TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAJ1a04.yg.2.1
         (386 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AF082991.1|AF082991  Avena sativa beta-D-glucosidase beta...    91   5e-030
emb|X78433.1|ASLBDG  A.sativa L. mRNA for beta-D-glucosidase       54   1e-023

>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
           complete cds
          Length = 1923

 Score = 90.9 bits (192), Expect(2) = 5e-030
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = +3 / +1

                                                                       
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPGRCSPGLDWAIPTGNSLXXP 329
           Y ++A     +F  K  NW  FN P  F   +YGTG+  PG CSPG+D AIP G++L  P
Sbjct: 652 YTDYATVCFEHFGDKVKNWITFNEPHSFCGLAYGTGLHAPGLCSPGMDCAIPQGDALRQP 831

                             
Query: 330 YIGXXNILLAHXXXXXLY 383
           YI   N+LLAH     +Y
Sbjct: 832 YIVGHNLLLAHAETVDVY 885




 Score = 53.8 bits (111), Expect(2) = 5e-030
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +3 / +1

                                       
Query: 42  NGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
           NGI+PY TLFHWDTPQ L D    FLD+
Sbjct: 553 NGIKPYITLFHWDTPQALADKYNDFLDR 636



>emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase
          Length = 1898

 Score = 53.8 bits (111), Expect(3) = 1e-023
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +3 / +1

                                       
Query: 42  NGIEPYXTLFHWDTPQXLVDXXXXFLDK 125
           NGI+PY TLFHWDTPQ L D    FLD+
Sbjct: 547 NGIKPYITLFHWDTPQALADEYKDFLDR 630




 Score = 44.6 bits (91), Expect(3) = 1e-023
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3 / +1

                                                    
Query: 150 YKNFAKXXXXNFXXKXXNWXXFNXPXXFTSFSYGTGVFXPG 272
           Y ++A     +F  K  NW  FN P  F    YGTG+  PG
Sbjct: 646 YTDYATVCFEHFGDKVKNWFTFNEPHSFCGLGYGTGLHAPG 768




 Score = 42.3 bits (86), Expect(3) = 1e-023
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3 / +1

                                                 
Query: 273 RCSPGLDWAIPTGNSLXXPYIGXXNILLAHXXXXXLYN 386
           RCS G+   IP  ++L  PYI   N+LLAH     +YN
Sbjct: 772 RCSAGMTCVIPEEDALRNPYIVGHNLLLAHAETVDVYN 885



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 2,349,036
Number of Sequences: 8143
Number of extensions: 14676
Number of successful extensions: 789
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 41
effective length of database: 1,233,624
effective search space used: 107325288
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)