TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2591258.2.1
         (819 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AB076979.1|  Avena sativa AsCCOAOMT mRNA for caffeoyl-Co...   177   2e-045

>dbj|AB076979.1| Avena sativa AsCCOAOMT mRNA for caffeoyl-CoA 3-O-methyltransferase,
           partial cds
          Length = 622

 Score =  177 bits (382), Expect = 2e-045
 Identities = 72/127 (56%), Positives = 87/127 (68%)
 Frame = -3 / +3

                                                                       
Query: 562 IGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQ 383
           IG P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYH+RL++
Sbjct: 6   IGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHQRLMK 185

                                                                       
Query: 382 LLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIAD 203
           L+RVGGL+ YDNTLW GSV  P D P+ +                 AD RV +CQ+ + D
Sbjct: 186 LVRVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADDRVEICQLPVGD 365

                  
Query: 202 GLXLCRR 182
           G+ LCRR
Sbjct: 366 GITLCRR 386




 Score = 98.2 bits (208), Expect = 2e-021
 Identities = 46/79 (58%), Positives = 53/79 (67%)
 Frame = +3 / -1

                                                                       
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
           T+P  SVLS   RPPTL       W*LR  +LSAST  KS +P   SS +  SSTGSA P
Sbjct: 241 TEPFQSVLSYPSRPPTLTSFMRRWW*LR*LSLSASTKTKSKVPWLASSSSSASSTGSAGP 62

                              
Query: 507 TRKSILCATPAFSITGDPI 563
           +RKSILCATPAFS+ G P+
Sbjct: 61  SRKSILCATPAFSMHGSPM 5



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,207,875
Number of Sequences: 8143
Number of extensions: 84962
Number of successful extensions: 1072
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 278770402
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)