TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= M73028.2.3
         (1601 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AJ133638.1|ASA133638  Avena sativa mRNA for myb protein       171   3e-043

>emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein
          Length = 2287

 Score =  171 bits (368), Expect = 3e-043
 Identities = 59/103 (57%), Positives = 84/103 (81%)
 Frame = +2 / +2

                                                                       
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
           LK+G WT+ ED +L +Y+ +HGEG+W ++ KN GL RCGKSCRLRW N+LR ++K+G  +
Sbjct: 383 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 562

                                                      
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
            EEE +II+LH+ +GN+W+ +A++LPGRTDNEIKNYWN+ + R
Sbjct: 563 PEEERLIIQLHSKMGNKWARMAANLPGRTDNEIKNYWNTRIKR 691



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 14,266,557
Number of Sequences: 8143
Number of extensions: 196334
Number of successful extensions: 1728
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 586113376
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)