TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 4424417.2.1
         (1137 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN815915.1|CN815915  HRO4511_H05_P09ZS5 Lib AA071E1X Aven...    91   1e-032

>gb|CN815915.1|CN815915 HRO4511_H05_P09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4511_H05_P09, mRNA sequence
          Length = 842

 Score = 91.3 bits (193), Expect(2) = 1e-032
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = +2 / -3

                                                                       
Query: 335 LEIPPFDLIIGNKTLAGSCIGGMRDTQEMINVAAKHGVTADIELVAADYVNTAMERLAKA 514
           + + P  L +G ++L+GS  GG +DTQEM+N  A + +  DIEL+  DY+N A+ERL   
Sbjct: 483 IRVHPATLNLGARSLSGSVTGGTKDTQEMMNFCAANKIYPDIELIKIDYINEALERLVNR 304

                          
Query: 515 DVRYRFVIDIGNTLK 559
           DVRYRFVIDI ++ K
Sbjct: 303 DVRYRFVIDIESSFK 259




 Score = 64.3 bits (134), Expect(2) = 1e-032
 Identities = 27/67 (40%), Positives = 42/67 (62%)
 Frame = +2 / -3

                                                                       
Query: 125 STSPGKKQEALDRLGADAFVVSKDAEEMKAAASTMDGIINTVSANLTLAPYMGLLKPNGK 304
           STS  K+ EA+  LGAD FV+S D ++M +  +++  I++T S +    PY+ LLK  G 
Sbjct: 690 STSESKRDEAISLLGADNFVLSSDEKQMGSLKNSLHFIVDTASGDHPFDPYLALLKVGGV 511

                  
Query: 305 MIMVGLP 325
           M ++G P
Sbjct: 510 MALLGFP 490



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 11,112,211
Number of Sequences: 8143
Number of extensions: 148041
Number of successful extensions: 1083
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 403871130
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)