TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2493751.2.1
         (577 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|Z15131.1|ASBGLUCAN  A.sativa mRNA for beta glucanase          108   7e-025
gb|CN821029.1|CN821029  HRO4422_G03_M06ZS5 Lib AA069E1X Aven...    76   4e-024

>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase
          Length = 1448

 Score =  108 bits (231), Expect = 7e-025
 Identities = 48/115 (41%), Positives = 65/115 (56%)
 Frame = +2 / +1

                                                                       
Query: 8   YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
           YP+++   +P+ + ++YALF A    VQDGA  Y NLFD TVDA   A+ K G  GV   
Sbjct: 619 YPYLAWAYNPSAMDMSYALFTASGTVVQDGAYGYQNLFDTTVDAFYTAMGKHGGAGVKLV 798

                                                                  
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDED 352
           V+E+GWP+AG  AATP NA  YN  ++    RG        ET    +F+   +D
Sbjct: 799 VSESGWPSAGGEAATPANARIYNQYLINHVGRGTPRHPGGIETYVFAMFNENQKD 963



>gb|CN821029.1|CN821029 HRO4422_G03_M06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4422_G03_M06, mRNA
           sequence
          Length = 508

 Score = 75.8 bits (159), Expect(2) = 4e-024
 Identities = 31/67 (46%), Positives = 40/67 (59%)
 Frame = +2 / +3

                                                                       
Query: 86  VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
           VQDG+  Y NLFDA VD   +AL   G G V   V+E+GWP+AG  AA+  NA  YN  +
Sbjct: 18  VQDGSNAYQNLFDALVDTFYSALGSAGAGNVKIVVSESGWPSAGGTAASAANAQTYNQNL 197

                  
Query: 266 VERPARG 286
           +    +G
Sbjct: 198 INHVGKG 218




 Score = 49.6 bits (102), Expect(2) = 4e-024
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +2 / +3

                                                 
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINF 430
           +E ++F +++E+ K G E E+HFG+F  D S AY I F
Sbjct: 240 IETYIFAMFNENKKTGDETEKHFGLFNTDKSPAYSIKF 353



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,728,734
Number of Sequences: 8143
Number of extensions: 50055
Number of successful extensions: 1035
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 42
effective length of database: 1,225,481
effective search space used: 182596669
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)