TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2437842.2.1
         (1093 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN817366.1|CN817366  HRO4465_D03_H05ZS5 Lib AA070E1X Aven...   249   6e-067
gb|CN816052.1|CN816052  HRO4516_D03_H06ZS5 Lib AA071E1X Aven...   150   4e-037

>gb|CN817366.1|CN817366 HRO4465_D03_H05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
           Avena sativa cDNA clone HRO4465_D03_H05, mRNA sequence
          Length = 633

 Score =  249 bits (538), Expect = 6e-067
 Identities = 106/120 (88%), Positives = 115/120 (95%)
 Frame = +1 / +3

                                                                       
Query: 400 IGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPV 579
           IG+VDDDDEIFIVDRLKEIIKYKGFQV PAELEALLITHP+IKDAAVV +KD++ GEVPV
Sbjct: 12  IGFVDDDDEIFIVDRLKEIIKYKGFQVAPAELEALLITHPDIKDAAVVGVKDDLCGEVPV 191

                                                                       
Query: 580 AFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
           AFI R EGSEI+ENEIKQFV+KEVVFYKRIN+V+FTDSIPKNPSGKILRKDLRARLAAGI
Sbjct: 192 AFIKRIEGSEITENEIKQFVSKEVVFYKRINKVYFTDSIPKNPSGKILRKDLRARLAAGI 371




 Score =  163 bits (351), Expect = 4e-041
 Identities = 73/101 (72%), Positives = 81/101 (80%)
 Frame = -3 / -3

                                                                       
Query: 758 MPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNA 579
           MPAAS AL+SFLRILPEGF G+ESVK          TS  TNCLISFS+IS+PS+R+M A
Sbjct: 370 MPAASLALKSFLRILPEGFLGMESVK*TLLILL*KTTSLETNCLISFSVISDPSIRLMKA 191

                                                    
Query: 578 TGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLI 456
           TGTSP  SSF  TTAASL+SGCVMRRASSSAG TWKPLYL+
Sbjct: 190 TGTSPQRSSFTPTTAASLMSGCVMRRASSSAGATWKPLYLM 68




 Score =  113 bits (242), Expect = 4e-026
 Identities = 55/107 (51%), Positives = 66/107 (61%)
 Frame = +3 / +2

                                                                       
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
           QA+GD+Q+QGLP  + GA  P HH   +QG R    E *S RRS G +H    R+*D  E
Sbjct: 53  QAQGDHQVQGLPGGAGGARGPPHHAPGHQGRRRRRSEG*SLRRSAGRLHQADRRV*DHRE 232

                                                          
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAACRGHP 761
           RDQA+  +GG  LQEDQQ  LH  + +E  RQD  EG ES A R HP
Sbjct: 233 RDQAIRLQGGCFLQEDQQGLLHRLHSQEPFRQDPKEGLESQARRRHP 373




 Score =  111 bits (238), Expect = 2e-025
 Identities = 54/112 (48%), Positives = 71/112 (63%)
 Frame = -2 / -2

                                                                       
Query: 759 DARGKPRSQVLPKNLAGGILRDRIREENSVDPLVEHXXXXXXXXXXXXXXLRAFTAYNEC 580
           DA G+P SQVLP +LAG +L + + E + VDPLVE+              LR F   +E 
Sbjct: 371 DAGGEPGSQVLP*DLAGRVLGNGVGEVDLVDPLVENNLLGDELLDLVLGDLRPFDPLDEG 192

                                                               
Query: 579 HRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDL 424
            R FA + I H  + G+LD R+ DE+G +LRRR+LEALV D LL+PV+DEDL
Sbjct: 191 DRHFAAEIILHSYDGGVLDVRVRDEEGLELRRRHLEALVLDDLLEPVDDEDL 36



>gb|CN816052.1|CN816052 HRO4516_D03_H06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4516_D03_H06, mRNA sequence
          Length = 547

 Score =  150 bits (322), Expect = 4e-037
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = +1 / +2

                                                                       
Query: 532 AAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPS 711
           AAVV +KD++ GEVPVAFI R EGSEI+ENEIKQFV+KEVVFYKRIN+V+FTDSIPKNPS
Sbjct: 11  AAVV*VKDDLCGEVPVAFIKRIEGSEITENEIKQFVSKEVVFYKRINKVYFTDSIPKNPS 190

                           
Query: 712 GKILRKDLRARLAAGI 759
           GKILRKDLRARLAAGI
Sbjct: 191 GKILRKDLRARLAAGI 238




 Score =  110 bits (235), Expect = 4e-025
 Identities = 51/76 (67%), Positives = 57/76 (75%)
 Frame = -3 / -2

                                                                       
Query: 758 MPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNA 579
           MPAAS AL+SFLRILPEGF G+ESVK          TS  TNCLISFS+IS+PS+R+M A
Sbjct: 237 MPAASLALKSFLRILPEGFLGMESVK*TLLILL*KTTSLETNCLISFSVISDPSIRLMKA 58

                           
Query: 578 TGTSPATSSFIETTAA 531
           TGTSP  SSF  TTAA
Sbjct: 57  TGTSPQRSSFTHTTAA 10



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 10,995,970
Number of Sequences: 8143
Number of extensions: 149355
Number of successful extensions: 932
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 385733205
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)