TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.723
(715 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 377 e-104
gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. v... 339 e-101
gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. v... 356 9e-098
gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA li... 275 1e-095
gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-a... 221 4e-093
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 330 4e-090
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 273 9e-073
gb|BU970597.1|BU970597 HB15B24r BC Hordeum vulgare subsp. v... 214 2e-071
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 257 6e-068
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 254 3e-067
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 226 1e-058
gb|BE194563.1|BE194563 HVSMEh0086A12f Hordeum vulgare 5-45 ... 95 3e-051
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 114 3e-048
gb|BU971696.1|BU971696 HB19G05r BC Hordeum vulgare subsp. v... 112 7e-047
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 178 2e-044
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 178 2e-044
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 175 3e-043
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 174 5e-043
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 114 7e-043
gb|BU998822.1|BU998822 HI12E07r HI Hordeum vulgare subsp. v... 133 7e-040
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 105 8e-039
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 113 4e-038
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 153 9e-037
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 116 3e-036
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 151 4e-036
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 111 5e-036
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 148 3e-035
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 141 3e-033
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 141 5e-033
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 141 5e-033
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 141 5e-033
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 106 2e-032
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 135 3e-031
gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedl... 79 5e-031
gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa... 79 3e-027
gb|BQ464032.1|BQ464032 HF01C16T HF Hordeum vulgare subsp. v... 95 5e-027
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 113 2e-026
gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 ... 81 3e-025
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 112 2e-024
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 112 2e-024
gb|BU986804.1|BU986804 HF12P08r HF Hordeum vulgare subsp. v... 91 2e-024
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 109 2e-023
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 107 5e-023
gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. v... 68 4e-022
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 67 2e-021
gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA li... 97 8e-020
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 97 1e-019
gb|AV916500.1|AV916500 AV916500 K. Sato unpublished cDNA li... 95 4e-019
gb|BU978254.1|BU978254 HA12N07r HA Hordeum vulgare subsp. v... 62 3e-017
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 86 2e-016
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 84 6e-016
gb|BG414215.1|BG414215 HVSMEk0001E02f Hordeum vulgare testa... 62 1e-015
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 83 2e-015
gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. v... 58 6e-015
gb|BU984351.1|BU984351 HF03L02r HF Hordeum vulgare subsp. v... 80 1e-014
emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragme... 42 1e-011
gb|BG418771.1|BG418771 HVSMEk0024G02f Hordeum vulgare testa... 65 5e-010
gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA li... 64 1e-009
gb|BG366122.2|BG366122 HVSMEi0005O01f Hordeum vulgare 20 DA... 63 2e-009
gb|BQ663779.1|BQ663779 HU04A08u HU Hordeum vulgare subsp. v... 59 2e-008
gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. v... 59 2e-008
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 46 3e-008
gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. v... 58 4e-008
gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. v... 55 4e-007
gb|BG417650.1|BG417650 HVSMEk0019A03f Hordeum vulgare testa... 55 5e-007
gb|CA008089.1|CA008089 HU09N22r HU Hordeum vulgare subsp. v... 55 5e-007
gb|BF256707.2|BF256707 HVSMEf0010M08f Hordeum vulgare seedl... 49 2e-005
gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. v... 48 6e-005
gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. v... 39 2e-004
gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. v... 42 0.004
gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA li... 38 0.051
gb|BI953007.1|BI953007 HVSMEm0009C19f Hordeum vulgare green... 35 0.34
gb|BI957951.1|BI957951 HVSMEn0012H11f Hordeum vulgare rachi... 35 0.47
gb|BU970966.1|BU970966 HB16D11r BC Hordeum vulgare subsp. v... 35 0.47
gb|BM376235.2|BM376235 EBma01_SQ002_L24_R maternal, 4 DPA, ... 35 0.64
gb|BQ768611.1|BQ768611 EBro08_SQ012_N05_R root, 3 week, dro... 27 0.87
gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membra... 34 0.88
gb|BE193203.1|BE193203 HVSMEh0080C01f Hordeum vulgare 5-45 ... 33 1.7
gb|BE216742.2|BE216742 HV_CEb0011G20f Hordeum vulgare seedl... 31 8.1
gb|BE559431.2|BE559431 HV_CEb0024K14f Hordeum vulgare seedl... 31 8.1
gb|BF254430.3|BF254430 HVSMEf0004A01f Hordeum vulgare seedl... 31 8.1
emb|AJ234607.1|HVU234607 Hordeum vulgare genomic DNA fragme... 31 8.1
gb|BG369425.2|BG369425 HVSMEi0024F16f Hordeum vulgare 20 DA... 26 8.5
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 377 bits (818), Expect = e-104
Identities = 150/172 (87%), Positives = 164/172 (95%)
Frame = +2 / +2
Query: 200 ISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVS 379
IS+YRA+VHTQS + EMM+SLFKPRGT+DDGLIRESLIDFYTSSGKRKP+H+IIFRDGVS
Sbjct: 5 ISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDFYTSSGKRKPDHVIIFRDGVS 184
Query: 380 ESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDS 559
SQFTQVINIEL+QIIEACK LD+KW PKFTVIVAQKNHHT+FFQT SP+NV PGTVVD
Sbjct: 185 *SQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDK 364
Query: 560 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+VCHPKNFDFYMCAHAGMIGT+RPTHYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 365 QVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVY 520
Score = 257 bits (555), Expect = 6e-068
Identities = 124/172 (72%), Positives = 131/172 (76%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 519 YT*ESECTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 340
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHASMI SSSM +TWVN L LTPSLK+I
Sbjct: 339 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMICSSSMFITWVNWL*LTPSLKMI 160
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEI 199
SGFRFPELV*K RGLNNE IIS L D VCT ALYLE+
Sbjct: 159 TWSGFRFPELV*KSISDSRMRPSSSVPRGLNNEAIISCLGD*VCTVALYLEM 4
Score = 217 bits (468), Expect = 6e-056
Identities = 97/172 (56%), Positives = 124/172 (72%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 520 VHIRKRVHKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 341
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI W L++ GV+VLLSNN ELG PL+++ L CLDDL++LNV LGKL DSIPE++
Sbjct: 340 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLNVYHLGKLALADSIPEDD 161
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRD 200
V W L R SVEV++*F +EAII S+P KQ GHH G L VH CS+ RD
Sbjct: 160 NVVWLPLPRTSVEVNK*FANEAIIFSSPWFKQ*GHHLLFG*LSVHCCSVFRD 5
Score = 204 bits (440), Expect = 4e-052
Identities = 95/172 (55%), Positives = 113/172 (65%)
Frame = +1 / +1
Query: 199 YL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ 378
+L*I S SAH + QT +D L+V* G * *WPH IT LLH* W+A+ R + QGWSQ
Sbjct: 4 HL*IQSNSAHSVTQTGDDGLIV*TTGN*R*WPHSRITY*LLH*FWEAEARPRYHLQGWSQ 183
Query: 379 *KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG* 558
K VYPG +H*A +DHRGM V +V QVH CCS+EP HQ+ D R+CSSW GG*
Sbjct: 184 LKPVYPGDKH*A*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG* 363
Query: 559 *SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
S+PS EL LLHVC CWDDW+ +A+ L CSA D R GVC+ A L V
Sbjct: 364 TSVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCALAFLCV 519
Score = 187 bits (403), Expect = 5e-047
Identities = 95/171 (55%), Positives = 108/171 (63%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 518 THKKASAQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 339
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*L 354
H L S + WC GS EQQ *TW T T MPR*S AQC PG*T F *LHP*+*
Sbjct: 338 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQAQCLSPG*TGFS*LHP*R** 159
Query: 353 CVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R 201
L A Q+*CRS+ VI *GHH Q+P *T R S VW CAL+L I*R
Sbjct: 158 RGLASASQN*CRSQ*VIRE*GHHLQFPVV*TMRPSSPVWVTECALLLCI*R 6
Score = 162 bits (348), Expect = 2e-039
Identities = 85/171 (49%), Positives = 96/171 (56%)
Frame = +3 / +3
Query: 201 SLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESENQNT*LFSGMESV 380
SL+ E QCT + P+ +* P CL+ G L MMAS NH TSTL L S +Q T SGMES
Sbjct: 6 SLNTEQQCTLSHPNRR*WPHCLNHGELKMMASFANHLLTSTLVLGSGSQTTLSSSGMESA 185
Query: 381 KVSLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFLELWWIV 560
K SLPR TLS RSSRH S SG P R+ Q MF L WWI
Sbjct: 186 KASLPR**TLSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWIN 365
Query: 561 KFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
K AI RT TSTCV MLG*L ++G MFC R S +T RSL R+L C
Sbjct: 366 KCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLCTRFLMC 518
>gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. vulgare cDNA clone HF13F11
5-PRIME, mRNA sequence
Length = 664
Score = 339 bits (734), Expect(2) = e-101
Identities = 135/157 (85%), Positives = 149/157 (94%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
DRPS+AAVVSSR+WPLIS+YRA+VHTQS + EMM+SLFKPRGT+DDGLIRESLIDFYTSS
Sbjct: 193 DRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDFYTSS 372
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
GKRKP+ +IIFRDGVSESQFTQVINIEL+QIIEACK LD+KW PKFTVIVAQKNHHT+FF
Sbjct: 373 GKRKPDQVIIFRDGVSESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFF 552
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGT 622
QT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT
Sbjct: 553 QTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGT 663
Score = 249 bits (539), Expect(2) = 1e-080
Identities = 116/157 (73%), Positives = 122/157 (77%)
Frame = -2 / -3
Query: 621 VPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSR 442
VPIIPACAHM*KSKFLGW T LSTTVPG T SG+ V KNLV WFF*AT+TVNLG H SSR
Sbjct: 662 VPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSHLSSR 483
Query: 441 NLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPELV*KXXXXXXXXXXXXXXRGLN 262
+LHASMI SSSM +TWVN LSLTPSLK+I SGFRFPELV*K RGLN
Sbjct: 482 HLHASMICSSSMFITWVNWLSLTPSLKMITWSGFRFPELV*KSISDSRMRPSSSVPRGLN 303
Query: 261 NEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
NE IIS L D VCT ALYLE+RGH RELTTAA EGLS
Sbjct: 302 NEAIISCLGD*VCTVALYLEMRGHSRELTTAAMEGLS 192
Score = 214 bits (462), Expect(2) = 1e-063
Identities = 92/156 (58%), Positives = 117/156 (75%)
Frame = -1 / -2
Query: 619 SNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVVVLLSNNHSELG*PLLIQK 440
+NHPSM THVEV+VL MA+ IHH +R+NI W L++ GV+VLLSNN ELG PL+++
Sbjct: 660 ANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPLVVKA 481
Query: 439 LTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQ 260
L CLDDL++L+V LGKL F DSIPE++ + W L R SVEV++*FP+EAII S+P KQ
Sbjct: 480 LACLDDLLKLDVYHLGKLAFADSIPEDDNLVWLPLPRTSVEVNK*FPNEAIIFSSPWFKQ 301
Query: 259 RGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
GHH G L VH CS+ RD+RPLTRT+HR N R +
Sbjct: 300 *GHHLLFG*LSVHCCSVFRDERPLTRTHHRSNGRPV 193
Score = 190 bits (409), Expect(2) = 3e-070
Identities = 84/144 (58%), Positives = 100/144 (69%)
Frame = +1 / +3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
+AS+L*I S SAH + QT +D L+V* G * *WPH GIT LLH* W+A+ R + QG
Sbjct: 231 VASHL*IQSNSAHSVTQTGDDGLIV*TTGN*R*WPHSGITY*LLH*FWEAEARPGYHLQG 410
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
WSQ K VYPG +H A +DHRGM V +V QVH CCS+EP HQ+ D R+CSSW
Sbjct: 411 WSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYG 590
Query: 550 GG**SLPS*ELRLLHVCTCWDDWN 621
GG* S+PS EL LLHVC CWDDW+
Sbjct: 591 GG*TSVPSQEL*LLHVCACWDDWH 662
Score = 184 bits (397), Expect = 4e-046
Identities = 92/153 (60%), Positives = 101/153 (66%)
Frame = -3 / -1
Query: 617 QSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPET 438
QSSQH HTCRS+SS DG L YPP +QEEH L S + WC GS EQQ *TW T T
Sbjct: 658 QSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGT 479
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP*K*LCVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TT 258
MPR*S A+C PG*T F *LHP*+* L A Q+*CRS+ VIP *GHH Q+P *T
Sbjct: 478 CMPR*SAQARCLSPG*TGFR*LHP*R**PGLASASQN*CRSQ*VIPE*GHHLQFPVV*TM 299
Query: 257 RTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPK 159
R S VW CAL+L I*R*EA EN PP Q K
Sbjct: 298 RPSSPVWVTECALLLCI*R*EATHENSPPQQWK 200
Score = 149 bits (321), Expect(2) = 4e-040
Identities = 80/153 (52%), Positives = 88/153 (57%)
Frame = +3 / +2
Query: 159 LRLQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALES 338
L L RW VLV+GL SL+ E QCT + P+ +* P CL+ G L MMAS GNH TSTL L S
Sbjct: 200 LPLLRW*VLVSGLSSLNTEQQCTLSHPNRR*WPHCLNHGELKMMASFGNHLLTSTLVLGS 379
Query: 339 ENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRR 518
+Q SGMES K SLPR T S RSSRH S SG P R+
Sbjct: 380 GSQTRLSSSGMESAKASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQ 559
Query: 519 HHQTMFFLELWWIVKFAILRTSTSTCVHMLG*L 617
Q MF L WWI K AI RT TSTCV MLG*L
Sbjct: 560 IRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*L 658
Score = 95.5 bits (202), Expect(2) = 3e-070
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLN+LLQ+EA+ +IP V +VPTIILGMDVSHG PGQ A V
Sbjct: 40 YLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVSHGQPGQSDRPSIAAVV 219
Query: 182 S 184
S
Sbjct: 220 S 222
Score = 70.7 bits (148), Expect(2) = 1e-080
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / -3
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG*PC+TS+P+M+VGT T GI AS SN RPPS A I SKL +Y
Sbjct: 188 CPG*PCDTSMPRMIVGTFPTMGIARAASI*SNVLRPPSLAFILSSKLLKY 39
Score = 50.1 bits (103), Expect(2) = e-101
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1 / +3
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
*FA +D+C AWW + +A++ S NT C ++H +GC TW
Sbjct: 48 *FATQDKC*AWWPQHIASNRSSPCNTHCGEGAYYHPGHGCVTW 176
Score = 48.7 bits (100), Expect(2) = 1e-063
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -2
Query: 142 MTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
+TM*+IH DD +L H Y CF+L+Q V+ TKL I L QI QV
Sbjct: 180 LTM*HIHAQDDSRHLPHNGYCTGCFDLKQCVEATKLSIYLE*QITQV 40
Score = 35.0 bits (70), Expect(2) = 4e-040
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3 / +2
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
T +IC R M SLV T C K K QY + + SS WM HMV
Sbjct: 41 T*VICYSR*MLSLVASTHCFKSKQPVQYPLWGRCLLSSWAWMCHMV 178
>gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42F08
5-PRIME, mRNA sequence
Length = 520
Score = 356 bits (771), Expect = 9e-098
Identities = 138/170 (81%), Positives = 156/170 (91%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVV SR+WPL+S+YRASV +QS +LEM+ SLFKP+GT+DDGL+RE LIDFYTSS
Sbjct: 10 DIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSS 189
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
GKRKP+ IIIFRDGVSESQF QV+NIELDQIIEACKFLDE W+PKFT+IVAQKNHHTKFF
Sbjct: 190 GKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTLIVAQKNHHTKFF 369
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEI 661
SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI
Sbjct: 370 MPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEI 519
Score = 226 bits (487), Expect = 1e-058
Identities = 112/170 (65%), Positives = 123/170 (72%)
Frame = -2 / -3
Query: 660 ISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWWFF*A 481
ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG TLSGD KN VW FF*A
Sbjct: 518 ISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*A 339
Query: 480 TITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPELV*KXXXXX 301
TI+VNLG FSS+NL AS+I*S+SM T +N LSLTPSLK+++ SGF FPELV*K
Sbjct: 338 TISVNLGFQFSSKNLQASII*SNSMFST*LNWLSLTPSLKMMI*SGFLFPELV*KSMRHS 159
Query: 300 XXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLNNE IISS D T+ALY E RGH RE TTAA +G+S
Sbjct: 158 RTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTAAMDGIS 9
Score = 166 bits (357), Expect = 1e-040
Identities = 79/166 (47%), Positives = 114/166 (68%)
Frame = -1 / -2
Query: 661 YLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVVVLLS 482
YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R++IV R ++L VV+LLS
Sbjct: 519 YLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLS 340
Query: 481 NNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEVDQ*F 302
NN ELG P+ IQ+L L++LI +V L KL ++IPE++ + WFSLSR VEV++
Sbjct: 339 NNQCELGVPIFIQELAGLNNLI*FDVQHLIKLALANTIPEDDDLIWFSLSRTGVEVNETL 160
Query: 301 PDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
P++AII S+ L+Q +HF* L H* I RDK P +RTN+ CN
Sbjct: 159 PNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCN 22
Score = 147 bits (315), Expect = 8e-035
Identities = 71/150 (47%), Positives = 94/150 (62%)
Frame = +1 / +3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MA L I* SA + + RND +V A * *WP G++ LLH WK KTR+ ++ QG
Sbjct: 48 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 227
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
W + V G +H S++ G+ V G*++ QVH DCCS+E PH+V I+ QC SW+C
Sbjct: 228 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVHTDCCSEESPHKVFHAWIS*QCPSWHC 407
Query: 550 GG**SLPS*ELRLLHVCTCWDDWNNKAHPL 639
* LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 408 C**CCLPSKEL*LLHVRSCWNDWDNKANTL 497
Score = 138 bits (297), Expect = 2e-032
Identities = 79/170 (46%), Positives = 97/170 (57%)
Frame = -3 / -1
Query: 662 LSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVMPSERTWCGGSFE 483
+S A + + ALL QS QH TC+S +S DG+ +Y Q QE HC + + +T CG S E
Sbjct: 520 VSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSE 341
Query: 482 QQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*LCVLVFAFQS*CRSRSVI 303
QQS *TW + HP T P+* D +C P *T * HP*+* LVF+FQ+ CRS+
Sbjct: 340 QQSV*TWGSNFHPRTCRPQ*FDLIRCSAPD*TGSR*HHP*R**SDLVFSFQNWCRSQ*DT 161
Query: 302 PG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
P GHH Q+ A*T SFL AL YI R AI EN LQ VY
Sbjct: 160 PEQGHHLQFLVA*TMNLSFLALVTASALKPYISRQGAILENQQLLQWMVY 11
Score = 64.8 bits (135), Expect(2) = 2e-013
Identities = 44/100 (44%), Positives = 52/100 (52%)
Frame = +3 / +2
Query: 165 LQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESEN 344
LQ+ LVL NG LS +I QC + *K* C S L MMA G+ TST LE EN
Sbjct: 23 LQQLLVLENGPLSRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLEREN 202
Query: 345 QNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
Q SGM + SL R T + I+ R S WM+ G P
Sbjct: 203 QIRSSSSGMVLARASLIRC*TSN*IKLLRPASSWMKIGTP 322
Score = 30.4 bits (60), Expect(2) = 2e-013
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3 / +2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR 659
TM L L I+ AI T TC ML *L QQG + C R
Sbjct: 386 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMR 517
>gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 5', mRNA sequence
Length = 593
Score = 275 bits (595), Expect(2) = 1e-095
Identities = 110/139 (79%), Positives = 125/139 (89%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVV SR+WPL+S+YRASV +QS +LEM+ SLFKP+GT+DDGL+RE LIDFYTSS
Sbjct: 175 DIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSS 354
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
GKRKP+ IIIFRDGVSESQF QV+NIELDQIIEACKFLDE W+PKFT+IVAQKNHHTKFF
Sbjct: 355 GKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTLIVAQKNHHTKFF 534
Query: 512 QTASPDNVLPGTVVDSKVC 568
SPDNV PGTVVD+ VC
Sbjct: 535 MPGSPDNVPPGTVVDNAVC 591
Score = 178 bits (384), Expect(2) = 8e-061
Identities = 87/140 (62%), Positives = 98/140 (70%)
Frame = -2 / -1
Query: 570 WQTLLSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWV 391
WQT LSTTVPG TLSGD KN VW FF*ATI+VNLG FSS+NL AS+I*S+SM T +
Sbjct: 593 WQTALSTTVPGGTLSGDPGMKNFVW*FF*ATISVNLGFQFSSKNLQASII*SNSMFST*L 414
Query: 390 N*LSLTPSLKIIMCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDAL 211
N LSLTPSLK+++ SGF FPELV*K GLNNE IISS D T+AL
Sbjct: 413 NWLSLTPSLKMMI*SGFLFPELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEAL 234
Query: 210 YLEIRGH*RELTTAATEGLS 151
Y E RGH RE TTAA +G+S
Sbjct: 233 YFETRGHSREPTTAAMDGIS 174
Score = 127 bits (271), Expect(2) = 5e-034
Identities = 64/135 (47%), Positives = 92/135 (68%)
Frame = -1 / -3
Query: 568 ANFTIHHSSRKNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGK 389
A+ I++S+R++IV R ++L VV+LLSNN ELG P+ IQ+L L++LI +V L K
Sbjct: 591 ADSIINNSARRDIVRRSRHEKLCVVILLSNNQCELGVPIFIQELAGLNNLI*FDVQHLIK 412
Query: 388 LTFTDSIPENNYVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSI 209
L ++IPE++ + WFSLSR VEV++ P++AII S+ L+Q +HF* L H* I
Sbjct: 411 LALANTIPEDDDLIWFSLSRTGVEVNETLPNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPI 232
Query: 208 SRDKRPLTRTNHRCN 164
RDK P +RTN+ CN
Sbjct: 231 FRDKGPFSRTNNCCN 187
Score = 111 bits (238), Expect(2) = 6e-026
Identities = 65/139 (46%), Positives = 78/139 (56%)
Frame = -3 / -2
Query: 569 GKLYYPPQFQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG* 390
G+ +Y Q QE HC + + +T CG S EQQS *TW + HP T P+* D +C P *
Sbjct: 592 GRQHYQQQCQEGHCQEIQA*KTLCGDSSEQQSV*TWGSNFHPRTCRPQ*FDLIRCSAPD* 413
Query: 389 TDFH*LHP*K*LCVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLY 210
T * HP*+* LVF+FQ+ CRS+ P GHH Q+ A*T SFL AL Y
Sbjct: 412 TGSR*HHP*R**SDLVFSFQNWCRSQ*DTPEQGHHLQFLVA*TMNLSFLALVTASALKPY 233
Query: 209 I*R*EAIDEN*PPLQPKVY 153
I R AI EN LQ VY
Sbjct: 232 ISRQGAILENQQLLQWMVY 176
Score = 110 bits (234), Expect(2) = 5e-034
Identities = 53/120 (44%), Positives = 72/120 (60%)
Frame = +1 / +3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MA L I* SA + + RND +V A * *WP G++ LLH WK KTR+ ++ QG
Sbjct: 213 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 392
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
W + V G +H S++ G+ V G*++ QVH DCCS+E PH+V I+ QC SW+C
Sbjct: 393 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVHTDCCSEESPHKVFHAWIS*QCPSWHC 572
Score = 95.0 bits (201), Expect(2) = 1e-095
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KINAKLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG PGQ
Sbjct: 22 YLTNVLLKINAKLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPGQ 171
Score = 75.3 bits (158), Expect(2) = 8e-061
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIPKM VGT DT GI D S CS+EF PPSFALIF RY
Sbjct: 170 CPGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSFALIFSKTFVRY 21
Score = 64.8 bits (135), Expect(2) = 2e-014
Identities = 44/100 (44%), Positives = 52/100 (52%)
Frame = +3 / +2
Query: 165 LQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESEN 344
LQ+ LVL NG LS +I QC + *K* C S L MMA G+ TST LE EN
Sbjct: 188 LQQLLVLENGPLSRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLEREN 367
Query: 345 QNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
Q SGM + SL R T + I+ R S WM+ G P
Sbjct: 368 QIRSSSSGMVLARASLIRC*TSN*IKLLRPASSWMKIGTP 487
Score = 54.2 bits (112), Expect(2) = 5e-034
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
EDQCK WW+EL A +*++ T+C+ + HL GC W
Sbjct: 42 EDQCKTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 158
Score = 37.3 bits (75), Expect(2) = 5e-034
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LS +M +IH+ D+ L + Y FNL Q V +TK CIDL Q I Q+
Sbjct: 171 LSRGSMGHIHSQDESWDL*YKRYTWGHFNL*Q*VHSTKFCIDLQQNICQI 22
Score = 33.6 bits (67), Expect(2) = 2e-014
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
*RSMQ+LV *T C KLK + Y + ++ SS WM M
Sbjct: 41 *RSMQNLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 157
Score = 25.4 bits (49), Expect(2) = 6e-026
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 68 QLAATSSDHQALH*SSS 18
Q A SS HQ LH*SS+
Sbjct: 88 QFVAVSSFHQVLH*SSA 38
>gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006G18f, mRNA sequence
Length = 1070
Score = 221 bits (477), Expect(4) = 4e-093
Identities = 90/119 (75%), Positives = 104/119 (87%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVV SR+WPL+S+YRASV +QS +LEM+ SLFKP+GT+DDGL+RE LIDFYTSS
Sbjct: 307 DIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSS 486
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKF 508
GKRKP+ IIFRDGVSESQF QV+NIELDQIIEACK LDE W+PKFT+IVAQKN F
Sbjct: 487 GKRKPDQNIIFRDGVSESQFNQVLNIELDQIIEACKVLDENWNPKFTLIVAQKNTTXSF 663
Score = 134 bits (288), Expect(4) = 2e-056
Identities = 68/114 (59%), Positives = 77/114 (67%)
Frame = -2 / -1
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPELV*KX 313
FF*ATI+VNLG FSS+ L AS+I*S+SM T +N LSLTPSLK+I SGF FPELV*K
Sbjct: 647 FF*ATISVNLGFQFSSKTLQASII*SNSMFST*LNWLSLTPSLKMIF*SGFLFPELV*KS 468
Query: 312 XXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLNNE IISS D T+ALY E RGH RE TTAA +G+S
Sbjct: 467 MRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTAAMDGIS 306
Score = 109 bits (233), Expect(2) = 8e-029
Identities = 53/110 (48%), Positives = 72/110 (65%)
Frame = -1 / -3
Query: 493 VLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEV 314
+LLSNN ELG P+ IQ L++LI +V L KL ++IPE++ + WFSLSR VEV
Sbjct: 648 ILLSNNQCELGVPIFIQDFAGLNNLI*FDVQHLIKLALANTIPEDDILIWFSLSRTGVEV 469
Query: 313 DQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
++ P++AII S+ L+Q +HF* L H* I RDK P +RTN+ CN
Sbjct: 468 NETLPNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCN 319
Score = 95.0 bits (201), Expect(4) = 4e-093
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KINAKLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG PGQ
Sbjct: 154 YLTNVLLKINAKLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPGQ 303
Score = 87.2 bits (184), Expect(2) = 1e-018
Identities = 56/126 (44%), Positives = 65/126 (51%)
Frame = -3 / -2
Query: 530 CLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*LC 351
C P + S EQQS *TW + HP P+* D +C P *T * HP*+*
Sbjct: 685 CQXDPGMKNXVWYSSEQQSV*TWGSNFHPRLCRPQ*FDLIRCSAPD*TGSR*HHP*R*YS 506
Query: 350 VLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
LVF+FQ+ CRS+ P GHH Q+ A*T SFL AL YI R AI EN
Sbjct: 505 DLVFSFQNWCRSQ*DTPEQGHHLQFLVA*TMNLSFLALVTASALKPYISRQGAILENQQL 326
Query: 170 LQPKVY 153
LQ VY
Sbjct: 325 LQWMVY 308
Score = 82.2 bits (173), Expect(3) = 1e-028
Identities = 43/101 (42%), Positives = 58/101 (57%)
Frame = +1 / +3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MA L I* SA + + RND +V A * *WP G++ LLH WK KTR+ + QG
Sbjct: 345 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSEYHLQG 524
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKE 492
W + V G +H S++ G+ G*++ QVH DCCS+E
Sbjct: 525 WC*REPV*SGAEHRIRSNY*GLQSLG*KLEPQVHTDCCSEE 647
Score = 75.3 bits (158), Expect(4) = 2e-056
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIPKM VGT DT GI D S CS+EF PPSFALIF RY
Sbjct: 302 CPGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSFALIFSKTFVRY 153
Score = 62.9 bits (131), Expect(3) = 1e-020
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = +3 / +2
Query: 165 LQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESEN 344
LQ+ LVL NG LS +I QC + *K* C S L MMA G+ TST LE EN
Sbjct: 320 LQQLLVLENGPLSRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLEREN 499
Query: 345 QNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
Q SGM + SL R T + I+ R WM+ G P
Sbjct: 500 QIRISSSGMVLARASLIRC*TSN*IKLLRPAKSWMKIGTP 619
Score = 54.2 bits (112), Expect(3) = 1e-028
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
EDQCK WW+EL A +*++ T+C+ + HL GC W
Sbjct: 174 EDQCKTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 290
Score = 51.5 bits (106), Expect(4) = 4e-093
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +1
Query: 626 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
R THYH LHDE +AD++Q+ HSLSYVY
Sbjct: 778 RATHYHXLHDENTLAADDLQDLGHSLSYVY 867
Score = 40.5 bits (82), Expect(3) = 1e-020
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2 / +3
Query: 452 KWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGT 622
K P+ + +HT FF S +V TVVD+ VCHP N M+GT
Sbjct: 606 KLEPQVHTDCCSEEYHTXFFMPGSX*HVPXCTVVDNAVCHPGNMTXTCALMLEMMGT 776
Score = 39.6 bits (80), Expect(4) = 2e-056
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 621 VPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWW 493
VPII + + F GWQT LSTTV T D KN VW+
Sbjct: 775 VPIISSMSAHVXVIFPGWQTALSTTVQXGTCQXDPGMKNXVWY 647
Score = 37.3 bits (75), Expect(2) = 8e-029
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LS +M +IH+ D+ L + Y FNL Q V +TK CIDL Q I Q+
Sbjct: 303 LSRGSMGHIHSQDESWDL*YKRYTWGHFNL*Q*VHSTKFCIDLQQNICQI 154
Score = 33.6 bits (67), Expect(3) = 1e-020
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
*RSMQ+LV *T C KLK + Y + ++ SS WM M
Sbjct: 173 *RSMQNLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 289
Score = 31.8 bits (63), Expect(4) = 4e-093
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 575 KNFDFYMCAHAGMIGTTRP 631
+ +D YMCAHAG G T P
Sbjct: 728 RKYDXYMCAHAGNDGDTGP 784
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1 / +1
Query: 577 ELRLLHVCTCWDDWNNKA 630
E+ LLHV +CW W ++A
Sbjct: 730 EI*LLHVRSCWK*WGHRA 783
Score = 26.3 bits (51), Expect(4) = 2e-056
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGL 625
YT*+ E SC SSA SSC * V L
Sbjct: 866 YT*ERECPRSCKSSAASVFSSCXIW*CVAL 777
Score = 25.4 bits (49), Expect(2) = 1e-018
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 68 QLAATSSDHQALH*SSS 18
Q A SS HQ LH*SS+
Sbjct: 220 QFVAVSSFHQVLH*SSA 170
>gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. vulgare cDNA clone HB12C12
5-PRIME, mRNA sequence
Length = 471
Score = 330 bits (716), Expect = 4e-090
Identities = 131/147 (89%), Positives = 140/147 (95%)
Frame = +2 / +2
Query: 275 GTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEK 454
GT DDGLIRESLIDFYTSSGKRKP+ +IIFRDGVSESQFTQVINIEL+QIIEACK LD+K
Sbjct: 2 GTRDDGLIRESLIDFYTSSGKRKPDQVIIFRDGVSESQFTQVINIELEQIIEACKCLDDK 181
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPT 634
W PKFTVIVAQKNHHT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RPT
Sbjct: 182 WEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPT 361
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 362 HYHVLHDEIGFSADELQEFVHSLSYVY 442
Score = 228 bits (492), Expect = 3e-059
Identities = 106/133 (79%), Positives = 112/133 (84%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 441 YT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 262
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHASMI SSSM +TWVN LSLTPSLK+I
Sbjct: 261 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMICSSSMFITWVNWLSLTPSLKMI 82
Query: 354 MCSGFRFPELV*K 316
SGFRFPELV*K
Sbjct: 81 TWSGFRFPELV*K 43
Score = 183 bits (395), Expect = 7e-046
Identities = 81/144 (56%), Positives = 108/144 (75%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 442 VHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 263
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI W L++ GV+VLLSNN ELG PL+++ L CLDDL++L+V LGKL F DSIPE++
Sbjct: 262 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKLAFADSIPEDD 83
Query: 355 YVFWFSLSRASVEVDQ*FPDEAII 284
+ W L R SVEV++*FP+ AII
Sbjct: 82 NLVWLPLPRTSVEVNK*FPN*AII 11
Score = 177 bits (382), Expect = 4e-044
Identities = 79/143 (55%), Positives = 93/143 (65%)
Frame = +1 / +1
Query: 286 *WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQ 465
*WP+ GIT LLH* W+A+ R + QGWSQ K VYPG +H A +DHRGM V +V Q
Sbjct: 13 *WPNSGITY*LLH*FWEAEARPGYHLQGWSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQ 192
Query: 466 VHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
VH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A+ L C
Sbjct: 193 VHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEANALPC 372
Query: 646 SARRDRFLCRRDAGVCSFAILRV 714
SA D R GVC A L V
Sbjct: 373 SA**DWLQRGRAPGVCPLAFLCV 441
Score = 159 bits (342), Expect = 1e-038
Identities = 79/143 (55%), Positives = 91/143 (63%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 440 THKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 261
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*L 354
H L S + WC GS EQQ *TW T T MPR*S A+C PG*T F *LHP*+*
Sbjct: 260 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQARCLSPG*TGFR*LHP*R** 81
Query: 353 CVLVFAFQS*CRSRSVIPG*GHH 285
L A Q+*CRS+ VIP GHH
Sbjct: 80 PGLASASQN*CRSQ*VIPELGHH 12
Score = 128 bits (274), Expect = 3e-029
Identities = 70/143 (48%), Positives = 76/143 (53%)
Frame = +3 / +3
Query: 285 MMASSGNH*STSTLALESENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
MMA GNH TSTL L S +Q SGMES K SLPR T S RSSRH S SG P
Sbjct: 12 MMA*FGNHLLTSTLVLGSGSQTRLSSSGMESAKASLPR**TSSLSRSSRHASALTTSGSP 191
Query: 465 XXXXXXXXXXXXXXXFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIM 644
R+ Q MF L WWI K AI RT TSTCV MLG*L ++G M
Sbjct: 192 SSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQRITM 371
Query: 645 FCTTR*VSLQTRCRSLFIRYLTC 713
FC R S +T RSL R+L C
Sbjct: 372 FCMMRLASARTSSRSLSTRFLMC 440
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 273 bits (590), Expect = 9e-073
Identities = 107/119 (89%), Positives = 114/119 (95%)
Frame = +2 / +1
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVL 538
IFRDGVSESQFTQVINIEL+QIIEACK LD+KW PKFTVIVAQKNHHT+FFQT SP+NV
Sbjct: 1 IFRDGVSESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVP 180
Query: 539 PGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PGTVVD +VCHPKNFDFYMCAHAGMIGT+RPTHYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 181 PGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVY 357
Score = 203 bits (437), Expect = 1e-051
Identities = 94/118 (79%), Positives = 99/118 (83%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 356 YT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 177
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHASMI SSSM +TWVN LSLTPSLK
Sbjct: 176 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMICSSSMFITWVNWLSLTPSLK 3
Score = 156 bits (336), Expect = 1e-037
Identities = 68/119 (57%), Positives = 90/119 (75%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 357 VHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 178
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPEN 359
NI W L++ GV+VLLSNN ELG PL+++ L CLDDL++L+V LGKL F DSIPE+
Sbjct: 177 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKLAFADSIPED 1
Score = 149 bits (319), Expect = 2e-035
Identities = 66/117 (56%), Positives = 76/117 (64%)
Frame = +1 / +3
Query: 364 QGWSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSW 543
QGWSQ K VYPG +H A +DHRGM V +V QVH CCS+EP HQ+ D R+CSSW
Sbjct: 6 QGWSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSW 185
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
GG* S+PS EL LLHVC CWDDW+ +A+ L CSA D R GVC A L V
Sbjct: 186 YGGG*TSVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCV 356
Score = 137 bits (294), Expect = 6e-032
Identities = 65/118 (55%), Positives = 75/118 (63%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 355 THKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 176
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K 360
H L S + WC GS EQQ *TW T T MPR*S A+C PG*T F *LHP*+
Sbjct: 175 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQARCLSPG*TGFR*LHP*R 2
Score = 109 bits (233), Expect = 2e-023
Identities = 57/117 (48%), Positives = 62/117 (52%)
Frame = +3 / +2
Query: 363 SGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFL 542
SGMES K SLPR T S RSSRH S SG P R+ Q MF L
Sbjct: 5 SGMESAKASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLL 184
Query: 543 ELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
WWI K AI RT TSTCV MLG*L ++G MFC R S +T RSL R+L C
Sbjct: 185 VRWWINKCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMC 355
>gb|BU970597.1|BU970597 HB15B24r BC Hordeum vulgare subsp. vulgare cDNA clone HB15B24
5-PRIME, mRNA sequence
Length = 455
Score = 214 bits (461), Expect(2) = 2e-071
Identities = 85/108 (78%), Positives = 99/108 (91%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVV SR+WPL+S+YRASV +QS +LEM+ SLFKP+GT+DDGL+RE LIDFYTSS
Sbjct: 132 DIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSS 311
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTV 475
GKRKP+ IIIFRDGVSESQF QV+NIELDQIIEACKFLDE W+PKFT+
Sbjct: 312 GKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTL 455
Score = 124 bits (266), Expect(2) = 3e-041
Identities = 62/108 (57%), Positives = 73/108 (67%)
Frame = -2 / -2
Query: 474 TVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPELV*KXXXXXXX 295
+VNLG FSS+NL AS+I*S+SM T +N LSLTPSLK+++ SGF FPELV*K
Sbjct: 454 SVNLGFQFSSKNLQASII*SNSMFST*LNWLSLTPSLKMMI*SGFLFPELV*KSMRHSRT 275
Query: 294 XXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLNNE IISS D T+ALY E RGH RE TTAA +G+S
Sbjct: 274 RPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTAAMDGIS 131
Score = 99.6 bits (211), Expect = 2e-020
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = -1 / -1
Query: 469 ELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEVDQ*FPDEA 290
ELG P+ IQ+L L++LI +V L KL ++IPE++ + WFSLSR VEV++ P++A
Sbjct: 449 ELGVPIFIQELAGLNNLI*FDVQHLIKLALANTIPEDDDLIWFSLSRTGVEVNETLPNKA 270
Query: 289 IIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
II S+ L+Q +HF* L H* I RDK P +RTN+ CN
Sbjct: 269 IIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCN 144
Score = 79.0 bits (166), Expect = 3e-014
Identities = 50/106 (47%), Positives = 58/106 (54%)
Frame = -3 / -3
Query: 470 *TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*LCVLVFAFQS*CRSRSVIPG*G 291
*TW + HP T P+* D +C P *T * HP*+* LVF+FQ+ CRS+ P G
Sbjct: 450 *TWGSNFHPRTCRPQ*FDLIRCSAPD*TGSR*HHP*R**SDLVFSFQNWCRSQ*DTPEQG 271
Query: 290 HHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
HH Q+ A*T SFL AL YI R AI EN LQ VY
Sbjct: 270 HHLQFLVA*TMNLSFLALVTASALKPYISRQGAILENQQLLQWMVY 133
Score = 75.8 bits (159), Expect(2) = 2e-071
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
KLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG PGQ
Sbjct: 12 KLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPGQ 128
Score = 70.7 bits (148), Expect(2) = 7e-019
Identities = 39/94 (41%), Positives = 54/94 (57%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MA L I* SA + + RND +V A * *WP G++ LLH WK KTR+ ++ QG
Sbjct: 170 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 349
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVH 471
W + V G +H S++ G+ V G*++ QVH
Sbjct: 350 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVH 451
Score = 64.8 bits (135), Expect(2) = 3e-012
Identities = 44/100 (44%), Positives = 52/100 (52%)
Frame = +3 / +1
Query: 165 LQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESEN 344
LQ+ LVL NG LS +I QC + *K* C S L MMA G+ TST LE EN
Sbjct: 145 LQQLLVLENGPLSRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLEREN 324
Query: 345 QNT*LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
Q SGM + SL R T + I+ R S WM+ G P
Sbjct: 325 QIRSSSSGMVLARASLIRC*TSN*IKLLRPASSWMKIGTP 444
Score = 63.8 bits (133), Expect(2) = 3e-041
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2 / -2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
CPG P +TSIPKM VGT DT GI D S CS+EF PPSF
Sbjct: 127 CPGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSF 11
Score = 42.8 bits (87), Expect(2) = 7e-019
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 34 KAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
K WW+EL A +*++ T+C+ + HL GC W
Sbjct: 11 KTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 115
Score = 26.3 bits (51), Expect(2) = 3e-012
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3 / +1
Query: 24 RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
R ++LV *T C KLK + Y + ++ SS WM M
Sbjct: 1 RHEENLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 114
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 257 bits (555), Expect = 6e-068
Identities = 100/112 (89%), Positives = 107/112 (95%)
Frame = +2 / +1
Query: 380 ESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDS 559
ESQFTQVINIEL+QIIEACK LD+KW PKFTVIVAQKNHHT+FFQT SP+NV PGTVVD
Sbjct: 13 ESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDK 192
Query: 560 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+VCHPKNFDFYMCAHAGMIGT+RPTHYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 193 QVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVY 348
Score = 189 bits (408), Expect = 1e-047
Identities = 88/112 (78%), Positives = 93/112 (83%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 347 YT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 168
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LS 379
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHASMI SSSM +TWVN LS
Sbjct: 167 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMICSSSMFITWVNWLS 12
Score = 144 bits (309), Expect = 5e-034
Identities = 63/112 (56%), Positives = 84/112 (75%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 348 VHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 169
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTF 380
NI W L++ GV+VLLSNN ELG PL+++ L CLDDL++L+V LGKL F
Sbjct: 168 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKLAF 13
Score = 136 bits (292), Expect = 1e-031
Identities = 61/111 (54%), Positives = 71/111 (63%)
Frame = +1 / +3
Query: 382 KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG** 561
K VYPG +H A +DHRGM V +V QVH CCS+EP HQ+ D R+CSSW GG*
Sbjct: 15 KPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*T 194
Query: 562 SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
S+PS EL LLHVC CWDDW+ +A+ L CSA D R GVC A L V
Sbjct: 195 SVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCV 347
Score = 127 bits (271), Expect = 9e-029
Identities = 60/111 (54%), Positives = 69/111 (62%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 346 THKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 167
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDF 381
H L S + WC GS EQQ *TW T T MPR*S A+C PG*T F
Sbjct: 166 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQARCLSPG*TGF 14
Score = 98.7 bits (209), Expect = 3e-020
Identities = 52/111 (46%), Positives = 57/111 (51%)
Frame = +3 / +2
Query: 381 KVSLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFLELWWIV 560
K SLPR T S RSSRH S SG P R+ Q MF L WWI
Sbjct: 14 KASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWIN 193
Query: 561 KFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
K AI RT TSTCV MLG*L ++G MFC R S +T RSL R+L C
Sbjct: 194 KCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMC 346
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 254 bits (550), Expect = 3e-067
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = +2 / +1
Query: 383 SQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSK 562
SQFTQVINIEL+QIIEACK LD+KW PKFTVIVAQKNHHT+FFQT SP+NV PGTVVD +
Sbjct: 1 SQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQ 180
Query: 563 VCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
VCHPKNFDFYMCAHAGMIGT+RPTHYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 181 VCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVY 333
Score = 188 bits (404), Expect = 4e-047
Identities = 86/109 (78%), Positives = 91/109 (83%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 332 YT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 153
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN 388
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHASMI SSSM +TWVN
Sbjct: 152 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMICSSSMFITWVN 6
Score = 141 bits (303), Expect = 3e-033
Identities = 62/110 (56%), Positives = 83/110 (75%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 333 VHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 154
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKL 386
NI W L++ GV+VLLSNN ELG PL+++ L CLDDL++L+V LGKL
Sbjct: 153 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKL 4
Score = 134 bits (288), Expect = 4e-031
Identities = 60/109 (55%), Positives = 70/109 (64%)
Frame = +1 / +3
Query: 388 VYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SL 567
VYPG +H A +DHRGM V +V QVH CCS+EP HQ+ D R+CSSW GG* S+
Sbjct: 6 VYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSV 185
Query: 568 PS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
PS EL LLHVC CWDDW+ +A+ L CSA D R GVC A L V
Sbjct: 186 PSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCV 332
Score = 124 bits (266), Expect = 4e-028
Identities = 59/109 (54%), Positives = 68/109 (62%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 331 THKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 152
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*T 387
H L S + WC GS EQQ *TW T T MPR*S A+C PG*T
Sbjct: 151 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQARCLSPG*T 5
Score = 96.4 bits (204), Expect = 2e-019
Identities = 51/109 (46%), Positives = 56/109 (51%)
Frame = +3 / +2
Query: 387 SLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFLELWWIVKF 566
SLPR T S RSSRH S SG P R+ Q MF L WWI K
Sbjct: 5 SLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKC 184
Query: 567 AILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
AI RT TSTCV MLG*L ++G MFC R S +T RSL R+L C
Sbjct: 185 AIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMC 331
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 226 bits (487), Expect = 1e-058
Identities = 86/97 (88%), Positives = 92/97 (94%)
Frame = +2 / +2
Query: 425 IEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAH 604
IEACK LD+KW PKFTVIVAQKNHHT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAH
Sbjct: 11 IEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAH 190
Query: 605 AGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
AGMIGT+RPTHYHVLHDEIGFSADE+QEFVHSLSYVY
Sbjct: 191 AGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVY 301
Score = 166 bits (358), Expect = 9e-041
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE TNS SSA KPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG
Sbjct: 300 YT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGG 121
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI 421
T SG+ V KNLV WFF*AT+TVNLG H SSR+LHAS++
Sbjct: 120 TFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASIL 7
Score = 124 bits (266), Expect = 4e-028
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+
Sbjct: 301 VHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRR 122
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLD 425
NI W L++ GV+VLLSNN ELG PL+++ L CLD
Sbjct: 121 NIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLD 11
Score = 115 bits (246), Expect = 2e-025
Identities = 52/98 (53%), Positives = 61/98 (62%)
Frame = +1 / +1
Query: 421 DHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVC 600
+ RGM V +V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC
Sbjct: 7 EDRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVC 186
Query: 601 TCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
CWDDW+ +A+ L CSA D R GVC A L V
Sbjct: 187 ACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCV 300
Score = 112 bits (239), Expect = 2e-024
Identities = 51/96 (53%), Positives = 59/96 (61%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K A+ QTP +R + + S AEH + A QSSQH HTCRS+SS DG L YPP +QEE
Sbjct: 299 THKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEE 120
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR 426
H L S + WC GS EQQ *TW T T MPR
Sbjct: 119 HFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR 12
Score = 87.7 bits (185), Expect = 6e-017
Identities = 44/98 (44%), Positives = 49/98 (50%)
Frame = +3 / +3
Query: 420 RSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFLELWWIVKFAILRTSTSTCV 599
R SRH S SG P R+ Q MF L WWI K AI RT TSTCV
Sbjct: 6 RGSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCV 185
Query: 600 HMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
MLG*L ++G MFC R S +T RSL R+L C
Sbjct: 186 RMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMC 299
>gb|BE194563.1|BE194563 HVSMEh0086A12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086A12f, mRNA sequence
Length = 841
Score = 95.5 bits (202), Expect(5) = 3e-051
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLN+LLQ+EA+ +IP V +VPTIILGMDVSHG PGQ A V
Sbjct: 207 YLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVSHGQPGQSDRPSIAAVV 386
Query: 182 S 184
S
Sbjct: 387 S 389
Score = 80.3 bits (169), Expect(4) = 2e-030
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKP 271
DRPS+AAVVSSR+WPLIS+YRASVHTQS + EMM+SLF P
Sbjct: 360 DRPSIAAVVSSREWPLISKYRASVHTQSPKHEMMASLFNP 479
Score = 74.4 bits (156), Expect(5) = 4e-045
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLNNE IIS L D VCTDALYLE+RGH RELTTAA EGLS
Sbjct: 478 GLNNEAIISCLGD*VCTDALYLEMRGHSRELTTAAMEGLS 359
Score = 70.7 bits (148), Expect(5) = 4e-045
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG*PC+TS+P+M+VGT T GI AS SN RPPS A I SKL +Y
Sbjct: 355 CPG*PCDTSMPRMIVGTFPTMGIARAASI*SNVLRPPSLAFILSSKLLKY 206
Score = 61.6 bits (128), Expect(4) = 1e-022
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -1 / -3
Query: 274 PRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
P +KQ GHH G L VH*CS+ RD+RPLTRT+HR N R +
Sbjct: 482 PGVKQ*GHHLVFG*LSVH*CSVFRDERPLTRTHHRSNGRPV 360
Score = 54.7 bits (113), Expect(5) = 3e-051
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2 / +3
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIEL 415
G RKP +IIFRDGVSE+ FTQVINIEL
Sbjct: 540 GSRKPNQVIIFRDGVSENPFTQVINIEL 623
Score = 50.6 bits (104), Expect(5) = 3e-051
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 269 PRGTDDDGLIRESLIDFYTSSGK 337
PRGT+DDGLIRESLIDF T+SGK
Sbjct: 476 PRGTEDDGLIRESLIDFSTTSGK 544
Score = 50.1 bits (103), Expect(4) = 2e-030
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1 / +2
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
*FA +D+C AWW + +A++ S NT C ++H +GC TW
Sbjct: 215 *FATQDKC*AWWPQHIASNRSSPCNTHCGEGAYYHPGHGCVTW 343
Score = 49.6 bits (102), Expect(5) = 3e-051
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 159 LRLQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRG 275
L L RW VLV+GL SL+ EHQCT + P+ +* P CL+ G
Sbjct: 367 LPLLRW*VLVSGLSSLNTEHQCTLSHPNTR*WPHCLTPG 483
Score = 48.7 bits (100), Expect(4) = 1e-022
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 142 MTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
+TM*+IH DD +L H Y CF+L+Q V+ TKL I L QI QV
Sbjct: 347 LTM*HIHAQDDSRHLPHNGYCTGCFDLKQCVEATKLSIYLE*QITQV 207
Score = 46.9 bits (96), Expect(5) = 4e-045
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGFRFP 331
SSM +TWVN SLTPSLKII GFR P
Sbjct: 622 SSMFITWVNGFSLTPSLKIITWFGFRLP 539
Score = 45.1 bits (92), Expect = 4e-004
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -3 / -2
Query: 275 PAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPK 159
P *T R S VW CALML I*R*EA EN PP Q K
Sbjct: 483 PRG*TMRPSSRVWVTECALMLCI*R*EATHENSPPQQWK 367
Score = 37.7 bits (76), Expect(3) = 3e-012
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAG 276
+AS+L*I SISAH + QTR+D L+V* G
Sbjct: 398 VASHL*IQSISAHSVTQTRDDGLIV*PRG 484
Score = 37.7 bits (76), Expect(5) = 4e-045
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 349 FWFSLSRASVEVDQ*FPDEAIIISTPRL 266
F F L R+S EV++*FP+EAII S+P L
Sbjct: 556 FGFRLPRSSGEVNK*FPNEAIIFSSPGL 473
Score = 35.0 bits (70), Expect(3) = 3e-012
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1 / +1
Query: 274 GY***WPHPGITDRLLH*LWKAKTRTHNYFQGWSQ*KSVYP 396
G * *WPH GIT LLH W+A ++T G K+ P
Sbjct: 481 GN*R*WPHSGITY*LLHYFWEAGSQTRLLSLGMGSAKTHLP 603
Score = 35.0 bits (70), Expect(3) = 3e-012
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3 / +1
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
T +IC R M SLV T C K K QY + + SS WM HMV
Sbjct: 208 T*VICYSR*MLSLVASTHCFKSKQPVQYPLWGRCLLSSWAWMCHMV 345
Score = 30.4 bits (60), Expect(4) = 1e-022
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 338 AFQS*CRSRSVIPG*GHHHQYP 273
A Q * RS+ VIP *GHH Q+P
Sbjct: 545 ASQK*WRSQ*VIPE*GHHLQFP 480
Score = 29.9 bits (59), Expect(4) = 2e-030
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +3 / +3
Query: 273 GVLMMMASSGNH*STSTLALESENQN 350
G L MMAS GNH TS L L S N
Sbjct: 480 GELKMMASFGNHLLTSPLLLGSRKPN 557
Score = 26.7 bits (52), Expect(4) = 2e-030
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1 / +2
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH 408
K + + Y GW Q K +YP +H
Sbjct: 542 KPEAKPGYYL*GWGQRKPIYPSDKH 616
Score = 25.8 bits (50), Expect(5) = 3e-051
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2 / +2
Query: 443 LDEKWSPKFTVIVAQKNHHTKFFQTASP 526
L + PKFTVIV K T+ F P
Sbjct: 653 LTTQGEPKFTVIVGLKEPFTQIFSYKFP 736
Score = 25.4 bits (49), Expect(5) = 4e-045
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3 / -2
Query: 563 LYYPPQFQEEHCLVMPSERTWCGGSFE 483
L PP+ ++EH E+ W GSF+
Sbjct: 774 LLIPPRTEKEHVRGNLYEKIWVKGSFK 694
Score = 23.5 bits (45), Expect(4) = 1e-022
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2 / -1
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLG 460
T SG V*KNL FF*A LG
Sbjct: 745 TCSGKFV*KNLGEGFF*ANNDCELG 671
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 114 bits (244), Expect(3) = 3e-048
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
+T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL DE GF+AD +Q+
Sbjct: 402 ETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQL 581
Query: 692 VHSLSYVY 715
++L Y Y
Sbjct: 582 TNNLCYTY 605
Score = 78.5 bits (165), Expect(3) = 3e-048
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = +2 / +3
Query: 272 RGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+GT G + L+ + KP II +RDGVSE QF QV+ E+D I +AC L
Sbjct: 144 KGTPVHGGMIRELLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQA 323
Query: 452 KWSPKFTVIVAQKNHHTKFF 511
+ PK T +V QK HHT+ F
Sbjct: 324 DYQPKVTFVVVQKRHHTRLF 383
Score = 66.6 bits (139), Expect(3) = 2e-018
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
C SA KP SS RT * VGL+VP IPA H *KS +GW L+STTVPGR
Sbjct: 574 CSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVGWHMLVSTTVPGR 425
Score = 37.3 bits (75), Expect(3) = 3e-048
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLF 265
PS+AAVV+S P I+ Y+A V Q R E++ L+
Sbjct: 15 PSIAAVVASMDLPEITNYKAVVSAQPPRQEIIQDLY 122
Score = 35.0 bits (70), Expect(3) = 2e-018
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LV F T V LG + ++ A ++ S S + TW N SLTPSL
Sbjct: 382 KSLV*CLFWTTTNVTLG**SACKDAQAFLMASISYIRTWANCPSLTPSL 236
Score = 30.4 bits (60), Expect(3) = 2e-018
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -2 / -1
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATEG 157
IIS L W T AL I G E TTAA +G
Sbjct: 109 IISCLGGWAETTAL*FVISGRSMEATTAAIDG 14
Score = 28.6 bits (56), Expect(2) = 1.5
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +3 / +1
Query: 537 FLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRS 689
FLE W +AI + STCV M Q T M + + VSL C S
Sbjct: 427 FLEPWLTPTYAIPPSLISTCVAMPVFRAQADQLTTMSSSMKTVSLPMGCSS 579
Score = 24.0 bits (46), Expect(2) = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 290 GLIRESLIDFYTSSG 334
G+IRE L+ FY +G
Sbjct: 165 GMIRELLVSFYKKTG 209
>gb|BU971696.1|BU971696 HB19G05r BC Hordeum vulgare subsp. vulgare cDNA clone HB19G05
5-PRIME, mRNA sequence
Length = 644
Score = 112 bits (239), Expect(2) = 7e-047
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVV SR+WPL+S+YRASV +QS +LEM+ SLFKP+GT+DDGL+RE LIDFYTSS
Sbjct: 463 DIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSS 642
Score = 95.0 bits (201), Expect(2) = 7e-047
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KINAKLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG PGQ
Sbjct: 310 YLTNVLLKINAKLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPGQ 459
Score = 75.3 bits (158), Expect(2) = 9e-027
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIPKM VGT DT GI D S CS+EF PPSFALIF RY
Sbjct: 458 CPGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSFALIFSKTFVRY 309
Score = 64.8 bits (135), Expect(2) = 9e-027
Identities = 32/61 (52%), Positives = 35/61 (57%)
Frame = -2 / -1
Query: 333 PELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
PELV*K GLNNE IISS D T+ALY E RGH RE TTAA +G+
Sbjct: 644 PELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTAAMDGI 465
Query: 153 S 151
S
Sbjct: 464 S 462
Score = 54.2 bits (112), Expect(2) = 2e-012
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
EDQCK WW+EL A +*++ T+C+ + HL GC W
Sbjct: 330 EDQCKTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 446
Score = 53.3 bits (110), Expect(2) = 4e-012
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = -1 / -3
Query: 331 RASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCN 164
R VEV++ P++AII S+ L+Q +HF* L H* I RDK P +RTN+ CN
Sbjct: 642 RTGVEVNETLPNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCN 475
Score = 42.3 bits (86), Expect(2) = 2e-005
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = -3 / -2
Query: 332 QS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
Q+ CRS+ P GHH Q+ A*T SFL AL YI R AI EN LQ VY
Sbjct: 643 QNWCRSQ*DTPEQGHHLQFLVA*TMNLSFLALVTASALKPYISRQGAILENQQLLQWMVY 464
Score = 37.3 bits (75), Expect(2) = 2e-006
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1 / +3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LW 333
MA L I* SA + + RND +V A * *WP G++ LLH W
Sbjct: 501 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFW 644
Score = 37.3 bits (75), Expect(2) = 2e-012
Identities = 26/56 (46%), Positives = 30/56 (53%)
Frame = +3 / +2
Query: 165 LQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLAL 332
LQ+ LVL NG LS +I QC + *K* C S L MMA G+ TST L
Sbjct: 476 LQQLLVLENGPLSRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVL 643
Score = 37.3 bits (75), Expect(2) = 4e-012
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LS +M +IH+ D+ L + Y FNL Q V +TK CIDL Q I Q+
Sbjct: 459 LSRGSMGHIHSQDESWDL*YKRYTWGHFNL*Q*VHSTKFCIDLQQNICQI 310
Score = 33.6 bits (67), Expect(2) = 2e-006
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +2
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
*RSMQ+LV *T C KLK + Y + ++ SS WM M
Sbjct: 329 *RSMQNLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 445
Score = 25.4 bits (49), Expect(2) = 2e-005
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 68 QLAATSSDHQALH*SSS 18
Q A SS HQ LH*SS+
Sbjct: 376 QFVAVSSFHQVLH*SSA 326
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 178 bits (384), Expect = 2e-044
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +2 / +1
Query: 470 TVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVL 649
T+IVAQKNHHTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+L
Sbjct: 40 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 219
Query: 650 HDEIGFSADEMQEFVHSLSYVY 715
HDEI F+AD++Q+ VHSLSYVY
Sbjct: 220 HDEIHFAADDLQDLVHSLSYVY 285
Score = 128 bits (274), Expect = 3e-029
Identities = 63/82 (76%), Positives = 65/82 (79%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 284 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 105
Query: 534 TLSGDAV*KNLVWWFF*ATITV 469
TLSGD KN VW FF*ATI+V
Sbjct: 104 TLSGDPGMKNFVW*FF*ATISV 39
Score = 90.0 bits (190), Expect = 1e-017
Identities = 41/82 (50%), Positives = 52/82 (63%)
Frame = +1 / +3
Query: 469 HCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+ DCCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 39 YTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYP 218
Query: 649 ARRDRFLCRRDAGVCSFAILRV 714
A D AG C+FA+L V
Sbjct: 219 A**DTLCRG*PAGSCAFALLCV 284
Score = 89.0 bits (188), Expect = 2e-017
Identities = 38/85 (44%), Positives = 60/85 (70%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 285 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 106
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG 461
+IV R ++L VV+LLSNN G
Sbjct: 105 DIVRRSRHEKLCVVILLSNNQCNWG 31
Score = 78.0 bits (164), Expect = 5e-014
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 283 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 104
Query: 533 HCLVMPSERTWCGGSFEQQS 474
HC + + +T CG S EQQS
Sbjct: 103 HCQEIQA*KTLCGDSSEQQS 44
Score = 40.9 bits (83), Expect(2) = 4e-006
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / +2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 98 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 277
Query: 708 TC 713
C
Sbjct: 278 MC 283
Score = 29.0 bits (57), Expect(2) = 4e-006
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2 / +3
Query: 440 FLDEKWSPKFTVIVAQKNHHTKF 508
FLDE W+P +T ++++ H F
Sbjct: 12 FLDENWNPSYTDCCSEESPHKVF 80
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 178 bits (384), Expect = 2e-044
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +2 / -2
Query: 470 TVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVL 649
T+IVAQKNHHTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+L
Sbjct: 640 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 461
Query: 650 HDEIGFSADEMQEFVHSLSYVY 715
HDEI F+AD++Q+ VHSLSYVY
Sbjct: 460 HDEIHFAADDLQDLVHSLSYVY 395
Score = 128 bits (274), Expect = 3e-029
Identities = 63/82 (76%), Positives = 65/82 (79%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 396 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 575
Query: 534 TLSGDAV*KNLVWWFF*ATITV 469
TLSGD KN VW FF*ATI+V
Sbjct: 576 TLSGDPGMKNFVW*FF*ATISV 641
Score = 92.7 bits (196), Expect = 2e-018
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = +1 / -1
Query: 469 HCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
H DCCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 641 HTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYP 462
Query: 649 ARRDRFLCRRDAGVCSFAILRV 714
A D AG C+FA+L V
Sbjct: 461 A**DTLCRG*PAGSCAFALLCV 396
Score = 87.7 bits (185), Expect = 6e-017
Identities = 37/80 (46%), Positives = 59/80 (73%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 395 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 574
Query: 535 NIVW*CRLKELGVVVLLSNN 476
+IV R ++L VV+LLSNN
Sbjct: 575 DIVRRSRHEKLCVVILLSNN 634
Score = 78.0 bits (164), Expect = 5e-014
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 397 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 576
Query: 533 HCLVMPSERTWCGGSFEQQS 474
HC + + +T CG S EQQS
Sbjct: 577 HCQEIQA*KTLCGDSSEQQS 636
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -3
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 582 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 403
Query: 708 TC 713
C
Sbjct: 402 MC 397
>gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D22
5-PRIME, mRNA sequence
Length = 615
Score = 175 bits (376), Expect = 3e-043
Identities = 69/105 (65%), Positives = 85/105 (80%)
Frame = +2 / +1
Query: 401 INIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKN 580
+N+E+DQII+A + + + PK TVI+AQKNHHTK FQ +PDNV GTVVDS + HPK
Sbjct: 10 VNLEVDQIIKAYQNMGQGPPPKITVIIAQKNHHTKLFQADAPDNVPAGTVVDSGIVHPKQ 189
Query: 581 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+DFYMCAHAG IGT+RPTHYHVL D+IGF+ DE+Q+ V SLSYVY
Sbjct: 190 YDFYMCAHAGPIGTSRPTHYHVLLDQIGFTPDELQKLVLSLSYVY 324
Score = 89.5 bits (189), Expect = 2e-017
Identities = 50/85 (58%), Positives = 55/85 (64%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+ SS KPI S +T**WVGL VPI PA AHM*KS G STTVP
Sbjct: 323 YT*ESERTSFWSSSGVKPI*SSKT**WVGLEVPIGPA*AHM*KSYCFG*TIPESTTVPAG 144
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLG 460
TLSG + + VW FF*A ITV G
Sbjct: 143 TLSGASAWNSFVW*FF*AIITVIFG 69
Score = 80.8 bits (170), Expect = 8e-015
Identities = 42/104 (40%), Positives = 58/104 (55%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+ R N L + ET L+ Q+MI+GGP + M THVE+ + RM N +H+S
Sbjct: 324 VHIGKRKN*FLEFIWCETNLIKQDMIMGGP*GAYRSRMSTHVEIILFRMNNTRVHYSPSW 145
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNV 404
NI+W L++ VV+LLSNN+ L L L L LI L +
Sbjct: 144 NIIWCISLEQFRVVILLSNNNCNLWRWPLTHILVSLYYLINLEI 13
Score = 59.3 bits (123), Expect = 2e-008
Identities = 32/78 (41%), Positives = 38/78 (48%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T + A E L N S +A HD+GWAL H HTCR+ + D + P Q Q E
Sbjct: 322 THRKAKELVSGVHLV*NQSDQARHDNGWALRCL*VPHEHTCRNHTVSDEQYPSPLQSQLE 143
Query: 533 HCLVMPSERTWCGGSFEQ 480
H LV CG SFEQ
Sbjct: 142 HYLVHQLGTVSCGDSFEQ 89
Score = 51.0 bits (105), Expect = 7e-006
Identities = 28/64 (43%), Positives = 31/64 (48%)
Frame = +3 / +2
Query: 522 HQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIR 701
HQ MF L L W I + STCV M QGPP IM C R VS Q R+ F R
Sbjct: 131 HQIMFQLGL*WTRVLFIRNSMISTCVLMRDL*APQGPPIIMSCLIRLVSHQMNSRN*FFR 310
Query: 702 YLTC 713
+ C
Sbjct: 311 FPMC 322
Score = 42.8 bits (87), Expect(2) = 5e-010
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1 / +3
Query: 418 SDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG 555
S+++G+ G ++ + CSKE PH+ + TR CSSW+C G
Sbjct: 27 SNNKGLPEYGSGATSKDYSYYCSKESPHETVPS*CTR*CSSWDCSG 164
Score = 40.5 bits (82), Expect(2) = 5e-010
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = +1 / +3
Query: 589 LHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
LHVC+C + KAHPLSC A D F R SFA L V
Sbjct: 198 LHVCSCGTYRHLKAHPLSCLA*SDWFHTR*TPETSSFAFLCV 323
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 174 bits (374), Expect = 5e-043
Identities = 64/79 (81%), Positives = 72/79 (91%)
Frame = +2 / +3
Query: 479 VAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDE 658
VAQKNHHTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDE
Sbjct: 12 VAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDE 191
Query: 659 IGFSADEMQEFVHSLSYVY 715
I F+AD++Q+ VHSLSYVY
Sbjct: 192 IHFAADDLQDLVHSLSYVY 248
Score = 124 bits (265), Expect = 6e-028
Identities = 61/79 (77%), Positives = 62/79 (78%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 247 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 68
Query: 534 TLSGDAV*KNLVWWFF*AT 478
TLSGD KN VW FF*AT
Sbjct: 67 TLSGDPGMKNFVW*FF*AT 11
Score = 86.8 bits (183), Expect = 1e-016
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +1 / +2
Query: 478 CCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARR 657
CCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A
Sbjct: 11 CCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA** 190
Query: 658 DRFLCRRDAGVCSFAILRV 714
D AG C+FA+L V
Sbjct: 191 DTLCRG*PAGSCAFALLCV 247
Score = 84.9 bits (179), Expect = 4e-016
Identities = 36/79 (45%), Positives = 58/79 (73%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 248 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 69
Query: 535 NIVW*CRLKELGVVVLLSN 479
+IV R ++L VV+LLSN
Sbjct: 68 DIVRRSRHEKLCVVILLSN 12
Score = 73.9 bits (155), Expect = 9e-013
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 246 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 67
Query: 533 HCLVMPSERTWCGGSFEQ 480
HC + + +T CG S EQ
Sbjct: 66 HCQEIQA*KTLCGDSSEQ 13
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / +1
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 61 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 240
Query: 708 TC 713
C
Sbjct: 241 MC 246
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 114 bits (244), Expect(2) = 7e-043
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
+T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL DE GF+AD +Q+
Sbjct: 253 ETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQL 432
Query: 692 VHSLSYVY 715
++L Y Y
Sbjct: 433 TNNLCYTY 456
Score = 79.4 bits (167), Expect(2) = 7e-043
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +2 / +1
Query: 284 DDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSP 463
+DG + L+ + KP II +RDGVSE QF QV+ E+D I +AC L + P
Sbjct: 7 EDGGMMRELLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQP 186
Query: 464 KFTVIVAQKNHHTKFF 511
K T +V QK HHT+ F
Sbjct: 187 KVTFVVVQKRHHTRLF 234
Score = 66.6 bits (139), Expect(2) = 2e-015
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
C SA KP SS RT * VGL+VP IPA H *KS +GW L+STTVPGR
Sbjct: 425 CSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVGWHMLVSTTVPGR 276
Score = 35.0 bits (70), Expect(2) = 2e-015
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LV F T V LG + ++ A ++ S S + TW N SLTPSL
Sbjct: 233 KSLV*CLFWTTTNVTLG**SACKDAQAFLMASISYIRTWANCPSLTPSL 87
>gb|BU998822.1|BU998822 HI12E07r HI Hordeum vulgare subsp. vulgare cDNA clone HI12E07
5-PRIME, mRNA sequence
Length = 556
Score = 133 bits (286), Expect(2) = 7e-040
Identities = 54/63 (85%), Positives = 61/63 (96%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
DRPS+AAVVSSR+WPLIS+YRA+VHTQS + EMM+SLFKPRGT+DDGLIRESLIDFYTSS
Sbjct: 368 DRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDFYTSS 547
Query: 332 GKR 340
GKR
Sbjct: 548 GKR 556
Score = 95.5 bits (202), Expect(2) = 6e-035
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLN+LLQ+EA+ +IP V +VPTIILGMDVSHG PGQ A V
Sbjct: 215 YLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVSHGQPGQSDRPSIAAVV 394
Query: 182 S 184
S
Sbjct: 395 S 397
Score = 87.7 bits (185), Expect(2) = 3e-032
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = -1 / -1
Query: 337 LSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRR 158
L R SVEV++*FP+EAII S+P KQ GHH G L VH CS+ RD+RPLTRT+HR N R
Sbjct: 553 LPRTSVEVNK*FPNEAIIFSSPWFKQ*GHHLLFG*LSVHCCSVFRDERPLTRTHHRSNGR 374
Query: 157 SI 152
+
Sbjct: 373 PV 368
Score = 82.2 bits (173), Expect(2) = 4e-024
Identities = 41/63 (65%), Positives = 42/63 (66%)
Frame = -2 / -2
Query: 339 RFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATE 160
RFPELV*K RGLNNE IIS L D VCT ALYLE+RGH RELTTAA E
Sbjct: 555 RFPELV*KSISDSRMRPSSSVPRGLNNEAIISCLGD*VCTVALYLEMRGHSRELTTAAME 376
Query: 159 GLS 151
GLS
Sbjct: 375 GLS 367
Score = 73.5 bits (154), Expect = 1e-012
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = -3 / -3
Query: 338 AFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPK 159
A Q+*CRS+ VIP *GHH Q+P *T R S VW CAL+L I*R*EA EN PP Q K
Sbjct: 554 ASQN*CRSQ*VIPE*GHHLQFPVV*TMRPSSPVWVTECALLLCI*R*EATHENSPPQQWK 375
Score = 72.1 bits (151), Expect(2) = 6e-035
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +3 / +3
Query: 159 LRLQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALES 338
L L RW VLV+GL SL+ E QCT + P+ +* P CL+ G L MMAS GNH TSTL L S
Sbjct: 375 LPLLRW*VLVSGLSSLNTEQQCTLSHPNRR*WPHCLNHGELKMMASFGNHLLTSTLVLGS 554
Score = 70.7 bits (148), Expect(2) = 3e-032
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / -2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG*PC+TS+P+M+VGT T GI AS SN RPPS A I SKL +Y
Sbjct: 363 CPG*PCDTSMPRMIVGTFPTMGIARAASI*SNVLRPPSLAFILSSKLLKY 214
Score = 60.6 bits (126), Expect(2) = 1e-013
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +1 / +1
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKA 339
+AS+L*I S SAH + QT +D L+V* G * *WPH GIT LLH* W+A
Sbjct: 406 VASHL*IQSNSAHSVTQTGDDGLIV*TTGN*R*WPHSGITY*LLH*FWEA 555
Score = 50.1 bits (103), Expect(2) = 7e-040
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1 / +1
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
*FA +D+C AWW + +A++ S NT C ++H +GC TW
Sbjct: 223 *FATQDKC*AWWPQHIASNRSSPCNTHCGEGAYYHPGHGCVTW 351
Score = 48.7 bits (100), Expect(2) = 4e-024
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -1
Query: 142 MTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
+TM*+IH DD +L H Y CF+L+Q V+ TKL I L QI QV
Sbjct: 355 LTM*HIHAQDDSRHLPHNGYCTGCFDLKQCVEATKLSIYLE*QITQV 215
Score = 35.0 bits (70), Expect(2) = 1e-013
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3 / +3
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
T +IC R M SLV T C K K QY + + SS WM HMV
Sbjct: 216 T*VICYSR*MLSLVASTHCFKSKQPVQYPLWGRCLLSSWAWMCHMV 353
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 105 bits (223), Expect(2) = 8e-039
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C HAG+ GT+RP +YHVL DE F+
Sbjct: 338 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCNHAGIQGTSRPANYHVLWDENKFT 517
Query: 671 ADEMQEFVHSLSYVY 715
ADE+Q L Y Y
Sbjct: 518 ADELQTLKKKLCYNY 562
Score = 75.3 bits (158), Expect(2) = 8e-039
Identities = 35/99 (35%), Positives = 52/99 (52%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q + P+ G + + L+ + + +KP+ II ++DGVSE QF
Sbjct: 38 AQAHRQELIQDPFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYKDGVSEGQFY 217
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 218 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 334
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS T** G +VP +PA H *KS +GWQ STTVPG
Sbjct: 531 CNSSAVNLFSSHST**LAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 385
Score = 39.1 bits (79), Expect(2) = 0.007
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L + E + +I+ P CS + S+ T VE+++ RMAN I++S+R+ +
Sbjct: 532 LQFISSELVFIP*YVIISRPACSLNASVVTQVEIKLGRMANL*INNSARQYV 377
Score = 29.5 bits (58), Expect(2) = 1e-009
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
K+LV F T V G S++ HA ++ SSS T N SLTPSL ++ GF
Sbjct: 333 KSLV*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGF 163
Score = 21.7 bits (41), Expect(2) = 0.007
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -3 / -3
Query: 512 ERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
++ WC + Q +* P T+MP
Sbjct: 335 QKAWCDAASGQLQK*LGAGNWAPRTHMP 252
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 113 bits (241), Expect(2) = 4e-038
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 162 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 341
Query: 671 ADEMQEFVHSLSYVY 715
ADE+Q ++L Y Y
Sbjct: 342 ADELQTLTNNLCYTY 386
Score = 64.8 bits (135), Expect(2) = 4e-038
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 365 RDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 12 RDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 158
Score = 61.1 bits (127), Expect(2) = 6e-015
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT**W G +VP +PA H *KS +GWQ STTVPG
Sbjct: 355 CNSSAVNLFSSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 209
Score = 54.2 bits (112), Expect = 8e-007
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + LV +NMIVG P CS + SM T VE+E RMA+ I++ +R+ +
Sbjct: 356 LQLISSKFVLVPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYV 201
Score = 40.5 bits (82), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +2
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLC 672
LPS +R L V CW N A PLSCS R++ C
Sbjct: 236 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC 343
Score = 40.5 bits (82), Expect = 0.010
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +3 / +1
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCR 686
I + AI + S STCV ML EQ G PTIMF TR L C+
Sbjct: 226 IRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCK 357
Score = 39.1 bits (79), Expect(2) = 6e-015
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LVW F T V G F S++ A ++ SSS TW N SLTPSL
Sbjct: 157 KSLVW*RFWTTTKVTGG**FGSKDAQAFLMASSSNNRTW*NCPSLTPSL 11
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 659 SRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
SR EHDSG A LF QH +T R+R DG+
Sbjct: 330 SRPREHDSGQAGLFPECQHGYTSRNRILSDGR 235
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 153 bits (329), Expect = 9e-037
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = +2 / +2
Query: 503 KFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEM 682
KFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++
Sbjct: 11 KFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDL 190
Query: 683 QEFVHSLSYVY 715
Q+ VHSLSYVY
Sbjct: 191 QDLVHSLSYVY 223
Score = 109 bits (233), Expect = 2e-023
Identities = 54/72 (75%), Positives = 56/72 (77%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 222 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 43
Query: 534 TLSGDAV*KNLV 499
TLSGD KN +
Sbjct: 42 TLSGDPGMKNFL 7
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 223 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 44
Query: 535 NIV 527
+IV
Sbjct: 43 DIV 35
Score = 68.0 bits (142), Expect = 5e-011
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +1 / +1
Query: 502 QVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRD 681
+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D
Sbjct: 10 EVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*P 189
Query: 682 AGVCSFAILRV 714
AG C+FA+L V
Sbjct: 190 AGSCAFALLCV 222
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 221 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 42
Query: 533 HC 528
HC
Sbjct: 41 HC 36
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / +3
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 36 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 215
Query: 708 TC 713
C
Sbjct: 216 MC 221
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 116 bits (247), Expect(2) = 3e-036
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE FSADEMQ ++L Y
Sbjct: 202 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCY 381
Query: 710 VY 715
Y
Sbjct: 382 TY 387
Score = 61.1 bits (127), Expect(2) = 5e-014
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -2 / -3
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N CISSAEK SS RT * GL+VP IPA *KS +GW STTVPG+
Sbjct: 362 NVCISSAEKLFSSQRTW**AGLLVPWIPA*LQR*KSNSVGWHIFESTTVPGK 207
Score = 55.6 bits (115), Expect(2) = 3e-036
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 371 GVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHT 502
GVSE QF QV+ ELD I +AC L+ + P T +V QK HHT
Sbjct: 17 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHT 148
Score = 47.8 bits (98), Expect = 6e-005
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
LH VC E L+ ++M+V P C+ S+ T VE+++ +A I++SSR N+
Sbjct: 357 LHFVC*EVVLIPEDMVVSWPTCTLDSSVTTEVEIKLRWVAYLRINNSSR*NV 202
Score = 35.9 bits (72), Expect(2) = 5e-014
Identities = 26/63 (41%), Positives = 30/63 (47%)
Frame = -2 / -2
Query: 558 LSTTVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LS 379
+ST V D + LVW F* T V G F SR+ A I S+S TW N S
Sbjct: 204 VSTFVHATXCLCDCLQTVLVW*RF*TTTNVTGGW*FGSRDAQALRIASNS*RRTW*NWPS 25
Query: 378 LTP 370
LTP
Sbjct: 24 LTP 16
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 151 bits (324), Expect = 4e-036
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2 / -2
Query: 506 FFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQ 685
FF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q
Sbjct: 661 FFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQ 482
Query: 686 EFVHSLSYVY 715
+ VHSLSYVY
Sbjct: 481 DLVHSLSYVY 452
Score = 109 bits (232), Expect = 2e-023
Identities = 54/70 (77%), Positives = 55/70 (78%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 453 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 632
Query: 534 TLSGDAV*KN 505
TLSGD KN
Sbjct: 633 TLSGDPGMKN 662
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 452 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 631
Query: 535 NIV 527
+IV
Sbjct: 632 DIV 640
Score = 67.5 bits (141), Expect = 8e-011
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / -1
Query: 520 ITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSF 699
I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+F
Sbjct: 647 IS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAF 468
Query: 700 AILRV 714
A+L V
Sbjct: 467 ALLCV 453
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 454 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 633
Query: 533 HC 528
HC
Sbjct: 634 HC 639
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -3
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 639 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 460
Query: 708 TC 713
C
Sbjct: 459 MC 454
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 111 bits (238), Expect(2) = 5e-036
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
NH+ + N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 157 NHNDQRSVDRKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 336
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 337 ADGLQTLTNNLCYTY 381
Score = 59.3 bits (123), Expect(2) = 5e-036
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 371 GVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
GVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 10 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 150
Score = 48.3 bits (99), Expect(2) = 1e-006
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA K SS RT * G +VP IPA *KS +GW STTVPG
Sbjct: 350 CKPSAVKLFSSQRTW*CAGRLVP*IPAWLQR*KSNSVGWHIFESTTVPG 204
Score = 35.0 bits (70), Expect = 0.47
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L+ ++M++ CS + SM T VE+E+ RMA I+ +R+ +
Sbjct: 324 LIPKDMVMRRAACSLNTSMATKVEIELSRMAYL*INDGTRQYV 196
Score = 23.5 bits (45), Expect(2) = 1e-006
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -2 / -2
Query: 495 WFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTP 370
W F T V G S++ A +I SSS T N SLTP
Sbjct: 134 WRFWTTTNVTGG**LGSKDAQAFLIASSSYNRT**NCPSLTP 9
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 148 bits (318), Expect = 3e-035
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +2 / -3
Query: 509 FQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQE 688
F SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+
Sbjct: 700 FMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQD 521
Query: 689 FVHSLSYVY 715
VHSLSYVY
Sbjct: 520 LVHSLSYVY 494
Score = 107 bits (229), Expect = 5e-023
Identities = 52/65 (80%), Positives = 53/65 (81%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 495 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 674
Query: 534 TLSGD 520
TLSGD
Sbjct: 675 TLSGD 689
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 494 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 673
Query: 535 NIV 527
+IV
Sbjct: 674 DIV 682
Score = 67.5 bits (141), Expect = 8e-011
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / -2
Query: 520 ITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSF 699
I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+F
Sbjct: 689 IS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAF 510
Query: 700 AILRV 714
A+L V
Sbjct: 509 ALLCV 495
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 496 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 675
Query: 533 HC 528
HC
Sbjct: 676 HC 681
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -1
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 681 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 502
Query: 708 TC 713
C
Sbjct: 501 MC 496
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 141 bits (303), Expect = 3e-033
Identities = 51/64 (79%), Positives = 59/64 (92%)
Frame = +2 / -1
Query: 524 PDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSL 703
PDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTT PTHYH+LHDEI F+AD++Q+ VHSL
Sbjct: 676 PDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSL 497
Query: 704 SYVY 715
SYVY
Sbjct: 496 SYVY 485
Score = 102 bits (217), Expect = 2e-021
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 486 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 665
Query: 534 TLS 526
TLS
Sbjct: 666 TLS 674
Score = 68.9 bits (144), Expect = 3e-011
Identities = 27/63 (42%), Positives = 46/63 (73%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ CC NH SM HV+V + MA+ I++S+R+
Sbjct: 485 VHIRERMHKILQVIRGKVYLIMQDMVMCWXCCPNHSSMSAHVKVIIPWMADSIINNSARR 664
Query: 535 NIV 527
+IV
Sbjct: 665 DIV 673
Score = 65.2 bits (136), Expect = 4e-010
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +1 / -3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
QC SW+C * LPS EL LLHV +CW+DW+NK + L A D AG C+FA+L
Sbjct: 671 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKXNTLPYPA**DTLCRG*PAGSCAFALL 492
Query: 709 RV 714
V
Sbjct: 491 CV 486
Score = 61.1 bits (127), Expect = 6e-009
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + LL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 487 THKRANAQDPAGHPRQSVSHHAGYGNVLXLLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 666
Query: 533 HC 528
HC
Sbjct: 667 HC 672
Score = 37.7 bits (76), Expect = 0.070
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = +3 / -2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQ + C R + CR L IR L
Sbjct: 672 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQXQHITISCMMRYTLPRMTCRILCIRSL 493
Query: 708 TC 713
C
Sbjct: 492 MC 487
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 141 bits (302), Expect = 5e-033
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / -1
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 707 YVY 715
YVY
Sbjct: 446 YVY 438
Score = 100 bits (213), Expect = 9e-021
Identities = 49/62 (79%), Positives = 50/62 (80%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 439 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 618
Query: 534 TL 529
TL
Sbjct: 619 TL 624
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 438 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 617
Query: 535 NIV 527
+IV
Sbjct: 618 DIV 626
Score = 67.0 bits (140), Expect = 1e-010
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +1 / -3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+FA+L
Sbjct: 624 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALL 445
Query: 709 RV 714
V
Sbjct: 444 CV 439
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 440 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 619
Query: 533 HC 528
HC
Sbjct: 620 HC 625
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 625 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 446
Query: 708 TC 713
C
Sbjct: 445 MC 440
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 141 bits (302), Expect = 5e-033
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / -1
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLS
Sbjct: 674 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 495
Query: 707 YVY 715
YVY
Sbjct: 494 YVY 486
Score = 100 bits (213), Expect = 9e-021
Identities = 49/62 (79%), Positives = 50/62 (80%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 487 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 666
Query: 534 TL 529
TL
Sbjct: 667 TL 672
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 486 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 665
Query: 535 NIV 527
+IV
Sbjct: 666 DIV 674
Score = 67.0 bits (140), Expect = 1e-010
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +1 / -3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+FA+L
Sbjct: 672 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALL 493
Query: 709 RV 714
V
Sbjct: 492 CV 487
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 488 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 667
Query: 533 HC 528
HC
Sbjct: 668 HC 673
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 673 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 494
Query: 708 TC 713
C
Sbjct: 493 MC 488
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 141 bits (302), Expect = 5e-033
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / -1
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 707 YVY 715
YVY
Sbjct: 446 YVY 438
Score = 100 bits (213), Expect = 9e-021
Identities = 49/62 (79%), Positives = 50/62 (80%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 439 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGG 618
Query: 534 TL 529
TL
Sbjct: 619 TL 624
Score = 73.0 bits (153), Expect = 2e-012
Identities = 28/63 (44%), Positives = 47/63 (74%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R+
Sbjct: 438 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARR 617
Query: 535 NIV 527
+IV
Sbjct: 618 DIV 626
Score = 67.0 bits (140), Expect = 1e-010
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +1 / -3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+FA+L
Sbjct: 624 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALL 445
Query: 709 RV 714
V
Sbjct: 444 CV 439
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 440 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEG 619
Query: 533 HC 528
HC
Sbjct: 620 HC 625
Score = 40.9 bits (83), Expect = 0.008
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +3 / -2
Query: 528 TMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYL 707
TM L L I+ AI T TC ML *L QQG + C R + CR L IR L
Sbjct: 625 TMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSL 446
Query: 708 TC 713
C
Sbjct: 445 MC 440
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 106 bits (227), Expect(2) = 2e-032
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV+PGTVVD ++CHP FDF++C+HAG+ GT+RP HYHVL D+ FSAD++Q ++L Y
Sbjct: 278 NVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADDLQSLTNNLCY 457
Query: 710 VY 715
Y
Sbjct: 458 TY 463
Score = 54.7 bits (113), Expect(2) = 1e-009
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
C SSA K +SS T * G +VP+IPA KS +GWQ LSTTVPG T
Sbjct: 432 CRSSALKLLSSRSTW*CAGRLVPLIPAWLQRKKSNSVGWQICLSTTVPGIT 280
Score = 52.4 bits (108), Expect(2) = 2e-032
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2 / +2
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTV 475
I + L+ + K KP+ +I +RDGVSE QF V+ E+ +I +A K L P +
Sbjct: 32 IAKKLLLSFEQHSKHKPQQLIFYRDGVSEGQFRMVLENEIPEIEKAWKALYNVKPPITFI 211
Query: 476 IVAQKNHHTKF 508
+V +++H F
Sbjct: 212 VVQKRHHTRLF 244
Score = 39.1 bits (79), Expect = 0.027
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -1 / -3
Query: 691 KLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
K L ++ E ++ Q++++ CS PSM T E+++ +A+ I+H + NI
Sbjct: 439 KRLQVISTEVVVISQHVVMRRTACSLDPSMATEEEIKLCWVADLPINHCAWHNI 278
Score = 27.6 bits (54), Expect(2) = 1e-009
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = -2 / -1
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
N + W T +G HA I S T +N* SLTPSL I C G
Sbjct: 243 NSLVWCLFCTTMKVIGGFTLYNAFHAFSISGISFSKTILN*PSLTPSL*NISCWG 79
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 135 bits (289), Expect = 3e-031
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +2 / -2
Query: 539 PGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 652 PGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVY 476
Score = 97.3 bits (206), Expect = 8e-020
Identities = 47/59 (79%), Positives = 48/59 (81%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG
Sbjct: 477 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPG 653
Score = 68.0 bits (142), Expect = 5e-011
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSR 539
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+ I++S+R
Sbjct: 476 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSAR 652
Score = 61.1 bits (127), Expect = 6e-009
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = +1 / -1
Query: 538 SWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
SW+C * LPS EL LLHV +CW+DW+NKA+ L A D AG C+FA+L V
Sbjct: 653 SWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCV 477
Score = 53.8 bits (111), Expect = 1e-006
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
T K AN Q PA ++++S A + + ALL QS QH TC+S +S DG+ +Y Q Q
Sbjct: 478 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQ 651
Score = 37.3 bits (75), Expect = 0.095
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +3 / -3
Query: 540 LELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
L L I+ AI T TC ML *L QQG + C R + CR L IR L C
Sbjct: 651 LALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSLMC 478
>gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013I03f, mRNA sequence
Length = 751
Score = 79.0 bits (166), Expect(3) = 5e-031
Identities = 37/106 (34%), Positives = 55/106 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 326 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 505
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDN 532
QV+ ELD I +AC L+ + P T +V QK HHT+ F D+
Sbjct: 506 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDH 643
Score = 68.0 bits (142), Expect(3) = 5e-031
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + IP VS PTII G DV+H HPG+D A V
Sbjct: 98 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 277
Query: 182 SRQ 190
+ Q
Sbjct: 278 ASQ 286
Score = 47.3 bits (97), Expect(2) = 6e-012
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK G + +I S K
Sbjct: 257 PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 436
Query: 338 R 340
R
Sbjct: 437 R 439
Score = 44.6 bits (91), Expect(2) = 6e-012
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNF 583
N+H N+LPGTVVDSK+CHP F
Sbjct: 626 NNHNDHRTVDRSGNILPGTVVDSKICHPNRF 718
Score = 41.4 bits (84), Expect(4) = 2e-013
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* C TS P ++VG T GI ++ S F PP+ LI + +RY
Sbjct: 249 SSPG*GCVTSAPNIIVGLSLTRGILLVKASTSTVFLPPTLTLILRATFARY 97
Score = 30.4 bits (60), Expect(4) = 2e-013
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2 / -2
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL G E TTAA EGL
Sbjct: 366 LKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGL 253
Score = 29.5 bits (58), Expect(4) = 2e-013
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
K+LV F T V G S++ HA ++ SSS T N SLTPSL ++ GF
Sbjct: 621 KSLV*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGF 451
Score = 27.2 bits (53), Expect(4) = 2e-013
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 576 LGWQTLLSTTVPG 538
LGWQ STTVPG
Sbjct: 711 LGWQIFESTTVPG 673
Score = 25.4 bits (49), Expect(3) = 5e-031
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 572 PKNFDFYMCAHA 607
P +F FY+C+HA
Sbjct: 708 PTDFGFYLCSHA 743
>gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017E11f, mRNA sequence
Length = 689
Score = 79.0 bits (166), Expect(2) = 3e-027
Identities = 36/99 (36%), Positives = 53/99 (53%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 370 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 549
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 550 QVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 666
Score = 62.5 bits (130), Expect(2) = 3e-027
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + I V+ PTII G DV+H HPG+D A V
Sbjct: 142 YLANVALKINVKVGGRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVV 321
Query: 182 SRQ 190
+ Q
Sbjct: 322 ASQ 330
Score = 47.8 bits (98), Expect = 6e-005
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G + +I S K
Sbjct: 301 PSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 480
Query: 338 R 340
R
Sbjct: 481 R 483
Score = 40.5 bits (82), Expect(3) = 9e-014
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* C TS P +MVG T I ++ S F PP+ LI + +RY
Sbjct: 293 SSPG*GCVTSAPNIMVGRSVTRRILLAKASTSTVFLPPTLTLILRATFARY 141
Score = 40.0 bits (81), Expect(3) = 9e-014
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
K+LVW F T V G F S++ A ++ SSS TW N SLTPSL ++ GF
Sbjct: 665 KSLVW*RFWTTTKVTGG**FGSKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GF 495
Score = 32.7 bits (65), Expect(3) = 9e-014
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL I G E TTAA EGL
Sbjct: 410 LKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGL 297
Score = 31.3 bits (62), Expect = 5.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
LG H* + RP+ R+NH CN R+
Sbjct: 375 LGTH*SCVLSYLRPVLRSNHSCNGRA 298
>gb|BQ464032.1|BQ464032 HF01C16T HF Hordeum vulgare subsp. vulgare cDNA clone HF01C16
5-PRIME, mRNA sequence
Length = 663
Score = 95.5 bits (202), Expect(2) = 1e-026
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL NLL+KINAKLGGLN+LLQ+EA+ +IP V +VPTIILGMDVSHG PGQ A V
Sbjct: 392 YLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVSHGQPGQSDRPSIAAVV 571
Query: 182 S 184
S
Sbjct: 572 S 574
Score = 78.5 bits (165), Expect(2) = 2e-023
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
DRPS+AAVVSSR+WPLIS+YRA+VHTQS + EMM+SLFK
Sbjct: 545 DRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFK 661
Score = 70.7 bits (148), Expect(2) = 5e-027
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG*PC+TS+P+M+VGT T GI AS SN RPPS A I SKL +Y
Sbjct: 540 CPG*PCDTSMPRMIVGTFPTMGIARAASI*SNVLRPPSLAFILSSKLLKY 391
Score = 70.3 bits (147), Expect(2) = 5e-027
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLNNE IIS L D VCT ALYLE+RGH RELTTAA EGLS
Sbjct: 663 GLNNEAIISCLGD*VCTVALYLEMRGHSRELTTAAMEGLS 544
Score = 56.5 bits (117), Expect(2) = 2e-016
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 265 KQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
KQ GHH G L VH CS+ RD+RPLTRT+HR N R +
Sbjct: 658 KQ*GHHLLFG*LSVHCCSVFRDERPLTRTHHRSNGRPV 545
Score = 50.1 bits (103), Expect(2) = 2e-023
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1 / +1
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
*FA +D+C AWW + +A++ S NT C ++H +GC TW
Sbjct: 400 *FATQDKC*AWWPQHIASNRSSPCNTHCGEGAYYHPGHGCVTW 528
Score = 48.7 bits (100), Expect(2) = 2e-016
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -3
Query: 142 MTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
+TM*+IH DD +L H Y CF+L+Q V+ TKL I L QI QV
Sbjct: 532 LTM*HIHAQDDSRHLPHNGYCTGCFDLKQCVEATKLSIYLE*QITQV 392
Score = 44.1 bits (90), Expect(2) = 1e-026
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 159 LRLQRWLVLVNGLLSLDIEHQCTPNLPD*K*CPRCLS 269
L L RW VLV+GL SL+ E QCT + P+ +* P CL+
Sbjct: 552 LPLLRW*VLVSGLSSLNTEQQCTLSHPNRR*WPHCLN 662
Score = 40.5 bits (82), Expect = 0.010
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -3 / -2
Query: 266 *TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPK 159
*T R S VW CAL+L I*R*EA EN PP Q K
Sbjct: 659 *TMRPSSPVWVTECALLLCI*R*EATHENSPPQQWK 552
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3 / +3
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMV 140
T +IC R M SLV T C K K QY + + SS WM HMV
Sbjct: 393 T*VICYSR*MLSLVASTHCFKSKQPVQYPLWGRCLLSSWAWMCHMV 530
Score = 29.5 bits (58), Expect(2) = 2e-004
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / +1
Query: 190 MASYL*I*SISAHPICQTRNDVLVV* 267
+AS+L*I S SAH + QT +D L+V*
Sbjct: 583 VASHL*IQSNSAHSVTQTGDDGLIV* 660
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 113 bits (241), Expect(2) = 2e-026
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 49 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 671 ADEMQEFVHSLSYVY 715
ADE+Q ++L Y Y
Sbjct: 229 ADELQTLTNNLCYTY 273
Score = 61.1 bits (127), Expect = 6e-009
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT**W G +VP +PA H *KS +GWQ STTVPG
Sbjct: 242 CNSSAVNLFSSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 96
Score = 54.2 bits (112), Expect = 8e-007
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + LV +NMIVG P CS + SM T VE+E RMA+ I++ +R+ +
Sbjct: 243 LQLISSKFVLVPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYV 88
Score = 40.5 bits (82), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLC 672
LPS +R L V CW N A PLSCS R++ C
Sbjct: 123 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC 230
Score = 40.5 bits (82), Expect = 0.010
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +3 / +2
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCR 686
I + AI + S STCV ML EQ G PTIMF TR L C+
Sbjct: 113 IRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCK 244
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 659 SRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
SR EHDSG A LF QH +T R+R DG+
Sbjct: 217 SRPREHDSGQAGLFPECQHGYTSRNRILSDGR 122
Score = 25.8 bits (50), Expect(2) = 2e-026
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 470 TVIVAQKNHHTKFF 511
T +V QK HHT+ F
Sbjct: 4 TFVVVQKRHHTRLF 45
>gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091D21f, mRNA sequence
Length = 914
Score = 81.3 bits (171), Expect(3) = 3e-025
Identities = 37/99 (37%), Positives = 53/99 (53%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 103 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 282
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ ELD I +AC L+ + P T +V QK HHTK F
Sbjct: 283 QVLRYELDAIRKACASLEPNYQPPVTFVVVQKRHHTKLF 399
Score = 47.8 bits (98), Expect(3) = 3e-025
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHA 607
N+LPGT SK+ HP FDFY+C+HA
Sbjct: 442 NILPGTGGGSKIWHPNEFDFYLCSHA 519
Score = 47.3 bits (97), Expect = 9e-005
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK G + +I S K
Sbjct: 34 PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 213
Query: 338 R 340
R
Sbjct: 214 R 216
Score = 35.4 bits (71), Expect(2) = 6e-005
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -1 / -3
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIP 365
K+LGV+ LL N S G + +Q TCL + I+ +L +L D+IP
Sbjct: 399 KKLGVMPLLDNYKSNWGLVIGLQGRTCLSNGIKFIPKNLIELALADTIP 253
Score = 30.4 bits (60), Expect(2) = 6e-005
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL G E TTAA EGL
Sbjct: 143 LKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGL 30
Score = 29.5 bits (58), Expect(2) = 0.068
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
K+LV F T V G S++ HA ++ SSS T N SLTPSL ++ GF
Sbjct: 398 KSLV*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGF 228
Score = 25.8 bits (50), Expect(2) = 0.068
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1 / -3
Query: 274 PRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRS 155
P K+ + F LG +* I D RP+ +NH N R+
Sbjct: 150 PYFKKILYQFLPMGLGAN*SCILSDLRPVLGSNHSSNGRT 31
Score = 23.5 bits (45), Expect(3) = 3e-025
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2 / +1
Query: 128 VSHGHPGQDRPSVAAVVSSRQ 190
V+H HPG+D A V + Q
Sbjct: 1 VTHPHPGEDSSPSIAAVVASQ 63
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 112 bits (239), Expect = 2e-024
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +2 / -3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 559 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 380
Query: 710 VY 715
Y
Sbjct: 379 TY 374
Score = 61.1 bits (127), Expect = 6e-009
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / +3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT**W G +VP +PA H *KS +GWQ STTVPG
Sbjct: 405 CNSSAVNLFSSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 551
Score = 54.2 bits (112), Expect = 8e-007
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + LV +NMIVG P CS + SM T VE+E RMA+ I++ +R+ +
Sbjct: 404 LQLISSKFVLVPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYV 559
Score = 40.5 bits (82), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -2
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLC 672
LPS +R L V CW N A PLSCS R++ C
Sbjct: 524 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC 417
Score = 40.5 bits (82), Expect = 0.010
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +3 / -1
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCR 686
I + AI + S STCV ML EQ G PTIMF TR L C+
Sbjct: 534 IRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCK 403
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / +1
Query: 659 SRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
SR EHDSG A LF QH +T R+R DG+
Sbjct: 430 SRPREHDSGQAGLFPECQHGYTSRNRILSDGR 525
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 112 bits (239), Expect = 2e-024
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +2 / -2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 608 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 429
Query: 710 VY 715
Y
Sbjct: 428 TY 423
Score = 61.1 bits (127), Expect = 6e-009
Identities = 29/49 (59%), Positives = 32/49 (65%)
Frame = -2 / +1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT**W G +VP +PA H *KS +GWQ STTVPG
Sbjct: 454 CNSSAVNLFSSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 600
Score = 54.2 bits (112), Expect = 8e-007
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -1 / +3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + LV +NMIVG P CS + SM T VE+E RMA+ I++ +R+ +
Sbjct: 453 LQLISSKFVLVPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYV 608
Score = 40.5 bits (82), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -1
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLC 672
LPS +R L V CW N A PLSCS R++ C
Sbjct: 573 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC 466
Score = 40.5 bits (82), Expect = 0.010
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +3 / -3
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCR 686
I + AI + S STCV ML EQ G PTIMF TR L C+
Sbjct: 583 IRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCK 452
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / +2
Query: 659 SRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
SR EHDSG A LF QH +T R+R DG+
Sbjct: 479 SRPREHDSGQAGLFPECQHGYTSRNRILSDGR 574
>gb|BU986804.1|BU986804 HF12P08r HF Hordeum vulgare subsp. vulgare cDNA clone HF12P08
5-PRIME, mRNA sequence
Length = 503
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KINAKLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG P Q
Sbjct: 291 YLTNVLLKINAKLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPRQ 440
Score = 71.2 bits (149), Expect(2) = 6e-016
Identities = 32/50 (64%), Positives = 34/50 (68%)
Frame = -2 / -2
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
C G P +TSIPKM VGT DT GI D S CS+EF PPSFALIF RY
Sbjct: 439 CRGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSFALIFSKTFVRY 290
Score = 54.2 bits (112), Expect = 8e-007
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
EDQCK WW+EL A +*++ T+C+ + HL GC W
Sbjct: 311 EDQCKTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 427
Score = 40.5 bits (82), Expect(2) = 2e-024
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRY 211
D PS+AAVV SR+WPL+S+Y
Sbjct: 444 DIPSIAAVVGSREWPLVSKY 503
Score = 37.3 bits (75), Expect(2) = 2e-004
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LS +M +IH+ D+ L + Y FNL Q V +TK CIDL Q I Q+
Sbjct: 440 LSRGSMGHIHSQDESWDL*YKRYTWGHFNL*Q*VHSTKFCIDLQQNICQI 291
Score = 33.6 bits (67), Expect = 1.2
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
*RSMQ+LV *T C KLK + Y + ++ SS WM M
Sbjct: 310 *RSMQNLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 426
Score = 32.2 bits (64), Expect(2) = 6e-016
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 210 YLEIRGH*RELTTAATEGLS 151
Y E RGH RE TTAA +G+S
Sbjct: 502 YFETRGHSREPTTAAMDGIS 443
Score = 26.7 bits (52), Expect(2) = 2e-004
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -1
Query: 211 ISRDKRPLTRTNHRCN 164
I RDK P RTN+ CN
Sbjct: 503 IFRDKGPFARTNNCCN 456
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 109 bits (233), Expect = 2e-023
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = +2 / -3
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 600 ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYT 421
Query: 713 Y 715
Y
Sbjct: 420 Y 418
Score = 51.5 bits (106), Expect = 5e-006
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / +2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS T** G +VP +PA H *KS +GWQ STTVPG
Sbjct: 449 CNSSAVNLFSSHST***AGRLVP*MPAWLHK*KSNSVGWQIFESTTVPG 595
Score = 38.6 bits (78), Expect = 0.037
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -1 / +1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ E L+ +I+ CS + S+ T VE+++ RMAN I++S+R+ +
Sbjct: 448 LQLISSELVLIP*YVIMSRTACSLNASVATQVEIKLGRMANL*INNSARQYV 603
>gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M23
5-PRIME, mRNA sequence
Length = 581
Score = 107 bits (229), Expect = 5e-023
Identities = 38/47 (80%), Positives = 45/47 (95%)
Frame = +2 / -1
Query: 575 KNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 581 RNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVY 441
Score = 67.5 bits (141), Expect = 8e-011
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKF 577
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS F
Sbjct: 442 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*F 579
Score = 60.2 bits (125), Expect = 1e-008
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEV 584
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV+V
Sbjct: 441 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKV 572
Score = 49.6 bits (102), Expect = 2e-005
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1 / -3
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
EL LLHV +CW+DW+NKA+ L A D AG C+FA+L V
Sbjct: 579 EL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCV 442
Score = 43.2 bits (88), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS 576
T K AN Q PA ++++S A + + ALL QS QH TC+S +S
Sbjct: 443 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNS 580
Score = 34.5 bits (69), Expect = 0.64
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3 / -2
Query: 585 TSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
T TC ML *L QQG + C R + CR L IR L C
Sbjct: 571 TFTCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSLMC 443
>gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
5-PRIME, mRNA sequence
Length = 621
Score = 68.0 bits (142), Expect(2) = 4e-022
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + IP VS PTII G DV+H HPG+D A V
Sbjct: 143 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV 322
Query: 182 SRQ 190
+ Q
Sbjct: 323 ASQ 331
Score = 56.5 bits (117), Expect(2) = 4e-022
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 371 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 550
Query: 395 QVINIELDQIIEACKFLDEKWSP 463
QV+ ELD I +AC L+ + P
Sbjct: 551 QVLLYELDAIRKACASLEPNYQP 619
Score = 47.3 bits (97), Expect = 9e-005
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK G + +I S K
Sbjct: 302 PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 481
Query: 338 R 340
R
Sbjct: 482 R 484
Score = 41.4 bits (84), Expect(3) = 3e-009
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* C TS P ++VG T GI ++ S F PP+ LI + +RY
Sbjct: 294 SSPG*GCVTSAPNIIVGLSLTRGILLVKASTSTVFLPPTLTLILRATFARY 142
Score = 30.4 bits (60), Expect(3) = 3e-009
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL G E TTAA EGL
Sbjct: 411 LKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGL 298
Score = 25.8 bits (50), Expect(3) = 3e-009
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2 / -1
Query: 447 SRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
S++ HA ++ SSS T N SLTPSL ++ GF
Sbjct: 603 SKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGF 496
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 66.6 bits (139), Expect(2) = 2e-021
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +2 / -1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIG 619
N+LPGTVVDSK+CHP FDFY+C+HAG+ G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
Score = 55.1 bits (114), Expect(2) = 2e-021
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GT+RP HYHVL DE FSADEMQ ++L Y Y
Sbjct: 501 GTSRPAHYHVLWDENNFSADEMQTLTNNLCYTY 403
Score = 33.6 bits (67), Expect(2) = 3e-005
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 618 PIIPACAHM*KSKFLGWQTLLSTTVPGR 535
P IPA *KS +GW STTVPG+
Sbjct: 501 PGIPA*LQR*KSNSVGWHIFESTTVPGK 584
Score = 33.1 bits (66), Expect(2) = 3e-005
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 690 NSCISSAEKPISSCRT**WVGLVVP 616
N CISSAEK SS RT * GL+VP
Sbjct: 428 NVCISSAEKLFSSQRTW**AGLLVP 502
>gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19h01 3', mRNA sequence
Length = 607
Score = 97.3 bits (206), Expect = 8e-020
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = +2 / -1
Query: 590 YMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
YMCAHAGMIGTTRPTHYH+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 607 YMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVY 482
Score = 62.0 bits (129), Expect = 3e-009
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM 592
YT*+SE T SC SSA K ISSCR * VGLVVPIIPA AHM
Sbjct: 483 YT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM 605
Score = 57.9 bits (120), Expect = 6e-008
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHV 590
VH+R RM+K+L ++ + YL++Q+M++ PCC NH SM HV
Sbjct: 482 VHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHV 607
Score = 43.7 bits (89), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1 / -3
Query: 592 HVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
HV +CW+DW+NKA+ L A D AG C+FA+L V
Sbjct: 605 HVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCV 483
Score = 38.2 bits (77), Expect = 0.051
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTC 591
T K AN Q PA ++++S A + + ALL QS QH TC
Sbjct: 484 THKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTC 606
Score = 33.1 bits (66), Expect = 1.7
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3 / -2
Query: 591 TCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
TC ML *L QQG + C R + CR L IR L C
Sbjct: 606 TCALMLE*LGQQGQHITISCMMRYTLPRMTCRILCIRSLMC 484
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 96.8 bits (205), Expect = 1e-019
Identities = 33/62 (53%), Positives = 50/62 (80%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NVLPGTVVD+++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ +D++Q V++L +
Sbjct: 11 NVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCF 190
Query: 710 VY 715
V+
Sbjct: 191 VF 196
Score = 53.8 bits (111), Expect = 1e-006
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = -2 / -1
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
T+ C SS P SS R ** VG +VPI P H *KS G L+STTVPG TL
Sbjct: 174 TSLCRSSDP*PCSSIRL**CVGRLVPISPLWLHR*KSYVTGSTILVSTTVPGSTL 10
>gb|AV916500.1|AV916500 AV916500 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 5', mRNA sequence
Length = 615
Score = 95.0 bits (201), Expect = 4e-019
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
YL N+L+KINAKLGG+NSLLQ+E S SIP VS+VPT+ILGMDVSHG PGQ
Sbjct: 435 YLTNVLLKINAKLGGMNSLLQIEMSPSIPLVSKVPTLILGMDVSHGSPGQ 584
Score = 75.3 bits (158), Expect = 3e-013
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -3
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIPKM VGT DT GI D S CS+EF PPSFALIF RY
Sbjct: 583 CPGDPWDTSIPKMRVGTFDTRGILGDISICSSEFIPPSFALIFSKTFVRY 434
Score = 54.2 bits (112), Expect = 8e-007
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
EDQCK WW+EL A +*++ T+C+ + HL GC W
Sbjct: 455 EDQCKTWWNELTATN*NVPKYTSCIKGPNSHLGNGCVPW 571
Score = 37.3 bits (75), Expect = 0.095
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LS +M +IH+ D+ L + Y FNL Q V +TK CIDL Q I Q+
Sbjct: 584 LSRGSMGHIHSQDESWDL*YKRYTWGHFNL*Q*VHSTKFCIDLQQNICQI 435
Score = 33.6 bits (67), Expect = 1.2
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHM 137
*RSMQ+LV *T C KLK + Y + ++ SS WM M
Sbjct: 454 *RSMQNLVE*THCYKLKCPQVYLLYQRSQLSSWEWMCPM 570
>gb|BU978254.1|BU978254 HA12N07r HA Hordeum vulgare subsp. vulgare cDNA clone HA12N07
5-PRIME, mRNA sequence
Length = 493
Score = 62.5 bits (130), Expect(2) = 3e-017
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + I V+ PTII G DV+H HPG+D A V
Sbjct: 59 YLANVALKINVKVGGRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVV 238
Query: 182 SRQ 190
+ Q
Sbjct: 239 ASQ 247
Score = 47.8 bits (98), Expect = 6e-005
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G + +I S K
Sbjct: 218 PSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 397
Query: 338 R 340
R
Sbjct: 398 R 400
Score = 45.5 bits (93), Expect(2) = 3e-017
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 287 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 466
Query: 395 QVINIELD 418
QV+ ELD
Sbjct: 467 QVLLFELD 490
Score = 40.5 bits (82), Expect(3) = 3e-009
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* C TS P +MVG T I ++ S F PP+ LI + +RY
Sbjct: 210 SSPG*GCVTSAPNIMVGRSVTRRILLAKASTSTVFLPPTLTLILRATFARY 58
Score = 32.7 bits (65), Expect(3) = 3e-009
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL I G E TTAA EGL
Sbjct: 327 LKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGL 214
Score = 31.3 bits (62), Expect = 5.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
LG H* + RP+ R+NH CN R+
Sbjct: 292 LGTH*SCVLSYLRPVLRSNHSCNGRA 215
Score = 24.4 bits (47), Expect(3) = 3e-009
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2 / -2
Query: 417 SSSMLMTWVN*LSLTPSLKIIMCSGF 340
SSS TW N SLTPSL ++ GF
Sbjct: 489 SSSNNRTW*NCPSLTPSL*NMIL*GF 412
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 86.3 bits (182), Expect = 2e-016
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +2 / -3
Query: 566 CHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y Y
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTY 522
Score = 48.7 bits (100), Expect = 3e-005
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -2 / +1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQ 565
C SSA SS RT**W G +VP +PA H *KS +GWQ
Sbjct: 553 CNSSAVNLFSSQRT**WAGRLVP*MPAWLHK*KSNSVGWQ 672
Score = 47.8 bits (98), Expect = 6e-005
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -1 / +3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMA 566
L L+ + LV +NMIVG P CS + SM T VE+E RMA
Sbjct: 552 LQLISSKFVLVPENMIVGRPACSLNASMATQVEIEFCRMA 671
Score = 40.5 bits (82), Expect = 0.010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -2
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLC 672
LPS +R L V CW N A PLSCS R++ C
Sbjct: 672 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC 565
Score = 40.0 bits (81), Expect = 0.014
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 567 AILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCR 686
AI + S STCV ML EQ G PTIMF TR L C+
Sbjct: 670 AIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCK 551
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / +2
Query: 659 SRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
SR EHDSG A LF QH +T R+R DG+
Sbjct: 578 SRPREHDSGQAGLFPECQHGYTSRNRILSDGR 673
>gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09O13
3-PRIME, mRNA sequence
Length = 544
Score = 84.5 bits (178), Expect = 6e-016
Identities = 28/57 (49%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 545 TVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
TVVD+++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ +D++Q V++L +V+
Sbjct: 543 TVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCFVF 373
Score = 44.1 bits (90), Expect = 8e-004
Identities = 26/50 (52%), Positives = 29/50 (58%)
Frame = -2 / +2
Query: 693 TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTV 544
T+ C SS P SS R ** VG +VPI P H *KS G L+STTV
Sbjct: 395 TSLCRSSDP*PCSSIRL**CVGRLVPISPLWLHR*KSYVTGSTILVSTTV 544
>gb|BG414215.1|BG414215 HVSMEk0001E02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001E02f, mRNA sequence
Length = 563
Score = 62.5 bits (130), Expect(2) = 1e-015
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + I V+ PTII G DV+H HPG+D A V
Sbjct: 141 YLANVALKINVKVGGRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVV 320
Query: 182 SRQ 190
+ Q
Sbjct: 321 ASQ 329
Score = 47.8 bits (98), Expect = 6e-005
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G + +I S K
Sbjct: 300 PSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 479
Query: 338 R 340
R
Sbjct: 480 R 482
Score = 40.5 bits (82), Expect(3) = 7e-008
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG* C TS P +MVG T I ++ S F PP+ LI + +RY
Sbjct: 292 SSPG*GCVTSAPNIMVGRSVTRRILLAKASTSTVFLPPTLTLILRATFARY 140
Score = 40.0 bits (81), Expect(2) = 1e-015
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 369 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 548
Query: 395 QVI 403
QV+
Sbjct: 549 QVL 557
Score = 32.7 bits (65), Expect(3) = 7e-008
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2 / -2
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL I G E TTAA EGL
Sbjct: 409 LKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGL 296
Score = 31.3 bits (62), Expect = 5.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
LG H* + RP+ R+NH CN R+
Sbjct: 374 LGTH*SCVLSYLRPVLRSNHSCNGRA 297
Score = 21.7 bits (41), Expect(3) = 7e-008
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 399 TWVN*LSLTPSLKIIMCSGF 340
TW N SLTPSL ++ GF
Sbjct: 553 TW*NCPSLTPSL*NMIL*GF 494
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 83.1 bits (175), Expect = 2e-015
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2 / +1
Query: 572 PKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
P FDFY+C+HAG+ GT+RPTHYHVL DE GF+AD +Q+ ++L Y Y
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTY 156
Score = 43.2 bits (88), Expect = 0.002
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLG 571
C SA KP SS RT * VGL+VP IPA H *KS +G
Sbjct: 125 CSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVG 12
>gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB32L19
5-PRIME, mRNA sequence
Length = 456
Score = 58.3 bits (121), Expect(2) = 6e-015
Identities = 29/86 (33%), Positives = 44/86 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVSE QF
Sbjct: 197 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFY 376
Query: 395 QVINIELDQIIEACKFLDEKWSPKFT 472
QV+ ELD I +AC L+ + P T
Sbjct: 377 QVLLFELDAIRKACASLEPNYQPPVT 454
Score = 47.8 bits (98), Expect = 6e-005
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP I++Y V Q+ R E++ LFK G + +I S K
Sbjct: 128 PSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 307
Query: 338 R 340
R
Sbjct: 308 R 310
Score = 41.8 bits (85), Expect(2) = 6e-015
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2 / +2
Query: 44 GLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
G N++L + I V+ PTII G DV+H HPG+D A V + Q
Sbjct: 11 GRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQ 157
Score = 32.7 bits (65), Expect(3) = 1e-007
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2 / -1
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
L I S L W T+ YL I G E TTAA EGL
Sbjct: 237 LKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGL 124
Score = 31.3 bits (62), Expect = 5.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
LG H* + RP+ R+NH CN R+
Sbjct: 202 LGTH*SCVLSYLRPVLRSNHSCNGRA 125
Score = 30.4 bits (60), Expect(3) = 1e-007
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 453 FSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
F S++ A ++ SSS TW N SLTPSL ++ GF
Sbjct: 435 FGSKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GF 322
Score = 28.6 bits (56), Expect(3) = 1e-007
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRP 43
S PG* C TS P +MVG T I ++ S F P
Sbjct: 120 SSPG*GCVTSAPNIMVGRSVTRRILLAKASTSTVFLP 10
>gb|BU984351.1|BU984351 HF03L02r HF Hordeum vulgare subsp. vulgare cDNA clone HF03L02
5-PRIME, mRNA sequence
Length = 527
Score = 79.9 bits (168), Expect = 1e-014
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVS 133
YL NLL+KINAKLGGLN+LLQ+EA+ +IP V +VPTIILGMDVS
Sbjct: 395 YLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVS 526
Score = 52.8 bits (109), Expect = 2e-006
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2 / -3
Query: 132 ETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
+TS+P+M+VGT T GI AS SN RPPS A I SKL +Y
Sbjct: 525 DTSMPRMIVGTFPTMGIARAASI*SNVLRPPSLAFILSSKLLKY 394
Score = 43.2 bits (88), Expect = 0.002
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1 / +1
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGC 129
*FA +D+C AWW + +A++ S NT C ++H +GC
Sbjct: 403 *FATQDKC*AWWPQHIASNRSSPCNTHCGEGAYYHPGHGC 522
Score = 43.2 bits (88), Expect = 0.002
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = -1 / -2
Query: 133 *NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
*+IH DD +L H Y CF+L+Q V+ TKL I L QI QV
Sbjct: 526 *HIHAQDDSRHLPHNGYCTGCFDLKQCVEATKLSIYLE*QITQV 395
Score = 30.9 bits (61), Expect = 8.1
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +3 / +3
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFH 134
T +IC R M SLV T C K K QY + + SS WM H
Sbjct: 396 T*VICYSR*MLSLVASTHCFKSKQPVQYPLWGRCLLSSWAWMCH 527
>emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragment; clone MWG2264
Length = 447
Score = 41.8 bits (85), Expect(3) = 1e-011
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFY 592
GTVVDSK+CHP FDFY
Sbjct: 395 GTVVDSKICHPTQFDFY 445
Score = 38.2 bits (77), Expect(3) = 1e-011
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 419 QIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+ +AC L+ + P T ++ QK HHTK F
Sbjct: 133 EYFQACASLEPNYQPPVTFVIVQKRHHTKLF 225
Score = 27.2 bits (53), Expect(3) = 1e-011
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 368 DGVSESQFTQVINIELDQI 424
DGVS QF QV+ ELD I
Sbjct: 2 DGVSAGQFHQVLLYELDAI 58
>gb|BG418771.1|BG418771 HVSMEk0024G02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024G02f, mRNA sequence
Length = 895
Score = 64.8 bits (135), Expect = 5e-010
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +2 / +3
Query: 11 NLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
N+ +KIN K+GG N++L S IP V+ PTII G DV+H HPG+D A V + Q
Sbjct: 537 NIALKINVKVGGRNTVLVDALSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQ 716
Query: 191 WPLISRYRASVHTQSAR 241
R V Q+ R
Sbjct: 717 IGPSYEVRGLVSAQAHR 767
Score = 41.8 bits (85), Expect = 0.004
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIF 22
T A LS PG* TS P M+VG T GI D ++ S F PP+ IF
Sbjct: 703 TAAIDGLLSSPG*GWVTSAPNMIVGLSVTRGIRLDNASTSTVFLPPTLTFIF 548
>gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9a21 3', mRNA sequence
Length = 587
Score = 63.8 bits (133), Expect = 1e-009
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +2 / -1
Query: 629 PTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PTHYH+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 587 PTHYHILHDEIHFAADDLQDLVHSLSYVY 501
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCR 646
YT*+SE T SC SSA K ISSCR
Sbjct: 502 YT*ESECTRSCRSSAAKCISSCR 570
Score = 34.1 bits (68), Expect = 0.88
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIV 635
VH+R RM+K+L ++ + YL++Q+M++
Sbjct: 501 VHIRERMHKILQVIRGKVYLIMQDMVM 581
>gb|BG366122.2|BG366122 HVSMEi0005O01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005O01f, mRNA sequence
Length = 619
Score = 62.9 bits (131), Expect = 2e-009
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +2 / +3
Query: 11 NLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
N+ +KIN K+GG N++L S IP V+ PTIILG DV+H +PG+D+ A V Q
Sbjct: 285 NIALKINVKVGGRNTVLVDAWSRRIPLVTDRPTIILGADVTHPNPGEDKSPSIAAVGPSQ 464
>gb|BQ663779.1|BQ663779 HU04A08u HU Hordeum vulgare subsp. vulgare cDNA clone HU04A08
3-PRIME, mRNA sequence
Length = 526
Score = 59.3 bits (123), Expect = 2e-008
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +2 / -1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHP 145
YL N+ +KIN K+GG N++L S+ IP V PTII G DV+H HP
Sbjct: 433 YLANVALKINVKVGGRNTVLVDALSTRIPLVRDRPTIIFGADVTHPHP 290
Score = 38.2 bits (77), Expect = 0.051
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -2 / +3
Query: 144 G*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
G* TS P +MVG T GI D ++ S F PP+ LI + +RY
Sbjct: 291 G*GWVTSAPNIMVGLSLTRGILVDKASTSTVFLPPTLTLILRATFARY 434
>gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
3-PRIME, mRNA sequence
Length = 603
Score = 59.3 bits (123), Expect = 2e-008
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2 / -3
Query: 599 AHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y Y
Sbjct: 601 SHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTY 485
>emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragment; clone MWG0876.uni
Length = 486
Score = 46.4 bits (95), Expect(2) = 3e-008
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 521 SPDNVLPGTVVDSKVCHPKNFDFYMCAH 604
S N+ PGTVVD+ + H + FDFY+C+H
Sbjct: 441 SDQNIPPGTVVDTVITHXREFDFYLCSH 358
Score = 30.9 bits (61), Expect(2) = 3e-008
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 608 GMIGTTRPTHYHVL 649
G GT+RPTHYH+L
Sbjct: 355 GTKGTSRPTHYHIL 314
>gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K21
3-PRIME, mRNA sequence
Length = 584
Score = 58.3 bits (121), Expect = 4e-008
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2 / -3
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYH+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 582 HYHILHDEIHFAADDLQDLVHSLSYVY 502
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCR 646
YT*+SE T SC SSA K ISSCR
Sbjct: 503 YT*ESECTRSCRSSAAKCISSCR 571
Score = 34.1 bits (68), Expect = 0.88
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = -1 / +1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIV 635
VH+R RM+K+L ++ + YL++Q+M++
Sbjct: 502 VHIRERMHKILQVIRGKVYLIMQDMVM 582
>gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. vulgare cDNA clone HX01H11
3-PRIME, mRNA sequence
Length = 669
Score = 55.1 bits (114), Expect = 4e-007
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2 / -2
Query: 650 HDEIGFSADEMQEFVHSLSYVY 715
HDEIGFSADE+QEFVHSLSYVY
Sbjct: 668 HDEIGFSADELQEFVHSLSYVY 603
Score = 36.3 bits (73), Expect = 0.18
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSC 649
YT*+SE TNS SSA KPISSC
Sbjct: 604 YT*ESEWTNSWSSSALKPISSC 669
>gb|BG417650.1|BG417650 HVSMEk0019A03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019A03f, mRNA sequence
Length = 785
Score = 54.7 bits (113), Expect = 5e-007
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P+ G + + L+ + + +KP+ II +RDGVS+
Sbjct: 104 AQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSDGHIY 283
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVA 484
Q + ELD II+AC L+ + P T++V+
Sbjct: 284 QFLLSELDAIIKACACLEPNFQPPGTLVVS 373
Score = 47.3 bits (97), Expect = 9e-005
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGK 337
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK G + +I S K
Sbjct: 35 PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFK 214
Query: 338 R 340
R
Sbjct: 215 R 217
>gb|CA008089.1|CA008089 HU09N22r HU Hordeum vulgare subsp. vulgare cDNA clone HU09N22
5-PRIME, mRNA sequence
Length = 519
Score = 54.7 bits (113), Expect = 5e-007
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIP 88
YL NLL+KINAKLGGLN+LLQ+EA+ +IP
Sbjct: 431 YLSNLLLKINAKLGGLNTLLQIEAARAIP 517
Score = 33.1 bits (66), Expect = 1.7
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 87 GIDEDASTCSNEFRPPSFALIFISKLSRY 1
GI AS SN RPPS A I SKL +Y
Sbjct: 516 GIARAASI*SNVLRPPSLAFILSSKLLKY 430
Score = 30.9 bits (61), Expect = 8.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 10 *FADEDQCKAWWSELVAAS*SIFVNT 87
*FA +D+C AWW + +A++ S NT
Sbjct: 439 *FATQDKC*AWWPQHIASNRSSPCNT 516
>gb|BF256707.2|BF256707 HVSMEf0010M08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010M08f, mRNA sequence
Length = 888
Score = 49.2 bits (101), Expect = 2e-005
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
+C H G+IGT+RPTHY+ L DE G+ ++++Q +
Sbjct: 1 LCNHNGLIGTSRPTHYYNLMDEHGYGSNDLQSW 99
>gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. vulgare cDNA clone HA10I02
3-PRIME, mRNA sequence
Length = 514
Score = 47.8 bits (98), Expect = 6e-005
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +2 / -3
Query: 644 VLHDEIGFSADEMQEFVHSLSYVY 715
+LHDEI F+AD++Q+ VHSLSYVY
Sbjct: 512 ILHDEIHFAADDLQDLVHSLSYVY 441
Score = 36.8 bits (74), Expect = 0.13
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCR 646
YT*+SE T SC SSA K ISSCR
Sbjct: 442 YT*ESECTRSCRSSAAKCISSCR 510
>gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. vulgare cDNA clone HU03I11
3-PRIME, mRNA sequence
Length = 562
Score = 39.1 bits (79), Expect(2) = 2e-004
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 551 VDSKVCHPKNFDFYMCAHAGMIGTTRP 631
+DSK+ H FD Y+C +AG+ GT++P
Sbjct: 562 IDSKIYHLMEFDCYICTNAGIQGTSQP 482
Score = 24.9 bits (48), Expect(2) = 2e-004
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 635 HYHVLHDEIGFSADEMQ 685
HY VL +E F+ADE+Q
Sbjct: 477 HYLVLWNENKFTADELQ 427
>gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. vulgare cDNA clone HF01C16
3-PRIME, mRNA sequence
Length = 623
Score = 41.8 bits (85), Expect = 0.004
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2 / -2
Query: 665 FSADEMQEFVHSLSYVY 715
FSADE+QEFVHSLSYVY
Sbjct: 622 FSADELQEFVHSLSYVY 572
>gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28j10 3', mRNA sequence
Length = 463
Score = 38.2 bits (77), Expect = 0.051
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVL DE F+AD +Q ++L Y Y
Sbjct: 459 HYHVLWDENNFTADGLQTLTNNLCYTY 379
>gb|BI953007.1|BI953007 HVSMEm0009C19f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0009C19f, mRNA sequence
Length = 1285
Score = 35.4 bits (71), Expect = 0.34
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2 / +2
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYR 214
K+ G + + +P + VP + +G DV+H PG A V + ++Y
Sbjct: 26 KINGKLGGINTQLQDGLPLDNGVPYMFIGADVNHPSPGNGESPSIAAVVASMNRGATKYV 205
Query: 215 ASVHTQSARLEMMSSL 262
+ Q R E++ +L
Sbjct: 206 PRIRAQPRRCEVIKNL 253
Score = 35.0 bits (70), Expect = 0.47
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQ 64
Y+ NL +KIN KLGG+N+ LQ
Sbjct: 5 YMSNLALKINGKLGGINTQLQ 67
>gb|BI957951.1|BI957951 HVSMEn0012H11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012H11f, mRNA sequence
Length = 454
Score = 35.0 bits (70), Expect = 0.47
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQ 64
Y+ NL +KIN KLGG+N+ LQ
Sbjct: 311 YMSNLALKINGKLGGINTQLQ 373
>gb|BU970966.1|BU970966 HB16D11r BC Hordeum vulgare subsp. vulgare cDNA clone HB16D11
5-PRIME, mRNA sequence
Length = 443
Score = 35.0 bits (70), Expect = 0.47
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQ 64
Y+ NL +KIN KLGG+N+ LQ
Sbjct: 283 YMSNLALKINGKLGGINTQLQ 345
>gb|BM376235.2|BM376235 EBma01_SQ002_L24_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_L24 5', mRNA sequence
Length = 555
Score = 34.5 bits (69), Expect = 0.64
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 626 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
RPTHY++L + GF ++Q+ V+ + +V+
Sbjct: 3 RPTHYYMLKNAHGFERVDLQKLVYRMCFVF 92
>gb|BQ768611.1|BQ768611 EBro08_SQ012_N05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_N05 5', mRNA sequence
Length = 714
Score = 27.2 bits (53), Expect(2) = 0.87
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +1 / -3
Query: 475 DCCSKEPPHQVLSDGITRQCSSWNC 549
+CC+K P++ + + WNC
Sbjct: 265 ECCTKSKPYRKMKSCLCPSKDPWNC 191
Score = 26.3 bits (51), Expect(2) = 0.87
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -2
Query: 155 RPSVAAVVSSRQWPLIS 205
RP AAV S R W L+S
Sbjct: 653 RPGAAAVASPRSWGLLS 603
>gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump
ATPase (Ha1) mRNA, complete cds
Length = 3446
Score = 34.1 bits (68), Expect = 0.88
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2 / -2
Query: 113 ILGMDVSHGHPGQDRPSVAAVVSSRQWPLISRYRASVHTQSARLEM 250
+ G+ V HG G+D PS+ V S +W S R + Q+ RL +
Sbjct: 205 VAGLLVGHGGGGRDLPSLRRVPSPSRWVGGSSRRTAASEQALRLRL 68
>gb|BE193203.1|BE193203 HVSMEh0080C01f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080C01f, mRNA sequence
Length = 708
Score = 33.1 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 140 HPGQDRPSVAAVVSSRQWPLISRYRASVHTQSARLEM 250
HP P VAA + R+WP++ R ++ S RL +
Sbjct: 545 HPR*ATPEVAARLGGRRWPILKTLRRTLLASSRRLRL 435
>gb|BE216742.2|BE216742 HV_CEb0011G20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011G20f, mRNA sequence
Length = 721
Score = 30.9 bits (61), Expect = 8.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2 / -3
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQ 685
D V G + + HP + + + AG + P H H LHD +G A + Q
Sbjct: 230 DVVGGGGPLVGEALHPLDVEAVLLEVAGDVLAGEPLHVHQLHDGLGHGALDPQ 72
>gb|BE559431.2|BE559431 HV_CEb0024K14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024K14f, mRNA sequence
Length = 507
Score = 30.9 bits (61), Expect = 8.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2 / -3
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQ 685
D V G + + HP + + + AG + P H H LHD +G A + Q
Sbjct: 352 DVVGGGGPLVGEALHPLDVEAVLLEVAGDVLAGEPLHVHQLHDGLGHGALDPQ 194
>gb|BF254430.3|BF254430 HVSMEf0004A01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004A01f, mRNA sequence
Length = 782
Score = 30.9 bits (61), Expect = 8.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1 / -3
Query: 628 PCCSNHPSMCTHVEVEVLRMANFTIHHSSR 539
PCC H +C H+ + LR + +H + R
Sbjct: 102 PCCIYHRHLCLHLHIHHLRCSLHLLHCNHR 13
>emb|AJ234607.1|HVU234607 Hordeum vulgare genomic DNA fragment; clone MWG0876.rev
Length = 265
Score = 30.9 bits (61), Expect = 8.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHV 94
++ NL +K+NAKLGG N L IP +
Sbjct: 127 FVANLALKMNAKLGGCNVSLYNSLPCQIPRM 219
>gb|BG369425.2|BG369425 HVSMEi0024F16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024F16f, mRNA sequence
Length = 891
Score = 25.8 bits (50), Expect(2) = 8.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3 / +2
Query: 576 RTSTSTCVHMLG*LEQQGPPTIMF 647
R CVH LG* PP ++F
Sbjct: 782 RLEDRVCVHDLG*AVSFSPPVVLF 853
Score = 24.4 bits (47), Expect(2) = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 73 IFVNTTCVASTHHHLRY 123
+ +N +CV HHHL +
Sbjct: 8 VVLNCSCVFHHHHHLHH 58
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 385,334,984
Number of Sequences: 312970
Number of extensions: 6373302
Number of successful extensions: 40550
Number of sequences better than 10.0: 106
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7889507874
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)