TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAO3g02.yg.2.1
         (344 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN816242.1|CN816242  HRO4518_E06_I12ZS5 Lib AA071E1X Aven...   132   3e-032
gb|CN816396.1|CN816396  HRO4520_C05_F10ZS5 Lib AA071E1X Aven...   132   3e-032

>gb|CN816242.1|CN816242 HRO4518_E06_I12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4518_E06_I12, mRNA sequence
          Length = 723

 Score =  132 bits (282), Expect = 3e-032
 Identities = 58/102 (56%), Positives = 69/102 (67%)
 Frame = +1 / +3

                                                                       
Query: 16  YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
           YLFDS + VSVL   HTIH  CLKEME+H +  CPLCS     M    ERL      L D
Sbjct: 72  YLFDSIDGVSVLRCGHTIHENCLKEMEKHRKLICPLCSKSVCDMSRAWERLDREIARLPD 251

                                                     
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
           S D +MVRILCN+C AI++V+F+LIA KCQ+  SYNTR I*+
Sbjct: 252 SYDGRMVRILCNECEAIAEVRFNLIALKCQSCQSYNTRRI*N 377




 Score =  107 bits (228), Expect = 9e-025
 Identities = 53/100 (53%), Positives = 60/100 (60%)
 Frame = -1 / -3

                                                                       
Query: 314 IXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMXXX 135
           I RVLY    WHL AIK   TS IA  SLHNMRTIL S ES        SLS    M   
Sbjct: 370 IRRVLYDWQLWHLSAIKLKRTSAIASHSLHNMRTILPS*ESGSLAISLSSLSHALDMSHT 191

                                                   
Query: 134 XLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
            LEQ GH N +C SISF+ F+*+V*   +T+T  +ESNKY
Sbjct: 190 DLEQSGHINLRCFSISFKQFS*IV*PHRKTDTPSIESNKY 71




 Score =  102 bits (218), Expect = 2e-023
 Identities = 46/102 (45%), Positives = 54/102 (52%)
 Frame = -2 / -1

                                                                       
Query: 319 FKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXAFPXXXXCX 140
           F+S  CCM   SGT AQS+  A L+LP   CIIC PF  HRS           P    C 
Sbjct: 375 FRSAECCMTGNSGT*AQSS*NAPLLLPHIHCIICEPFYHHRSLAVLLFPCPVSPMPLTCH 196

                                                     
Query: 139 XXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
              WS+ G+ T    PFLS + HE YD  A + H LS+RTST
Sbjct: 195 ILTWSRAGILTCDVSPFLSSSFHELYDHTAKQTHRLSSRTST 70



>gb|CN816396.1|CN816396 HRO4520_C05_F10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4520_C05_F10, mRNA sequence
          Length = 851

 Score =  132 bits (282), Expect = 3e-032
 Identities = 58/102 (56%), Positives = 69/102 (67%)
 Frame = +1 / +2

                                                                       
Query: 16  YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
           YLFDS + VSVL   HTIH  CLKEME+H +  CPLCS     M    ERL      L D
Sbjct: 515 YLFDSIDGVSVLRCGHTIHENCLKEMEKHRKLICPLCSKSVCDMSRAWERLDREIARLPD 694

                                                     
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
           S D +MVRILCN+C AI++V+F+LIA KCQ+  SYNTR I*+
Sbjct: 695 SYDGRMVRILCNECEAIAEVRFNLIALKCQSCQSYNTRRI*N 820




 Score =  107 bits (228), Expect = 9e-025
 Identities = 53/100 (53%), Positives = 60/100 (60%)
 Frame = -1 / -3

                                                                       
Query: 314 IXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMXXX 135
           I RVLY    WHL AIK   TS IA  SLHNMRTIL S ES        SLS    M   
Sbjct: 813 IRRVLYDWQLWHLSAIKLKRTSAIASHSLHNMRTILPS*ESGSLAISLSSLSHALDMSHT 634

                                                   
Query: 134 XLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
            LEQ GH N +C SISF+ F+*+V*   +T+T  +ESNKY
Sbjct: 633 DLEQSGHINLRCFSISFKQFS*IV*PHRKTDTPSIESNKY 514




 Score =  102 bits (218), Expect = 2e-023
 Identities = 46/102 (45%), Positives = 54/102 (52%)
 Frame = -2 / -1

                                                                       
Query: 319 FKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXAFPXXXXCX 140
           F+S  CCM   SGT AQS+  A L+LP   CIIC PF  HRS           P    C 
Sbjct: 818 FRSAECCMTGNSGT*AQSS*NAPLLLPHIHCIICEPFYHHRSLAVLLFPCPVSPMPLTCH 639

                                                     
Query: 139 XXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
              WS+ G+ T    PFLS + HE YD  A + H LS+RTST
Sbjct: 638 ILTWSRAGILTCDVSPFLSSSFHELYDHTAKQTHRLSSRTST 513



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 3,314,870
Number of Sequences: 8143
Number of extensions: 32826
Number of successful extensions: 2559
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 40
effective length of database: 1,241,767
effective search space used: 91890758
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)