TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131605.2.2
(713 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU980221.1|BU980221 HA20A14r HA Hordeum vulgare subsp. v... 159 1e-038
gb|CA029789.1|CA029789 HX05D14r HX Hordeum vulgare subsp. v... 159 1e-038
gb|BQ466675.1|BQ466675 HS01D19T HS Hordeum vulgare subsp. v... 159 1e-038
gb|BM375177.2|BM375177 EBem06_SQ002_J08_R embryo, 21 DPA, n... 159 1e-038
gb|BQ754602.1|BQ754602 EBed01_SQ003_E13_R endosperm, 6 DPA,... 159 1e-038
gb|BQ762318.1|BQ762318 EBro01_SQ005_O12_R root, 3 week, hyd... 159 1e-038
gb|CA020339.1|CA020339 HZ36A05r HZ Hordeum vulgare subsp. v... 159 1e-038
gb|BI777536.2|BI777536 EBro04_SQ001_I10_R root, 3 week, sal... 159 1e-038
gb|BU979394.1|BU979394 HA16A06r HA Hordeum vulgare subsp. v... 159 1e-038
gb|BM375548.2|BM375548 EBem06_SQ003_K20_R embryo, 21 DPA, n... 159 1e-038
gb|CA020290.1|CA020290 HV14N24r HV Hordeum vulgare subsp. v... 159 1e-038
gb|BU981687.1|BU981687 HA24F12r HA Hordeum vulgare subsp. v... 159 1e-038
gb|CA000594.1|CA000594 HS07P17u HS Hordeum vulgare subsp. v... 159 1e-038
gb|BM444594.1|BM444594 EBem09_SQ005_N09_R embryo, 1 Day ger... 159 1e-038
gb|CA020311.1|CA020311 HV14O22r HV Hordeum vulgare subsp. v... 159 1e-038
gb|BI780853.2|BI780853 EBma05_SQ001_D09_R maternal, 12 DPA,... 159 1e-038
gb|BQ762406.1|BQ762406 EBro01_SQ005_C19_R root, 3 week, hyd... 159 1e-038
gb|BQ458965.1|BQ458965 HA02L05r HA Hordeum vulgare subsp. v... 159 1e-038
gb|CK122866.1|CK122866 BES1824106g17 BES1824 Hordeum vulgar... 159 1e-038
gb|BM375526.2|BM375526 EBem06_SQ003_J18_R embryo, 21 DPA, n... 159 1e-038
gb|BU978564.1|BU978564 HA13J16r HA Hordeum vulgare subsp. v... 159 1e-038
gb|BQ660913.1|BQ660913 HM01B04w HM Hordeum vulgare subsp. v... 159 1e-038
gb|BE455459.2|BE455459 HVSMEg0017E05f Hordeum vulgare pre-a... 159 1e-038
gb|BE060122.3|BE060122 HVSMEg0011I14f Hordeum vulgare pre-a... 159 1e-038
gb|BM444266.1|BM444266 EBem09_SQ004_K09_R embryo, 1 Day ger... 159 1e-038
gb|BM444813.1|BM444813 EBem09_SQ006_I23_R embryo, 1 Day ger... 159 1e-038
gb|AJ434287.1|AJ434287 AJ434287 S00002 Hordeum vulgare subs... 159 1e-038
gb|AJ462581.1|AJ462581 AJ462581 S00002 Hordeum vulgare subs... 159 1e-038
gb|BJ451335.1|BJ451335 BJ451335 K. Sato unpublished cDNA li... 159 1e-038
gb|BJ458832.1|BJ458832 BJ458832 K. Sato unpublished cDNA li... 159 1e-038
gb|BQ468369.1|BQ468369 HM01B04T HM Hordeum vulgare subsp. v... 159 1e-038
gb|BQ656643.1|BQ656643 HA02L05u HA Hordeum vulgare subsp. v... 159 1e-038
gb|BQ662407.1|BQ662407 HS02D19u HS Hordeum vulgare subsp. v... 159 1e-038
gb|BQ767317.1|BQ767317 EBro08_SQ008_F17_R root, 3 week, dro... 159 1e-038
gb|BQ767711.1|BQ767711 EBro08_SQ009_K17_R root, 3 week, dro... 159 1e-038
gb|BU974760.1|BU974760 HB29A08r BC Hordeum vulgare subsp. v... 159 1e-038
gb|BU977257.1|BU977257 HA11C05r HA Hordeum vulgare subsp. v... 159 1e-038
gb|BU977258.1|BU977258 HA11C05u HA Hordeum vulgare subsp. v... 159 1e-038
gb|BU981119.1|BU981119 HA22L04r HA Hordeum vulgare subsp. v... 159 1e-038
gb|BU982009.1|BU982009 HA25E05r HA Hordeum vulgare subsp. v... 159 1e-038
gb|BU999552.1|BU999552 HI14N17r HI Hordeum vulgare subsp. v... 159 1e-038
gb|CA000928.1|CA000928 HS06I11u HS Hordeum vulgare subsp. v... 159 1e-038
gb|CA032599.1|CA032599 HX13J18r HX Hordeum vulgare subsp. v... 159 1e-038
gb|CV057924.1|CV057924 BNEL32d3 Barley EST endosperm librar... 159 1e-038
gb|CK122306.1|CK122306 BES1824102n03 BES1824 Hordeum vulgar... 159 1e-038
gb|CK124393.1|CK124393 BES1824108k21 BES1824 Hordeum vulgar... 159 1e-038
gb|CK125078.1|CK125078 BES1824106i18 BES1824 Hordeum vulgar... 159 1e-038
gb|BM376287.2|BM376287 EBma01_SQ002_O17_R maternal, 4 DPA, ... 158 3e-038
gb|BM376767.2|BM376767 EBem05_SQ003_C21_R embryo, 14 DPA, n... 158 3e-038
gb|BM368233.2|BM368233 EBed01_SQ002_I21_R endosperm, 6 DPA,... 158 4e-038
gb|BM369481.2|BM369481 EBem07_SQ003_L10_R embryo, 28 DPA, n... 158 4e-038
gb|BM369523.2|BM369523 EBem07_SQ003_N10_R embryo, 28 DPA, n... 158 4e-038
gb|BQ765983.1|BQ765983 EBro03_SQ008_P14_R root, 3 week, wat... 156 8e-038
gb|BM374783.1|BM374783 EBma05_SQ002_M23_R maternal, 12 DPA,... 156 8e-038
gb|BM376400.2|BM376400 EBem05_SQ002_B24_R embryo, 14 DPA, n... 156 9e-038
gb|BG414983.2|BG414983 HVSMEk0004I15f Hordeum vulgare testa... 156 1e-037
gb|BM369011.2|BM369011 EBem07_SQ002_E16_R embryo, 28 DPA, n... 156 1e-037
gb|CV062199.1|CV062199 BNEL77d5 Barley EST endosperm librar... 155 2e-037
gb|CV064007.1|CV064007 BNEL96c9 Barley EST endosperm librar... 155 2e-037
gb|BE421664.1|BE421664 HWM012cE.08r ITEC HWM Barley Leaf Li... 155 2e-037
gb|AL507068.1|AL507068 AL507068 Hordeum vulgare Barke devel... 155 2e-037
gb|AL507358.1|AL507358 AL507358 Hordeum vulgare Barke devel... 155 2e-037
gb|AL507378.1|AL507378 AL507378 Hordeum vulgare Barke devel... 155 2e-037
gb|AL509573.1|AL509573 AL509573 Hordeum vulgare Barke devel... 155 2e-037
gb|BF621179.3|BF621179 HVSMEa0004N16f Hordeum vulgare seedl... 155 2e-037
gb|BF622675.3|BF622675 HVSMEa0007M07f Hordeum vulgare seedl... 155 2e-037
gb|BF631514.3|BF631514 HVSMEb0016D21f Hordeum vulgare seedl... 155 2e-037
gb|BF258722.3|BF258722 HVSMEf0016I03f Hordeum vulgare seedl... 155 2e-037
gb|BE601697.3|BE601697 HVSMEh0099D17f Hordeum vulgare 5-45 ... 155 2e-037
gb|AJ435946.1|AJ435946 AJ435946 S00002 Hordeum vulgare subs... 155 2e-037
gb|AJ462898.1|AJ462898 AJ462898 S00002 Hordeum vulgare subs... 155 2e-037
gb|AJ462900.1|AJ462900 AJ462900 S00002 Hordeum vulgare subs... 155 2e-037
gb|BQ460224.1|BQ460224 HA06N21r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BQ460584.1|BQ460584 HA06I06r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BQ460610.1|BQ460610 HA06H09r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BQ462777.1|BQ462777 HI01P15T HI Hordeum vulgare subsp. v... 155 2e-037
gb|BQ463312.1|BQ463312 HI04M02r HI Hordeum vulgare subsp. v... 155 2e-037
gb|BQ656372.1|BQ656372 HA04L08u HA Hordeum vulgare subsp. v... 155 2e-037
gb|BQ660334.1|BQ660334 HI01P15w HI Hordeum vulgare subsp. v... 155 2e-037
gb|BM376532.2|BM376532 EBem05_SQ002_H21_R embryo, 14 DPA, n... 155 2e-037
gb|BI779905.2|BI779905 EBem07_SQ001_I19_R embryo, 28 DPA, n... 155 2e-037
gb|BM099285.2|BM099285 EBes01_SQ002_M16_R embryo sac, 4-6 D... 155 2e-037
gb|BM370879.2|BM370879 EBro04_SQ002_K09_R root, 3 week, sal... 155 2e-037
gb|BI777992.2|BI777992 EBro07_SQ001_L07_R root, 3 week, red... 155 2e-037
gb|BM370627.2|BM370627 EBro08_SQ004_M15_R root, 3 week, dro... 155 2e-037
gb|BQ754654.1|BQ754654 EBed01_SQ003_G21_R endosperm, 6 DPA,... 155 2e-037
gb|BQ766505.1|BQ766505 EBro08_SQ006_D10_R root, 3 week, dro... 155 2e-037
gb|BQ766923.1|BQ766923 EBro08_SQ007_B15_R root, 3 week, dro... 155 2e-037
gb|BQ767745.1|BQ767745 EBro08_SQ009_A21 _R root, 3 week, dr... 155 2e-037
gb|BU973402.1|BU973402 HB24N01r BC Hordeum vulgare subsp. v... 155 2e-037
gb|BU978865.1|BU978865 HA14H22r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BU979280.1|BU979280 HA15K16r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BU980819.1|BU980819 HA21M17r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BU981873.1|BU981873 HA24O03r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BU984048.1|BU984048 HA31N10r HA Hordeum vulgare subsp. v... 155 2e-037
gb|BU987345.1|BU987345 HF14I03r HF Hordeum vulgare subsp. v... 155 2e-037
gb|BU996242.1|BU996242 HM12P22r HM Hordeum vulgare subsp. v... 155 2e-037
gb|BU999650.1|BU999650 HI15D15r HI Hordeum vulgare subsp. v... 155 2e-037
gb|CA010543.1|CA010543 HT09L23u HT Hordeum vulgare subsp. v... 155 2e-037
gb|CA013697.1|CA013697 HT09D19r HT Hordeum vulgare subsp. v... 155 2e-037
gb|CA017559.1|CA017559 HV05I23r HV Hordeum vulgare subsp. v... 155 2e-037
gb|CA017812.1|CA017812 HV06F15r HV Hordeum vulgare subsp. v... 155 2e-037
gb|CA021715.1|CA021715 HZ40O08r HZ Hordeum vulgare subsp. v... 155 2e-037
gb|CA026651.1|CA026651 HZ56I16r HZ Hordeum vulgare subsp. v... 155 2e-037
gb|CA032772.1|CA032772 HX14C16r HX Hordeum vulgare subsp. v... 155 2e-037
gb|CB874371.1|CB874371 HX05B05w HX Hordeum vulgare subsp. v... 155 2e-037
gb|CV055835.1|CV055835 BNEL124a11 Barley EST endosperm libr... 155 2e-037
gb|CV056561.1|CV056561 BNEL19B5 Barley EST endosperm librar... 155 2e-037
gb|CV058555.1|CV058555 BNEL39c5 Barley EST endosperm librar... 155 2e-037
gb|CK123591.1|CK123591 BES1824104j01 BES1824 Hordeum vulgar... 155 2e-037
gb|CK123785.1|CK123785 BES1824105f16 BES1824 Hordeum vulgar... 155 2e-037
gb|CK125259.1|CK125259 BES1824107i08 BES1824 Hordeum vulgar... 155 2e-037
gb|BQ764996.1|BQ764996 EBca01_SQ005_A17_R carpel, pre-anthe... 155 2e-037
gb|BQ768250.1|BQ768250 EBro08_SQ011_M04_R root, 3 week, dro... 155 2e-037
gb|CA022524.1|CA022524 HZ43H19r HZ Hordeum vulgare subsp. v... 155 2e-037
gb|BG416022.2|BG416022 HVSMEk0009H11f Hordeum vulgare testa... 154 5e-037
gb|BM374892.1|BM374892 EBma05_SQ003_G18_R maternal, 12 DPA,... 154 5e-037
gb|BM097628.2|BM097628 EBem04_SQ002_E04_R embryo, 12 DPA, n... 154 5e-037
gb|BM368520.2|BM368520 EBem08_SQ002_J16_R embryo, 40 DPA, n... 154 5e-037
gb|BM099027.2|BM099027 EBpi05_SQ002_L20_R pistil, 8 DPA, no... 154 5e-037
gb|CK124303.1|CK124303 BES1824108e24 BES1824 Hordeum vulgar... 154 5e-037
gb|BJ466611.1|BJ466611 BJ466611 K. Sato unpublished cDNA li... 153 9e-037
gb|AJ462899.1|AJ462899 AJ462899 S00002 Hordeum vulgare subs... 153 1e-036
gb|BM097523.2|BM097523 EBem04_SQ001_M02_R embryo, 12 DPA, n... 153 1e-036
gb|BM369146.2|BM369146 EBem07_SQ002_L08_R embryo, 28 DPA, n... 153 1e-036
gb|BM098528.2|BM098528 EBem08_SQ003_F04_R embryo, 40 DPA, n... 153 1e-036
gb|BM373254.2|BM373254 EBma04_SQ003_L18_R maternal, 10 DPA,... 153 1e-036
gb|BM097118.2|BM097118 EBpi07_SQ002_H07_R pistil, 12 DPA, n... 153 1e-036
gb|AJ462897.1|AJ462897 AJ462897 S00002 Hordeum vulgare subs... 152 2e-036
gb|BM375093.2|BM375093 EBem06_SQ002_F05_R embryo, 21 DPA, n... 152 2e-036
gb|BI777569.2|BI777569 EBro04_SQ001_J23_R root, 3 week, sal... 151 3e-036
gb|BE455633.3|BE455633 HVSMEg0018H04f Hordeum vulgare pre-a... 151 4e-036
gb|BG299764.1|BG299764 HVSMEa0021L12f Hordeum vulgare seedl... 150 6e-036
gb|BM369027.2|BM369027 EBem07_SQ002_F13_R embryo, 28 DPA, n... 150 6e-036
gb|BM376542.1|BM376542 EBem05_SQ002_I10_R embryo, 14 DPA, n... 146 1e-034
gb|AL510563.1|AL510563 AL510563 Hordeum vulgare Barke devel... 140 9e-033
gb|BU994143.1|BU994143 HM05O08r HM Hordeum vulgare subsp. v... 139 1e-032
gb|BF259864.3|BF259864 HVSMEf0020H15f Hordeum vulgare seedl... 113 2e-032
gb|CV053896.1|CV053896 BNEL104d4 Barley EST endosperm libra... 138 2e-032
gb|BU983870.1|BU983870 HA31E18r HA Hordeum vulgare subsp. v... 99 3e-032
gb|AJ462580.1|AJ462580 AJ462580 S00002 Hordeum vulgare subs... 136 3e-032
gb|CA010622.1|CA010622 HT09D19u HT Hordeum vulgare subsp. v... 135 3e-031
gb|CA013877.1|CA013877 HT09L23r HT Hordeum vulgare subsp. v... 95 4e-031
gb|BJ463665.1|BJ463665 BJ463665 K. Sato unpublished cDNA li... 131 5e-030
gb|BM098831.2|BM098831 EBpi05_SQ002_D01_R pistil, 8 DPA, no... 130 7e-030
gb|BU978372.1|BU978372 HA13A14r HA Hordeum vulgare subsp. v... 100 2e-029
gb|BG369737.2|BG369737 HVSMEi0025M05f Hordeum vulgare 20 DA... 127 9e-029
gb|BU983118.1|BU983118 HA28J20r HA Hordeum vulgare subsp. v... 97 8e-028
gb|BM373820.2|BM373820 EBma03_SQ002_M23_R maternal, 8 DPA, ... 115 4e-026
gb|BQ756374.1|BQ756374 EBem08_SQ001_L15_R embryo, 40 DPA, n... 115 2e-025
gb|BU983925.1|BU983925 HA31H14r HA Hordeum vulgare subsp. v... 110 5e-024
gb|AJ462896.1|AJ462896 AJ462896 S00002 Hordeum vulgare subs... 110 5e-024
gb|BJ466534.1|BJ466534 BJ466534 K. Sato unpublished cDNA li... 110 8e-024
gb|CD240723.1|CD240723 LP10331 Lemma/palea-enriched cDNA li... 105 2e-022
gb|CD240748.1|CD240748 LP20312 Lemma/palea-enriched cDNA li... 105 2e-022
>gb|BU980221.1|BU980221 HA20A14r HA Hordeum vulgare subsp. vulgare cDNA clone HA20A14
5-PRIME, mRNA sequence
Length = 431
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 187 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 366
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 367 SSQQIFTRATNT*FTSCV 420
Score = 104 bits (222), Expect(2) = 5e-024
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = -3 / -1
Query: 450 NVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICL 271
N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVICL
Sbjct: 431 NRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVICL 252
Query: 270 YLGTXXXXXXXXXXXXSTALLT 205
YLGT STAL T
Sbjct: 251 YLGTSVSSLS*VAWSKSTALFT 186
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 390 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 211
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 210 VEEHRVV 190
Score = 26.3 bits (51), Expect(2) = 5e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 139 RRRTWPAWT 113
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 87 EEGEGPGGVV 116
>gb|CA029789.1|CA029789 HX05D14r HX Hordeum vulgare subsp. vulgare cDNA clone HX05D14
5-PRIME, mRNA sequence
Length = 471
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 331 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 152
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 151 SSQQIFTRATNT*FTSCV 98
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 84 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 263
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 264 LYLGTSVSSLS*VAWSKSTALFT 332
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 128 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 307
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 308 VEEHRVV 328
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 379 RRRTWPAWT 405
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / -2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 431 EEGEGPGGVV 402
>gb|BQ466675.1|BQ466675 HS01D19T HS Hordeum vulgare subsp. vulgare cDNA clone HS01D19
5-PRIME, mRNA sequence
Length = 489
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 146 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 325
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 326 SSQQIFTRATNT*FTSCV 379
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 393 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 214
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 213 LYLGTSVSSLS*VAWSKSTALFT 145
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 349 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 170
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 169 VEEHRVV 149
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 98 RRRTWPAWT 72
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 46 EEGEGPGGVV 75
>gb|BM375177.2|BM375177 EBem06_SQ002_J08_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_J08 5', mRNA sequence
Length = 513
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 177 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 356
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 357 SSQQIFTRATNT*FTSCV 410
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 424 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 245
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 244 LYLGTSVSSLS*VAWSKSTALFT 176
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 380 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 201
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 200 VEEHRVV 180
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 129 RRRTWPAWT 103
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 77 EEGEGPGGVV 106
>gb|BQ754602.1|BQ754602 EBed01_SQ003_E13_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_E13 5', mRNA sequence
Length = 514
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 162 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 341
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 342 SSQQIFTRATNT*FTSCV 395
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 409 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 230
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 229 LYLGTSVSSLS*VAWSKSTALFT 161
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 365 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 186
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 185 VEEHRVV 165
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 114 RRRTWPAWT 88
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 62 EEGEGPGGVV 91
>gb|BQ762318.1|BQ762318 EBro01_SQ005_O12_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_O12 5', mRNA sequence
Length = 514
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 159 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 338
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 339 SSQQIFTRATNT*FTSCV 392
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 406 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 227
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 226 LYLGTSVSSLS*VAWSKSTALFT 158
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 362 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 183
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 182 VEEHRVV 162
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 111 RRRTWPAWT 85
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 59 EEGEGPGGVV 88
>gb|CA020339.1|CA020339 HZ36A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36A05
5-PRIME, mRNA sequence
Length = 517
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 168 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 347
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 348 SSQQIFTRATNT*FTSCV 401
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 415 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 236
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 235 LYLGTSVSSLS*VAWSKSTALFT 167
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 371 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 192
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 191 VEEHRVV 171
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 120 RRRTWPAWT 94
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 68 EEGEGPGGVV 97
>gb|BI777536.2|BI777536 EBro04_SQ001_I10_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_I10 5', mRNA sequence
Length = 521
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 171 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 350
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 351 SSQQIFTRATNT*FTSCV 404
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 418 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 239
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 238 LYLGTSVSSLS*VAWSKSTALFT 170
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 374 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 195
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 194 VEEHRVV 174
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 123 RRRTWPAWT 97
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 71 EEGEGPGGVV 100
>gb|BU979394.1|BU979394 HA16A06r HA Hordeum vulgare subsp. vulgare cDNA clone HA16A06
5-PRIME, mRNA sequence
Length = 525
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 174 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 353
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 354 SSQQIFTRATNT*FTSCV 407
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 421 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 242
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 241 LYLGTSVSSLS*VAWSKSTALFT 173
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 377 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 198
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 197 VEEHRVV 177
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 126 RRRTWPAWT 100
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 74 EEGEGPGGVV 103
>gb|BM375548.2|BM375548 EBem06_SQ003_K20_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_K20 5', mRNA sequence
Length = 529
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 168 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 347
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 348 SSQQIFTRATNT*FTSCV 401
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 415 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 236
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 235 LYLGTSVSSLS*VAWSKSTALFT 167
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 371 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 192
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 191 VEEHRVV 171
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 120 RRRTWPAWT 94
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 68 EEGEGPGGVV 97
>gb|CA020290.1|CA020290 HV14N24r HV Hordeum vulgare subsp. vulgare cDNA clone HV14N24
5-PRIME, mRNA sequence
Length = 533
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 361
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 362 SSQQIFTRATNT*FTSCV 415
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 429 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 250
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 249 LYLGTSVSSLS*VAWSKSTALFT 181
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 385 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 206
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 205 VEEHRVV 185
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 134 RRRTWPAWT 108
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 82 EEGEGPGGVV 111
>gb|BU981687.1|BU981687 HA24F12r HA Hordeum vulgare subsp. vulgare cDNA clone HA24F12
5-PRIME, mRNA sequence
Length = 542
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 361
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 362 SSQQIFTRATNT*FTSCV 415
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 429 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 250
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 249 LYLGTSVSSLS*VAWSKSTALFT 181
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 385 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 206
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 205 VEEHRVV 185
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 134 RRRTWPAWT 108
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 82 EEGEGPGGVV 111
>gb|CA000594.1|CA000594 HS07P17u HS Hordeum vulgare subsp. vulgare cDNA clone HS07P17
3-PRIME, mRNA sequence
Length = 542
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 388 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 209
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 208 SSQQIFTRATNT*FTSCV 155
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 141 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 320
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 321 LYLGTSVSSLS*VAWSKSTALFT 389
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 185 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 364
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 365 VEEHRVV 385
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 436 RRRTWPAWT 462
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / -1
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 488 EEGEGPGGVV 459
>gb|BM444594.1|BM444594 EBem09_SQ005_N09_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_N09 5', mRNA sequence
Length = 545
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 156 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 335
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 336 SSQQIFTRATNT*FTSCV 389
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 403 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 224
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 223 LYLGTSVSSLS*VAWSKSTALFT 155
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 359 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 180
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 179 VEEHRVV 159
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 108 RRRTWPAWT 82
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 56 EEGEGPGGVV 85
>gb|CA020311.1|CA020311 HV14O22r HV Hordeum vulgare subsp. vulgare cDNA clone HV14O22
5-PRIME, mRNA sequence
Length = 546
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 166 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 345
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 346 SSQQIFTRATNT*FTSCV 399
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 413 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 234
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 233 LYLGTSVSSLS*VAWSKSTALFT 165
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 369 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 190
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 189 VEEHRVV 169
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 118 RRRTWPAWT 92
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 66 EEGEGPGGVV 95
>gb|BI780853.2|BI780853 EBma05_SQ001_D09_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_D09 5', mRNA sequence
Length = 550
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 162 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 341
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 342 SSQQIFTRATNT*FTSCV 395
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 409 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 230
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 229 LYLGTSVSSLS*VAWSKSTALFT 161
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 365 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 186
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 185 VEEHRVV 165
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 114 RRRTWPAWT 88
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 62 EEGEGPGGVV 91
>gb|BQ762406.1|BQ762406 EBro01_SQ005_C19_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_C19 5', mRNA sequence
Length = 549
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 158 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 337
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 338 SSQQIFTRATNT*FTSCV 391
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 405 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 226
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 225 LYLGTSVSSLS*VAWSKSTALFT 157
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 361 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 182
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 181 VEEHRVV 161
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 110 RRRTWPAWT 84
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 58 EEGEGPGGVV 87
>gb|BQ458965.1|BQ458965 HA02L05r HA Hordeum vulgare subsp. vulgare cDNA clone HA02L05
5-PRIME, mRNA sequence
Length = 556
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 166 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 345
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 346 SSQQIFTRATNT*FTSCV 399
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 413 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 234
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 233 LYLGTSVSSLS*VAWSKSTALFT 165
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 369 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 190
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 189 VEEHRVV 169
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 118 RRRTWPAWT 92
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 66 EEGEGPGGVV 95
>gb|CK122866.1|CK122866 BES1824106g17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G176 5-PRIME, mRNA sequence
Length = 557
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 145 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 324
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 325 SSQQIFTRATNT*FTSCV 378
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 392 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 213
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 212 LYLGTSVSSLS*VAWSKSTALFT 144
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 348 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 169
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 168 VEEHRVV 148
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 97 RRRTWPAWT 71
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 45 EEGEGPGGVV 74
>gb|BM375526.2|BM375526 EBem06_SQ003_J18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_J18 5', mRNA sequence
Length = 560
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 169 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 348
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 349 SSQQIFTRATNT*FTSCV 402
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 416 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 237
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 236 LYLGTSVSSLS*VAWSKSTALFT 168
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 372 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 193
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 192 VEEHRVV 172
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 121 RRRTWPAWT 95
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 69 EEGEGPGGVV 98
>gb|BU978564.1|BU978564 HA13J16r HA Hordeum vulgare subsp. vulgare cDNA clone HA13J16
5-PRIME, mRNA sequence
Length = 559
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 177 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 356
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 357 SSQQIFTRATNT*FTSCV 410
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 424 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 245
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 244 LYLGTSVSSLS*VAWSKSTALFT 176
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 380 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 201
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 200 VEEHRVV 180
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 129 RRRTWPAWT 103
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 77 EEGEGPGGVV 106
>gb|BQ660913.1|BQ660913 HM01B04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01B04
3-PRIME, mRNA sequence
Length = 562
Score = 159 bits (342), Expect(2) = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 416 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 237
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 236 SSQQIFTRATNT*FTSCV 183
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 169 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 348
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 349 LYLGTSVSSLS*VAWSKSTALFT 417
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 213 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 392
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 393 VEEHRVV 413
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 464 RRRTWPAWT 490
Score = 21.7 bits (41), Expect(2) = 1e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / -2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 516 EEGEGPGGVV 487
>gb|BE455459.2|BE455459 HVSMEg0017E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017E05f, mRNA sequence
Length = 593
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 183 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 362
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 363 SSQQIFTRATNT*FTSCV 416
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 430 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 251
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 250 LYLGTSVSSLS*VAWSKSTALFT 182
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 386 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 207
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 206 VEEHRVV 186
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 135 RRRTWPAWT 109
>gb|BE060122.3|BE060122 HVSMEg0011I14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011I14f, mRNA sequence
Length = 596
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 174 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 353
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 354 SSQQIFTRATNT*FTSCV 407
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 421 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 242
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 241 LYLGTSVSSLS*VAWSKSTALFT 173
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 377 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 198
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 197 VEEHRVV 177
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 126 RRRTWPAWT 100
>gb|BM444266.1|BM444266 EBem09_SQ004_K09_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_K09 5', mRNA sequence
Length = 440
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 68 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 247
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 248 SSQQIFTRATNT*FTSCV 301
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 315 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 136
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 135 LYLGTSVSSLS*VAWSKSTALFT 67
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 271 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 92
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 91 VEEHRVV 71
>gb|BM444813.1|BM444813 EBem09_SQ006_I23_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_I23 5', mRNA sequence
Length = 416
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 68 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 247
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 248 SSQQIFTRATNT*FTSCV 301
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 315 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 136
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 135 LYLGTSVSSLS*VAWSKSTALFT 67
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 271 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 92
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 91 VEEHRVV 71
>gb|AJ434287.1|AJ434287 AJ434287 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200065H04F1, mRNA sequence
Length = 460
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 63 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 242
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 243 SSQQIFTRATNT*FTSCV 296
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 310 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 131
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 130 LYLGTSVSSLS*VAWSKSTALFT 62
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 266 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 87
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 86 VEEHRVV 66
>gb|AJ462581.1|AJ462581 AJ462581 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200064A11F1, mRNA sequence
Length = 300
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 67 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 246
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 247 SSQQIFTRATNT*FTSCV 300
Score = 103 bits (220), Expect = 1e-021
Identities = 48/78 (61%), Positives = 53/78 (67%)
Frame = -3 / -2
Query: 438 TQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICLYLGT 259
TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVICLYLGT
Sbjct: 299 TQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVICLYLGT 120
Query: 258 XXXXXXXXXXXXSTALLT 205
STAL T
Sbjct: 119 SVSSLS*VAWSKSTALFT 66
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 270 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 91
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 90 VEEHRVV 70
>gb|BJ451335.1|BJ451335 BJ451335 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33j18 5', mRNA sequence
Length = 555
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 142 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 321
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 322 SSQQIFTRATNT*FTSCV 375
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 389 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 210
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 209 LYLGTSVSSLS*VAWSKSTALFT 141
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 94 RRRTWPAWT 68
>gb|BJ458832.1|BJ458832 BJ458832 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33j18 3', mRNA sequence
Length = 530
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 388 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 209
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 208 SSQQIFTRATNT*FTSCV 155
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 141 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 320
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 321 LYLGTSVSSLS*VAWSKSTALFT 389
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 436 RRRTWPAWT 462
>gb|BQ468369.1|BQ468369 HM01B04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01B04
5-PRIME, mRNA sequence
Length = 580
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 166 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 345
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 346 SSQQIFTRATNT*FTSCV 399
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 413 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 234
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 233 LYLGTSVSSLS*VAWSKSTALFT 165
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 369 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 190
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 189 VEEHRVV 169
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 118 RRRTWPAWT 92
>gb|BQ656643.1|BQ656643 HA02L05u HA Hordeum vulgare subsp. vulgare cDNA clone HA02L05
3-PRIME, mRNA sequence
Length = 414
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 391 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 212
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 211 SSQQIFTRATNT*FTSCV 158
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 144 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 323
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 324 LYLGTSVSSLS*VAWSKSTALFT 392
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 188 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 367
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 368 VEEHRVV 388
>gb|BQ662407.1|BQ662407 HS02D19u HS Hordeum vulgare subsp. vulgare cDNA clone HS02D19
3-PRIME, mRNA sequence
Length = 417
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 354 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 175
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 174 SSQQIFTRATNT*FTSCV 121
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 107 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 286
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 287 LYLGTSVSSLS*VAWSKSTALFT 355
Score = 101 bits (216), Expect = 3e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 151 PGENLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 330
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 331 VEEHRVV 351
>gb|BQ767317.1|BQ767317 EBro08_SQ008_F17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_F17 5', mRNA sequence
Length = 568
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 170 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 349
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 350 SSQQIFTRATNT*FTSCV 403
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 417 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 238
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 237 LYLGTSVSSLS*VAWSKSTALFT 169
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 373 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 194
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 193 VEEHRVV 173
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 122 RRRTWPAWT 96
>gb|BQ767711.1|BQ767711 EBro08_SQ009_K17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_K17 5', mRNA sequence
Length = 584
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 361
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 362 SSQQIFTRATNT*FTSCV 415
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 429 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 250
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 249 LYLGTSVSSLS*VAWSKSTALFT 181
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 385 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 206
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 205 VEEHRVV 185
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 134 RRRTWPAWT 108
>gb|BU974760.1|BU974760 HB29A08r BC Hordeum vulgare subsp. vulgare cDNA clone HB29A08
5-PRIME, mRNA sequence
Length = 431
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 44 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 223
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 224 SSQQIFTRATNT*FTSCV 277
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 291 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 112
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 111 LYLGTSVSSLS*VAWSKSTALFT 43
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 247 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 68
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 67 VEEHRVV 47
>gb|BU977257.1|BU977257 HA11C05r HA Hordeum vulgare subsp. vulgare cDNA clone HA11C05
5-PRIME, mRNA sequence
Length = 568
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 181 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 360
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 361 SSQQIFTRATNT*FTSCV 414
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 428 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 249
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 248 LYLGTSVSSLS*VAWSKSTALFT 180
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 384 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 205
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 204 VEEHRVV 184
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 133 RRRTWPAWT 107
>gb|BU977258.1|BU977258 HA11C05u HA Hordeum vulgare subsp. vulgare cDNA clone HA11C05
3-PRIME, mRNA sequence
Length = 568
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 388 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 209
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 208 SSQQIFTRATNT*FTSCV 155
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 141 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 320
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 321 LYLGTSVSSLS*VAWSKSTALFT 389
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 185 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 364
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 365 VEEHRVV 385
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 436 RRRTWPAWT 462
>gb|BU981119.1|BU981119 HA22L04r HA Hordeum vulgare subsp. vulgare cDNA clone HA22L04
5-PRIME, mRNA sequence
Length = 451
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 50 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 229
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 230 SSQQIFTRATNT*FTSCV 283
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 297 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 118
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 117 LYLGTSVSSLS*VAWSKSTALFT 49
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 253 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 74
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 73 VEEHRVV 53
>gb|BU982009.1|BU982009 HA25E05r HA Hordeum vulgare subsp. vulgare cDNA clone HA25E05
5-PRIME, mRNA sequence
Length = 442
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 52 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 231
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 232 SSQQIFTRATNT*FTSCV 285
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 299 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 120
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 119 LYLGTSVSSLS*VAWSKSTALFT 51
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 255 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 76
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 75 VEEHRVV 55
>gb|BU999552.1|BU999552 HI14N17r HI Hordeum vulgare subsp. vulgare cDNA clone HI14N17
5-PRIME, mRNA sequence
Length = 571
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 181 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 360
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 361 SSQQIFTRATNT*FTSCV 414
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 428 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 249
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 248 LYLGTSVSSLS*VAWSKSTALFT 180
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 384 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 205
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 204 VEEHRVV 184
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 133 RRRTWPAWT 107
>gb|CA000928.1|CA000928 HS06I11u HS Hordeum vulgare subsp. vulgare cDNA clone HS06I11
3-PRIME, mRNA sequence
Length = 433
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / -1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 388 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 209
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 208 SSQQIFTRATNT*FTSCV 155
Score = 105 bits (224), Expect = 3e-022
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / +3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 141 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 320
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 321 LYLGTSVSSLS*VAWSKSTALFT 389
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 185 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 364
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 365 VEEHRVV 385
>gb|CA032599.1|CA032599 HX13J18r HX Hordeum vulgare subsp. vulgare cDNA clone HX13J18
5-PRIME, mRNA sequence
Length = 631
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 181 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 360
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 361 SSQQIFTRATNT*FTSCV 414
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 428 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 249
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 248 LYLGTSVSSLS*VAWSKSTALFT 180
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -2
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 384 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 205
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 204 VEEHRVV 184
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 133 RRRTWPAWT 107
>gb|CV057924.1|CV057924 BNEL32d3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL32d3 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 547
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 146 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 325
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 326 SSQQIFTRATNT*FTSCV 379
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 393 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 214
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 213 LYLGTSVSSLS*VAWSKSTALFT 145
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 98 RRRTWPAWT 72
>gb|CK122306.1|CK122306 BES1824102n03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N032 5-PRIME, mRNA sequence
Length = 661
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 171 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 350
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 351 SSQQIFTRATNT*FTSCV 404
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 418 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 239
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 238 LYLGTSVSSLS*VAWSKSTALFT 170
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 374 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 195
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 194 VEEHRVV 174
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 123 RRRTWPAWT 97
>gb|CK124393.1|CK124393 BES1824108k21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K218 5-PRIME, mRNA sequence
Length = 611
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 154 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 333
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 334 SSQQIFTRATNT*FTSCV 387
Score = 105 bits (224), Expect(2) = 6e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 401 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 222
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 221 LYLGTSVSSLS*VAWSKSTALFT 153
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 357 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 178
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 177 VEEHRVV 157
Score = 24.9 bits (48), Expect(2) = 6e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -2
Query: 152 RTWPAWT 132
RTWPAWT
Sbjct: 100 RTWPAWT 80
>gb|CK125078.1|CK125078 BES1824106i18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I186 5-PRIME, mRNA sequence
Length = 575
Score = 159 bits (342), Expect = 1e-038
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 171 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIH 350
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 351 SSQQIFTRATNT*FTSCV 404
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 418 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 239
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 238 LYLGTSVSSLS*VAWSKSTALFT 170
Score = 101 bits (215), Expect = 5e-021
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2 / -1
Query: 409 PGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGL 230
PG LLA ++ HP EP HQ+LD P Q ++PE+L DGW DLLVLGHLGEQL+VGGL
Sbjct: 374 PGEDLLAGVD*HHPDEPPLHQVLDSPASQRPVDPESLGEDGWRDLLVLGHLGEQLVVGGL 195
Query: 229 IEEHSVV 209
+EEH VV
Sbjct: 194 VEEHRVV 174
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -3
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 123 RRRTWPAWT 97
>gb|BM376287.2|BM376287 EBma01_SQ002_O17_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_O17 5', mRNA sequence
Length = 514
Score = 158 bits (339), Expect(2) = 3e-038
Identities = 67/78 (85%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLI+MVS+H
Sbjct: 177 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIKMVSIH 356
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 357 SSQQIFTRATNT*FTSCV 410
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 424 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 245
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 244 LYLGTSVSSLS*VAWSKSTALFT 176
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 129 RRRTWPAWT 103
Score = 21.7 bits (41), Expect(2) = 3e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 77 EEGEGPGGVV 106
>gb|BM376767.2|BM376767 EBem05_SQ003_C21_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_C21 5', mRNA sequence
Length = 533
Score = 158 bits (339), Expect(2) = 3e-038
Identities = 67/78 (85%), Positives = 74/78 (94%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERLR+NGSLARRAIKDLM +GLI+MVS+H
Sbjct: 142 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIKMVSIH 321
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 322 SSQQIFTRATNT*FTSCV 375
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 389 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 210
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 209 LYLGTSVSSLS*VAWSKSTALFT 141
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 94 RRRTWPAWT 68
Score = 21.7 bits (41), Expect(2) = 3e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 42 EEGEGPGGVV 71
>gb|BM368233.2|BM368233 EBed01_SQ002_I21_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_I21 5', mRNA sequence
Length = 558
Score = 158 bits (339), Expect(2) = 4e-038
Identities = 67/78 (85%), Positives = 74/78 (94%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLL+EVPKYKQITPS+LSERL++NGSLARRAIKDLM +GLIRMVS+H
Sbjct: 165 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLKINGSLARRAIKDLMERGLIRMVSIH 344
Query: 386 SSQQIYTRATNT*GVFCV 439
SSQQI+TRATNT* CV
Sbjct: 345 SSQQIFTRATNT*FTSCV 398
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
+N + TQ V VALV ICWLE +TILMSP +IRSL+ALRA+DPL L RS+R DGVIC
Sbjct: 412 ENRQVTQEVNQVFVALVKICWLEWIDTILMSPLSIRSLIALRARDPLILSRSERTDGVIC 233
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STAL T
Sbjct: 232 LYLGTSVSSLS*VAWSKSTALFT 164
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -1
Query: 158 RLRTWPAWT 132
R RTWPAWT
Sbjct: 117 RRRTWPAWT 91
Score = 21.7 bits (41), Expect(2) = 4e-038
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 106 EEGEGPAAIV 135
EEGEGP +V
Sbjct: 65 EEGEGPGGVV 94
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 214,127,978
Number of Sequences: 312970
Number of extensions: 2860467
Number of successful extensions: 23754
Number of sequences better than 1.0e-020: 180
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7889507874
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)