TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAE40a10.yg.2.1
         (709 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN821434.1|CN821434  HRO4425_C07_E13ZS5 Lib AA069E1X Aven...    98   1e-021

>gb|CN821434.1|CN821434 HRO4425_C07_E13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4425_C07_E13, mRNA
           sequence
          Length = 435

 Score = 98.2 bits (208), Expect = 1e-021
 Identities = 37/46 (80%), Positives = 40/46 (86%)
 Frame = -1 / +2

                                                         
Query: 154 GVGVKGDNSWESWWDEEQAHIQTFRGRILETILSLRFLMFQYGIVY 17
           G  VKGD SWE+WWDEE  HIQTFRGRILETILSLRF +FQYG+VY
Sbjct: 2   GTRVKGDASWEAWWDEELGHIQTFRGRILETILSLRFFIFQYGVVY 139



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,842,102
Number of Sequences: 8143
Number of extensions: 112494
Number of successful extensions: 1139
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 233728896
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)