TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.11
(514 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM444840.1|BM444840 EBem09_SQ006_K06_R embryo, 1 Day ger... 114 4e-027
gb|BQ761328.1|BQ761328 EBro06_SQ001_C13_R root, 3 week, dro... 116 4e-027
gb|BM374273.1|BM374273 EBpi03_SQ003_C14_R pistil, 4 DPA, no... 114 7e-027
gb|BU971048.1|BU971048 HB16H10r BC Hordeum vulgare subsp. v... 116 7e-027
gb|BU980014.1|BU980014 HA18D12r HA Hordeum vulgare subsp. v... 116 7e-027
gb|BQ469228.1|BQ469228 HM03M12r HM Hordeum vulgare subsp. v... 116 7e-027
gb|BQ661493.1|BQ661493 HM03M12u HM Hordeum vulgare subsp. v... 116 7e-027
gb|BQ762654.1|BQ762654 EBro02_SQ004_J17_R root, 3 week, hyd... 116 8e-027
gb|CK124618.1|CK124618 BES1824109m16 BES1824 Hordeum vulgar... 116 8e-027
gb|CV054427.1|CV054427 BNEL10D4 Barley EST endosperm librar... 116 8e-027
gb|CV056203.1|CV056203 BNEL15B10 Barley EST endosperm libra... 116 8e-027
gb|CV057454.1|CV057454 BNEL28a3 Barley EST endosperm librar... 116 8e-027
gb|CV064248.1|CV064248 BNEL99g3 Barley EST endosperm librar... 116 8e-027
gb|CV056825.1|CV056825 BNEL21a2 Barley EST endosperm librar... 114 8e-027
gb|BI778125.2|BI778125 EBro07_SQ002_E19_R root, 3 week, red... 114 8e-027
gb|BU984850.1|BU984850 HF05D20r HF Hordeum vulgare subsp. v... 116 8e-027
gb|CV060632.1|CV060632 BNEL5D3 Barley EST endosperm library... 116 8e-027
gb|BE216876.3|BE216876 HV_CEb0011O14f Hordeum vulgare seedl... 114 8e-027
gb|CV060164.1|CV060164 BNEL55b3 Barley EST endosperm librar... 114 8e-027
gb|BQ768272.1|BQ768272 EBro08_SQ011_B09_R root, 3 week, dro... 116 8e-027
gb|CV056022.1|CV056022 BNEL13A8 Barley EST endosperm librar... 116 8e-027
gb|AJ434154.1|AJ434154 AJ434154 S00002 Hordeum vulgare subs... 116 8e-027
gb|BM368930.2|BM368930 EBem07_SQ002_A20_R embryo, 28 DPA, n... 116 8e-027
gb|BU968937.1|BU968937 HB10A17r BC Hordeum vulgare subsp. v... 116 8e-027
gb|BE196470.2|BE196470 HVSMEh0092G06f Hordeum vulgare 5-45 ... 116 1e-026
gb|BU981336.1|BU981336 HA23F17r HA Hordeum vulgare subsp. v... 116 1e-026
gb|AJ435242.1|AJ435242 AJ435242 S00002 Hordeum vulgare subs... 116 1e-026
gb|BU979440.1|BU979440 HA16C18r HA Hordeum vulgare subsp. v... 116 1e-026
gb|CD664027.1|CD664027 UCRHV18_07ca01_b1 Drought-stressed D... 112 4e-026
gb|BU977074.1|BU977074 HA10M22r HA Hordeum vulgare subsp. v... 116 6e-026
gb|BU977075.1|BU977075 HA10M22u HA Hordeum vulgare subsp. v... 116 6e-026
gb|BU979071.1|BU979071 HA15B07r HA Hordeum vulgare subsp. v... 116 6e-026
gb|BE420561.1|BE420561 HWM000.B10 ITEC HWM Barley Leaf Libr... 111 7e-026
gb|CB881731.1|CB881731 HM10L11w HM Hordeum vulgare subsp. v... 116 9e-026
gb|BG343883.1|BG343883 HVSMEg0007A05f Hordeum vulgare pre-a... 116 1e-025
gb|BF631453.3|BF631453 HVSMEb0015P24f Hordeum vulgare seedl... 116 1e-025
gb|BM376577.1|BM376577 EBem05_SQ002_J23_R embryo, 14 DPA, n... 116 1e-025
gb|BQ459891.1|BQ459891 HA07M10r HA Hordeum vulgare subsp. v... 116 1e-025
gb|BQ460530.1|BQ460530 HA09D20r HA Hordeum vulgare subsp. v... 116 1e-025
gb|BQ470479.1|BQ470479 HX03B19r HX Hordeum vulgare subsp. v... 116 1e-025
gb|BQ665347.1|BQ665347 HX03B19u HX Hordeum vulgare subsp. v... 116 1e-025
gb|BQ756841.1|BQ756841 EBem09_SQ003_O17_R embryo, 1 Day ger... 116 1e-025
gb|BQ766319.1|BQ766319 EBro08_SQ005_K15_R root, 3 week, dro... 116 1e-025
gb|BQ767674.1|BQ767674 EBro08_SQ009_E15_R root, 3 week, dro... 116 1e-025
gb|BI777489.3|BI777489 EBro04_SQ001_G02_R root, 3 week, sal... 116 1e-025
gb|BU967665.1|BU967665 HB05A10r BC Hordeum vulgare subsp. v... 116 1e-025
gb|BU967669.1|BU967669 HB05A17r BC Hordeum vulgare subsp. v... 116 1e-025
gb|BU979298.1|BU979298 HA15L11r HA Hordeum vulgare subsp. v... 116 1e-025
gb|CA021825.1|CA021825 HZ41D19r HZ Hordeum vulgare subsp. v... 116 1e-025
gb|CA029375.1|CA029375 HZ65A12r HZ Hordeum vulgare subsp. v... 116 1e-025
gb|CB878759.1|CB878759 HP09L10T HP Hordeum vulgare subsp. v... 116 1e-025
gb|CV059680.1|CV059680 BNEL4G4 Barley EST endosperm library... 116 1e-025
gb|AV833011.1|AV833011 AV833011 K. Sato unpublished cDNA li... 114 3e-025
gb|BE559303.2|BE559303 HV_CEb0023I09f Hordeum vulgare seedl... 114 3e-025
gb|BF259382.3|BF259382 HVSMEf0019H02f Hordeum vulgare seedl... 114 3e-025
gb|BF267552.3|BF267552 HV_CEa0018E04f Hordeum vulgare seedl... 114 3e-025
gb|AJ462582.1|AJ462582 AJ462582 S00002 Hordeum vulgare subs... 114 3e-025
gb|BJ473902.1|BJ473902 BJ473902 K. Sato unpublished cDNA li... 114 3e-025
gb|BQ464636.1|BQ464636 HF02N09r HF Hordeum vulgare subsp. v... 114 3e-025
gb|BM443906.2|BM443906 EBem09_SQ002_A02_R embryo, 1 Day ger... 114 3e-025
gb|BM374387.2|BM374387 EBpi03_SQ003_H18_R pistil, 4 DPA, no... 114 3e-025
gb|BQ761736.1|BQ761736 EBem10_SQ001_O16_R embryo, 2 Day ger... 114 3e-025
gb|BQ768892.1|BQ768892 EBro08_SQ012_P20_R root, 3 week, dro... 114 3e-025
gb|CB875971.1|CB875971 HX09O06w HX Hordeum vulgare subsp. v... 114 3e-025
gb|CV059378.1|CV059378 BNEL47e1 Barley EST endosperm librar... 113 8e-025
gb|BM444382.1|BM444382 EBem09_SQ004_P20_R embryo, 1 Day ger... 112 1e-024
gb|BE454718.2|BE454718 HVSMEh0095G16f Hordeum vulgare 5-45 ... 112 1e-024
gb|BQ761477.1|BQ761477 EBro07_SQ003_P09_R root, 3 week, red... 110 7e-024
gb|BM444021.2|BM444021 EBem09_SQ002_M14_R embryo, 1 Day ger... 109 1e-023
gb|BU986478.1|BU986478 HF11P18r HF Hordeum vulgare subsp. v... 108 3e-023
gb|BM443802.2|BM443802 EBem09_SQ001_I24_R embryo, 1 Day ger... 107 5e-023
gb|BU983093.1|BU983093 HA28I13r HA Hordeum vulgare subsp. v... 106 9e-023
gb|BQ761704.1|BQ761704 EBem10_SQ001_I14_R embryo, 2 Day ger... 104 3e-022
gb|BQ766173.1|BQ766173 EBro08_SQ005_B07_R root, 3 week, dro... 101 2e-021
>gb|BM444840.1|BM444840 EBem09_SQ006_K06_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_K06 5', mRNA sequence
Length = 223
Score = 114 bits (244), Expect(2) = 4e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 184 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 44
Score = 113 bits (242), Expect = 6e-025
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 45 EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 188
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 47 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 187
Score = 24.4 bits (47), Expect(2) = 4e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 197 VVLPRVPQVPQE 162
>gb|BQ761328.1|BQ761328 EBro06_SQ001_C13_R root, 3 week, drought-stressed, cv Optic, EBro06
Hordeum vulgare subsp. vulgare cDNA clone
EBro06_SQ001_C13 5', mRNA sequence
Length = 228
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 5 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 184
Query: 243 RYSR 254
RYSR
Sbjct: 185 RYSR 196
Score = 114 bits (244), Expect(2) = 4e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 192 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 52
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 7 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 186
Query: 245 VFK 253
V +
Sbjct: 187 VLE 195
Score = 24.4 bits (47), Expect(2) = 4e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 205 VVLPRVPQVPQE 170
>gb|BM374273.1|BM374273 EBpi03_SQ003_C14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_C14 5', mRNA sequence
Length = 370
Score = 114 bits (244), Expect(2) = 7e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 169 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 29
Score = 113 bits (242), Expect = 6e-025
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 30 EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 173
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 32 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 172
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 182 VVLPRVPQVPQE 147
>gb|BU971048.1|BU971048 HB16H10r BC Hordeum vulgare subsp. vulgare cDNA clone HB16H10
5-PRIME, mRNA sequence
Length = 381
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 17 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 196
Query: 243 RYSR 254
RYSR
Sbjct: 197 RYSR 208
Score = 114 bits (244), Expect(2) = 7e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 204 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 64
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 19 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 198
Query: 245 VFK 253
V +
Sbjct: 199 VLE 207
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 217 VVLPRVPQVPQE 182
>gb|BU980014.1|BU980014 HA18D12r HA Hordeum vulgare subsp. vulgare cDNA clone HA18D12
5-PRIME, mRNA sequence
Length = 396
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 5 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 184
Query: 243 RYSR 254
RYSR
Sbjct: 185 RYSR 196
Score = 114 bits (244), Expect(2) = 7e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 192 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 52
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 7 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 186
Query: 245 VFK 253
V +
Sbjct: 187 VLE 195
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 205 VVLPRVPQVPQE 170
>gb|BQ469228.1|BQ469228 HM03M12r HM Hordeum vulgare subsp. vulgare cDNA clone HM03M12
5-PRIME, mRNA sequence
Length = 408
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 17 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 196
Query: 243 RYSR 254
RYSR
Sbjct: 197 RYSR 208
Score = 114 bits (244), Expect(2) = 7e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 204 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 64
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 19 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 198
Query: 245 VFK 253
V +
Sbjct: 199 VLE 207
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 217 VVLPRVPQVPQE 182
>gb|BQ661493.1|BQ661493 HM03M12u HM Hordeum vulgare subsp. vulgare cDNA clone HM03M12
3-PRIME, mRNA sequence
Length = 408
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / -2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 392 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 213
Query: 243 RYSR 254
RYSR
Sbjct: 212 RYSR 201
Score = 114 bits (244), Expect(2) = 7e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / +1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 205 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 345
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / -1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 390 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 211
Query: 245 VFK 253
V +
Sbjct: 210 VLE 202
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 192 VGLPRVPQVPQE 227
>gb|BQ762654.1|BQ762654 EBro02_SQ004_J17_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_J17 5', mRNA sequence
Length = 411
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 11 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 190
Query: 243 RYSR 254
RYSR
Sbjct: 191 RYSR 202
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 198 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 58
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 13 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 192
Query: 245 VFK 253
V +
Sbjct: 193 VLE 201
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 211 VVLPRVPQVPQE 176
>gb|CK124618.1|CK124618 BES1824109m16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M169 5-PRIME, mRNA sequence
Length = 414
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 23 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 202
Query: 243 RYSR 254
RYSR
Sbjct: 203 RYSR 214
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 210 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 70
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 25 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 204
Query: 245 VFK 253
V +
Sbjct: 205 VLE 213
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 223 VVLPRVPQVPQE 188
>gb|CV054427.1|CV054427 BNEL10D4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10D4 5' similar to P0475H04.11,
mRNA sequence
Length = 417
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 8 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 187
Query: 243 RYSR 254
RYSR
Sbjct: 188 RYSR 199
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 195 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 55
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 10 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 189
Query: 245 VFK 253
V +
Sbjct: 190 VLE 198
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 208 VVLPRVPQVPQE 173
>gb|CV056203.1|CV056203 BNEL15B10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15B10 5' similar to P0475H04.11,
mRNA sequence
Length = 417
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 8 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 187
Query: 243 RYSR 254
RYSR
Sbjct: 188 RYSR 199
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 195 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 55
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 10 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 189
Query: 245 VFK 253
V +
Sbjct: 190 VLE 198
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 208 VVLPRVPQVPQE 173
>gb|CV057454.1|CV057454 BNEL28a3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL28a3 5' similar to P0475H04.11,
mRNA sequence
Length = 417
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 8 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 187
Query: 243 RYSR 254
RYSR
Sbjct: 188 RYSR 199
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 195 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 55
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 10 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 189
Query: 245 VFK 253
V +
Sbjct: 190 VLE 198
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 208 VVLPRVPQVPQE 173
>gb|CV064248.1|CV064248 BNEL99g3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL99g3 5' similar to P0475H04.11,
mRNA sequence
Length = 417
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 8 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 187
Query: 243 RYSR 254
RYSR
Sbjct: 188 RYSR 199
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 195 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 55
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 10 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 189
Query: 245 VFK 253
V +
Sbjct: 190 VLE 198
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 208 VVLPRVPQVPQE 173
>gb|CV056825.1|CV056825 BNEL21a2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL21a2 5' similar to P0475H04.11,
mRNA sequence
Length = 418
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 196 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 56
Score = 113 bits (242), Expect = 6e-025
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 57 EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 200
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 59 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 199
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 209 VVLPRVPQVPQE 174
>gb|BI778125.2|BI778125 EBro07_SQ002_E19_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_E19 5', mRNA sequence
Length = 421
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 184 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 44
Score = 113 bits (242), Expect = 6e-025
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 45 EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 188
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 47 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 187
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 197 VVLPRVPQVPQE 162
>gb|BU984850.1|BU984850 HF05D20r HF Hordeum vulgare subsp. vulgare cDNA clone HF05D20
5-PRIME, mRNA sequence
Length = 424
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 24 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 203
Query: 243 RYSR 254
RYSR
Sbjct: 204 RYSR 215
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 211 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 71
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 26 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 205
Query: 245 VFK 253
V +
Sbjct: 206 VLE 214
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 224 VVLPRVPQVPQE 189
>gb|CV060632.1|CV060632 BNEL5D3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5D3 5' similar to P0475H04.11, mRNA
sequence
Length = 426
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 2 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 181
Query: 243 RYSR 254
RYSR
Sbjct: 182 RYSR 193
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 189 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 49
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 4 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 183
Query: 245 VFK 253
V +
Sbjct: 184 VLE 192
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 202 VVLPRVPQVPQE 167
>gb|BE216876.3|BE216876 HV_CEb0011O14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011O14f, mRNA sequence
Length = 428
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 188 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 48
Score = 114 bits (243), Expect = 4e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 1 RRRRTPAQP*QQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 180
Query: 243 RYSR 254
RYSR
Sbjct: 181 RYSR 192
Score = 111 bits (236), Expect = 4e-024
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N + A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 3 PPPNPSATLAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 182
Query: 245 VFK 253
V +
Sbjct: 183 VLE 191
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 201 VVLPRVPQVPQE 166
>gb|CV060164.1|CV060164 BNEL55b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL55b3 5' similar to P0475H04.11,
mRNA sequence
Length = 428
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 185 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 45
Score = 113 bits (242), Expect = 6e-025
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3 / +1
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 46 EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 189
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +3
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 48 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 188
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 198 VVLPRVPQVPQE 163
>gb|BQ768272.1|BQ768272 EBro08_SQ011_B09_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_B09 5', mRNA sequence
Length = 434
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 10 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 189
Query: 243 RYSR 254
RYSR
Sbjct: 190 RYSR 201
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 197 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 57
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 12 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 191
Query: 245 VFK 253
V +
Sbjct: 192 VLE 200
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 210 VVLPRVPQVPQE 175
>gb|CV056022.1|CV056022 BNEL13A8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL13A8 5' similar to P0475H04.11,
mRNA sequence
Length = 440
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 10 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 189
Query: 243 RYSR 254
RYSR
Sbjct: 190 RYSR 201
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 197 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 57
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 12 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 191
Query: 245 VFK 253
V +
Sbjct: 192 VLE 200
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 210 VVLPRVPQVPQE 175
>gb|AJ434154.1|AJ434154 AJ434154 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200083D11F1, mRNA sequence
Length = 448
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 39 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 218
Query: 243 RYSR 254
RYSR
Sbjct: 219 RYSR 230
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 226 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 86
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 41 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 220
Query: 245 VFK 253
V +
Sbjct: 221 VLE 229
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 239 VVLPRVPQVPQE 204
>gb|BM368930.2|BM368930 EBem07_SQ002_A20_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_A20 5', mRNA sequence
Length = 458
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 10 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 189
Query: 243 RYSR 254
RYSR
Sbjct: 190 RYSR 201
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 197 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 57
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 12 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 191
Query: 245 VFK 253
V +
Sbjct: 192 VLE 200
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 210 VVLPRVPQVPQE 175
>gb|BU968937.1|BU968937 HB10A17r BC Hordeum vulgare subsp. vulgare cDNA clone HB10A17
5-PRIME, mRNA sequence
Length = 460
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 21 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 200
Query: 243 RYSR 254
RYSR
Sbjct: 201 RYSR 212
Score = 114 bits (244), Expect(2) = 8e-027
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 208 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 68
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 23 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 202
Query: 245 VFK 253
V +
Sbjct: 203 VLE 211
Score = 24.4 bits (47), Expect(2) = 8e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 221 VVLPRVPQVPQE 186
>gb|BE196470.2|BE196470 HVSMEh0092G06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092G06f, mRNA sequence
Length = 920
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 7 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 186
Query: 243 RYSR 254
RYSR
Sbjct: 187 RYSR 198
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 194 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 54
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 9 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 188
Query: 245 VFK 253
V +
Sbjct: 189 VLE 197
Score = 24.4 bits (47), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 207 VVLPRVPQVPQE 172
>gb|BU981336.1|BU981336 HA23F17r HA Hordeum vulgare subsp. vulgare cDNA clone HA23F17
5-PRIME, mRNA sequence
Length = 515
Score = 116 bits (249), Expect = 6e-026
Identities = 49/69 (71%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 48 HKNPKRRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPK 227
H+ RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPK
Sbjct: 4 HEAVFRRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPK 183
Query: 228 FLRNLRYSR 254
FLRNLRYSR
Sbjct: 184 FLRNLRYSR 210
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 206 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 66
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 21 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 200
Query: 245 VFK 253
V +
Sbjct: 201 VLE 209
Score = 24.4 bits (47), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 219 VVLPRVPQVPQE 184
>gb|AJ435242.1|AJ435242 AJ435242 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200051H12F1, mRNA sequence
Length = 517
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 18 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 197
Query: 243 RYSR 254
RYSR
Sbjct: 198 RYSR 209
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 205 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 65
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 20 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 199
Query: 245 VFK 253
V +
Sbjct: 200 VLE 208
Score = 24.4 bits (47), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 218 VVLPRVPQVPQE 183
>gb|BU979440.1|BU979440 HA16C18r HA Hordeum vulgare subsp. vulgare cDNA clone HA16C18
5-PRIME, mRNA sequence
Length = 505
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 24 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 203
Query: 243 RYSR 254
RYSR
Sbjct: 204 RYSR 215
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 211 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 71
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 26 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 205
Query: 245 VFK 253
V +
Sbjct: 206 VLE 214
Score = 24.4 bits (47), Expect(2) = 1e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 224 VVLPRVPQVPQE 189
>gb|CD664027.1|CD664027 UCRHV18_07ca01_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_07ca01, mRNA sequence
Length = 543
Score = 112 bits (240), Expect(2) = 4e-026
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -1 / +1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAISS 107
EYLRFLRN GSIPLVE RWRLGFLMPFLCALY+WLCAVWFFDLAIS+
Sbjct: 394 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYNWLCAVWFFDLAISA 537
Score = 111 bits (236), Expect = 4e-024
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3 / -2
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAKSKNHTAHNQ YKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 533 EMAKSKNHTAHNQLYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 390
Score = 106 bits (227), Expect = 7e-023
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +2 / -1
Query: 107 GRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
G DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 537 GGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 391
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 381 VVLPRVPQVPQE 416
>gb|BU977074.1|BU977074 HA10M22r HA Hordeum vulgare subsp. vulgare cDNA clone HA10M22
5-PRIME, mRNA sequence
Length = 442
Score = 116 bits (249), Expect = 6e-026
Identities = 49/69 (71%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 48 HKNPKRRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPK 227
H+ RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPK
Sbjct: 4 HEAVFRRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPK 183
Query: 228 FLRNLRYSR 254
FLRNLRYSR
Sbjct: 184 FLRNLRYSR 210
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 206 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 66
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 21 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 200
Query: 245 VFK 253
V +
Sbjct: 201 VLE 209
>gb|BU977075.1|BU977075 HA10M22u HA Hordeum vulgare subsp. vulgare cDNA clone HA10M22
3-PRIME, mRNA sequence
Length = 442
Score = 116 bits (249), Expect = 6e-026
Identities = 49/69 (71%), Positives = 52/69 (75%)
Frame = +3 / -1
Query: 48 HKNPKRRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPK 227
H+ RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPK
Sbjct: 439 HEAVFRRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPK 260
Query: 228 FLRNLRYSR 254
FLRNLRYSR
Sbjct: 259 FLRNLRYSR 233
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / +3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 237 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 377
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / -3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 422 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 243
Query: 245 VFK 253
V +
Sbjct: 242 VLE 234
>gb|BU979071.1|BU979071 HA15B07r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B07
5-PRIME, mRNA sequence
Length = 442
Score = 116 bits (249), Expect = 6e-026
Identities = 49/69 (71%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 48 HKNPKRRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPK 227
H+ RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPK
Sbjct: 4 HEAVFRRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPK 183
Query: 228 FLRNLRYSR 254
FLRNLRYSR
Sbjct: 184 FLRNLRYSR 210
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 206 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 66
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 21 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 200
Query: 245 VFK 253
V +
Sbjct: 201 VLE 209
>gb|BE420561.1|BE420561 HWM000.B10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM000.B10, mRNA sequence
Length = 1064
Score = 111 bits (238), Expect(2) = 7e-026
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAISS 107
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFF LAIS+
Sbjct: 269 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFHLAISA 126
Score = 110 bits (235), Expect = 5e-024
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3 / +1
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
EMAK KNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 130 EMAKWKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 273
Score = 107 bits (228), Expect = 5e-023
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2 / +3
Query: 101 GSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
G+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 120 GTSGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 272
Score = 24.4 bits (47), Expect(2) = 7e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 263 VALP*IPQVPQE 228
V LP +PQVPQE
Sbjct: 282 VVLPRVPQVPQE 247
>gb|CB881731.1|CB881731 HM10L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM10L11
3-PRIME, mRNA sequence
Length = 646
Score = 116 bits (248), Expect = 9e-026
Identities = 44/55 (80%), Positives = 46/55 (83%)
Frame = -1 / +3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAISSGSRSEDR 86
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLA+ G + R
Sbjct: 237 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLALQPGGSTSSR 401
Score = 109 bits (232), Expect = 1e-023
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +3 / -1
Query: 117 AKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
AKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 370 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 233
Score = 104 bits (221), Expect = 5e-022
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / -3
Query: 107 GRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
G GQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 380 GLQGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 234
>gb|BG343883.1|BG343883 HVSMEg0007A05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007A05f, mRNA sequence
Length = 818
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 11 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 190
Query: 243 RYSR 254
RYSR
Sbjct: 191 RYSR 202
Score = 114 bits (244), Expect(2) = 2e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 198 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 58
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 13 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 192
Query: 245 VFK 253
V +
Sbjct: 193 VLE 201
Score = 21.7 bits (41), Expect(2) = 2e-025
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2 / -3
Query: 309 HNHAFLPTPQPHH 271
H H LP P P H
Sbjct: 771 HLHTTLPRPTPSH 733
>gb|BF631453.3|BF631453 HVSMEb0015P24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015P24f, mRNA sequence
Length = 432
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 9 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 188
Query: 243 RYSR 254
RYSR
Sbjct: 189 RYSR 200
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 196 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 56
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 11 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 190
Query: 245 VFK 253
V +
Sbjct: 191 VLE 199
>gb|BM376577.1|BM376577 EBem05_SQ002_J23_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_J23 5', mRNA sequence
Length = 400
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 8 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 187
Query: 243 RYSR 254
RYSR
Sbjct: 188 RYSR 199
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 195 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 55
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 10 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 189
Query: 245 VFK 253
V +
Sbjct: 190 VLE 198
>gb|BQ459891.1|BQ459891 HA07M10r HA Hordeum vulgare subsp. vulgare cDNA clone HA07M10
5-PRIME, mRNA sequence
Length = 480
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / -1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 387 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 208
Query: 243 RYSR 254
RYSR
Sbjct: 207 RYSR 196
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / +2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 200 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 340
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / -3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 385 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 206
Query: 245 VFK 253
V +
Sbjct: 205 VLE 197
>gb|BQ460530.1|BQ460530 HA09D20r HA Hordeum vulgare subsp. vulgare cDNA clone HA09D20
5-PRIME, mRNA sequence
Length = 442
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / -2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 387 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 208
Query: 243 RYSR 254
RYSR
Sbjct: 207 RYSR 196
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / +2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 200 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 340
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / -1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 385 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 206
Query: 245 VFK 253
V +
Sbjct: 205 VLE 197
>gb|BQ470479.1|BQ470479 HX03B19r HX Hordeum vulgare subsp. vulgare cDNA clone HX03B19
5-PRIME, mRNA sequence
Length = 407
Score = 116 bits (247), Expect = 1e-025
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAISSGSRS 95
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS R+
Sbjct: 157 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAISDPPRA 2
Score = 114 bits (244), Expect = 3e-025
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / +3
Query: 99 RDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
R EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 6 RGGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 161
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 20 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 160
>gb|BQ665347.1|BQ665347 HX03B19u HX Hordeum vulgare subsp. vulgare cDNA clone HX03B19
3-PRIME, mRNA sequence
Length = 543
Score = 116 bits (247), Expect = 1e-025
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = -1 / +3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAISSGSRS 95
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS R+
Sbjct: 387 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAISDPPRA 542
Score = 114 bits (244), Expect = 3e-025
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +3 / -3
Query: 99 RDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
R EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNLRYSR
Sbjct: 538 RGGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSR 383
Score = 105 bits (223), Expect = 2e-022
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / -2
Query: 113 DGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPEVFK 253
DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPEV +
Sbjct: 524 DGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPEVLE 384
>gb|BQ756841.1|BQ756841 EBem09_SQ003_O17_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_O17 5', mRNA sequence
Length = 404
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 2 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 181
Query: 243 RYSR 254
RYSR
Sbjct: 182 RYSR 193
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 189 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 49
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 4 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 183
Query: 245 VFK 253
V +
Sbjct: 184 VLE 192
>gb|BQ766319.1|BQ766319 EBro08_SQ005_K15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_K15 5', mRNA sequence
Length = 399
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 7 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 186
Query: 243 RYSR 254
RYSR
Sbjct: 187 RYSR 198
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 194 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 54
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 9 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 188
Query: 245 VFK 253
V +
Sbjct: 189 VLE 197
>gb|BQ767674.1|BQ767674 EBro08_SQ009_E15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_E15 5', mRNA sequence
Length = 426
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 9 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 188
Query: 243 RYSR 254
RYSR
Sbjct: 189 RYSR 200
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 196 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 56
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 11 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 190
Query: 245 VFK 253
V +
Sbjct: 191 VLE 199
>gb|BI777489.3|BI777489 EBro04_SQ001_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_G02 5', mRNA sequence
Length = 239
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 14 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 193
Query: 243 RYSR 254
RYSR
Sbjct: 194 RYSR 205
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 201 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 61
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 16 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 195
Query: 245 VFK 253
V +
Sbjct: 196 VLE 204
>gb|BU967665.1|BU967665 HB05A10r BC Hordeum vulgare subsp. vulgare cDNA clone HB05A10
5-PRIME, mRNA sequence
Length = 461
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 41 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 220
Query: 243 RYSR 254
RYSR
Sbjct: 221 RYSR 232
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 228 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 88
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 43 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 222
Query: 245 VFK 253
V +
Sbjct: 223 VLE 231
>gb|BU967669.1|BU967669 HB05A17r BC Hordeum vulgare subsp. vulgare cDNA clone HB05A17
5-PRIME, mRNA sequence
Length = 464
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 41 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 220
Query: 243 RYSR 254
RYSR
Sbjct: 221 RYSR 232
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -3
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 228 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 88
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 43 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 222
Query: 245 VFK 253
V +
Sbjct: 223 VLE 231
>gb|BU979298.1|BU979298 HA15L11r HA Hordeum vulgare subsp. vulgare cDNA clone HA15L11
5-PRIME, mRNA sequence
Length = 425
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +3
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 21 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 200
Query: 243 RYSR 254
RYSR
Sbjct: 201 RYSR 212
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 208 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 68
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +2
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 23 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 202
Query: 245 VFK 253
V +
Sbjct: 203 VLE 211
>gb|CA021825.1|CA021825 HZ41D19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41D19
5-PRIME, mRNA sequence
Length = 424
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 17 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 196
Query: 243 RYSR 254
RYSR
Sbjct: 197 RYSR 208
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 204 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 64
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +1
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 19 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 198
Query: 245 VFK 253
V +
Sbjct: 199 VLE 207
>gb|CA029375.1|CA029375 HZ65A12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65A12
5-PRIME, mRNA sequence
Length = 429
Score = 116 bits (247), Expect = 1e-025
Identities = 48/64 (75%), Positives = 50/64 (78%)
Frame = +3 / +1
Query: 63 RRRTIRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNL 242
RRR + EMAKSKNHTAHNQSYKAH+NGIKKPKR RQ STKGMDPKFLRNL
Sbjct: 25 RRRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNL 204
Query: 243 RYSR 254
RYSR
Sbjct: 205 RYSR 216
Score = 114 bits (244), Expect = 3e-025
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -1 / -2
Query: 250 EYLRFLRNLGSIPLVEVCRWRLGFLMPFLCALYDWLCAVWFFDLAIS 110
EYLRFLRN GSIPLVE RWRLGFLMPFLCALYDWLCAVWFFDLAIS
Sbjct: 212 EYLRFLRNFGSIPLVEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS 72
Score = 108 bits (230), Expect = 3e-023
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +2 / +3
Query: 65 PPDNSLLAILASGSGRDGQVEEPHGAQPVVQGAQERHQEAQAPPADLHQGDGPQVPEEPE 244
PP N A+ DGQVEEPHGAQPVVQGAQERHQEAQAP LHQGDGP+VPEEPE
Sbjct: 27 PPPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDGPEVPEEPE 206
Query: 245 VFK 253
V +
Sbjct: 207 VLE 215
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 233,362,405
Number of Sequences: 312970
Number of extensions: 3421029
Number of successful extensions: 107211
Number of sequences better than 1.0e-020: 84
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5127561480
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)