TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716352.2.1
(990 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU998475.1|BU998475 HI11C23r HI Hordeum vulgare subsp. v... 144 4e-044
gb|BU999809.1|BU999809 HI15O09r HI Hordeum vulgare subsp. v... 144 6e-044
gb|BF262024.2|BF262024 HV_CEa0002N17f Hordeum vulgare seedl... 144 1e-043
gb|BG301140.1|BG301140 HVSMEb0019L03f Hordeum vulgare seedl... 144 1e-043
gb|BM375524.2|BM375524 EBem06_SQ003_J16_R embryo, 21 DPA, n... 144 1e-043
gb|BU999425.1|BU999425 HI14H13r HI Hordeum vulgare subsp. v... 144 2e-043
gb|BU981088.1|BU981088 HA22J18r HA Hordeum vulgare subsp. v... 144 3e-043
gb|BI780514.2|BI780514 EBem08_SQ001_K14_R embryo, 40 DPA, n... 143 3e-043
gb|BF629048.2|BF629048 HVSMEb0009K20f Hordeum vulgare seedl... 144 4e-043
gb|BG343608.1|BG343608 HVSMEg0006A07f Hordeum vulgare pre-a... 144 5e-043
gb|BE231114.2|BE231114 HVSMEg0016N01f Hordeum vulgare pre-a... 144 5e-043
gb|BJ453522.1|BJ453522 BJ453522 K. Sato unpublished cDNA li... 144 5e-043
gb|BM370309.2|BM370309 EBro08_SQ003_M20_R root, 3 week, dro... 144 5e-043
gb|BM370561.2|BM370561 EBro08_SQ004_J15_R root, 3 week, dro... 144 5e-043
gb|AL509144.1|AL509144 AL509144 Hordeum vulgare Barke devel... 144 5e-043
gb|BU976484.1|BU976484 HA03M13r HA Hordeum vulgare subsp. v... 144 5e-043
gb|BU978152.1|BU978152 HA12K16r HA Hordeum vulgare subsp. v... 144 5e-043
gb|BU982679.1|BU982679 HA27E15r HA Hordeum vulgare subsp. v... 144 5e-043
gb|BQ471702.1|BQ471702 HV03D11r HV Hordeum vulgare subsp. v... 144 5e-043
gb|BU989672.1|BU989672 HF22G04r HF Hordeum vulgare subsp. v... 144 5e-043
gb|BM377503.2|BM377503 EBem04_SQ003_F08_R embryo, 12 DPA, n... 144 5e-043
gb|CA023990.1|CA023990 HZ48A20r HZ Hordeum vulgare subsp. v... 144 5e-043
gb|BQ755111.1|BQ755111 EBed02_SQ003_M03_R endosperm, 8 DPA,... 144 5e-043
gb|BU996297.1|BU996297 HM13C17r HM Hordeum vulgare subsp. v... 144 5e-043
gb|BM376493.2|BM376493 EBem05_SQ002_G04_R embryo, 14 DPA, n... 144 5e-043
gb|BM098998.2|BM098998 EBpi05_SQ002_K14_R pistil, 8 DPA, no... 144 5e-043
gb|AL505139.1|AL505139 AL505139 Hordeum vulgare Barke roots... 144 7e-043
gb|CA023278.1|CA023278 HZ45M01r HZ Hordeum vulgare subsp. v... 141 1e-042
gb|BQ762387.1|BQ762387 EBro01_SQ005_N15 _R root, 3 week, hy... 144 1e-042
gb|BQ763259.1|BQ763259 EBro02_SQ007_P18_R root, 3 week, hyd... 144 1e-042
gb|BE060883.3|BE060883 HVSMEg0013L11f Hordeum vulgare pre-a... 139 3e-042
gb|BF065586.1|BF065586 HV_CEb0012N15f Hordeum vulgare seedl... 142 3e-042
gb|BQ753625.1|BQ753625 EBan01_SQ004_M15_R anther, yellow st... 141 9e-042
gb|BQ469633.1|BQ469633 HZ01G11r HZ Hordeum vulgare subsp. v... 144 9e-042
gb|BF264077.3|BF264077 HV_CEa0008H13f Hordeum vulgare seedl... 138 3e-041
gb|BF257818.2|BF257818 HVSMEf0013O18f Hordeum vulgare seedl... 137 4e-041
gb|BG368461.1|BG368461 HVSMEi0019B01f Hordeum vulgare 20 DA... 144 2e-040
gb|BG344945.2|BG344945 HVSMEg0018A02f Hordeum vulgare pre-a... 138 5e-040
gb|BU996923.1|BU996923 HI06E18r HI Hordeum vulgare subsp. v... 144 1e-039
gb|BQ762398.1|BQ762398 EBro01_SQ005_P15_R root, 3 week, hyd... 87 4e-039
gb|CA032937.1|CA032937 HX14K06r HX Hordeum vulgare subsp. v... 144 7e-039
gb|BE060141.3|BE060141 HVSMEg0011A10f Hordeum vulgare pre-a... 119 2e-038
gb|BE411073.1|BE411073 ISC002.A11F990322 ITEC ISC Barley Le... 144 2e-038
gb|CB858507.1|CB858507 HI07E19w HI Hordeum vulgare subsp. v... 144 3e-037
gb|BQ762001.1|BQ762001 EBpi01_SQ005_C18_R pistil, 1 DPA, no... 75 2e-036
gb|BM369784.2|BM369784 EBem07_SQ004_J16_R embryo, 28 DPA, n... 118 5e-036
gb|BU976485.1|BU976485 HA03M13u HA Hordeum vulgare subsp. v... 144 7e-036
gb|BM375452.2|BM375452 EBem06_SQ003_G07_R embryo, 21 DPA, n... 117 1e-035
gb|BM369618.2|BM369618 EBem07_SQ004_C08_R embryo, 28 DPA, n... 114 1e-034
gb|BJ461068.1|BJ461068 BJ461068 K. Sato unpublished cDNA li... 144 1e-033
gb|BJ463423.1|BJ463423 BJ463423 K. Sato unpublished cDNA li... 141 5e-033
gb|CA009104.1|CA009104 HU13C24r HU Hordeum vulgare subsp. v... 111 7e-033
gb|BQ753943.1|BQ753943 EBca01_SQ002_E23_R carpel, pre-anthe... 104 3e-031
gb|CA029188.1|CA029188 HZ64H14r HZ Hordeum vulgare subsp. v... 99 1e-029
gb|BF262055.3|BF262055 HV_CEa0002P01f Hordeum vulgare seedl... 130 1e-029
gb|BQ468767.1|BQ468767 HM02E15r HM Hordeum vulgare subsp. v... 127 1e-028
gb|BI950215.1|BI950215 HVSMEl0019K03f Hordeum vulgare spike... 123 2e-027
gb|BF617538.3|BF617538 HVSMEc0017O04f Hordeum vulgare seedl... 118 7e-027
gb|CA020711.1|CA020711 HZ37E17r HZ Hordeum vulgare subsp. v... 118 7e-027
gb|BE215918.2|BE215918 HV_CEb0008N12f Hordeum vulgare seedl... 118 7e-027
gb|BQ459489.1|BQ459489 HA08P01r HA Hordeum vulgare subsp. v... 118 7e-027
gb|BJ464811.1|BJ464811 BJ464811 K. Sato unpublished cDNA li... 117 1e-026
gb|BU999391.1|BU999391 HI14F24r HI Hordeum vulgare subsp. v... 119 1e-026
gb|BQ762699.1|BQ762699 EBro02_SQ004_E20_R root, 3 week, hyd... 119 2e-026
gb|BU999319.1|BU999319 HI14C10r HI Hordeum vulgare subsp. v... 119 2e-026
gb|BU995403.1|BU995403 HM10C12r HM Hordeum vulgare subsp. v... 118 5e-026
gb|BF064835.2|BF064835 HV_CEb0019M17f Hordeum vulgare seedl... 116 1e-025
gb|BF628294.2|BF628294 HVSMEb0003K10f Hordeum vulgare seedl... 116 2e-025
gb|BI960101.1|BI960101 HVSMEn0023E01f Hordeum vulgare rachi... 116 2e-025
gb|BM368849.2|BM368849 EBem08_SQ004_M10_R embryo, 40 DPA, n... 116 2e-025
gb|BF625909.2|BF625909 HVSMEa0014D19f Hordeum vulgare seedl... 116 3e-025
gb|BE196492.1|BE196492 HVSMEh0092H04f Hordeum vulgare 5-45 ... 116 3e-025
gb|BF629762.1|BF629762 HVSMEb0013L19f Hordeum vulgare seedl... 116 3e-025
gb|BF626822.2|BF626822 HVSMEb0001G21f Hordeum vulgare seedl... 116 3e-025
gb|BF628104.2|BF628104 HVSMEb0003C08f Hordeum vulgare seedl... 116 3e-025
gb|BF628172.2|BF628172 HVSMEb0003F07f Hordeum vulgare seedl... 116 3e-025
gb|BF627186.2|BF627186 HVSMEb0004C22f Hordeum vulgare seedl... 116 3e-025
gb|BF628603.2|BF628603 HVSMEb0006L14f Hordeum vulgare seedl... 116 3e-025
gb|BF629310.2|BF629310 HVSMEb0010M05f Hordeum vulgare seedl... 116 3e-025
gb|BF630702.2|BF630702 HVSMEb0013F02f Hordeum vulgare seedl... 116 3e-025
gb|BG301218.1|BG301218 HVSMEb0019P16f Hordeum vulgare seedl... 116 3e-025
gb|BF257799.2|BF257799 HVSMEf0013O11f Hordeum vulgare seedl... 116 3e-025
gb|AW982473.2|AW982473 HVSMEg0003F20f Hordeum vulgare pre-a... 116 3e-025
gb|BI948506.1|BI948506 HVSMEl0009O07f Hordeum vulgare spike... 116 3e-025
gb|BI949736.1|BI949736 HVSMEl0015K20f Hordeum vulgare spike... 116 3e-025
gb|BI952670.1|BI952670 HVSMEm0007F08f Hordeum vulgare green... 116 3e-025
gb|BI953872.1|BI953872 HVSMEm0015C03f Hordeum vulgare green... 116 3e-025
gb|BI957396.1|BI957396 HVSMEn0009F12f Hordeum vulgare rachi... 116 3e-025
gb|BI957450.1|BI957450 HVSMEn0009J24f Hordeum vulgare rachi... 116 3e-025
gb|BF262864.2|BF262864 HV_CEa0005C19f Hordeum vulgare seedl... 116 3e-025
gb|BF264367.2|BF264367 HV_CEa0009D18f Hordeum vulgare seedl... 116 3e-025
gb|BF264458.2|BF264458 HV_CEa0009H17f Hordeum vulgare seedl... 116 3e-025
gb|BF266157.2|BF266157 HV_CEa0014F08f Hordeum vulgare seedl... 116 3e-025
gb|BF267744.2|BF267744 HV_CEa0018M09f Hordeum vulgare seedl... 116 3e-025
gb|BE214770.2|BE214770 HV_CEb0004I16f Hordeum vulgare seedl... 116 3e-025
gb|BE559066.2|BE559066 HV_CEb0022J16f Hordeum vulgare seedl... 116 3e-025
gb|BF065042.2|BF065042 HV_CEb0022K17f Hordeum vulgare seedl... 116 3e-025
gb|BI958319.1|BI958319 HVSMEn0014G08f Hordeum vulgare rachi... 116 3e-025
gb|BI959901.1|BI959901 HVSMEn0022F01f Hordeum vulgare rachi... 116 3e-025
gb|BE231161.2|BE231161 HVSMEg0017E02f Hordeum vulgare pre-a... 116 3e-025
gb|AW982360.3|AW982360 HVSMEg0003B01f Hordeum vulgare pre-a... 116 3e-025
gb|BG343387.2|BG343387 HVSMEg0005J21f Hordeum vulgare pre-a... 116 3e-025
gb|BE196577.3|BE196577 HVSMEh0092K23f Hordeum vulgare 5-45 ... 116 3e-025
gb|BE559054.3|BE559054 HV_CEb0022I14f Hordeum vulgare seedl... 116 3e-025
gb|AV924396.1|AV924396 AV924396 K. Sato unpublished cDNA li... 116 3e-025
gb|BM444156.1|BM444156 EBem09_SQ004_F07_R embryo, 1 Day ger... 116 3e-025
gb|BQ467706.1|BQ467706 HS04J23r HS Hordeum vulgare subsp. v... 116 3e-025
gb|BQ469022.1|BQ469022 HM03C06r HM Hordeum vulgare subsp. v... 116 3e-025
gb|BQ470366.1|BQ470366 HX02L16r HX Hordeum vulgare subsp. v... 116 3e-025
gb|BQ661509.1|BQ661509 HM03M15u HM Hordeum vulgare subsp. v... 116 3e-025
gb|BQ739816.1|BQ739816 HB03B07 HB Hordeum vulgare subsp. vu... 116 3e-025
gb|BI780380.2|BI780380 EBem06_SQ001_K09_R embryo, 21 DPA, n... 116 3e-025
gb|BM369613.2|BM369613 EBem07_SQ004_C03_R embryo, 28 DPA, n... 116 3e-025
gb|BI780813.2|BI780813 EBes01_SQ002_E13_R embryo sac, 4-6 D... 116 3e-025
gb|BM101204.2|BM101204 EBpi01_SQ003_D02_R pistil, 1 DPA, no... 116 3e-025
gb|BM374527.2|BM374527 EBpi03_SQ003_N23_R pistil, 4 DPA, no... 116 3e-025
gb|BM097219.2|BM097219 EBpi07_SQ002_M10_R pistil, 12 DPA, n... 116 3e-025
gb|BQ754092.1|BQ754092 EBca01_SQ002_N03_R carpel, pre-anthe... 116 3e-025
gb|BQ758422.1|BQ758422 EBma05_SQ003_F22_R maternal, 12 DPA,... 116 3e-025
gb|BU978393.1|BU978393 HA13B15r HA Hordeum vulgare subsp. v... 116 3e-025
gb|BU981537.1|BU981537 HA23O18r HA Hordeum vulgare subsp. v... 116 3e-025
gb|BU981670.1|BU981670 HA24E18r HA Hordeum vulgare subsp. v... 116 3e-025
gb|BU981886.1|BU981886 HA24O17r HA Hordeum vulgare subsp. v... 116 3e-025
gb|BU995479.1|BU995479 HM10G04r HM Hordeum vulgare subsp. v... 116 3e-025
gb|BU996085.1|BU996085 HM12G08r HM Hordeum vulgare subsp. v... 116 3e-025
gb|BU996806.1|BU996806 HM14N05r HM Hordeum vulgare subsp. v... 116 3e-025
gb|BU997601.1|BU997601 HI08H11r HI Hordeum vulgare subsp. v... 116 3e-025
gb|BU998295.1|BU998295 HI10J15r HI Hordeum vulgare subsp. v... 116 3e-025
gb|BU998521.1|BU998521 HI11F05r HI Hordeum vulgare subsp. v... 116 3e-025
gb|CA001627.1|CA001627 HS05B23r HS Hordeum vulgare subsp. v... 116 3e-025
gb|CA003336.1|CA003336 HS14B19r HS Hordeum vulgare subsp. v... 116 3e-025
gb|CA003737.1|CA003737 HS15G12r HS Hordeum vulgare subsp. v... 116 3e-025
gb|CA012689.1|CA012689 HT06C11r HT Hordeum vulgare subsp. v... 116 3e-025
gb|CA018389.1|CA018389 HV08H18r HV Hordeum vulgare subsp. v... 116 3e-025
gb|CA021103.1|CA021103 HZ39B23r HZ Hordeum vulgare subsp. v... 116 3e-025
gb|CA021603.1|CA021603 HZ40J03r HZ Hordeum vulgare subsp. v... 116 3e-025
gb|CA027545.1|CA027545 HZ59E08r HZ Hordeum vulgare subsp. v... 116 3e-025
gb|CA028213.1|CA028213 HZ61F08r HZ Hordeum vulgare subsp. v... 116 3e-025
gb|CA030147.1|CA030147 HX06D15r HX Hordeum vulgare subsp. v... 116 3e-025
gb|CA030707.1|CA030707 HX07O02r HX Hordeum vulgare subsp. v... 116 3e-025
gb|CA030928.1|CA030928 HX08I15r HX Hordeum vulgare subsp. v... 116 3e-025
gb|CA031359.1|CA031359 HX09L18r HX Hordeum vulgare subsp. v... 116 3e-025
gb|CA032957.1|CA032957 HX14L05r HX Hordeum vulgare subsp. v... 116 3e-025
gb|CB877100.1|CB877100 HP03J02T HP Hordeum vulgare subsp. v... 116 3e-025
gb|CB877146.1|CB877146 HP03L12T HP Hordeum vulgare subsp. v... 116 3e-025
gb|CB877627.1|CB877627 HP05J23T HP Hordeum vulgare subsp. v... 116 3e-025
gb|CB878112.1|CB878112 HP07G04T HP Hordeum vulgare subsp. v... 116 3e-025
gb|CB878478.1|CB878478 HP08K23T HP Hordeum vulgare subsp. v... 116 3e-025
gb|CV061486.1|CV061486 BNEL69e10 Barley EST endosperm libra... 116 3e-025
gb|CK123045.1|CK123045 BES1824101n05 BES1824 Hordeum vulgar... 116 3e-025
gb|CK123462.1|CK123462 BES1824104b23 BES1824 Hordeum vulgar... 116 3e-025
gb|BF630241.2|BF630241 HVSMEb0008H01f Hordeum vulgare seedl... 115 4e-025
gb|BF263268.2|BF263268 HV_CEa0006E20f Hordeum vulgare seedl... 115 4e-025
gb|BG368050.2|BG368050 HVSMEi0015H14f Hordeum vulgare 20 DA... 115 4e-025
gb|BM443725.2|BM443725 EBem09_SQ001_E18_R embryo, 1 Day ger... 115 4e-025
gb|BM098148.2|BM098148 EBpi03_SQ002_K24_R pistil, 4 DPA, no... 115 4e-025
gb|BU983821.1|BU983821 HA31C10r HA Hordeum vulgare subsp. v... 115 4e-025
gb|CV056746.1|CV056746 BNEL20b5 Barley EST endosperm librar... 115 4e-025
gb|BM444835.1|BM444835 EBem09_SQ006_K01_R embryo, 1 Day ger... 115 5e-025
gb|BI777554.2|BI777554 EBro04_SQ001_J06_R root, 3 week, sal... 115 5e-025
gb|BQ764762.1|BQ764762 EBca01_SQ004_G20_R carpel, pre-anthe... 115 5e-025
gb|BU977554.1|BU977554 HA11J24r HA Hordeum vulgare subsp. v... 115 5e-025
gb|BF627511.2|BF627511 HVSMEb0005A21f Hordeum vulgare seedl... 114 7e-025
gb|BF263436.2|BF263436 HV_CEa0006L21f Hordeum vulgare seedl... 114 7e-025
gb|BI777431.2|BI777431 EBro04_SQ001_D10_R root, 3 week, sal... 114 7e-025
gb|BU998708.1|BU998708 HI11O21r HI Hordeum vulgare subsp. v... 114 7e-025
emb|Z48624.1|HVGRP3 H.vulgare mRNA for glycine-rich RNA bin... 114 7e-025
gb|BF622957.2|BF622957 HVSMEa0012E15f Hordeum vulgare seedl... 114 9e-025
gb|BF628541.2|BF628541 HVSMEb0006H16f Hordeum vulgare seedl... 114 9e-025
gb|BF630328.2|BF630328 HVSMEb0008M06f Hordeum vulgare seedl... 114 9e-025
gb|BG300222.1|BG300222 HVSMEb0011J20f Hordeum vulgare seedl... 114 9e-025
gb|BG345046.1|BG345046 HVSMEg0018G20f Hordeum vulgare pre-a... 114 9e-025
gb|BG367529.1|BG367529 HVSMEi0012J10f Hordeum vulgare 20 DA... 114 9e-025
gb|BF264369.2|BF264369 HV_CEa0009D20f Hordeum vulgare seedl... 114 9e-025
gb|BF265447.2|BF265447 HV_CEa0012E18f Hordeum vulgare seedl... 114 9e-025
gb|BE215727.2|BE215727 HV_CEb0008F06f Hordeum vulgare seedl... 114 9e-025
gb|BI958703.1|BI958703 HVSMEn0016E15f Hordeum vulgare rachi... 114 9e-025
gb|BF630685.3|BF630685 HVSMEb0013B08f Hordeum vulgare seedl... 114 9e-025
gb|BG344423.2|BG344423 HVSMEg0009D15f Hordeum vulgare pre-a... 114 9e-025
gb|BE060107.3|BE060107 HVSMEg0011H22f Hordeum vulgare pre-a... 114 9e-025
gb|BE456073.3|BE456073 HVSMEg0019J18f Hordeum vulgare pre-a... 114 9e-025
gb|BM368356.2|BM368356 EBed01_SQ002_O17_R endosperm, 6 DPA,... 114 9e-025
gb|BM377196.2|BM377196 EBem05_SQ004_G13_R embryo, 14 DPA, n... 114 9e-025
gb|BM100445.2|BM100445 EBma01_SQ005_D21_R maternal, 4 DPA, ... 114 9e-025
gb|BI778790.2|BI778790 EBro01_SQ001_I06_R root, 3 week, hyd... 114 9e-025
gb|BM371122.2|BM371122 EBro04_SQ003_I20_R root, 3 week, sal... 114 9e-025
gb|BI778167.2|BI778167 EBro07_SQ002_G15_R root, 3 week, red... 114 9e-025
gb|BM370579.2|BM370579 EBro08_SQ004_K10_R root, 3 week, dro... 114 9e-025
gb|BQ753300.1|BQ753300 EBan01_SQ001_G10_R anther, yellow st... 114 9e-025
gb|BQ760747.1|BQ760747 EBro03_SQ003_F20_R root, 3 week, wat... 114 9e-025
gb|BQ762920.1|BQ762920 EBro02_SQ006_E14_R root, 3 week, hyd... 114 9e-025
gb|BQ765032.1|BQ765032 EBca01_SQ005_I14_R carpel, pre-anthe... 114 9e-025
gb|BQ766329.1|BQ766329 EBro08_SQ005_M13 _R root, 3 week, dr... 114 9e-025
gb|BU996492.1|BU996492 HM13M16r HM Hordeum vulgare subsp. v... 114 9e-025
gb|BU996912.1|BU996912 HI06E04r HI Hordeum vulgare subsp. v... 114 9e-025
gb|BU997511.1|BU997511 HI08D09r HI Hordeum vulgare subsp. v... 114 9e-025
gb|BU997946.1|BU997946 HI09I02r HI Hordeum vulgare subsp. v... 114 9e-025
gb|CA001783.1|CA001783 HS05J05r HS Hordeum vulgare subsp. v... 114 9e-025
gb|CB882705.1|CB882705 HL02J22w HL Hordeum vulgare subsp. v... 114 9e-025
gb|CV056544.1|CV056544 BNEL19A10 Barley EST endosperm libra... 114 9e-025
gb|CV057078.1|CV057078 BNEL23g5 Barley EST endosperm librar... 114 9e-025
gb|CV058731.1|CV058731 BNEL40c12 Barley EST endosperm libra... 114 9e-025
gb|CV061567.1|CV061567 BNEL6D5 Barley EST endosperm library... 114 9e-025
gb|CV062681.1|CV062681 BNEL81g4 Barley EST endosperm librar... 114 9e-025
gb|CV062951.1|CV062951 BNEL84h7 Barley EST endosperm librar... 114 9e-025
gb|CV064316.1|CV064316 BNEL9E7 Barley EST endosperm library... 114 9e-025
gb|BI957612.1|BI957612 HVSMEn0010F22f Hordeum vulgare rachi... 113 1e-024
gb|BF262197.2|BF262197 HV_CEa0003J10f Hordeum vulgare seedl... 113 1e-024
gb|BF266182.2|BF266182 HV_CEa0014G12f Hordeum vulgare seedl... 113 1e-024
gb|BM377387.2|BM377387 EBem05_SQ004_P17_R embryo, 14 DPA, n... 113 1e-024
gb|BQ766713.1|BQ766713 EBro08_SQ006_M20 _R root, 3 week, dr... 113 1e-024
gb|CA003168.1|CA003168 HS09J23r HS Hordeum vulgare subsp. v... 113 1e-024
gb|U49482.1|HVU49482 Hordeum vulgare low temperature-respon... 113 1e-024
gb|BG299266.1|BG299266 HVSMEa0019B07f Hordeum vulgare seedl... 113 2e-024
gb|BI955687.1|BI955687 HVSMEm0024A20f Hordeum vulgare green... 113 2e-024
gb|BE213986.1|BE213986 HV_CEb0001N08f Hordeum vulgare seedl... 113 2e-024
gb|BG301045.1|BG301045 HVSMEb0019F18f Hordeum vulgare seedl... 112 2e-024
gb|BE216109.2|BE216109 HV_CEb0009H07f Hordeum vulgare seedl... 112 2e-024
gb|BI958198.1|BI958198 HVSMEn0013N10f Hordeum vulgare rachi... 112 2e-024
gb|BE455168.3|BE455168 HVSMEh0096H06f Hordeum vulgare 5-45 ... 112 2e-024
gb|BQ467793.1|BQ467793 HS04O21r HS Hordeum vulgare subsp. v... 112 2e-024
gb|BQ764920.1|BQ764920 EBca01_SQ005_C12_R carpel, pre-anthe... 112 2e-024
gb|AU090242.1|AU090242 AU090242 Hordeum vulgare subsp. vulg... 112 3e-024
gb|BF622285.2|BF622285 HVSMEa0002I13f Hordeum vulgare seedl... 112 3e-024
gb|BF625071.2|BF625071 HVSMEa0005L08f Hordeum vulgare seedl... 112 3e-024
gb|BG367122.1|BG367122 HVSMEi0010K03f Hordeum vulgare 20 DA... 112 3e-024
gb|BG368752.1|BG368752 HVSMEi0020I03f Hordeum vulgare 20 DA... 112 3e-024
gb|BI949367.1|BI949367 HVSMEl0013I23f Hordeum vulgare spike... 112 3e-024
gb|BE559056.1|BE559056 HV_CEb0022I18f Hordeum vulgare seedl... 112 3e-024
gb|BQ463597.1|BQ463597 HI05N10r HI Hordeum vulgare subsp. v... 112 3e-024
gb|BI779353.2|BI779353 EBro01_SQ003_M07_R root, 3 week, hyd... 112 3e-024
gb|CB879111.1|CB879111 HP10P16T HP Hordeum vulgare subsp. v... 112 3e-024
gb|AL506566.1|AL506566 AL506566 Hordeum vulgare Barke devel... 111 5e-024
gb|BF623713.2|BF623713 HVSMEa0005A15f Hordeum vulgare seedl... 111 5e-024
gb|BF628126.3|BF628126 HVSMEb0003D07f Hordeum vulgare seedl... 111 5e-024
gb|BM096506.2|BM096506 EBma03_SQ001_O16_R maternal, 8 DPA, ... 111 5e-024
gb|BI777859.2|BI777859 EBro08_SQ002_F11_R root, 3 week, dro... 111 5e-024
gb|BQ760966.1|BQ760966 EBro03_SQ003_P19_R root, 3 week, wat... 111 5e-024
gb|BU998308.1|BU998308 HI10K08r HI Hordeum vulgare subsp. v... 111 5e-024
gb|BU998825.1|BU998825 HI12E10r HI Hordeum vulgare subsp. v... 111 5e-024
gb|CA024288.1|CA024288 HZ48O05r HZ Hordeum vulgare subsp. v... 111 5e-024
gb|CK125146.1|CK125146 BES1824106n06 BES1824 Hordeum vulgar... 111 5e-024
gb|BG343478.2|BG343478 HVSMEg0005N23f Hordeum vulgare pre-a... 111 6e-024
gb|AW983214.3|AW983214 HVSMEg0008L18f Hordeum vulgare pre-a... 111 6e-024
gb|BQ467056.1|BQ467056 HS02H01r HS Hordeum vulgare subsp. v... 111 6e-024
gb|BM374427.2|BM374427 EBpi03_SQ003_J13_R pistil, 4 DPA, no... 111 6e-024
gb|CA001963.1|CA001963 HS06B24r HS Hordeum vulgare subsp. v... 111 6e-024
gb|CA002595.1|CA002595 HS07P17r HS Hordeum vulgare subsp. v... 111 6e-024
gb|CA002631.1|CA002631 HS08B09r HS Hordeum vulgare subsp. v... 111 6e-024
gb|CA030116.1|CA030116 HX06C05r HX Hordeum vulgare subsp. v... 111 6e-024
gb|CA032053.1|CA032053 HX11N23r HX Hordeum vulgare subsp. v... 111 6e-024
gb|CK124571.1|CK124571 BES1824109j04 BES1824 Hordeum vulgar... 111 6e-024
gb|CK125367.1|CK125367 BES1824107m24 BES1824 Hordeum vulgar... 111 6e-024
gb|BE421475.1|BE421475 HWM009.F12 ITEC HWM Barley Leaf Libr... 111 9e-024
gb|BE421648.1|BE421648 HWM012cD.02r ITEC HWM Barley Leaf Li... 111 9e-024
gb|AL509662.1|AL509662 AL509662 Hordeum vulgare Barke devel... 111 9e-024
gb|BF259750.2|BF259750 HVSMEf0020C15f Hordeum vulgare seedl... 111 9e-024
gb|BF265591.2|BF265591 HV_CEa0012L19f Hordeum vulgare seedl... 111 9e-024
gb|BE558997.3|BE558997 HV_CEb0022C22f Hordeum vulgare seedl... 111 9e-024
gb|AV920333.1|AV920333 AV920333 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ452041.1|BJ452041 BJ452041 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ453403.1|BJ453403 BJ453403 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ457890.1|BJ457890 BJ457890 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ459598.1|BJ459598 BJ459598 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ460949.1|BJ460949 BJ460949 K. Sato unpublished cDNA li... 111 9e-024
gb|BJ463441.1|BJ463441 BJ463441 K. Sato unpublished cDNA li... 111 9e-024
gb|BM097937.2|BM097937 EBpi03_SQ002_B15_R pistil, 4 DPA, no... 111 9e-024
gb|CA003725.1|CA003725 HS15F23r HS Hordeum vulgare subsp. v... 111 9e-024
gb|CA025560.1|CA025560 HZ52I04r HZ Hordeum vulgare subsp. v... 111 9e-024
gb|CK123750.1|CK123750 BES1824105e05 BES1824 Hordeum vulgar... 111 9e-024
gb|BI958152.1|BI958152 HVSMEn0013K09f Hordeum vulgare rachi... 110 1e-023
gb|BG416055.2|BG416055 HVSMEk0009J14f Hordeum vulgare testa... 110 1e-023
gb|AV911636.1|AV911636 AV911636 K. Sato unpublished cDNA li... 110 1e-023
gb|BJ448952.1|BJ448952 BJ448952 K. Sato unpublished cDNA li... 110 1e-023
gb|BJ462091.1|BJ462091 BJ462091 K. Sato unpublished cDNA li... 110 1e-023
gb|BE420872.1|BE420872 HWM003.D09 ITEC HWM Barley Leaf Libr... 110 2e-023
gb|BF625906.2|BF625906 HVSMEa0014D13f Hordeum vulgare seedl... 110 2e-023
gb|BF628566.2|BF628566 HVSMEb0006J08f Hordeum vulgare seedl... 110 2e-023
gb|BF265907.2|BF265907 HV_CEa0013K10f Hordeum vulgare seedl... 110 2e-023
gb|AV908943.1|AV908943 AV908943 K. Sato unpublished cDNA li... 110 2e-023
gb|AV909735.1|AV909735 AV909735 K. Sato unpublished cDNA li... 110 2e-023
gb|AV910832.1|AV910832 AV910832 K. Sato unpublished cDNA li... 110 2e-023
gb|AV912687.1|AV912687 AV912687 K. Sato unpublished cDNA li... 110 2e-023
gb|AV916433.1|AV916433 AV916433 K. Sato unpublished cDNA li... 110 2e-023
gb|AV917953.1|AV917953 AV917953 K. Sato unpublished cDNA li... 110 2e-023
gb|AV927650.1|AV927650 AV927650 K. Sato unpublished cDNA li... 110 2e-023
gb|BM101488.2|BM101488 EBem08_SQ001_N16_R embryo, 40 DPA, n... 110 2e-023
gb|BI779189.2|BI779189 EBro01_SQ003_E07_R root, 3 week, hyd... 110 2e-023
gb|BI777405.2|BI777405 EBro04_SQ001_C01_R root, 3 week, sal... 110 2e-023
gb|CA025818.1|CA025818 HZ53D19r HZ Hordeum vulgare subsp. v... 110 2e-023
gb|BJ544019.1|BJ544019 BJ544019 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ544461.1|BJ544461 BJ544461 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ544827.1|BJ544827 BJ544827 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ544883.1|BJ544883 BJ544883 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ545283.1|BJ545283 BJ545283 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ545366.1|BJ545366 BJ545366 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ545537.1|BJ545537 BJ545537 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ545916.1|BJ545916 BJ545916 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ546367.1|BJ546367 BJ546367 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ546727.1|BJ546727 BJ546727 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ546821.1|BJ546821 BJ546821 K. Sato unpublished cDNA li... 110 2e-023
gb|CB881048.1|CB881048 HM08J21w HM Hordeum vulgare subsp. v... 110 2e-023
gb|BG343894.1|BG343894 HVSMEg0007A21f Hordeum vulgare pre-a... 109 2e-023
gb|AW982585.3|AW982585 HVSMEg0003K17f Hordeum vulgare pre-a... 109 2e-023
gb|AV926792.1|AV926792 AV926792 K. Sato unpublished cDNA li... 109 2e-023
gb|BQ765195.1|BQ765195 EBro03_SQ006_A18_R root, 3 week, wat... 109 2e-023
gb|BU997856.1|BU997856 HI09D16r HI Hordeum vulgare subsp. v... 109 2e-023
gb|CB882243.1|CB882243 HL01F02w HL Hordeum vulgare subsp. v... 109 2e-023
gb|BG300057.1|BG300057 HVSMEb0011D12f Hordeum vulgare seedl... 109 3e-023
gb|BE193987.2|BE193987 HVSMEh0083D05f Hordeum vulgare 5-45 ... 109 3e-023
gb|BG367672.1|BG367672 HVSMEi0013D03f Hordeum vulgare 20 DA... 109 3e-023
gb|BI956089.1|BI956089 HVSMEm0025K03f Hordeum vulgare green... 109 3e-023
gb|BE214466.3|BE214466 HV_CEb0003I15f Hordeum vulgare seedl... 109 3e-023
gb|BF626790.2|BF626790 HVSMEb0001F13f Hordeum vulgare seedl... 108 4e-023
gb|BI959485.1|BI959485 HVSMEn0019N16f Hordeum vulgare rachi... 108 4e-023
gb|BJ450470.1|BJ450470 BJ450470 K. Sato unpublished cDNA li... 108 4e-023
gb|BM376283.2|BM376283 EBma01_SQ002_O13_R maternal, 4 DPA, ... 108 4e-023
gb|BI776516.2|BI776516 EBpi05_SQ001_L03_R pistil, 8 DPA, no... 108 4e-023
gb|BI778692.2|BI778692 EBro01_SQ001_B16_R root, 3 week, hyd... 108 4e-023
gb|CA002101.1|CA002101 HS06I11r HS Hordeum vulgare subsp. v... 108 4e-023
gb|CK125187.1|CK125187 BES1824106p10 BES1824 Hordeum vulgar... 108 4e-023
emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for... 108 4e-023
gb|BF629596.2|BF629596 HVSMEb0013H15f Hordeum vulgare seedl... 108 6e-023
gb|CA004430.1|CA004430 HS17I24r HS Hordeum vulgare subsp. v... 108 6e-023
gb|BF628349.2|BF628349 HVSMEb0003M17f Hordeum vulgare seedl... 107 8e-023
gb|BE455628.2|BE455628 HVSMEg0018F18f Hordeum vulgare pre-a... 107 8e-023
gb|BI954840.1|BI954840 HVSMEm0020A05f Hordeum vulgare green... 107 8e-023
gb|BI955927.1|BI955927 HVSMEm0025B15f Hordeum vulgare green... 107 8e-023
gb|BG416069.2|BG416069 HVSMEk0009K08f Hordeum vulgare testa... 107 8e-023
gb|BJ455575.1|BJ455575 BJ455575 K. Sato unpublished cDNA li... 107 8e-023
gb|BI779190.2|BI779190 EBro01_SQ003_E08_R root, 3 week, hyd... 107 8e-023
gb|CK122461.1|CK122461 BES1824103j04 BES1824 Hordeum vulgar... 107 8e-023
gb|BF264797.2|BF264797 HV_CEa0010G10f Hordeum vulgare seedl... 107 1e-022
gb|AV922236.1|AV922236 AV922236 K. Sato unpublished cDNA li... 107 1e-022
gb|AV912412.1|AV912412 AV912412 K. Sato unpublished cDNA li... 106 2e-022
gb|BJ544172.1|BJ544172 BJ544172 K. Sato unpublished cDNA li... 106 2e-022
gb|CB876955.1|CB876955 HP03A10T HP Hordeum vulgare subsp. v... 106 2e-022
gb|BQ468700.1|BQ468700 HM02A19r HM Hordeum vulgare subsp. v... 106 2e-022
gb|CA002835.1|CA002835 HS08K16r HS Hordeum vulgare subsp. v... 106 2e-022
gb|CK123661.1|CK123661 BES1824105a03 BES1824 Hordeum vulgar... 106 2e-022
gb|BQ764985.1|BQ764985 EBca01_SQ005_O11_R carpel, pre-anthe... 105 3e-022
gb|BU970705.1|BU970705 HB15G24r BC Hordeum vulgare subsp. v... 105 3e-022
gb|BU971368.1|BU971368 HB17G16r BC Hordeum vulgare subsp. v... 105 3e-022
gb|CK124664.1|CK124664 BES1824109o15 BES1824 Hordeum vulgar... 105 3e-022
gb|BE411221.1|BE411221 ISC003.C11F990519 ITEC ISC Barley Le... 105 4e-022
gb|BF262536.2|BF262536 HV_CEa0004E08f Hordeum vulgare seedl... 105 4e-022
gb|BF264044.2|BF264044 HV_CEa0008G03f Hordeum vulgare seedl... 105 4e-022
gb|AV915386.1|AV915386 AV915386 K. Sato unpublished cDNA li... 105 4e-022
gb|AV920474.1|AV920474 AV920474 K. Sato unpublished cDNA li... 105 4e-022
gb|AV925358.1|AV925358 AV925358 K. Sato unpublished cDNA li... 105 4e-022
gb|AV930403.1|AV930403 AV930403 K. Sato unpublished cDNA li... 105 4e-022
gb|AV930514.1|AV930514 AV930514 K. Sato unpublished cDNA li... 105 4e-022
gb|AV930515.1|AV930515 AV930515 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ447754.1|BJ447754 BJ447754 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ451759.1|BJ451759 BJ451759 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ455499.1|BJ455499 BJ455499 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ459255.1|BJ459255 BJ459255 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ460497.1|BJ460497 BJ460497 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ464910.1|BJ464910 BJ464910 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ465151.1|BJ465151 BJ465151 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ468310.1|BJ468310 BJ468310 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ468413.1|BJ468413 BJ468413 K. Sato unpublished cDNA li... 105 4e-022
gb|BJ468632.1|BJ468632 BJ468632 K. Sato unpublished cDNA li... 105 4e-022
gb|BI780031.2|BI780031 EBma08_SQ001_D11_R maternal, 28 DPA,... 105 4e-022
emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for... 105 4e-022
gb|BE519676.1|BE519676 HV_CEb0018E10f Hordeum vulgare seedl... 105 5e-022
gb|BF261381.3|BF261381 HV_CEa0001C05f Hordeum vulgare seedl... 104 7e-022
gb|AV909228.1|AV909228 AV909228 K. Sato unpublished cDNA li... 104 7e-022
gb|AV911113.1|AV911113 AV911113 K. Sato unpublished cDNA li... 104 7e-022
gb|AV922314.1|AV922314 AV922314 K. Sato unpublished cDNA li... 104 7e-022
gb|BJ467664.1|BJ467664 BJ467664 K. Sato unpublished cDNA li... 104 7e-022
gb|BQ463621.1|BQ463621 HI05O19r HI Hordeum vulgare subsp. v... 104 7e-022
gb|BI779945.2|BI779945 EBem07_SQ001_L23_R embryo, 28 DPA, n... 104 7e-022
gb|CA015771.1|CA015771 HV12D23u HV Hordeum vulgare subsp. v... 104 7e-022
gb|BG344406.2|BG344406 HVSMEg0009C21f Hordeum vulgare pre-a... 104 1e-021
gb|BJ463194.1|BJ463194 BJ463194 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ467227.1|BJ467227 BJ467227 K. Sato unpublished cDNA li... 104 1e-021
gb|BM098922.2|BM098922 EBpi05_SQ002_H03_R pistil, 8 DPA, no... 104 1e-021
gb|CK122336.1|CK122336 BES1824102p01 BES1824 Hordeum vulgar... 104 1e-021
gb|CK123696.1|CK123696 BES1824105b22 BES1824 Hordeum vulgar... 104 1e-021
gb|BE411015.1|BE411015 ISC001.D12F990325 ITEC ISC Barley Le... 103 1e-021
gb|BF629865.2|BF629865 HVSMEb0007C04f Hordeum vulgare seedl... 103 1e-021
gb|BF631184.2|BF631184 HVSMEb0015D09f Hordeum vulgare seedl... 103 1e-021
gb|BJ465871.1|BJ465871 BJ465871 K. Sato unpublished cDNA li... 103 1e-021
gb|CV054938.1|CV054938 BNEL115a10 Barley EST endosperm libr... 103 1e-021
gb|BE216066.1|BE216066 HV_CEb0009E20f Hordeum vulgare seedl... 103 2e-021
gb|BQ758397.1|BQ758397 EBma05_SQ001_L09_R maternal, 12 DPA,... 103 2e-021
gb|BE194807.3|BE194807 HVSMEh0087A04f Hordeum vulgare 5-45 ... 102 3e-021
gb|BQ762469.1|BQ762469 EBro01_SQ005_O19_R root, 3 week, hyd... 102 3e-021
gb|BF625845.2|BF625845 HVSMEa0013N08f Hordeum vulgare seedl... 102 4e-021
gb|BI952119.1|BI952119 HVSMEm0004K21f Hordeum vulgare green... 102 4e-021
gb|AV913175.1|AV913175 AV913175 K. Sato unpublished cDNA li... 102 4e-021
gb|AV922933.1|AV922933 AV922933 K. Sato unpublished cDNA li... 102 4e-021
gb|BQ758401.1|BQ758401 EBma05_SQ001_M01_R maternal, 12 DPA,... 102 4e-021
gb|BU979562.1|BU979562 HA16I20r HA Hordeum vulgare subsp. v... 102 4e-021
gb|BU984461.1|BU984461 HF04A15r HF Hordeum vulgare subsp. v... 102 4e-021
gb|CA004684.1|CA004684 HS18F24r HS Hordeum vulgare subsp. v... 102 4e-021
gb|CA012428.1|CA012428 HT05G12r HT Hordeum vulgare subsp. v... 102 4e-021
gb|CA015320.1|CA015320 HT13P05r HT Hordeum vulgare subsp. v... 102 4e-021
gb|CA023263.1|CA023263 HZ45L09r HZ Hordeum vulgare subsp. v... 102 4e-021
gb|BF254436.2|BF254436 HVSMEf0004A07f Hordeum vulgare seedl... 101 5e-021
gb|BF267669.2|BF267669 HV_CEa0018J01f Hordeum vulgare seedl... 101 5e-021
gb|CB877475.1|CB877475 HP05B02T HP Hordeum vulgare subsp. v... 101 5e-021
gb|BF257655.2|BF257655 HVSMEf0013H15f Hordeum vulgare seedl... 95 6e-021
gb|BG301187.1|BG301187 HVSMEb0019N17f Hordeum vulgare seedl... 101 7e-021
gb|BF629566.2|BF629566 HVSMEb0013F23f Hordeum vulgare seedl... 100 9e-021
gb|BI959704.1|BI959704 HVSMEn0020O03f Hordeum vulgare rachi... 100 9e-021
gb|AV910254.1|AV910254 AV910254 K. Sato unpublished cDNA li... 100 9e-021
gb|BQ660605.1|BQ660605 HI04H04u HI Hordeum vulgare subsp. v... 100 9e-021
gb|CB882357.1|CB882357 HL01K08w HL Hordeum vulgare subsp. v... 100 9e-021
>gb|BU998475.1|BU998475 HI11C23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11C23
5-PRIME, mRNA sequence
Length = 507
Score = 144 bits (308), Expect(2) = 4e-044
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 153 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 332
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 333 KGMDGQELGGRNVRVNFANERPSG 404
Score = 78.0 bits (164), Expect(3) = 1e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 295 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 158
Score = 54.7 bits (113), Expect(2) = 4e-044
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -3 / +3
Query: 772 PSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
PS +V MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 6 PSRVVLFMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 131
Score = 50.6 bits (104), Expect(3) = 1e-024
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAIANT 761
M RAALN AG EP L +ALCLRR PSL++AA+ T
Sbjct: 130 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAMNKT 17
Score = 22.1 bits (42), Expect(3) = 1e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 403 PEGLSLAKFTRT 368
>gb|BU999809.1|BU999809 HI15O09r HI Hordeum vulgare subsp. vulgare cDNA clone HI15O09
5-PRIME, mRNA sequence
Length = 532
Score = 144 bits (308), Expect(2) = 6e-044
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 357
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 358 KGMDGQELGGRNVRVNFANERPSG 429
Score = 78.0 bits (164), Expect(3) = 1e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 320 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 183
Score = 54.2 bits (112), Expect(2) = 6e-044
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -3 / +1
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
R +S SS LV MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 1 RAVSSRPSSSLPRLVLFMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 156
Score = 50.6 bits (104), Expect(3) = 1e-024
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAIANT 761
M RAALN AG EP L +ALCLRR PSL++AA+ T
Sbjct: 155 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAMNKT 42
Score = 22.1 bits (42), Expect(3) = 1e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 428 PEGLSLAKFTRT 393
>gb|BF262024.2|BF262024 HV_CEa0002N17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002N17f, mRNA sequence
Length = 817
Score = 144 bits (308), Expect(2) = 1e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 180 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 359
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 360 KGMDGQELGGRNVRVNFANERPSG 431
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 322 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 185
Score = 52.8 bits (109), Expect(2) = 1e-043
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 5 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 160
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 159 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 55
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 430 PEGLSLAKFTRT 395
>gb|BG301140.1|BG301140 HVSMEb0019L03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019L03f, mRNA sequence
Length = 590
Score = 144 bits (308), Expect(2) = 1e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 357
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 358 KGMDGQELGGRNVRVNFANERPSG 429
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 320 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 183
Score = 52.8 bits (109), Expect(2) = 1e-043
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +1
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 1 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 156
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 155 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 51
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 428 PEGLSLAKFTRT 393
>gb|BM375524.2|BM375524 EBem06_SQ003_J16_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_J16 5', mRNA sequence
Length = 458
Score = 144 bits (308), Expect(2) = 1e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 359 KGMDGQELGGRNVRVNFANERPSG 430
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 321 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 184
Score = 52.8 bits (109), Expect(2) = 1e-043
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 2 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 157
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 156 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 52
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 429 PEGLSLAKFTRT 394
>gb|BU999425.1|BU999425 HI14H13r HI Hordeum vulgare subsp. vulgare cDNA clone HI14H13
5-PRIME, mRNA sequence
Length = 635
Score = 144 bits (308), Expect(2) = 2e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
Score = 78.0 bits (164), Expect(3) = 5e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 314 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 177
Score = 52.4 bits (108), Expect(2) = 2e-043
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -3 / +1
Query: 772 PSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
P LV +AA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 25 PPELVLFLAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 150
Score = 48.7 bits (100), Expect(3) = 5e-024
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAA 749
M RAALN AG EP L +ALCLRR PSL++AA
Sbjct: 149 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAA 48
Score = 22.1 bits (42), Expect(3) = 5e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 422 PEGLSLAKFTRT 387
>gb|BU981088.1|BU981088 HA22J18r HA Hordeum vulgare subsp. vulgare cDNA clone HA22J18
5-PRIME, mRNA sequence
Length = 500
Score = 144 bits (308), Expect(2) = 3e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 182 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 361
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 362 KGMDGQELGGRNVRVNFANERPSG 433
Score = 78.0 bits (164), Expect(3) = 1e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 324 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 187
Score = 51.9 bits (107), Expect(2) = 3e-043
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -3 / +2
Query: 763 LVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
LV MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 44 LVLFMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 160
Score = 50.6 bits (104), Expect(3) = 1e-024
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAIANT 761
M RAALN AG EP L +ALCLRR PSL++AA+ T
Sbjct: 159 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAMNKT 46
Score = 22.1 bits (42), Expect(3) = 1e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 432 PEGLSLAKFTRT 397
>gb|BI780514.2|BI780514 EBem08_SQ001_K14_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ001_K14 5', mRNA sequence
Length = 452
Score = 143 bits (306), Expect(2) = 3e-043
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG E+ GR VRVN ANERP+G
Sbjct: 359 KGMDGXELGGRNVRVNFANERPSG 430
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 321 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 184
Score = 52.8 bits (109), Expect(2) = 3e-043
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 2 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 157
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 156 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 52
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 429 PEGLSLAKFTRT 394
>gb|BF629048.2|BF629048 HVSMEb0009K20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009K20f, mRNA sequence
Length = 779
Score = 144 bits (308), Expect(2) = 4e-043
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDA*NAA 353
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN+ANERP+G
Sbjct: 354 KGMDGQELGGRNVRVNLANERPSG 425
Score = 78.0 bits (164), Expect(3) = 3e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 316 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 179
Score = 51.5 bits (106), Expect(2) = 4e-043
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR+M
Sbjct: 42 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARVM 152
Score = 49.6 bits (102), Expect(3) = 3e-024
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M+RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 151 MTRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 47
Score = 22.1 bits (42), Expect(3) = 3e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 424 PEGLSLAKFTRT 389
>gb|BG343608.1|BG343608 HVSMEg0006A07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006A07f, mRNA sequence
Length = 993
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 316 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 179
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 42 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 152
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 151 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 47
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 424 PEGLSLAKFTRT 389
>gb|BE231114.2|BE231114 HVSMEg0016N01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N01f, mRNA sequence
Length = 961
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 316 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 179
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 42 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 152
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 151 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 47
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 424 PEGLSLAKFTRT 389
>gb|BJ453522.1|BJ453522 BJ453522 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43g11 5', mRNA sequence
Length = 690
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 176 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 355
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 356 KGMDGQELGGRNVRVNFANERPSG 427
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 318 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 181
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 44 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 154
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 153 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 49
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 426 PEGLSLAKFTRT 391
>gb|BM370309.2|BM370309 EBro08_SQ003_M20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M20 5', mRNA sequence
Length = 681
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 311 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 174
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 37 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 147
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 146 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 42
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 419 PEGLSLAKFTRT 384
>gb|BM370561.2|BM370561 EBro08_SQ004_J15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J15 5', mRNA sequence
Length = 631
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 314 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 177
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 40 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 150
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 149 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 45
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 422 PEGLSLAKFTRT 387
>gb|AL509144.1|AL509144 AL509144 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10N11V 5',
mRNA sequence
Length = 569
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 164 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 343
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 344 KGMDGQELGGRNVRVNFANERPSG 415
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 306 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 169
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 32 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 142
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 141 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 37
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 414 PEGLSLAKFTRT 379
>gb|BU976484.1|BU976484 HA03M13r HA Hordeum vulgare subsp. vulgare cDNA clone HA03M13
5-PRIME, mRNA sequence
Length = 532
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 187 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 366
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 367 KGMDGQELGGRNVRVNFANERPSG 438
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 329 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 192
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 55 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 165
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 164 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 60
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 437 PEGLSLAKFTRT 402
>gb|BU978152.1|BU978152 HA12K16r HA Hordeum vulgare subsp. vulgare cDNA clone HA12K16
5-PRIME, mRNA sequence
Length = 534
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 186 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 365
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 366 KGMDGQELGGRNVRVNFANERPSG 437
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 328 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 191
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 54 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 164
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 163 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 59
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 436 PEGLSLAKFTRT 401
>gb|BU982679.1|BU982679 HA27E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA27E15
5-PRIME, mRNA sequence
Length = 528
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 184 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 363
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 364 KGMDGQELGGRNVRVNFANERPSG 435
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 326 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 189
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 52 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 162
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 161 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 57
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 434 PEGLSLAKFTRT 399
>gb|BQ471702.1|BQ471702 HV03D11r HV Hordeum vulgare subsp. vulgare cDNA clone HV03D11
5-PRIME, mRNA sequence
Length = 514
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 177 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 356
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 357 KGMDGQELGGRNVRVNFANERPSG 428
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 319 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 182
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 45 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 155
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 154 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 50
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 427 PEGLSLAKFTRT 392
>gb|BU989672.1|BU989672 HF22G04r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G04
5-PRIME, mRNA sequence
Length = 514
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 170 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 349
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 350 KGMDGQELGGRNVRVNFANERPSG 421
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 312 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 175
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 38 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 148
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 147 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 43
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 420 PEGLSLAKFTRT 385
>gb|BM377503.2|BM377503 EBem04_SQ003_F08_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_F08 5', mRNA sequence
Length = 509
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 314 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 177
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 40 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 150
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 149 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 45
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 422 PEGLSLAKFTRT 387
>gb|CA023990.1|CA023990 HZ48A20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A20
5-PRIME, mRNA sequence
Length = 507
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 167 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 346
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 347 KGMDGQELGGRNVRVNFANERPSG 418
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 309 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 172
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 35 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 145
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 144 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 40
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 417 PEGLSLAKFTRT 382
>gb|BQ755111.1|BQ755111 EBed02_SQ003_M03_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ003_M03 5', mRNA sequence
Length = 495
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 314 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 177
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 40 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 150
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 149 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 45
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 422 PEGLSLAKFTRT 387
>gb|BU996297.1|BU996297 HM13C17r HM Hordeum vulgare subsp. vulgare cDNA clone HM13C17
5-PRIME, mRNA sequence
Length = 486
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 141 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 320
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 321 KGMDGQELGGRNVRVNFANERPSG 392
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 283 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 146
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 9 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 119
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 118 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 14
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 391 PEGLSLAKFTRT 356
>gb|BM376493.2|BM376493 EBem05_SQ002_G04_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_G04 5', mRNA sequence
Length = 461
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 316 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 179
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 42 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 152
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 151 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 47
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 424 PEGLSLAKFTRT 389
>gb|BM098998.2|BM098998 EBpi05_SQ002_K14_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_K14 5', mRNA sequence
Length = 440
Score = 144 bits (308), Expect(2) = 5e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 311 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 174
Score = 51.0 bits (105), Expect(2) = 5e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 37 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 147
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 146 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 42
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 419 PEGLSLAKFTRT 384
>gb|AL505139.1|AL505139 AL505139 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I09V 5', mRNA sequence
Length = 562
Score = 144 bits (308), Expect(2) = 7e-043
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 167 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 346
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 347 KGMDGQELGGRNVRVNFANERPSG 418
Score = 78.0 bits (164), Expect(3) = 2e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 309 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 172
Score = 50.6 bits (104), Expect(2) = 7e-043
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S GS+PA+FNAAR M
Sbjct: 35 YSMAALIKLGSLLRQSAFASSAXTGSAPALFNAARFM 145
Score = 50.1 bits (103), Expect(3) = 2e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 144 MKRAALNRAGAEPVXALLAKALCLRRLPSLMRAAM 40
Score = 22.1 bits (42), Expect(3) = 2e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 417 PEGLSLAKFTRT 382
>gb|CA023278.1|CA023278 HZ45M01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45M01
5-PRIME, mRNA sequence
Length = 437
Score = 141 bits (302), Expect(2) = 1e-042
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 189 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 368
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
MDG+E+ GR VRVN ANERP+
Sbjct: 369 KGMDGQELGGRNVRVNFANERPS 437
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 331 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 194
Score = 52.8 bits (109), Expect(2) = 1e-042
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +3
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 12 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 167
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 166 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 62
>gb|BQ762387.1|BQ762387 EBro01_SQ005_N15 _R root, 3 week, hydroponic grown, no treatment,
cv Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA
clone EBro01_SQ005_N15 5', mRNA sequence
Length = 569
Score = 144 bits (308), Expect(2) = 1e-042
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 173 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 352
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 353 KGMDGQELGGRNVRVNFANERPSG 424
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 315 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 178
Score = 49.6 bits (102), Expect(2) = 1e-042
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LL+ SA S + GS+PA+FNAAR M
Sbjct: 41 YSMAALIKLGSLLKQSAFASSASTGSAPALFNAARFM 151
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 150 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 46
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 423 PEGLSLAKFTRT 388
>gb|BQ763259.1|BQ763259 EBro02_SQ007_P18_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_P18 5', mRNA sequence
Length = 526
Score = 144 bits (308), Expect(2) = 1e-042
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 311 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 174
Score = 49.6 bits (102), Expect(2) = 1e-042
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LL+ SA S + GS+PA+FNAAR M
Sbjct: 37 YSMAALIKLGSLLKQSAFASSASTGSAPALFNAARFM 147
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 146 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 42
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 419 PEGLSLAKFTRT 384
>gb|BE060883.3|BE060883 HVSMEg0013L11f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013L11f, mRNA sequence
Length = 726
Score = 139 bits (299), Expect(2) = 3e-042
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 357
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR RVN A+ERP+G
Sbjct: 358 KGMDGQELGGRNARVNFAHERPSG 429
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 320 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 183
Score = 52.8 bits (109), Expect(2) = 3e-042
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +1
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 1 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 156
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 155 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 51
>gb|BF065586.1|BF065586 HV_CEb0012N15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012N15f, mRNA sequence
Length = 725
Score = 142 bits (305), Expect(2) = 3e-042
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRS+GFGFV+++ + A A
Sbjct: 307 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSKGFGFVSFASEEDAGNAA 486
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 487 KGMDGQELGGRNVRVNFANERPSG 558
Score = 78.0 bits (164), Expect(3) = 4e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 449 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 312
Score = 49.6 bits (102), Expect(2) = 3e-042
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LL+ SA S + GS+PA+FNAAR M
Sbjct: 175 YSMAALIKLGSLLKQSAFASSASTGSAPALFNAARFM 285
Score = 49.2 bits (101), Expect(3) = 4e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 284 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 180
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 557 PEGLSLAKFTRT 522
>gb|BQ753625.1|BQ753625 EBan01_SQ004_M15_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M15 5', mRNA sequence
Length = 417
Score = 141 bits (302), Expect(2) = 9e-042
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 466 SAMDGKEIDGRQVRVNMANERPA 398
MDG+E+ GR VRVN ANERP+
Sbjct: 349 KGMDGQELGGRNVRVNFANERPS 417
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 311 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 174
Score = 49.6 bits (102), Expect(2) = 9e-042
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LL+ SA S + GS+PA+FNAAR M
Sbjct: 37 YSMAALIKLGSLLKQSAFASSASTGSAPALFNAARFM 147
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 146 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 42
>gb|BQ469633.1|BQ469633 HZ01G11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G11
5-PRIME, mRNA sequence
Length = 388
Score = 144 bits (308), Expect(2) = 9e-042
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 134 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 313
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 314 KGMDGQELGGRNVRVNFANERPSG 385
Score = 78.0 bits (164), Expect(3) = 3e-024
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 276 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 139
Score = 49.6 bits (102), Expect(3) = 3e-024
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 111 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAL 7
Score = 46.9 bits (96), Expect(2) = 9e-042
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / +2
Query: 748 AAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
AA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 11 AALIKLGSLLRQSAFASSASTGSAPALFNAARFM 112
Score = 22.1 bits (42), Expect(3) = 3e-024
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 384 PEGLSLAKFTRT 349
>gb|BF264077.3|BF264077 HV_CEa0008H13f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0008H13f, mRNA sequence
Length = 438
Score = 138 bits (295), Expect(2) = 3e-041
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTE RVITDRETGRSRG GFV+++ + A A
Sbjct: 175 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTETRVITDRETGRSRGCGFVSFASEEDAGNAA 354
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
+MDG E+ GR VRVN ANERP+G
Sbjct: 355 KSMDGHELGGRNVRVNFANERPSG 426
Score = 75.8 bits (159), Expect(3) = 2e-023
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T SVTSPKL NASLS SS PQ+RPP SL
Sbjct: 317 TKPHPLDLPVSLSVMTRVSVTSPKL*NASLSE*SSVPQARPPTKSL 180
Score = 51.0 bits (105), Expect(2) = 3e-041
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 43 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 153
Score = 49.2 bits (101), Expect(3) = 2e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 152 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 48
Score = 22.1 bits (42), Expect(3) = 2e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 425 PEGLSLAKFTRT 390
>gb|BF257818.2|BF257818 HVSMEf0013O18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013O18f, mRNA sequence
Length = 490
Score = 137 bits (294), Expect(2) = 4e-041
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL G DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 173 SSKLFVGGLARGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 352
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 353 KGMDGQELXGRNVRVNFANERPSG 424
Score = 76.2 bits (160), Expect(3) = 1e-023
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS P++RPP SL
Sbjct: 315 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPRARPPTKSL 178
Score = 51.0 bits (105), Expect(2) = 4e-041
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +2
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 41 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 151
Score = 49.2 bits (101), Expect(3) = 1e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 150 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 46
Score = 22.1 bits (42), Expect(3) = 1e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 423 PEGLSLAKFTRT 388
>gb|BG368461.1|BG368461 HVSMEi0019B01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019B01f, mRNA sequence
Length = 622
Score = 144 bits (309), Expect(2) = 2e-040
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 191 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 370
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
+MDG+E+ GR VRVN ANERP+G
Sbjct: 371 KSMDGQELXGRNVRVNFANERPSG 442
Score = 78.0 bits (164), Expect(3) = 3e-022
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 333 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 196
Score = 42.8 bits (87), Expect(3) = 3e-022
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKA 746
M RAALN AG +P L +ALC RR PSL++A
Sbjct: 168 MKRAALNRAGAKPVDALLAKALCXRRLPSLMRA 70
Score = 41.8 bits (85), Expect(2) = 2e-040
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -3 / +2
Query: 763 LVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
L F A KLG LL SA S + G +PA+FNAAR M
Sbjct: 53 LYFHWRALIKLGSLLXQSAFASSASTGFAPALFNAARFM 169
Score = 22.1 bits (42), Expect(3) = 3e-022
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 441 PEGLSLAKFTRT 406
>gb|BG344945.2|BG344945 HVSMEg0018A02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018A02f, mRNA sequence
Length = 891
Score = 138 bits (297), Expect(2) = 5e-040
Identities = 56/84 (66%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SF EVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 168 SSKLFVGGLAWGTDDHSLKEAFQSF*EVTEARVITDRETGRSRGFGFVSFASEEDAXNAA 347
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
+MDG+E+ G+ VRVN ANERP+G
Sbjct: 348 KSMDGQELGGKNVRVNFANERPSG 419
Score = 74.4 bits (156), Expect(3) = 4e-022
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTS KL NASLS SS PQ+RPP SL
Sbjct: 310 TKPNPLDLPVSLSVMTRASVTSQKL*NASLSE*SSVPQARPPTKSL 173
Score = 46.0 bits (94), Expect(3) = 4e-022
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3 / -3
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR P +++AA+
Sbjct: 145 MKRAALNRAGAEPVDALLAKALCLRRLPRMIRAAM 41
Score = 46.0 bits (94), Expect(2) = 5e-040
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA LG LLR SA S + GS+PA+FNAAR M
Sbjct: 36 YSMAARIILGSLLRQSAFASSASTGSAPALFNAARFM 146
Score = 22.1 bits (42), Expect(3) = 4e-022
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 418 PEGLSLAKFTRT 383
>gb|BU996923.1|BU996923 HI06E18r HI Hordeum vulgare subsp. vulgare cDNA clone HI06E18
5-PRIME, mRNA sequence
Length = 532
Score = 144 bits (308), Expect(2) = 1e-039
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 175 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 354
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 355 KGMDGQELGGRNVRVNFANERPSG 426
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 317 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 180
Score = 41.4 bits (84), Expect(3) = 7e-022
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3 / -2
Query: 660 ALNTAGEEPPVIPLTRALCLRRPPSLLKAAIANT 761
++N AG EP L +ALCLRR PSL++AA+ T
Sbjct: 141 SVNRAGAEPVDALLAKALCLRRLPSLMRAAMNKT 40
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -3 / +2
Query: 787 SYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAV 668
S ++ PS V MAA KLG LLR SA S + GS+PA+
Sbjct: 14 SAQARPSRGVLFMAALIKLGSLLRQSAFASSASTGSAPAL 133
Score = 22.1 bits (42), Expect(3) = 7e-022
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 425 PEGLSLAKFTRT 390
>gb|BQ762398.1|BQ762398 EBro01_SQ005_P15_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_P15 5', mRNA sequence
Length = 494
Score = 86.8 bits (183), Expect(3) = 4e-039
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGF 506
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSR F
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRRVWF 314
Score = 67.0 bits (140), Expect(3) = 2e-021
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / -2
Query: 519 LDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
LDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 301 LDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 179
Score = 62.5 bits (130), Expect(3) = 4e-039
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = -3 / +1
Query: 517 GFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
GFGFV+++ + A A MDG+E+ GR VRVN ANERP+G R
Sbjct: 304 GFGFVSFASEEDAGNAAKGMDGQELGGRNVRVNFANERPSGXR 432
Score = 51.0 bits (105), Expect(3) = 4e-039
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 42 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 152
Score = 49.2 bits (101), Expect(3) = 2e-021
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 151 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 47
Score = 24.0 bits (46), Expect(3) = 2e-021
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 390 RFPAGLSLAMLTRT 431
R P GLSLA TRT
Sbjct: 431 RXPEGLSLAKFTRT 390
>gb|CA032937.1|CA032937 HX14K06r HX Hordeum vulgare subsp. vulgare cDNA clone HX14K06
5-PRIME, mRNA sequence
Length = 445
Score = 144 bits (308), Expect(2) = 7e-039
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 165 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 344
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 345 KGMDGQELXGRNVRVNFANERPSG 416
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 307 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 170
Score = 39.6 bits (80), Expect(3) = 2e-021
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / -3
Query: 660 ALNTAGEEPPVIPLTRALCLRRPPSLLKAA 749
++N AG EP L +ALCLRR PSL++AA
Sbjct: 131 SVNRAGAEPVDALLAKALCLRRLPSLMRAA 42
Score = 37.3 bits (75), Expect(2) = 7e-039
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3 / +1
Query: 772 PSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAV 668
P +V +AA KLG LLR SA S + GS+PA+
Sbjct: 19 PPEVVLFLAALIKLGSLLRQSAFASSASTGSAPAL 123
Score = 22.1 bits (42), Expect(3) = 2e-021
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 396 PAGLSLAMLTRT 431
P GLSLA TRT
Sbjct: 415 PEGLSLAKFTRT 380
>gb|BE060141.3|BE060141 HVSMEg0011A10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011A10f, mRNA sequence
Length = 578
Score = 119 bits (254), Expect(3) = 2e-038
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -3 / +3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 177 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 356
Query: 466 SAMDGKEIDGRQ 431
MDG+E+ G++
Sbjct: 357 KGMDGQELGGKE 392
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 319 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 182
Score = 51.0 bits (105), Expect(3) = 2e-038
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 45 YSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 155
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 154 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 50
Score = 27.6 bits (54), Expect(3) = 2e-038
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 451 KEIDGRQVRVNMANERPAG 395
+ + R V VN+ANERP+G
Sbjct: 373 RSLGERNVPVNLANERPSG 429
>gb|BE411073.1|BE411073 ISC002.A11F990322 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC002.A11, mRNA sequence
Length = 428
Score = 144 bits (308), Expect(3) = 2e-038
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 146 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 325
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 326 KGMDGQELGGRNVRVNFANERPSG 397
Score = 31.3 bits (62), Expect(3) = 2e-038
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3 / +1
Query: 757 FAMAAFNKLGGLLRHSALVSGITGGS 680
++MAA KLG LLR SA S + GS
Sbjct: 13 YSMAALIKLGSLLRQSAFASSASTGS 90
Score = 22.6 bits (43), Expect(3) = 2e-038
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 679 SPAVFNAARLM 647
+PA+FNAAR M
Sbjct: 92 APALFNAARFM 124
>gb|CB858507.1|CB858507 HI07E19w HI Hordeum vulgare subsp. vulgare cDNA clone HI07E19
3-PRIME, mRNA sequence
Length = 648
Score = 144 bits (308), Expect(2) = 3e-037
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 559 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 380
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 379 KGMDGQELGGRNVRVNFANERPSG 308
Score = 31.8 bits (63), Expect(2) = 3e-037
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 712 SALVSGITGGSSPAVFNAARLM 647
SA S + GS+PA+FNAAR M
Sbjct: 646 SAFASSASTGSAPALFNAARFM 581
>gb|BQ762001.1|BQ762001 EBpi01_SQ005_C18_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_C18 5', mRNA sequence
Length = 520
Score = 74.8 bits (157), Expect(3) = 2e-036
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -3 / +1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRE 533
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRE
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRE 291
Score = 63.4 bits (132), Expect(3) = 2e-036
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -3 / +1
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 395
+RGFGFV+++ + A A MDG+E+ GR VRVN ANERP+G
Sbjct: 298 ARGFGFVSFASEEDAGNAAKGMDGQELGGRNVRVNFANERPSG 426
Score = 52.8 bits (109), Expect(3) = 2e-036
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +1
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 1 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 156
>gb|BM369784.2|BM369784 EBem07_SQ004_J16_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_J16 5', mRNA sequence
Length = 393
Score = 118 bits (253), Expect(2) = 5e-036
Identities = 48/71 (67%), Positives = 56/71 (78%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 466 SAMDGKEIDGR 434
MDG E+ GR
Sbjct: 359 KGMDGHELGGR 391
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 321 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 184
Score = 52.8 bits (109), Expect(2) = 5e-036
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 2 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 157
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 156 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 52
>gb|BU976485.1|BU976485 HA03M13u HA Hordeum vulgare subsp. vulgare cDNA clone HA03M13
3-PRIME, mRNA sequence
Length = 606
Score = 144 bits (308), Expect(2) = 7e-036
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / -3
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 535 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 356
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 355 KGMDGQELGGRNVRVNFANERPSG 284
Score = 27.2 bits (53), Expect(2) = 7e-036
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 685 GSSPAVFNAARLM 647
GS+PA+FNAAR M
Sbjct: 595 GSAPALFNAARFM 557
>gb|BM375452.2|BM375452 EBem06_SQ003_G07_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_G07 5', mRNA sequence
Length = 388
Score = 117 bits (250), Expect(2) = 1e-035
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 466 SAMDGKEIDG 437
MDG+E+ G
Sbjct: 359 KGMDGQELGG 388
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 321 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 184
Score = 52.8 bits (109), Expect(2) = 1e-035
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 2 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 157
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 156 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 52
>gb|BM369618.2|BM369618 EBem07_SQ004_C08_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_C08 5', mRNA sequence
Length = 387
Score = 114 bits (243), Expect(2) = 1e-034
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = -3 / +2
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 466 SAMDGKEI 443
MDG E+
Sbjct: 359 KGMDGHEL 382
Score = 78.0 bits (164), Expect(2) = 8e-023
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 504 TKPKPLDLPVSLSVITLASVTSPKLLNASLSFTSSTPQSRPPINSL 641
TKP PLDLPVSLSV+T ASVTSPKL NASLS SS PQ+RPP SL
Sbjct: 321 TKPNPLDLPVSLSVMTRASVTSPKL*NASLSE*SSVPQARPPTKSL 184
Score = 52.8 bits (109), Expect(2) = 1e-034
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -3 / +2
Query: 802 RRLSCSYRSSPSGLVFAMAAFNKLGGLLRHSALVSGITGGSSPAVFNAARLM 647
RRL G ++MAA KLG LLR SA S + GS+PA+FNAAR M
Sbjct: 2 RRLVSPQARPSRG*SYSMAALIKLGSLLRQSAFASSASTGSAPALFNAARFM 157
Score = 49.2 bits (101), Expect(2) = 8e-023
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 648 MSRAALNTAGEEPPVIPLTRALCLRRPPSLLKAAI 752
M RAALN AG EP L +ALCLRR PSL++AA+
Sbjct: 156 MKRAALNRAGAEPVDALLAKALCLRRLPSLMRAAM 52
>gb|BJ461068.1|BJ461068 BJ461068 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43g11 3', mRNA sequence
Length = 609
Score = 144 bits (308), Expect = 1e-033
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = -3 / -1
Query: 646 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 467
S+KLF+GGL WG DD L+EAF SFGEVTEARVITDRETGRSRGFGFV+++ + A A
Sbjct: 609 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 430
Query: 466 SAMDGKEIDGRQVRVNMANERPAG 395
MDG+E+ GR VRVN ANERP+G
Sbjct: 429 KGMDGQELGGRNVRVNFANERPSG 358
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 397,669,191
Number of Sequences: 312970
Number of extensions: 5870724
Number of successful extensions: 44032
Number of sequences better than 1.0e-020: 536
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11662735703
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)