVQ LLPESAGGELSTVCPWAD +R+ YHWASPLHY
Sbjct: 171 AWGKEGHIMVCKVAERYLSEDAAAAVQELLPESAGGELSTVCPWADTMRFRYHWASPLHY 350
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTS 654
ANTP VCNF +SRDCHNSRG+QGMCVVGAINNYTDQLY+YG +S
Sbjct: 351 ANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTDQLYTYGDSSS 485
Score = 177 bits (381), Expect(3) = 7e-075
Identities = 79/123 (64%), Positives = 83/123 (67%)
Frame = +1 / -2
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL+APTTHIPC PRELWQSRE KLQT GVLA*WSGLAQW R SAHGH
Sbjct: 472 P*V*SWSV*LLMAPTTHIPCSPRELWQSREKSKLQTLGVLA*WSGLAQWYRNRIVSAHGH 293
Query: 847 TVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
TV CTAAAA SDRY SA LQTMMWPS P A +T +RSS
Sbjct: 292 TVDSSPPADSGSSSCTAAAASSDRYLSATLQTMMWPSLPQASARRGAEAASRETRSSRSS 113
Query: 1027 ARC 1035
A C
Sbjct: 112 AGC 104
Score = 132 bits (283), Expect(4) = e-102
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = -2 / +3
Query: 662 KTSYNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVW 507
K+SYNLTESLMFLAHFVGDVHQPLHVG+E+DEGGNTITVHWYRRKANLHHVW
Sbjct: 486 KSSYNLTESLMFLAHFVGDVHQPLHVGYEEDEGGNTITVHWYRRKANLHHVW 641
Score = 111 bits (238), Expect(3) = 7e-075
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / -2
Query: 508 HT*WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLYEVF 663
HT WR AFLRYQ TVMVLPPSSSS PTCSGW TSPTKCARN+RLSVRLYE+F
Sbjct: 640 HTWWRLAFLRYQCTVMVLPPSSSS*PTCSGWCTSPTKCARNMRLSVRLYELF 485
Score = 70.3 bits (147), Expect(4) = 3e-031
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3 / -1
Query: 507 PHVMEVCFPPVPVDGDGVTALVIFEAYVQRLVDVADEVCQEHQALRQVI 653
PHV+EV P VPV DGV ALV+ A VQRLV V EV QEH+ALRQV+
Sbjct: 641 PHVVEVGLPAVPVHRDGVAALVLLVADVQRLVHVPHEVRQEHEALRQVV 495
Score = 68.0 bits (142), Expect(5) = 1e-029
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1 / +2
Query: 789 RQHPPSLQLQVFSGLPQFSWPARDVRRRGYQQLHGPALQLR 667
RQHP LQL++ +GLPQ A DVRRRG+QQLHGPAL LR
Sbjct: 350 RQHPQRLQLRLLTGLPQLPRGAGDVRRRGHQQLHGPALHLR 472
Score = 64.8 bits (135), Expect(4) = 3e-031
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +2 / -3
Query: 662 SGRSCRAGPCSC**PRRRTSLAGHENCGSPENT*SCRLGGC 784
S R CRAGPCSC* PRRRTS A +CGSP + SCR GC
Sbjct: 477 SPRRCRAGPCSC*WPRRRTSPAPRGSCGSPVRSRSCRRWGC 355
Score = 46.4 bits (95), Expect(5) = 1e-029
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -3 / +1
Query: 631 CSWHXXXXXXXXXXXXXSKMTRAVTPSPSTGTGGKQTSITCG 506
CSW ++ TRA TPS TGT G+ TS TCG
Sbjct: 517 CSWRTSWGTCTSRCTSATRRTRAATPSRCTGTAGRPTSTTCG 642
Score = 38.2 bits (77), Expect(4) = e-102
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 506 DVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
DVSIIDT +KDFYNK NLT
Sbjct: 643 DVSIIDTVMKDFYNKXXXXXXXXXSTNLT 729
Score = 35.9 bits (72), Expect(5) = 1e-029
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 966 VGKGGPHHGLQDRRE 922
+G+GGPHHGLQ RRE
Sbjct: 173 LGQGGPHHGLQGRRE 217
Score = 34.5 bits (69), Expect(4) = 3e-031
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / -1
Query: 918 VLLGDLADHDVALLSP 965
V LGDLADHDVALL+P
Sbjct: 221 VPLGDLADHDVALLAP 174
Score = 32.2 bits (64), Expect(5) = 1e-029
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / +3
Query: 507 GCQHY*YGDQGLLQQE 460
GCQH+ +G +GLLQQE
Sbjct: 642 GCQHHRHGHEGLLQQE 689
Score = 31.3 bits (62), Expect(3) = 7e-075
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1 / -1
Query: 421 VRFILRASTMVSMLLL*KSLIAVSIMLTS 507
VR +L LLL*KS + VS+MLTS
Sbjct: 728 VRLVLXXXXXXXXLLL*KSFMTVSMMLTS 642
Score = 27.2 bits (53), Expect(4) = 3e-031
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / -3
Query: 462 LVVEVLDRRINNADIP 509
LVVEVL R+++ADIP
Sbjct: 687 LVVEVLHDRVDDADIP 640
Score = 25.4 bits (49), Expect(5) = 1e-029
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 663 EDFV*PDGEPDVPG 622
++ + PDGEP VPG
Sbjct: 485 KELIQPDGEPHVPG 526
Score = 24.9 bits (48), Expect(4) = e-102
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 392 WENCKNKHATCAND 351
W++ + + ATCAND
Sbjct: 759 WKSLRQQKATCAND 800
>dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds
Length = 1180
Score = 176 bits (379), Expect(3) = 2e-099
Identities = 64/112 (57%), Positives = 82/112 (73%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
+N TESLMFLAHFVGDVHQP+H G DD GGNTI + WYRRK+NLHHVWD +I +KD
Sbjct: 430 FNPTESLMFLAHFVGDVHQPMHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQTMKD 609
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCN 318
F++K D M+E+++ N+TD WS + WE C++K TCA YA ES +C+
Sbjct: 610 FFDKDQDAMIESIQRNITDDWSSEEKQWETCRSKTTTCAEKYAQESAVLACD 765
Score = 150 bits (323), Expect(3) = 2e-099
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 121 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 300
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 301 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 411
Score = 94.5 bits (200), Expect(4) = 3e-038
Identities = 48/105 (45%), Positives = 64/105 (60%)
Frame = +3 / -2
Query: 336 ALNRIVVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHV 515
AL ++ AGR F A P+ + P + + L+ L HG+ LV EVL ++ +PHV
Sbjct: 747 ALLGVLFGAGRGFAAARLPLLLLTGPVVGDVALDGLDHGVLVLVEEVLHGLRDHVRVPHV 568
Query: 516 MEVCFPPVPVDGDGVTALVIFEAYVQRLVDVADEVCQEHQALRQV 650
++V PPVP + DGV A V+ A V RLV VA EV QEHQALR+V
Sbjct: 567 VQVALPPVPSEFDGVAAEVVDVAAVHRLVHVAHEVRQEHQALRRV 433
Score = 92.3 bits (195), Expect(4) = 3e-027
Identities = 52/105 (49%), Positives = 56/105 (53%)
Frame = +1 / -3
Query: 337 LSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT* 516
LS A AQV L S S D SV S M S L KS + I SHT
Sbjct: 746 LSWAYFSAQVVVLLRHVSHCFSSLDQSSVMLRWMDSIMASWSLSKKSFMVCVITSESHTW 567
Query: 517 WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRL 651
R FL Y ++MVLPP SS+ P C GW TSPTKCARNIRLSV L
Sbjct: 566 CRLLFLLYHRSLMVLPPRSSTWPQCIGWCTSPTKCARNIRLSVGL 432
Score = 75.3 bits (158), Expect(3) = 2e-099
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2 / +1
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQD TLGD+Y+F P+V+KRLAQ G+RLA +LNRIF G
Sbjct: 766 AYEGVEQDDTLGDEYYFKALPVVQKRLAQGGLRLAAILNRIFSG 897
Score = 43.7 bits (89), Expect(4) = 3e-038
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = +1 / -3
Query: 184 PPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A 315
P IRL A+L P A+LF T G LK SSPRV SCST *A
Sbjct: 896 PLKIRLRMAASLKPPWASLF*TTGSALK*YSSPRVSSCSTPS*A 765
Score = 39.1 bits (79), Expect(4) = 3e-038
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +1 / -3
Query: 820 QRTWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHA 969
+R SAH HT T A R SAILQ M WPS PHA
Sbjct: 269 KRWLSAHEHTSASSPLAHDGRSAFTPVNASLVRKPSAILQVM*WPSLPHA 120
Score = 37.7 bits (76), Expect(4) = 3e-038
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1 / -3
Query: 679 SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
S +V*LL+APTTH +P WQS L LQ+ GV A
Sbjct: 410 SAAV*LLMAPTTHTFLFPLVSWQSLA*LNLQSPGVSA 300
Score = 33.6 bits (67), Expect(4) = 3e-027
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / -2
Query: 195 PIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGV 317
P++ RQ + L PLL++R E ++IS* VLL VGV
Sbjct: 885 PVEDGRQPQAPLGEPLLNDRQRFEVVLIS*GVVLLDALVGV 763
Score = 30.9 bits (61), Expect(4) = 3e-027
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2 / -1
Query: 689 CSC**PRRRTSLAGHENCGSPENT*SCRLGGC 784
CSC* PR RT GSP +*+C GC
Sbjct: 400 CSC*WPRPRTRSCSPWCRGSPWRS*TCSRRGC 305
Score = 27.6 bits (54), Expect(4) = 3e-027
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 924 LGDLADHDVALLSPR 968
+GDLA H VALL+PR
Sbjct: 165 VGDLAGHVVALLAPR 121
>dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, complete cds
Length = 1283
Score = 161 bits (347), Expect(3) = 1e-097
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
Y+ TESLMFLAHFVGDVHQPLH G DD GGNTI + WYRRK+NLHHVWD +I A+KD
Sbjct: 458 YDPTESLMFLAHFVGDVHQPLHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKD 637
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNK 372
F+N+ DTM+EA++ N+TD WS + WE C ++
Sbjct: 638 FFNRDQDTMIEAIQRNITDDWSSEEKQWEACGSR 739
Score = 161 bits (346), Expect(3) = 1e-097
Identities = 59/97 (60%), Positives = 77/97 (79%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A+AAV+ LLP A GEL+ VC WAD+ R+ Y W+SPLH+
Sbjct: 149 AWGKEGHYMTCKIADGFLTSEASAAVKDLLPSWANGELAEVCAWADRQRFRYRWSSPLHF 328
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP CNF Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 329 ADTPGDCNFSYARDCHDTKGNKDVCVVGAINNYTAAL 439
Score = 98.7 bits (209), Expect(3) = 4e-042
Identities = 49/84 (58%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 403 SSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQWTVMVLPPSSSSK 582
S D SV AS MVS LL KS +A I SHT R FL Y ++MVLPP SS+
Sbjct: 708 SLDQSSVMLRWMASIMVSWSLLKKSFMACVITSESHTWCRLLFLLYHRSLMVLPPRSSTW 529
Query: 583 PTCSGWWTSPTKCARNIRLSVRLY 654
P CSGW TSPTKCARNIRLSV Y
Sbjct: 528 PQCSGWCTSPTKCARNIRLSVGSY 457
Score = 73.9 bits (155), Expect(3) = 4e-042
Identities = 47/117 (40%), Positives = 57/117 (48%)
Frame = +1 / -3
Query: 679 SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGHTVXX 858
S +V*LL+APTTH +P WQS LKLQ+ GV A GL +R SAH HT
Sbjct: 438 SAAV*LLMAPTTHTSLFPLVSWQSLA*LKLQSPGVSAKCRGLDHRYRKRCLSAHAHTSAS 259
Query: 859 XXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSSA 1029
TAA A R SAILQ M PS PHA +++ + SS+
Sbjct: 258 SPLAHDGRRSFTAADASLVRKPSAILQVM*CPSLPHACAAGALATIAARST*SSSSS 88
Score = 73.5 bits (154), Expect(3) = 1e-097
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / +2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQ TLGDDY+F P+VEKR+AQ G+RLA++LN+IF G
Sbjct: 797 AYEGVEQGDTLGDDYYFRALPVVEKRIAQGGVRLAVILNQIFSG 928
Score = 37.7 bits (76), Expect(3) = 4e-042
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +1 / -3
Query: 184 PPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCST 303
P I L A+L P A LFST G K *SSP+V CST
Sbjct: 927 PLKIWLRITASLTPP*AILFSTTGNARK**SSPKVSPCST 808
>gb|BU994638.1|BU994638 HM07L09r HM Hordeum vulgare subsp. vulgare cDNA clone HM07L09
5-PRIME, mRNA sequence
Length = 648
Score = 236 bits (510), Expect(3) = 8e-083
Identities = 89/105 (84%), Positives = 97/105 (92%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGHIMVCK+AE+YLSE AAAAVQ LLPESAGGELSTVCPWAD +R+ YHWASPLHY
Sbjct: 207 AWGKEGHIMVCKVAERYLSEDAAAAVQELLPESAGGELSTVCPWADTMRFRYHWASPLHY 386
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTS 654
ANTP VCNF +SRDCHNSRG+QGMCVVGAINNYTDQLY+YG +S
Sbjct: 387 ANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTDQLYTYGDSSS 521
Score = 177 bits (381), Expect(3) = 2e-061
Identities = 79/123 (64%), Positives = 83/123 (67%)
Frame = +1 / -3
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL+APTTHIPC PRELWQSRE KLQT GVLA*WSGLAQW R SAHGH
Sbjct: 508 P*V*SWSV*LLMAPTTHIPCSPRELWQSREKSKLQTLGVLA*WSGLAQWYRNRIVSAHGH 329
Query: 847 TVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
TV CTAAAA SDRY SA LQTMMWPS P A +T +RSS
Sbjct: 328 TVDSSPPADSGSSSCTAAAASSDRYLSATLQTMMWPSLPQASARRGAEAASRETRSSRSS 149
Query: 1027 ARC 1035
A C
Sbjct: 148 AGC 140
Score = 67.5 bits (141), Expect(3) = 8e-083
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = -2 / +1
Query: 611 GDVHQPLHVGFEDDEGGNTITVHWY 537
GDVHQPLHVG+E+DEGGNTITVHWY
Sbjct: 574 GDVHQPLHVGYEEDEGGNTITVHWY 648
Score = 55.1 bits (114), Expect(3) = 2e-061
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +1 / -2
Query: 538 YQWTVMVLPPSSSSKPTCSGWWTSP 612
YQ TVMVLPPSSSS PTCSGW TSP
Sbjct: 647 YQCTVMVLPPSSSS*PTCSGWCTSP 573
Score = 43.2 bits (88), Expect(3) = 8e-083
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -2 / +3
Query: 662 KTSYNLTESLMFLAHFVG 609
K+SYNLTESLMFLAHFVG
Sbjct: 522 KSSYNLTESLMFLAHFVG 575
Score = 42.8 bits (87), Expect(3) = 2e-061
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1 / -3
Query: 610 PTKCARNIRLSVRLYEVF 663
PTKCARN+RLSVRLYE+F
Sbjct: 574 PTKCARNMRLSVRLYELF 521
>gb|BF259636.2|BF259636 HVSMEf0019N17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019N17f, mRNA sequence
Length = 755
Score = 162 bits (349), Expect(2) = 2e-078
Identities = 57/99 (57%), Positives = 77/99 (77%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
++ TESLMFLAHFVGDVHQP+H G DD GGNTI + WYR+K+NLHHVWD +I A+KD
Sbjct: 409 FDPTESLMFLAHFVGDVHQPMHCGHVDDLGGNTIKLRWYRKKSNLHHVWDSDVITQAMKD 588
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCA 357
F++K D ++E+++ N+TD WS++ WE C++K TCA
Sbjct: 589 FFDKDQDALIESIQRNITDDWSNEEKQWEACRSKTTTCA 705
Score = 150 bits (323), Expect(2) = 2e-078
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 100 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 279
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 280 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 390
Score = 87.7 bits (185), Expect(3) = 8e-027
Identities = 47/96 (48%), Positives = 51/96 (53%)
Frame = +1 / -1
Query: 358 AQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLR 537
AQV L S S D SV S S L KS +A I SHT R F
Sbjct: 704 AQVVVLLRHASHCFSSLDQSSVMLRWMDSIRASWSLSKKSFMACVITSESHTWCRLLFFL 525
Query: 538 YQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSV 645
Y ++MVLPP SS+ P C GW TSPTKCARNIRLSV
Sbjct: 524 YHRSLMVLPPRSSTWPQCIGWCTSPTKCARNIRLSV 417
Score = 37.7 bits (76), Expect(3) = 8e-027
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1 / -1
Query: 679 SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
S +V*LL+APTTH +P WQS L LQ+ GV A
Sbjct: 389 SAAV*LLMAPTTHTFLFPLVSWQSLA*LNLQSPGVSA 279
Score = 33.1 bits (66), Expect(3) = 8e-027
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1 / -1
Query: 820 QRTWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHA 969
+R SAH HT T A R SAILQ M PS PHA
Sbjct: 248 KRWLSAHEHTSASSPLAHDGRSAFTPVNASLVRKPSAILQVM*CPSLPHA 99
>gb|CA013566.1|CA013566 HT08N17r HT Hordeum vulgare subsp. vulgare cDNA clone HT08N17
5-PRIME, mRNA sequence
Length = 589
Score = 242 bits (522), Expect(2) = 2e-077
Identities = 93/128 (72%), Positives = 112/128 (87%)
Frame = -2 / +1
Query: 530 KANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCAND 351
+ NLHHVWDVSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK ATCAND
Sbjct: 115 EGNLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKATCAND 294
Query: 350 YAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGGGEAD 171
YAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRL QAG+RLAL+LNRIF +AD
Sbjct: 295 YAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLXQAGVRLALILNRIFDKKKAD 474
Query: 170 DIPLQVQ* 147
+PL +Q*
Sbjct: 475 AMPLSIQ* 498
Score = 160 bits (345), Expect(2) = 7e-052
Identities = 81/125 (64%), Positives = 92/125 (73%)
Frame = +1 / -3
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PAC +LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 497 YCMDNGIASAFFLSNILLSIKASLTPACXSLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 318
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL*KS + VS+MLTS
Sbjct: 317 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMMLTS 138
Query: 508 HT*WR 522
HT WR
Sbjct: 137 HTWWR 123
Score = 143 bits (307), Expect(2) = 5e-038
Identities = 67/120 (55%), Positives = 86/120 (71%)
Frame = +3 / -2
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 474 ICFLLVKYPVEYQGESDAGLXQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 295
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHVMEVCF 530
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++ADIPHV+EV F
Sbjct: 294 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPHVVEVAF 115
Score = 131 bits (280), Expect(2) = 2e-030
Identities = 59/112 (52%), Positives = 75/112 (66%)
Frame = -1 / +3
Query: 525 KPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDLRERLC 346
+PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DLR+RL
Sbjct: 120 QPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLRKRLR 299
Query: 345 D*EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
D EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 300 DREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETXTGRRQTRLDTQQDI 455
Score = 68.4 bits (143), Expect(2) = 2e-077
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -2 / +3
Query: 632 MFLAHFVGDVHQPLHVGFEDDEGGNTI 552
MFLAHFVGDVHQPLHVG+E+DEGGNTI
Sbjct: 18 MFLAHFVGDVHQPLHVGYEEDEGGNTI 98
Score = 63.8 bits (133), Expect(2) = 7e-052
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1 / -1
Query: 553 MVLPPSSSSKPTCSGWWTSPTKCARNI 633
MVLPPSSSS PTCSGW TSPTKCARNI
Sbjct: 97 MVLPPSSSS*PTCSGWCTSPTKCARNI 17
Score = 35.0 bits (70), Expect(2) = 5e-038
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 555 GVTALVIFEAYVQRLVDVADEVCQEHQ 635
GV ALV+ A VQRLV + EV QEH+
Sbjct: 95 GVAALVLLVADVQRLVHIPHEVRQEHR 15
Score = 22.1 bits (42), Expect(2) = 2e-030
Identities = 8/26 (30%), Positives = 10/26 (38%)
Frame = -3 / +1
Query: 631 CSWHXXXXXXXXXXXXXSKMTRAVTP 554
CSW ++ TRA TP
Sbjct: 19 CSWRTSWGMCTSRCTSATRRTRAATP 96
>gb|BJ477441.1|BJ477441 BJ477441 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g12 3', mRNA sequence
Length = 597
Score = 285 bits (616), Expect = 4e-076
Identities = 110/142 (77%), Positives = 128/142 (90%)
Frame = -2 / -3
Query: 572 DEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVH 393
DEGGNTITVHWYRRKANLHHVWDVSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+
Sbjct: 595 DEGGNTITVHWYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGR 416
Query: 392 WENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRL 213
WE+C NK ATCANDYAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RL
Sbjct: 415 WESCANKKATCANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRL 236
Query: 212 ALVLNRIFGGGEADDIPLQVQ* 147
AL+LNRIF +AD +PL +Q*
Sbjct: 235 ALILNRIFDKKKADAMPLYIQ* 170
Score = 196 bits (423), Expect = 2e-049
Identities = 97/142 (68%), Positives = 108/142 (76%)
Frame = +1 / +3
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 171 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 350
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL*KS + VS+MLTS
Sbjct: 351 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMMLTS 530
Query: 508 HT*WRFAFLRYQWTVMVLPPSS 573
HT WR AFLRYQ TVMVLPPSS
Sbjct: 531 HTWWRLAFLRYQCTVMVLPPSS 596
Score = 159 bits (342), Expect = 2e-038
Identities = 76/134 (56%), Positives = 95/134 (70%)
Frame = +3 / +2
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 194 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 373
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHVMEVCF 530
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++ADIPHV+EV
Sbjct: 374 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPHVVEVGL 553
Query: 531 PPVPVDGDGVTALV 572
P VPV DGV ALV
Sbjct: 554 PAVPVHRDGVAALV 595
Score = 139 bits (298), Expect = 3e-032
Identities = 62/117 (52%), Positives = 79/117 (67%)
Frame = -1 / -2
Query: 540 VPEESKPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDL 361
VP+E +PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DL
Sbjct: 563 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDL 384
Query: 360 RERLCD*EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
R+RL D EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 383 RKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 213
Score = 108 bits (231), Expect = 5e-023
Identities = 64/141 (45%), Positives = 70/141 (49%)
Frame = -3 / -1
Query: 571 TRAVTPSPSTGTGGKQTSITCGMSALLIXXXXXXXXRAWIPW*RLSR*ILQMDGLTTSST 392
TRA TPS TGT G+ TS TCGMSA RA PW SR G T S
Sbjct: 594 TRAATPSRCTGTAGRPTSTTCGMSASSTRS*RTSTTRASTPWSTPSRPTSPKVGPTMSVA 415
Query: 391 GKIARTNTRPARTTMRLRASIIPATTPTKMWSKTSL*EMIIFSVGTXXXXXXXXXLESDW 212
G+ A T RPA+TT R RA ATT TKMW +T L EMII S GT SD
Sbjct: 414 GRAAPTRRRPAQTTTRSRA*TWRATTHTKMWCRTLLWEMIITSPGTRLWRRDWHRPASDS 235
Query: 211 RWYLIGYLVEVKRMIYHYKYS 149
Y GYL K+M+ YS
Sbjct: 234 P*YSTGYLTRRKQMLCRCTYS 172
>gb|BU994050.1|BU994050 HM05I13r HM Hordeum vulgare subsp. vulgare cDNA clone HM05I13
5-PRIME, mRNA sequence
Length = 558
Score = 280 bits (605), Expect = 1e-074
Identities = 108/140 (77%), Positives = 126/140 (90%)
Frame = -2 / +2
Query: 566 GGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWE 387
GGNTITVHWYRRKANLHHVWDVSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE
Sbjct: 8 GGNTITVHWYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWE 187
Query: 386 NCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLAL 207
+C NK ATCANDYAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RLAL
Sbjct: 188 SCANKKATCANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLAL 367
Query: 206 VLNRIFGGGEADDIPLQVQ* 147
+LNRIF +AD +PL +Q*
Sbjct: 368 ILNRIFDKKKADAMPLYIQ* 427
Score = 193 bits (415), Expect = 2e-048
Identities = 95/140 (67%), Positives = 106/140 (75%)
Frame = +1 / -1
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 426 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 247
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL*KS + VS+MLTS
Sbjct: 246 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMMLTS 67
Query: 508 HT*WRFAFLRYQWTVMVLPP 567
HT WR AFLRYQ TVMVLPP
Sbjct: 66 HTWWRLAFLRYQCTVMVLPP 7
Score = 155 bits (334), Expect = 3e-037
Identities = 74/132 (56%), Positives = 93/132 (70%)
Frame = +3 / -3
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 403 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 224
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHVMEVCF 530
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++ADIPHV+EV
Sbjct: 223 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPHVVEVGL 44
Query: 531 PPVPVDGDGVTA 566
P VPV DGV A
Sbjct: 43 PAVPVHRDGVAA 8
Score = 139 bits (298), Expect = 3e-032
Identities = 62/117 (52%), Positives = 79/117 (67%)
Frame = -1 / +1
Query: 540 VPEESKPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDL 361
VP+E +PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DL
Sbjct: 34 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDL 213
Query: 360 RERLCD*EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
R+RL D EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 214 RKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 384
Score = 104 bits (221), Expect = 1e-021
Identities = 62/139 (44%), Positives = 68/139 (48%)
Frame = -3 / +3
Query: 565 AVTPSPSTGTGGKQTSITCGMSALLIXXXXXXXXRAWIPW*RLSR*ILQMDGLTTSSTGK 386
A TPS TGT G+ TS TCGMSA RA PW SR G T S G+
Sbjct: 9 AATPSRCTGTAGRPTSTTCGMSASSTRS*RTSTTRASTPWSTPSRPTSPKVGPTMSVAGR 188
Query: 385 IARTNTRPARTTMRLRASIIPATTPTKMWSKTSL*EMIIFSVGTXXXXXXXXXLESDWRW 206
A T RPA+TT R RA ATT TKMW +T L EMII S GT SD
Sbjct: 189 AAPTRRRPAQTTTRSRA*TWRATTHTKMWCRTLLWEMIITSPGTRLWRRDWHRPASDSP* 368
Query: 205 YLIGYLVEVKRMIYHYKYS 149
Y GYL K+M+ YS
Sbjct: 369 YSTGYLTRRKQMLCRCTYS 425
>gb|BM816691.1|BM816691 HB01E06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01E06_T3.ab1 similar to ESTs
D48949(S15541),AU097625(S15541) correspond to a region
of the predicted gene. Similar to Arabidopsis thaliana
chromosome I BAC T22E19; putative bifunctional nuclease
(AC016447) [Oryza sativa], mRNA sequence
Length = 837
Score = 176 bits (378), Expect(3) = 2e-073
Identities = 64/112 (57%), Positives = 83/112 (74%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
++ TESLMFLAHFVGDVHQP+H G DD GGNTI + WYRRK+NLHHVWD +I A+KD
Sbjct: 135 FDPTESLMFLAHFVGDVHQPMHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKD 314
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCN 318
F++K D M+E+++ N+TD WS + WE C++K TCA YA ES +C+
Sbjct: 315 FFDKDQDAMIESIQRNITDDWSSEEKQWETCRSKTTTCAEKYAQESAVLACD 470
Score = 94.5 bits (200), Expect(3) = 3e-032
Identities = 48/105 (45%), Positives = 64/105 (60%)
Frame = +3 / -2
Query: 336 ALNRIVVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHV 515
AL ++ AGR F A P+ + P + + L+ L HG+ LV EVL ++ +PHV
Sbjct: 452 ALLGVLFGAGRGFAAARLPLLLLTGPVVGDVALDGLDHGVLVLVEEVLHGLRDHVRVPHV 273
Query: 516 MEVCFPPVPVDGDGVTALVIFEAYVQRLVDVADEVCQEHQALRQV 650
++V PPVP + DGV A V+ A V RLV VA EV QEHQALR+V
Sbjct: 272 VQVALPPVPSEFDGVAAEVVDVAAVHRLVHVAHEVRQEHQALRRV 138
Score = 93.2 bits (197), Expect(3) = 2e-026
Identities = 52/103 (50%), Positives = 56/103 (54%)
Frame = +1 / -3
Query: 337 LSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT* 516
LS A AQV L S S D SV S M S L KS +A I SHT
Sbjct: 451 LSWAYFSAQVVVLLRHVSHCFSSLDQSSVMLRWMDSIMASWSLSKKSFMACVITSESHTW 272
Query: 517 WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSV 645
R FL Y ++MVLPP SS+ P C GW TSPTKCARNIRLSV
Sbjct: 271 CRLLFLLYHRSLMVLPPRSSTWPQCIGWCTSPTKCARNIRLSV 143
Score = 75.8 bits (159), Expect(3) = 2e-073
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2 / +3
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQD TLGD+Y+F P+V+KRLAQ G+RLA +LNRIF G
Sbjct: 471 AYEGVEQDDTLGDEYYFKALPVVQKRLAQGGVRLAAILNRIFSG 602
Score = 64.3 bits (134), Expect(3) = 2e-073
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2 / +3
Query: 791 YANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
+A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 3 FADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 116
Score = 44.6 bits (91), Expect(3) = 3e-032
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = +1 / -3
Query: 184 PPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A 315
P IRL A+L P A+LF T G LK SSPRV SCST *A
Sbjct: 601 PLKIRLRMAASLTPPWASLF*TTGSALK*YSSPRVSSCSTPS*A 470
Score = 37.7 bits (76), Expect(3) = 3e-032
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1 / -3
Query: 679 SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
S +V*LL+APTTH +P WQS L LQ+ GV A
Sbjct: 115 SAAV*LLMAPTTHTFLFPLVSWQSLA*LNLQSPGVSA 5
Score = 33.1 bits (66), Expect(3) = 2e-026
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / -2
Query: 195 PIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGV 317
P++ RQ + L PLL++R E ++IS* VLL VGV
Sbjct: 590 PVEDGRQPHAPLGEPLLNDRQRFEVVLIS*GVVLLDALVGV 468
Score = 30.9 bits (61), Expect(3) = 2e-026
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / -2
Query: 699 DSPDDAHPLLATRIVAVPRILEVA 770
D PD AH L+ +VAVP + E+A
Sbjct: 95 DGPDHAHVLVPLGVVAVPGVAELA 24
>gb|CB880169.1|CB880169 HM05L09w HM Hordeum vulgare subsp. vulgare cDNA clone HM05L09
3-PRIME, mRNA sequence
Length = 571
Score = 259 bits (561), Expect = 1e-068
Identities = 100/132 (75%), Positives = 118/132 (89%)
Frame = -2 / -3
Query: 542 WYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHAT 363
WYRRKANLHHVWDVSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK AT
Sbjct: 569 WYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKAT 390
Query: 362 CANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
CANDYAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RLAL+LNRIF
Sbjct: 389 CANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLALILNRIFDK 210
Query: 182 GEADDIPLQVQ* 147
+AD +PL +Q*
Sbjct: 209 KKADAMPLYIQ* 174
Score = 177 bits (381), Expect = 1e-043
Identities = 88/132 (66%), Positives = 99/132 (75%)
Frame = +1 / +1
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 175 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 354
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL*KS + VS+MLTS
Sbjct: 355 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMMLTS 534
Query: 508 HT*WRFAFLRYQ 543
HT WR AFLRYQ
Sbjct: 535 HTWWRLAFLRYQ 570
Score = 146 bits (313), Expect = 2e-034
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = +3 / +3
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 198 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 377
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHVMEVCF 530
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++ADIPHV+EV
Sbjct: 378 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPHVVEVGL 557
Query: 531 PPVP 542
P VP
Sbjct: 558 PAVP 569
Score = 139 bits (298), Expect = 3e-032
Identities = 62/117 (52%), Positives = 79/117 (67%)
Frame = -1 / -2
Query: 540 VPEESKPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDL 361
VP+E +PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DL
Sbjct: 567 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDL 388
Query: 360 RERLCD*EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
R+RL D EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 387 RKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 217
>gb|CB880704.1|CB880704 HM07I13w HM Hordeum vulgare subsp. vulgare cDNA clone HM07I13
3-PRIME, mRNA sequence
Length = 559
Score = 255 bits (551), Expect(2) = 9e-068
Identities = 100/134 (74%), Positives = 118/134 (88%)
Frame = -2 / -3
Query: 548 VHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKH 369
VH RRKANLHHVWDVSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK
Sbjct: 533 VHCTRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKK 354
Query: 368 ATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIF 189
ATCANDYAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RLAL+LNRIF
Sbjct: 353 ATCANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLALILNRIF 174
Query: 188 GGGEADDIPLQVQ* 147
+AD +PL +Q*
Sbjct: 173 DKKKADAMPLYIQ* 132
Score = 172 bits (370), Expect(2) = 8e-043
Identities = 87/134 (64%), Positives = 98/134 (73%)
Frame = +1 / +1
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 133 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 312
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q S SSD PSVR + RASTMVS LLL*KS + VS+MLTS
Sbjct: 313 RFMLSIA*SFAQVAFLLAQLSXRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMMLTS 492
Query: 508 HT*WRFAFLRYQWT 549
HT WR AFLR Q T
Sbjct: 493 HTWWRLAFLRVQCT 534
Score = 141 bits (302), Expect = 8e-033
Identities = 67/121 (55%), Positives = 86/121 (71%)
Frame = +3 / +3
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 156 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 335
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPHVMEVCF 530
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++ADIPHV+EV
Sbjct: 336 VVCAGRLLVGAALPXTDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPHVVEVGL 515
Query: 531 P 533
P
Sbjct: 516 P 518
Score = 135 bits (289), Expect = 5e-031
Identities = 60/116 (51%), Positives = 77/116 (66%)
Frame = -1 / -2
Query: 537 PEESKPPSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDLR 358
P+E +PP RVGCQH+ +G +GLLQQE +HGR D+ +R +V R R G+L++Q DLR
Sbjct: 522 PQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSXGELRQQEGDLR 343
Query: 357 ERLCD*EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
+RL D EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 342 KRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 175
Score = 22.6 bits (43), Expect(2) = 9e-068
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 572 DEGGNTIT 549
DEGGNTIT
Sbjct: 558 DEGGNTIT 535
Score = 22.1 bits (42), Expect(2) = 8e-043
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 538 YQWTVMVLPPSS 573
Y VMVLPPSS
Sbjct: 524 YSAPVMVLPPSS 559
>gb|BU995510.1|BU995510 HM10H13r HM Hordeum vulgare subsp. vulgare cDNA clone HM10H13
5-PRIME, mRNA sequence
Length = 570
Score = 236 bits (510), Expect(2) = 6e-067
Identities = 89/105 (84%), Positives = 97/105 (92%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGHIMVCK+AE+YLSE AAAAVQ LLPESAGGELSTVCPWAD +R+ YHWASPLHY
Sbjct: 207 AWGKEGHIMVCKVAERYLSEDAAAAVQELLPESAGGELSTVCPWADTMRFRYHWASPLHY 386
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTS 654
ANTP VCNF +SRDCHNSRG+QGMCVVGAINNYTDQLY+YG +S
Sbjct: 387 ANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTDQLYTYGDSSS 521
Score = 177 bits (381), Expect(2) = 8e-049
Identities = 79/123 (64%), Positives = 83/123 (67%)
Frame = +1 / -3
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL+APTTHIPC PRELWQSRE KLQT GVLA*WSGLAQW R SAHGH
Sbjct: 508 P*V*SWSV*LLMAPTTHIPCSPRELWQSREKSKLQTLGVLA*WSGLAQWYRNRIVSAHGH 329
Query: 847 TVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
TV CTAAAA SDRY SA LQTMMWPS P A +T +RSS
Sbjct: 328 TVDSSPPADSGSSSCTAAAASSDRYLSATLQTMMWPSLPQASARRGAEAASRETRSSRSS 149
Query: 1027 ARC 1035
A C
Sbjct: 148 AGC 140
Score = 38.6 bits (78), Expect(2) = 6e-067
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / +3
Query: 662 KTSYNLTESLMFLAHF 615
K+SYNLTESLMFLAHF
Sbjct: 522 KSSYNLTESLMFLAHF 569
Score = 37.3 bits (75), Expect(2) = 8e-049
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1 / -3
Query: 616 KCARNIRLSVRLYEVF 663
KCARN+RLSVRLYE+F
Sbjct: 568 KCARNMRLSVRLYELF 521
>gb|CA007997.1|CA007997 HU09J17r HU Hordeum vulgare subsp. vulgare cDNA clone HU09J17
5-PRIME, mRNA sequence
Length = 569
Score = 236 bits (510), Expect(2) = 5e-065
Identities = 89/105 (84%), Positives = 97/105 (92%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGHIMVCK+AE+YLSE AAAAVQ LLPESAGGELSTVCPWAD +R+ YHWASPLHY
Sbjct: 212 AWGKEGHIMVCKVAERYLSEDAAAAVQELLPESAGGELSTVCPWADTMRFRYHWASPLHY 391
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTS 654
ANTP VCNF +SRDCHNSRG+QGMCVVGAINNYTDQLY+YG +S
Sbjct: 392 ANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTDQLYTYGDSSS 526
Score = 177 bits (381), Expect(2) = 6e-047
Identities = 79/123 (64%), Positives = 83/123 (67%)
Frame = +1 / -3
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL+APTTHIPC PRELWQSRE KLQT GVLA*WSGLAQW R SAHGH
Sbjct: 513 P*V*SWSV*LLMAPTTHIPCSPRELWQSREKSKLQTLGVLA*WSGLAQWYRNRIVSAHGH 334
Query: 847 TVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
TV CTAAAA SDRY SA LQTMMWPS P A +T +RSS
Sbjct: 333 TVDSSPPADSGSSSCTAAAASSDRYLSATLQTMMWPSLPQASARRGAEAASRETRSSRSS 154
Query: 1027 ARC 1035
A C
Sbjct: 153 AGC 145
Score = 32.2 bits (64), Expect(2) = 5e-065
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 662 KTSYNLTESLMFLA 621
K+SYNLTESLMFLA
Sbjct: 527 KSSYNLTESLMFLA 568
Score = 30.9 bits (61), Expect(2) = 6e-047
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / -3
Query: 622 ARNIRLSVRLYEVF 663
ARN+RLSVRLYE+F
Sbjct: 567 ARNMRLSVRLYELF 526
>gb|AL500148.1|AL500148 AL500148 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05C05r 3', mRNA sequence
Length = 609
Score = 231 bits (499), Expect(2) = 5e-064
Identities = 90/124 (72%), Positives = 108/124 (87%)
Frame = -2 / -2
Query: 518 HHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIE 339
H VWDVSIIDT +KD YNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK ATCANDYAIE
Sbjct: 563 HXVWDVSIIDTVLKDXYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKATCANDYAIE 384
Query: 338 SIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGGGEADDIPL 159
SI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RLAL+LNRIF +AD +PL
Sbjct: 383 SINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLALILNRIFDKKKADAMPL 204
Query: 158 QVQ* 147
+Q*
Sbjct: 203 YIQ* 192
Score = 156 bits (336), Expect = 2e-037
Identities = 80/124 (64%), Positives = 90/124 (72%)
Frame = +1 / +1
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 193 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 372
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTS 507
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL KS VS+MLTS
Sbjct: 373 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSKLLLXKSFKTVSMMLTS 552
Query: 508 HT*W 519
HT W
Sbjct: 553 HTWW 564
Score = 131 bits (281), Expect = 6e-030
Identities = 61/114 (53%), Positives = 80/114 (70%)
Frame = +3 / +3
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 216 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 395
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNADIPH 512
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVV +L R+++ADIPH
Sbjct: 396 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVXHGVQALVVXILQDRVDDADIPH 557
Score = 119 bits (255), Expect = 2e-026
Identities = 55/110 (50%), Positives = 70/110 (63%)
Frame = -1 / -1
Query: 519 PSRVGCQHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDLRERLCD* 340
P VGCQH+ +G +G QQE G+HG D+ +R +V R R LG+L++Q DLR+RL D
Sbjct: 564 PPXVGCQHHRHGLEGFXQQELGHHGXRPPDQPHRRLVRRCRSLGELRQQEGDLRKRLRDR 385
Query: 339 EHPLFLQLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
EH +QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 384 EHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 235
Score = 34.1 bits (68), Expect(2) = 5e-064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / -1
Query: 563 GNTITVHWYRRKAN 522
GNTITVH YRRKAN
Sbjct: 609 GNTITVHCYRRKAN 568
>gb|BG367597.1|BG367597 HVSMEi0012O03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012O03f, mRNA sequence
Length = 711
Score = 150 bits (323), Expect(3) = 5e-060
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 103 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 282
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 283 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 393
Score = 95.0 bits (201), Expect(3) = 5e-060
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHV 510
++ TESLMFLAHFVGDVHQP+H G DD GGNTI + WYR+K+NLHHV
Sbjct: 412 FDPTESLMFLAHFVGDVHQPMHCGHVDDLGGNTIKLRWYRKKSNLHHV 555
Score = 69.3 bits (145), Expect(3) = 2e-021
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 520 RFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSV 645
R F Y ++MVLPP SS+ P C GW TSPTKCARNIRLSV
Sbjct: 545 RLLFFLYHRSLMVLPPRSSTWPQCIGWCTSPTKCARNIRLSV 420
Score = 37.7 bits (76), Expect(3) = 2e-021
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1 / -2
Query: 679 SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
S +V*LL+APTTH +P WQS L LQ+ GV A
Sbjct: 392 SAAV*LLMAPTTHTFLFPLVSWQSLA*LNLQSPGVSA 282
Score = 33.1 bits (66), Expect(3) = 2e-021
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1 / -2
Query: 820 QRTWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHA 969
+R SAH HT T A R SAILQ M PS PHA
Sbjct: 251 KRWLSAHEHTSASSPLAHDGRSAFTPVNASLVRKPSAILQVM*CPSLPHA 102
Score = 24.9 bits (48), Expect(3) = 5e-060
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -2 / +2
Query: 476 DFYNKSMDTMVEALKMNLT 420
DF+++ D ++E+++ N+T
Sbjct: 593 DFFDQDQDPLIESIQRNIT 649
>gb|AV924725.1|AV924725 AV924725 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16l09 5', mRNA sequence
Length = 601
Score = 161 bits (347), Expect(4) = 2e-058
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
Y+ TESLMFLAHFVGDVHQPLH G DD GGNTI + WYRRK+NLHHVWD +I A+KD
Sbjct: 228 YDPTESLMFLAHFVGDVHQPLHCGHVDDLGGNTIKLRWYRRKSNLHHVWDSDVITQAMKD 407
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNK 372
F+N+ DTM+EA++ N+TD WS + WE C ++
Sbjct: 408 FFNRDQDTMIEAIQRNITDDWSSEEKQWEACGSR 509
Score = 98.7 bits (209), Expect(3) = 9e-023
Identities = 49/84 (58%), Positives = 53/84 (63%)
Frame = +1 / -1
Query: 403 SSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQWTVMVLPPSSSSK 582
S D SV AS MVS LL KS +A I SHT R FL Y ++MVLPP SS+
Sbjct: 478 SLDQSSVMLRWMASIMVSWSLLKKSFMACVITSESHTWCRLLFLLYHRSLMVLPPRSSTW 299
Query: 583 PTCSGWWTSPTKCARNIRLSVRLY 654
P CSGW TSPTKCARNIRLSV Y
Sbjct: 298 PQCSGWCTSPTKCARNIRLSVGSY 227
Score = 57.9 bits (120), Expect(4) = 2e-058
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -2 / +1
Query: 824 RWHYHWASPLHYANTPQVCNFKYSRDCHNSRGQQGMC 714
R+ Y W+SPLH+A+TP CNF Y+R +G+QG C
Sbjct: 61 RFRYRWSSPLHFADTPGDCNFSYARXLPRHQGEQGTC 171
Score = 33.6 bits (67), Expect(4) = 2e-058
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 734 RGQQGMCVVGAINNYTDQL 678
RG + +CVVGAINNYT L
Sbjct: 153 RGTRXVCVVGAINNYTAAL 209
Score = 29.9 bits (59), Expect(4) = 2e-058
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 881 LPESAGGELSTVCPWADQ 828
LP A GEL+ VC WA Q
Sbjct: 3 LPSWANGELAXVCAWAXQ 56
Score = 23.5 bits (45), Expect(3) = 9e-023
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 679 SWSV*LLIAPTTH 717
S +V*LL+APTTH
Sbjct: 208 SAAV*LLMAPTTH 170
Score = 22.6 bits (43), Expect(3) = 9e-023
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1 / -3
Query: 715 HIPCWPRELWQSREYLKLQTWGVLA*WSGL 804
H+PC P LKLQ+ GV A GL
Sbjct: 170 HVPCSPWCRGSXLA*LKLQSPGVSAKCRGL 81
>gb|BG365054.1|BG365054 HVSMEi0001A24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0001A24f, mRNA sequence
Length = 771
Score = 121 bits (258), Expect(4) = 1e-057
Identities = 43/90 (47%), Positives = 63/90 (70%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + +
Sbjct: 435 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAE 614
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWEN 384
Y K + + L+ N+T G D W++
Sbjct: 615 RYGKDIAAFRQDLQHNITKGSWSDESSWKD 704
Score = 75.3 bits (158), Expect(4) = 1e-057
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 102 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 263
Score = 55.6 bits (115), Expect(4) = 1e-057
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +3
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 303 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 416
Score = 29.0 bits (57), Expect(4) = 1e-057
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 255 YKYRWTSPLHFIDTP 299
>gb|BF257877.2|BF257877 HVSMEf0014B21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014B21f, mRNA sequence
Length = 572
Score = 162 bits (348), Expect(3) = 3e-057
Identities = 60/112 (53%), Positives = 78/112 (69%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
++ TESLMFLAHFVGDVH P+H DD GGNTI + WY RK+NLHHVWD +I A+KD
Sbjct: 71 FDQTESLMFLAHFVGDVHHPMHCSHVDDLGGNTIKLRWYTRKSNLHHVWDSDVITQAMKD 250
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCN 318
F++K D M+E+++ N+TD WS + WE C+ TCA YA ES +C+
Sbjct: 251 FFDKDQDAMIESIQRNITDDWSSEEKQWEACRIITTTCAEKYAQESAVLACD 406
Score = 86.3 bits (182), Expect(2) = 1e-021
Identities = 50/103 (48%), Positives = 55/103 (53%)
Frame = +1 / -3
Query: 337 LSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT* 516
LS A AQV + S S D SV S M S L KS +A I SHT
Sbjct: 387 LSWAYFSAQVVVMMRHASHCFSSLDQSSVMLRWMDSIMASWSLSKKSFMACVITSESHTW 208
Query: 517 WRFAFLRYQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSV 645
R FL Y ++MVLPP SS+ C GW TSPTKCARNIRLSV
Sbjct: 207 CRLLFLVYHRSLMVLPPRSST*LQCIGWCTSPTKCARNIRLSV 79
Score = 71.2 bits (149), Expect(3) = 3e-057
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = -2 / +2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQD TLGD+Y+F P+V+ RLAQ G+RLA +LNRIF G
Sbjct: 407 AYEGVEQDDTLGDEYYFKALPVVQMRLAQGGVRLAAILNRIFIG 538
Score = 37.3 bits (75), Expect(2) = 1e-021
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +1 / -3
Query: 184 PPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCST 303
P I L A+L P A+L T G LK SSPRV SCST
Sbjct: 537 PMKILLRIAASLTPP*ASLI*TTGSALK*YSSPRVSSCST 418
Score = 28.1 bits (55), Expect(3) = 3e-057
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 725 QGMCVVGAINNYTDQLYSY 669
+ +CVVGAIN+YT L +
Sbjct: 5 KNVCVVGAINDYTGALQDW 61
>gb|BI777481.2|BI777481 EBro04_SQ001_F17_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_F17 5', mRNA sequence
Length = 452
Score = 221 bits (477), Expect = 6e-057
Identities = 87/119 (73%), Positives = 105/119 (88%)
Frame = -2 / +1
Query: 503 VSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYS 324
VSIIDT +KDFYNKS+DTMV+AL+ NLT+GWSDD+ WE+C NK ATCANDYAIESI+ +
Sbjct: 1 VSIIDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKATCANDYAIESINLA 180
Query: 323 CNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGGGEADDIPLQVQ* 147
CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RLAL+LNRIF +AD +PL +Q*
Sbjct: 181 CNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLALILNRIFDKKKADAMPLYIQ* 357
Score = 147 bits (316), Expect = 9e-035
Identities = 76/118 (64%), Positives = 87/118 (73%)
Frame = +1 / -1
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 356 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 177
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIML 501
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMVS LLL*KS + VS+ML
Sbjct: 176 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMVSRLLL*KSFMTVSMML 3
Score = 124 bits (266), Expect = 7e-028
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 333 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 154
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHGIHALVVEVLDRRINNAD 503
VV AGR+ V A P D+V P+ ++ LE + HG+ ALVVEVL R+++AD
Sbjct: 153 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDAD 1
Score = 113 bits (242), Expect = 1e-024
Identities = 53/104 (50%), Positives = 68/104 (65%)
Frame = -1 / +3
Query: 501 QHY*YGDQGLLQQEHGYHGRGSQDESYRWMV*RHRPLGKLQEQTRDLRERLCD*EHPLFL 322
QH+ +G +GLLQQE +HGR D+ +R +V R R LG+L++Q DLR+RL D EH +
Sbjct: 3 QHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLRKRLRDREHKPGV 182
Query: 321 QLRLQRCGARHHSRR*LFFQ*VPDCGEEVSAGWNQIGVGT*SDI 190
QLR+QRCGA H+S R*L VP CGEE G Q + T DI
Sbjct: 183 QLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLDTQQDI 314
>gb|AV932404.1|AV932404 AV932404 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3i01 5', mRNA sequence
Length = 680
Score = 107 bits (229), Expect(4) = 6e-054
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + +
Sbjct: 494 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAE 673
Query: 473 FY 468
Y
Sbjct: 674 RY 679
Score = 75.8 bits (159), Expect(4) = 6e-054
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 161 AWSAEGHMLTCQIAQDLLEPAAAXAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 322
Score = 55.6 bits (115), Expect(4) = 6e-054
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 362 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 475
Score = 29.0 bits (57), Expect(4) = 6e-054
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 314 YKYRWTSPLHFIDTP 358
>gb|BM374816.1|BM374816 EBma05_SQ002_P04_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_P04 5', mRNA sequence
Length = 633
Score = 105 bits (225), Expect(4) = 3e-053
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + +
Sbjct: 449 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAE 628
Score = 75.3 bits (158), Expect(4) = 3e-053
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 116 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 277
Score = 55.6 bits (115), Expect(4) = 3e-053
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 317 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 430
Score = 29.0 bits (57), Expect(4) = 3e-053
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 269 YKYRWTSPLHFIDTP 313
>gb|BG310017.1|BG310017 HVSMEc0016B05f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016B05f, mRNA sequence
Length = 823
Score = 97.7 bits (207), Expect(4) = 2e-050
Identities = 31/49 (63%), Positives = 43/49 (87%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVW 507
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+NLHHVW
Sbjct: 437 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLLWFKHKSNLHHVW 583
Score = 75.3 bits (158), Expect(4) = 2e-050
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 104 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 265
Score = 54.7 bits (113), Expect(4) = 2e-050
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 305 KACTFDYARDCHDPSGAKDMCVGGAVXNFTSQLMHYKQ 418
Score = 29.0 bits (57), Expect(4) = 2e-050
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 257 YKYRWTSPLHFIDTP 301
>gb|CA031460.1|CA031460 HX10A17r HX Hordeum vulgare subsp. vulgare cDNA clone HX10A17
5-PRIME, mRNA sequence
Length = 635
Score = 145 bits (312), Expect(2) = 8e-050
Identities = 55/97 (56%), Positives = 70/97 (72%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ +A+AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 162 AWGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWAVGELAAACSWPDAVRRQMPWSGSLHF 341
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH ++G++ MCVVG INNYT L
Sbjct: 342 ADTPGDCKFSYARDCHGTKGEKDMCVVGGINNYTAAL 452
Score = 72.1 bits (151), Expect(2) = 8e-050
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWY 537
YN TESL+FL+HF+GD+HQP+H G D GGNTI V WY
Sbjct: 471 YNRTESLLFLSHFLGDIHQPMHCGRTADLGGNTIVVTWY 587
Score = 71.6 bits (150), Expect(3) = 1e-023
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1 / -2
Query: 538 YQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLY 654
YQ T MVLPP S+ +P C GWW SP KC RN RLSVRLY
Sbjct: 586 YQVTTMVLPPRSAVRPQCMGWWMSPRKCDRNSRLSVRLY 470
Score = 42.3 bits (86), Expect(3) = 1e-023
Identities = 22/50 (44%), Positives = 23/50 (46%)
Frame = +1 / -2
Query: 820 QRTWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHA 969
+RT S H H TAA A R SAILQ M WPS PHA
Sbjct: 310 RRTASGHEHAAASSPTAHSGRSPFTAADASPVRKPSAILQVM*WPSSPHA 161
Score = 34.1 bits (68), Expect(3) = 1e-023
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1 / -2
Query: 685 SV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
+V*LL+ PTTH+ P WQS L LQ+ GV A
Sbjct: 445 AV*LLMPPTTHMSFSPFVPWQSLA*LNLQSPGVSA 341
>gb|BI959427.1|BI959427 HVSMEn0019J24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019J24f, mRNA sequence
Length = 671
Score = 143 bits (306), Expect(2) = 5e-049
Identities = 54/97 (55%), Positives = 68/97 (70%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ + AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 116 AWGEEGHYMTCKIAEGFLTGEGWAAVKGLLPEWADGELAAACSWPDAVRRQMPWSGSLHF 295
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH ++G++ MCVVG INNYT L
Sbjct: 296 ADTPGDCKFSYARDCHGTKGEKDMCVVGGINNYTAAL 406
Score = 72.1 bits (151), Expect(2) = 5e-049
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWY 537
YN TESL+FL+HF+GD+HQP+H G D GGNTI V WY
Sbjct: 425 YNRTESLLFLSHFLGDIHQPMHCGRTADLGGNTIVVTWY 541
Score = 71.6 bits (150), Expect(3) = 5e-023
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1 / -3
Query: 538 YQWTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLY 654
YQ T MVLPP S+ +P C GWW SP KC RN RLSVRLY
Sbjct: 540 YQVTTMVLPPRSAVRPQCMGWWMSPRKCDRNSRLSVRLY 424
Score = 40.0 bits (81), Expect(3) = 5e-023
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +1 / -3
Query: 820 QRTWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHA 969
+RT S H H TAA R SAILQ M WPS PHA
Sbjct: 264 RRTASGHEHAAASSPSAHSGRSPFTAAHPSPVRKPSAILQVM*WPSSPHA 115
Score = 34.1 bits (68), Expect(3) = 5e-023
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1 / -3
Query: 685 SV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA 789
+V*LL+ PTTH+ P WQS L LQ+ GV A
Sbjct: 399 AV*LLMPPTTHMSFSPFVPWQSLA*LNLQSPGVSA 295
>gb|CB881631.1|CB881631 HM10G14w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G14
3-PRIME, mRNA sequence
Length = 480
Score = 187 bits (402), Expect = 1e-046
Identities = 73/102 (71%), Positives = 89/102 (87%)
Frame = -2 / -3
Query: 452 TMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDD 273
TMV+AL+ NLT+GWSDD+ WE+C NK ATCANDYAIESI+ +CNYAYKDV Q+ITLGDD
Sbjct: 478 TMVDALQTNLTEGWSDDVGRWESCANKKATCANDYAIESINLACNYAYKDVVQNITLGDD 299
Query: 272 YFFSRYPIVEKRLAQAGIRLALVLNRIFGGGEADDIPLQVQ* 147
Y+ +RYP+VEKRLAQAG+RLAL+LNRIF +AD +PL +Q*
Sbjct: 298 YYLTRYPVVEKRLAQAGVRLALILNRIFDKKKADAMPLYIQ* 173
Score = 127 bits (272), Expect = 1e-028
Identities = 65/102 (63%), Positives = 74/102 (72%)
Frame = +1 / +3
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 174 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 353
Query: 328 *WMLSIA*SFAQVACLFLQFSQWTMSSDHPSVRFILRASTMV 453
+MLSIA*SFAQVA L Q SQ SSD PSVR + RASTMV
Sbjct: 354 RFMLSIA*SFAQVAFLLAQLSQRPTSSDQPSVRLVWRASTMV 479
Score = 102 bits (217), Expect = 4e-021
Identities = 50/94 (53%), Positives = 64/94 (68%)
Frame = +3 / +2
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 197 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 376
Query: 351 VVRAGRVFVLAIFPVDDVVRPSICKIHLESLYHG 452
VV AGR+ V A P D+V P+ ++ LE + HG
Sbjct: 377 VVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHG 478
>gb|CA010720.1|CA010720 HT08N17u HT Hordeum vulgare subsp. vulgare cDNA clone HT08N17
3-PRIME, mRNA sequence
Length = 547
Score = 153 bits (328), Expect(3) = 3e-046
Identities = 60/82 (73%), Positives = 72/82 (87%)
Frame = -2 / -1
Query: 392 WENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRL 213
WE+C NK ATCANDYAIESI+ +CNYAYKDV Q+ITLGDDY+ +RYP+VEKRLAQAG+RL
Sbjct: 433 WESCANKKATCANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRL 254
Query: 212 ALVLNRIFGGGEADDIPLQVQ* 147
AL+LNRIF +AD +PL +Q*
Sbjct: 253 ALILNRIFDKKKADAMPLYIQ* 188
Score = 101 bits (215), Expect(2) = 7e-026
Identities = 52/82 (63%), Positives = 60/82 (73%)
Frame = +1 / +3
Query: 148 YCTCSGISSASPPPNIRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL*A*LQE 327
YC +GI+SA NI LS A+L PACA+LFST GY ++ *SSPRVM C+TSL A*L
Sbjct: 189 YCMYNGIASAFFLSNILLSIKASLTPACASLFSTTGYRVR**SSPRVMFCTTSLYA*LHA 368
Query: 328 *WMLSIA*SFAQVACLFLQFSQ 393
+MLSIA*SFAQVA L Q SQ
Sbjct: 369 RFMLSIA*SFAQVAFLLAQLSQ 434
Score = 84.9 bits (179), Expect(2) = 1e-020
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = +3 / +2
Query: 171 IRFTSTKYPIKYQRQSDSSLR*PLLHNRVPTEKIIIS*SDVLLHIFVGVVAGIMDALNRI 350
I F KYP++YQ +SD+ L LLHNRVP E IIIS S+VL HIFV VVA + AL+R+
Sbjct: 212 ICFLLVKYPVEYQGESDAGLCQSLLHNRVPGEVIIISQSNVLHHIFVCVVARQVYALDRV 391
Query: 351 VVRAGRVFVLAIFP 392
VV AGR+ V A P
Sbjct: 392 VVCAGRLLVGAALP 433
Score = 48.7 bits (100), Expect(3) = 3e-046
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -2 / -1
Query: 503 VSIIDTAIKDFYNKSMDTMVEALK 432
VSIIDT +KDFYNKS+DTMV+AL+
Sbjct: 547 VSIIDTVMKDFYNKSLDTMVDALQ 476
Score = 36.3 bits (73), Expect(2) = 7e-026
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 423 KIHLESLYHGIHALVVEVLDRRINNAD 503
++ LE + HG+ ALVVEVL R+++AD
Sbjct: 467 RLXLEGVDHGVEALVVEVLHDRVDDAD 547
Score = 35.4 bits (71), Expect(2) = 1e-020
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 436 RASTMVSMLLL*KSLIAVSIML 501
RASTMVS LLL*KS + VS+ML
Sbjct: 480 RASTMVSRLLL*KSFMTVSMML 545
Score = 22.6 bits (43), Expect(3) = 3e-046
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 422 TDGWSDDI 399
T+GWSDD+
Sbjct: 464 TEGWSDDV 441
>gb|BJ469034.1|BJ469034 BJ469034 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12l02 5', mRNA sequence
Length = 632
Score = 80.3 bits (169), Expect(4) = 1e-045
Identities = 25/43 (58%), Positives = 37/43 (86%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKA 525
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+
Sbjct: 504 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHKS 632
Score = 75.3 bits (158), Expect(4) = 1e-045
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 171 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 332
Score = 55.6 bits (115), Expect(4) = 1e-045
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +3
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 372 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 485
Score = 29.0 bits (57), Expect(4) = 1e-045
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 324 YKYRWTSPLHFIDTP 368
>gb|BJ472010.1|BJ472010 BJ472010 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31d12 5', mRNA sequence
Length = 619
Score = 79.9 bits (168), Expect(4) = 1e-045
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRK 528
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K
Sbjct: 494 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHK 619
Score = 75.3 bits (158), Expect(4) = 1e-045
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 161 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 322
Score = 55.6 bits (115), Expect(4) = 1e-045
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 362 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 475
Score = 29.0 bits (57), Expect(4) = 1e-045
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 314 YKYRWTSPLHFIDTP 358
>gb|AV935264.1|AV935264 AV935264 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3i01 3', mRNA sequence
Length = 735
Score = 126 bits (270), Expect(2) = 3e-045
Identities = 45/91 (49%), Positives = 64/91 (70%)
Frame = -2 / -2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + +
Sbjct: 731 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAE 552
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIVHWENC 381
Y K M + L+ N+T G D W++C
Sbjct: 551 RYGKDMAAFRKDLQHNITKGSWSDESSWKDC 459
Score = 76.2 bits (160), Expect(2) = 3e-045
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -2 / -2
Query: 365 TCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFG 186
+C YA ESI +C + Y V TL ++YF SR PIV +R+AQ G+RLA+ LNR FG
Sbjct: 446 SCPTKYATESIGLACKWGYDGVHDGDTLSEEYFASRLPIVTRRIAQGGVRLAMFLNRAFG 267
Query: 185 GGEA 174
+A
Sbjct: 266 DHKA 255
>gb|BF620729.3|BF620729 HVSMEc0020L05f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020L05f, mRNA sequence
Length = 804
Score = 162 bits (348), Expect(2) = 7e-045
Identities = 68/105 (64%), Positives = 79/105 (75%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG EGHIMVCK+AE+YLS AAAAV LL +SAG L TVC AD + + Y AS L +
Sbjct: 175 AWG*EGHIMVCKVAERYLSXDAAAAVH*LLXDSAGVVLFTVCSCADSIWFLYFLASSLLF 354
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTS 654
+ TP CNF +SRDC NSRG+QGMCVVGA NNYTDQLY+YG +S
Sbjct: 355 SYTPYFCNFVFSRDCXNSRGEQGMCVVGAFNNYTDQLYTYGDSSS 489
Score = 122 bits (261), Expect(2) = 2e-031
Identities = 66/123 (53%), Positives = 71/123 (57%)
Frame = +1 / -2
Query: 667 P*L*SWSV*LLIAPTTHIPCWPRELWQSREYLKLQTWGVLA*WSGLAQW*CQRTWSAHGH 846
P*+*SWSV*LL APTTHIPC PREL QSRE KLQ GV S LA+ + SA
Sbjct: 476 P*V*SWSV*LLKAPTTHIPCSPRELXQSREKTKLQK*GV*EKRSELAKKYRNQIESAQEQ 297
Query: 847 TVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPHAPXXXXXXXXXXKTSGNRSS 1026
TV CTAAAA DRY SA LQTMMWPS P A +T +RSS
Sbjct: 296 TVNSTTPAESXSS*CTAAAASXDRYLSATLQTMMWPS*PQASARRGAEAASRETRSSRSS 117
Query: 1027 ARC 1035
A C
Sbjct: 116 AGC 108
Score = 39.1 bits (79), Expect(2) = 7e-045
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2 / +1
Query: 662 KTSYNLTESLMFLAHFVGDVHQPLHVGF 579
K+SYNLTE LMFL HF V PL GF
Sbjct: 490 KSSYNLTEILMFLLHFFLFVLLPLFFGF 573
Score = 33.6 bits (67), Expect(2) = 2e-031
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1 / -2
Query: 580 KPTCSGWWTSPTKCARNIRLSVRLYEVF 663
KP G T+ KC RN+R+SVRL E+F
Sbjct: 572 KPKKRGKRTNKKKCNRNMRISVRL*ELF 489
>gb|BE060618.3|BE060618 HVSMEg0012M16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012M16f, mRNA sequence
Length = 715
Score = 143 bits (307), Expect(2) = 5e-044
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ +A+AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 133 AWGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWADGELAAACSWPDAVRRQMPWSGSLHF 312
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYT 687
A+TP C F Y+RDCH ++G++ MCVV +INNYT
Sbjct: 313 ADTPGDCKFSYARDCHGTKGEKDMCVVXSINNYT 414
Score = 55.1 bits (114), Expect(2) = 5e-044
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTI 552
YN TESL+ L+HF+GD HQP+H G D GG TI
Sbjct: 442 YNPTESLLXLSHFLGDXHQPMHCGRTXDLGGTTI 543
>gb|BF255497.2|BF255497 HVSMEf0007A08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007A08f, mRNA sequence
Length = 881
Score = 149 bits (321), Expect(2) = 3e-042
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 100 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 279
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYT 687
A+TP C F YSRDCH+++G + +CVVGAINN+T
Sbjct: 280 ADTPGDCKFSYSRDCHDTKGNKNVCVVGAINNFT 381
Score = 42.8 bits (87), Expect(2) = 3e-042
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / +2
Query: 638 SLMFLAHFVGDVHQPLHVG 582
+L FLAHFVGDVHQP+H G
Sbjct: 425 ALCFLAHFVGDVHQPMHCG 481
>gb|BM444365.1|BM444365 EBem09_SQ004_P02_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_P02 5', mRNA sequence
Length = 427
Score = 146 bits (313), Expect(2) = 4e-042
Identities = 55/97 (56%), Positives = 69/97 (71%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ +A+AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 55 AWGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWADGELAAACSWPDAVRRQMPWSGSLHF 234
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH ++G+ MCVVG INNYT L
Sbjct: 235 ADTPGDCKFSYARDCHGTKGENDMCVVGGINNYTAAL 345
Score = 46.0 bits (94), Expect(2) = 4e-042
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPL 591
YN TESL+FL+HF+GD+HQP+
Sbjct: 364 YNRTESLLFLSHFLGDIHQPM 426
>gb|AV932814.1|AV932814 AV932814 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d06 5', mRNA sequence
Length = 634
Score = 75.3 bits (158), Expect(4) = 5e-042
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
AW EGH++ C+IA+ L AA AV+ LLPE AGG+LS +C W DQVR Y +
Sbjct: 173 AWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKY 334
Score = 68.0 bits (142), Expect(4) = 5e-042
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGN 558
YNLTE+L+FL+HF+GD+HQP+HVGF D GGN
Sbjct: 506 YNLTEALLFLSHFMGDIHQPMHVGFTSDMGGN 601
Score = 55.6 bits (115), Expect(4) = 5e-042
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 776 QVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQ 663
+ C F Y+RDCH+ G + MCV GA+ N+T QL Y Q
Sbjct: 374 KACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQ 487
Score = 29.0 bits (57), Expect(4) = 5e-042
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 326 YKYRWTSPLHFIDTP 370
>gb|BQ470652.1|BQ470652 HX03J22r HX Hordeum vulgare subsp. vulgare cDNA clone HX03J22
5-PRIME, mRNA sequence
Length = 480
Score = 145 bits (312), Expect(2) = 5e-042
Identities = 55/97 (56%), Positives = 70/97 (72%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ +A+AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 108 AWGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWAVGELAAACSWPDAVRRQMPWSGSLHF 287
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH ++G++ MCVVG INNYT L
Sbjct: 288 ADTPGDCKFSYARDCHGTKGEKDMCVVGGINNYTAAL 398
Score = 46.0 bits (94), Expect(2) = 5e-042
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPL 591
YN TESL+FL+HF+GD+HQP+
Sbjct: 417 YNRTESLLFLSHFLGDIHQPM 479
>gb|BI779631.2|BI779631 EBro01_SQ004_K02_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_K02 5', mRNA sequence
Length = 474
Score = 150 bits (323), Expect(2) = 1e-041
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +3
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 111 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 290
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 291 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 401
Score = 39.6 bits (80), Expect(2) = 1e-041
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVH 600
++ TESLMFLAHFVGDVH
Sbjct: 420 FDPTESLMFLAHFVGDVH 473
>gb|BM443141.2|BM443141 EBro02_SQ002_N03_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_N03 5', mRNA sequence
Length = 466
Score = 150 bits (323), Expect(2) = 1e-041
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 103 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 282
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 283 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 393
Score = 39.6 bits (80), Expect(2) = 1e-041
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVH 600
++ TESLMFLAHFVGDVH
Sbjct: 412 FDPTESLMFLAHFVGDVH 465
>gb|BQ754685.1|BQ754685 EBed01_SQ003_I09_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_I09 5', mRNA sequence
Length = 370
Score = 167 bits (359), Expect = 1e-040
Identities = 63/122 (51%), Positives = 82/122 (67%)
Frame = -2 / +2
Query: 593 LHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDG 414
LHVGF D+GGNTI VHWYRRK LHH+WDV+II TA KD+Y++ V+AL ++
Sbjct: 2 LHVGFASDKGGNTIDVHWYRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGA 181
Query: 413 WSDDIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRL 234
W D + WE C C++ Y ESI +C+ AYK+V + TLGD+YF SR P+V+ RL
Sbjct: 182 WLDKVQEWEECAKNQTACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLPVVKLRL 361
Query: 233 AQ 228
AQ
Sbjct: 362 AQ 367
>gb|AV929820.1|AV929820 AV929820 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16l09 3', mRNA sequence
Length = 688
Score = 108 bits (231), Expect(2) = 4e-039
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = -2 / -1
Query: 575 DDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIV 396
DD GGNTI + WY RK+NLHHVWD +I A+KDF+N+ DTM+EA++ N+TD WS +
Sbjct: 685 DDLGGNTIKLRWYXRKSNLHHVWDSDVITQAMKDFFNRDQDTMIEAIQRNITDDWSSEEK 506
Query: 395 HWENCKNK 372
WE C ++
Sbjct: 505 QWEACGSR 482
Score = 73.5 bits (154), Expect(2) = 4e-039
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / -1
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQ TLGDDY+F P+VEKR+AQ G+RLA++LN+IF G
Sbjct: 424 AYEGVEQGDTLGDDYYFRALPVVEKRIAQGGVRLAVILNQIFSG 293
>gb|CA022655.1|CA022655 HZ43P13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43P13
5-PRIME, mRNA sequence
Length = 436
Score = 150 bits (323), Expect(2) = 1e-038
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -2 / +1
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWGKEGH M CKIA+ +L+ +A V+ALLP A GEL+ VC WAD R+ Y W+ LH+
Sbjct: 94 AWGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRYRWSRSLHF 273
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH+++G + +CVVGAINNYT L
Sbjct: 274 ADTPGDCKFSYARDCHDTKGNKNVCVVGAINNYTAAL 384
Score = 29.5 bits (58), Expect(2) = 1e-038
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 654 V*PDGEPDVPG 622
+*PDGEPDVPG
Sbjct: 402 I*PDGEPDVPG 434
>gb|BM375587.2|BM375587 EBem06_SQ003_M19_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_M19 5', mRNA sequence
Length = 423
Score = 141 bits (302), Expect(2) = 3e-038
Identities = 53/97 (54%), Positives = 68/97 (70%)
Frame = -2 / +2
Query: 968 AWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHY 789
AWG+EGH M CKIAE +L+ +A+AAV+ LLPE A GEL+ C W D VR W+ LH+
Sbjct: 59 AWGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWADGELAAACSWPDAVRRQMPWSGSLHF 238
Query: 788 ANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQL 678
A+TP C F Y+RDCH ++G++ MCV INNYT L
Sbjct: 239 ADTPGDCKFSYARDCHGTKGEKDMCVXXGINNYTAAL 349
Score = 38.2 bits (77), Expect(2) = 3e-038
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -2 / +2
Query: 653 YNLTESLMFLAHFVGDVH 600
YN T+SL+FL+HF+GD+H
Sbjct: 368 YNRTDSLLFLSHFLGDIH 421
>gb|BJ473467.1|BJ473467 BJ473467 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12l02 3', mRNA sequence
Length = 768
Score = 102 bits (217), Expect(2) = 5e-038
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -2
Query: 617 FVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEA 438
F+GD+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + + Y K M +
Sbjct: 695 FMGDIHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAERYGKDMAAFRKD 516
Query: 437 LKMNLTDGWSDDIVHWENC 381
L+ N+T G D W++C
Sbjct: 515 LQHNITKGSWSDESSWKDC 459
Score = 76.2 bits (160), Expect(2) = 5e-038
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -2 / -2
Query: 365 TCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFG 186
+C YA ESI +C + Y V TL ++YF SR PIV +R+AQ G+RLA+ LNR FG
Sbjct: 446 SCPTKYATESIGLACKWGYDGVHDGDTLSEEYFASRLPIVTRRIAQGGVRLAMFLNRAFG 267
Query: 185 GGEA 174
+A
Sbjct: 266 DHKA 255
>gb|BM372422.2|BM372422 EBro03_SQ004_O15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_O15 5', mRNA sequence
Length = 565
Score = 110 bits (235), Expect(2) = 5e-038
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = -2 / +1
Query: 548 VHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKH 369
+ WYRRK+NLHHVWD +I +KDF++K D M+E+++ N+TD WS + WE C++K
Sbjct: 1 LRWYRRKSNLHHVWDSDVITQTMKDFFDKDQDAMIESIQRNITDDWSSEEKQWETCRSKT 180
Query: 368 ATCANDYAIESIHYSCN 318
TCA YA ES +C+
Sbjct: 181 TTCAEKYAQESAVLACD 231
Score = 68.0 bits (142), Expect(2) = 5e-038
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -2 / +1
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQD TLGD+Y+F P+V+KR G+RLA +LNRIF G
Sbjct: 232 AYEGVEQDDTLGDEYYFKALPVVQKRARPGGVRLAAILNRIFXG 363
>gb|AV935442.1|AV935442 AV935442 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d06 3', mRNA sequence
Length = 684
Score = 93.6 bits (198), Expect(2) = 2e-035
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = -2 / -2
Query: 605 VHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMN 426
+HQP+HVGF D GGN++ + W++ K+NLHHVWD II T + + Y K M + L+ N
Sbjct: 683 IHQPMHVGFTSDMGGNSVNLRWFKHKSNLHHVWDREIILTVLAERYGKDMAAFRKDLQHN 504
Query: 425 LTDGWSDDIVHWENC 381
+T G D W++C
Sbjct: 503 ITKGSWSDESSWKDC 459
Score = 76.2 bits (160), Expect(2) = 2e-035
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -2 / -2
Query: 365 TCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFG 186
+C YA ESI +C + Y V TL ++YF SR PIV +R+AQ G+RLA+ LNR FG
Sbjct: 446 SCPTKYATESIGLACKWGYDGVHDGDTLSEEYFASRLPIVTRRIAQGGVRLAMFLNRAFG 267
Query: 185 GGEA 174
+A
Sbjct: 266 DHKA 255
>gb|BJ454144.1|BJ454144 BJ454144 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46f01 5', mRNA sequence
Length = 621
Score = 95.5 bits (202), Expect(2) = 4e-035
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2 / +2
Query: 548 VHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNK 372
+ WYRRK+NLHHVWD +I A+KDF+N+ DTM+EA++ N+TD WS + WE C ++
Sbjct: 2 LRWYRRKSNLHHVWDSDVITQAMKDFFNRDQDTMIEAIQRNITDDWSSEEKQWEACGSR 178
Score = 73.5 bits (154), Expect(2) = 4e-035
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / +2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQ TLGDDY+F P+VEKR+AQ G+RLA++LN+IF G
Sbjct: 236 AYEGVEQGDTLGDDYYFRALPVVEKRIAQGGVRLAVILNQIFSG 367
>gb|BJ461676.1|BJ461676 BJ461676 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46f01 3', mRNA sequence
Length = 617
Score = 95.5 bits (202), Expect(2) = 4e-035
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2 / -2
Query: 548 VHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNK 372
+ WYRRK+NLHHVWD +I A+KDF+N+ DTM+EA++ N+TD WS + WE C ++
Sbjct: 616 LRWYRRKSNLHHVWDSDVITQAMKDFFNRDQDTMIEAIQRNITDDWSSEEKQWEACGSR 440
Score = 73.5 bits (154), Expect(2) = 4e-035
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / -2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQ TLGDDY+F P+VEKR+AQ G+RLA++LN+IF G
Sbjct: 382 AYEGVEQGDTLGDDYYFRALPVVEKRIAQGGVRLAVILNQIFSG 251
>gb|BJ457937.1|BJ457937 BJ457937 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29p24 3', mRNA sequence
Length = 620
Score = 90.0 bits (190), Expect(2) = 2e-033
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = -2 / -2
Query: 539 YRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNK 372
YRRK+NLHHVWD +I A+KDF+N+ DTM+EA++ N+TD WS + WE C ++
Sbjct: 619 YRRKSNLHHVWDSDVITQAMKDFFNRDQDTMIEAIQRNITDDWSSEEKQWEACGSR 452
Score = 73.5 bits (154), Expect(2) = 2e-033
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -2 / -2
Query: 314 AYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGG 183
AY+ VEQ TLGDDY+F P+VEKR+AQ G+RLA++LN+IF G
Sbjct: 394 AYEGVEQGDTLGDDYYFRALPVVEKRIAQGGVRLAVILNQIFSG 263
>gb|AL500474.1|AL500474 AL500474 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06M13r 3', mRNA sequence
Length = 424
Score = 131 bits (281), Expect = 6e-030
Identities = 53/74 (71%), Positives = 63/74 (85%)
Frame = -2 / -3
Query: 368 ATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIF 189
ATCANDYAIESI+ CNYAYKDV Q+IT GDDY+ +RYP+V KRLAQAG+RLAL+LNRIF
Sbjct: 422 ATCANDYAIESINLXCNYAYKDVVQNITXGDDYYLTRYPVVXKRLAQAGVRLALILNRIF 243
Query: 188 GGGEADDIPLQVQ* 147
+AD +PL +Q*
Sbjct: 242 DKKKADAMPLYIQ* 201
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 444,025,655
Number of Sequences: 312970
Number of extensions: 7165593
Number of successful extensions: 77339
Number of sequences better than 1.0e-020: 78
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12841640395
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)