TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2455940.2.1
         (1115 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AB076979.1|  Avena sativa AsCCOAOMT mRNA for caffeoyl-Co...   264   2e-071

>dbj|AB076979.1| Avena sativa AsCCOAOMT mRNA for caffeoyl-CoA 3-O-methyltransferase,
           partial cds
          Length = 622

 Score =  264 bits (571), Expect = 2e-071
 Identities = 107/130 (82%), Positives = 115/130 (88%)
 Frame = -2 / +3

                                                                       
Query: 640 LGLPCIEKAGVAHKIDFREGPALPVLDDLIAEEKNHGSFDFVFVDADKDNYLNYHERXXX 461
           +GLPCIEKAGVAHKIDFREGPALPVLD L+ +E NHG+FDFVFVDADKDNYLNYH+R   
Sbjct: 6   IGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHQRLMK 185

                                                                       
Query: 460 XXXXXXLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADDRVEICQLPVGD 281
                 L+GYDNTLWNGSVVLP DAPMRKYIR+YRDFVL LNKALAADDRVEICQLPVGD
Sbjct: 186 LVRVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADDRVEICQLPVGD 365

                     
Query: 280 GVTLCRRVK* 251
           G+TLCRR K*
Sbjct: 366 GITLCRRAK* 395




 Score = 87.2 bits (184), Expect(2) = 6e-031
 Identities = 38/59 (64%), Positives = 39/59 (66%)
 Frame = +3 / -1

                                                                      
Query: 252 HLTRRQRVTPSPTGSWQIXXXXXXXXXXXXXXXKSR*KRMYLRMGASSGSTTEPFHSVL 428
           HL RRQ V PSPTGSWQI               KSR* RMYLRMGAS+GSTTEPF SVL
Sbjct: 394 HLARRQSVMPSPTGSWQISTRSSAARALLSSRTKSR**RMYLRMGASAGSTTEPFQSVL 218




 Score = 62.5 bits (130), Expect(2) = 6e-031
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = +3 / -1

                                               
Query: 531 PWFFSSAMRSSRTGSAGPSRKSILWATPAFSMQGRP 638
           PW  SS+  +S TGSAGPSRKSIL ATPAFSM G P
Sbjct: 115 PWLASSSSSASSTGSAGPSRKSILCATPAFSMHGSP 8



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,296,316
Number of Sequences: 8143
Number of extensions: 75600
Number of successful extensions: 1405
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 395406765
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)