TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3071103.2.1
         (570 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN821316.1|CN821316  HRO4423_H11_P21ZS5 Lib AA069E1X Aven...    97   2e-021

>gb|CN821316.1|CN821316 HRO4423_H11_P21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4423_H11_P21, mRNA
           sequence
          Length = 372

 Score = 97.3 bits (206), Expect = 2e-021
 Identities = 40/61 (65%), Positives = 45/61 (73%)
 Frame = -2 / +3

                                                                       
Query: 251 TNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVEVAAQ* 72
           TNIINGG+ECG G D RV DRIGFY RYC +  +  G NLDC  QRPFNS L+  +AAQ*
Sbjct: 6   TNIINGGLECGIGPDDRVADRIGFYLRYCAILGVDPGINLDCYNQRPFNSWLSAGLAAQ* 185

            
Query: 71  K 69
           K
Sbjct: 186 K 188



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,317,748
Number of Sequences: 8143
Number of extensions: 72297
Number of successful extensions: 2008
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 42
effective length of database: 1,225,481
effective search space used: 180145707
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)