TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815139.1|CN815139 HRO4506_C09_E18ZS5 Lib AA071E1X Aven... 116 9e-027
gb|CN818522.1|CN818522 HRO4459_F08_K15ZS5 Lib AA070E1X Aven... 35 0.044
gb|CN821314.1|CN821314 HRO4423_H09_P17ZS5 Lib AA069E1X Aven... 26 0.21
gb|CN818427.1|CN818427 HRO4460_F04_K08ZS5 Lib AA070E1X Aven... 31 0.40
gb|CN819514.1|CN819514 HRO4401_A09_A17ZS5 Lib AA069E1X Aven... 26 0.55
gb|CN818770.1|CN818770 HRO4468_D04_G08ZS5 Lib AA070E1X Aven... 30 1.0
gb|CN819579.1|CN819579 HRO4401_G09_M17ZS5 Lib AA069E1X Aven... 29 1.4
gb|CN815888.1|CN815888 HRO4511_F02_L03ZS5 Lib AA071E1X Aven... 29 2.0
gb|CN816923.1|CN816923 HRO4526_C08_E16ZS5 Lib AA071E1X Aven... 29 2.0
gb|CN817625.1|CN817625 HRO4453_H11_P21ZS5 Lib AA070E1X Aven... 29 2.7
gb|CN817669.1|CN817669 HRO4453_H03_P05ZS5 Lib AA070E1X Aven... 29 2.7
gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Aven... 27 2.7
gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Aven... 27 3.3
gb|CN815845.1|CN815845 HRO4511_B04_D07ZS5 Lib AA071E1X Aven... 24 3.6
gb|CN816143.1|CN816143 HRO4517_E01_I01ZS5 Lib AA071E1X Aven... 28 3.7
gb|L39774.1|ASTRASTL1A Avena sativa thaumatin-like pathogen... 28 3.7
gb|CN821627.1|CN821627 HRO4408_D09_H18ZS5 Lib AA069E1X Aven... 24 4.0
gb|CN815579.1|CN815579 HRO4513_C03_E05ZS5 Lib AA071E1X Aven... 26 4.1
gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Aven... 25 4.7
gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Aven... 25 4.9
gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Aven... 25 5.0
gb|CN814975.1|CN814975 HRO4504_E05_J10ZS5 Lib AA071E1X Aven... 28 5.1
gb|CN815595.1|CN815595 HRO4513_D08_G15ZS5 Lib AA071E1X Aven... 28 5.1
gb|CN815981.1|CN815981 HRO4515_E12_J23ZS5 Lib AA071E1X Aven... 28 5.1
gb|CN815984.1|CN815984 HRO4515_F03_L05ZS5 Lib AA071E1X Aven... 28 5.1
gb|CN816860.1|CN816860 HRO4525_F04_K07ZS5 Lib AA071E1X Aven... 28 5.1
gb|CN817979.1|CN817979 HRO4472_H11_O22ZS5 Lib AA070E1X Aven... 28 5.1
gb|CN818259.1|CN818259 HRO4456_H12_O24ZS5 Lib AA070E1X Aven... 28 5.1
gb|CN818521.1|CN818521 HRO4459_F07_K13ZS5 Lib AA070E1X Aven... 28 5.1
gb|CN818661.1|CN818661 HRO4457_F10_L19ZS5 Lib AA070E1X Aven... 28 5.1
gb|CN818845.1|CN818845 HRO4473_H09_XXXZS5 Lib AA070E1X Aven... 28 5.1
gb|CN818926.1|CN818926 HRO4474_H09_P18ZS5 Lib AA070E1X Aven... 28 5.1
gb|CN820515.1|CN820515 HRO4413_C05_E09ZS5 Lib AA069E1X Aven... 28 5.1
gb|U11693.1|ASU11693 Avena sativa victorin binding protein ... 28 5.1
gb|CN818767.1|CN818767 HRO4457_E04_J07ZS5 Lib AA070E1X Aven... 25 5.3
gb|CN814771.1|CN814771 HRO4502_C11_E22ZS5 Lib AA071E1X Aven... 27 7.0
gb|CN815467.1|CN815467 HRO4512_A03_B06ZS5 Lib AA071E1X Aven... 27 7.0
gb|CN816292.1|CN816292 HRO4519_B03_D05ZS5 Lib AA071E1X Aven... 27 7.0
gb|CN818013.1|CN818013 HRO4472_F03_K06ZS5 Lib AA070E1X Aven... 27 7.0
gb|CN818096.1|CN818096 HRO4471_H03_O05ZS5 Lib AA070E1X Aven... 27 7.0
gb|CN818575.1|CN818575 HRO4467_A02_A03ZS5 Lib AA070E1X Aven... 27 7.0
gb|CN819375.1|CN819375 HRO4405_C04_E07ZS5 Lib AA069E1X Aven... 27 7.0
gb|CN819528.1|CN819528 HRO4401_C01_E01ZS5 Lib AA069E1X Aven... 27 7.0
gb|CN819865.1|CN819865 HRO4407_A03_B05ZS5 Lib AA069E1X Aven... 27 7.0
gb|CN820605.1|CN820605 HRO4415_D03_H05ZS5 Lib AA069E1X Aven... 27 7.0
emb|AJ780952.1| Avena vaviloviana partial rga gene for puta... 27 7.0
gb|CN820540.1|CN820540 HRO4413_E09_I17ZS5 Lib AA069E1X Aven... 25 7.6
gb|CN817885.1|CN817885 HRO4459_C06_E11ZS5 Lib AA070E1X Aven... 25 8.1
gb|CN819919.1|CN819919 HRO4407_H03_P05ZS5 Lib AA069E1X Aven... 25 8.2
gb|CN814987.1|CN814987 HRO4504_F05_L10ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN815265.1|CN815265 HRO4507_G06_N11ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN815297.1|CN815297 HRO4508_B05_D10ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN816271.1|CN816271 HRO4518_H03_O06ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN816624.1|CN816624 HRO4522_H12_O24ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN816784.1|CN816784 HRO4524_G03_N06ZS5 Lib AA071E1X Aven... 27 9.6
gb|CN818618.1|CN818618 HRO4467_C08_E15ZS5 Lib AA070E1X Aven... 27 9.6
gb|CN818646.1|CN818646 HRO4467_E06_I11ZS5 Lib AA070E1X Aven... 27 9.6
gb|CN820300.1|CN820300 HRO4417_G10_M19ZS5 Lib AA069E1X Aven... 27 9.6
gb|CN821000.1|CN821000 HRO4422_D07_G14ZS5 Lib AA069E1X Aven... 27 9.6
gb|CN821044.1|CN821044 HRO4422_H07_O14ZS5 Lib AA069E1X Aven... 27 9.6
gb|CN821272.1|CN821272 HRO4423_D11_H21ZS5 Lib AA069E1X Aven... 27 9.6
>gb|CN815139.1|CN815139 HRO4506_C09_E18ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4506_C09_E18, mRNA sequence
Length = 476
Score = 116 bits (248), Expect = 9e-027
Identities = 45/74 (60%), Positives = 58/74 (78%)
Frame = -3 / +3
Query: 591 NLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLR 412
N+GNPGEFTMLELA+ V++ I+P + +NT DDP +RKPDIS+AKE L WEPK+ LR
Sbjct: 6 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDISKAKELLDWEPKVVLR 185
Query: 411 EGLPLMVSDFRKRI 370
+GL LM DFR+R+
Sbjct: 186 DGLVLMEDDFRERL 227
Score = 45.1 bits (92), Expect(2) = 8e-010
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R KS +M +PSRR GS R+SLA LMSG GSS VF
Sbjct: 223 RSLKSSSMSTKPSRRTTLGSQSRSSLALLMSGFLWRGSSGVF 98
Score = 33.6 bits (67), Expect(2) = 8e-010
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -2
Query: 524 GSMVSWTTLASSSMVNSPGLPRL 592
G + S+T ASSSMVNSPG P L
Sbjct: 73 GLISSFTFSASSSMVNSPGFPML 5
>gb|CN818522.1|CN818522 HRO4459_F08_K15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_F08_K15, mRNA sequence
Length = 835
Score = 34.5 bits (69), Expect = 0.044
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3 / +2
Query: 480 HKRKPDISRAKEFLGWEPKIPLREGLPLMVSDF 382
H+ SRAK+ LG+EP +PL++GL + +
Sbjct: 8 HEGTFSCSRAKDQLGYEPIVPLKDGLKRTIESY 106
>gb|CN821314.1|CN821314 HRO4423_H09_P17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_H09_P17, mRNA
sequence
Length = 656
Score = 26.3 bits (51), Expect(2) = 0.21
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3 / -3
Query: 645 QKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGH 746
Q H SW HH+ SR ++ P + + Q GH
Sbjct: 153 QLHP*ASWAWLWHHQGSRDCNADPHESEHQQVGH 52
Score = 26.3 bits (51), Expect(2) = 0.21
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / -1
Query: 2 FFFFFLQNDRIYTIYMMLC 58
FFFFF + RIY + +LC
Sbjct: 653 FFFFFSRI*RIYELPQLLC 597
>gb|CN818427.1|CN818427 HRO4460_F04_K08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_F04_K08, mRNA sequence
Length = 317
Score = 31.3 bits (62), Expect = 0.40
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 3 FFFFFCKMTGFIPYI*CYALNKE 71
FFFFFCK+ G PY+ + ++E
Sbjct: 314 FFFFFCKLKGN*PYVLVLSYSQE 246
>gb|CN819514.1|CN819514 HRO4401_A09_A17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_A09_A17, mRNA
sequence
Length = 376
Score = 25.8 bits (50), Expect(2) = 0.55
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYM 49
FFFFFL +++I+ Y+
Sbjct: 375 FFFFFLSSNKIHITYI 328
Score = 24.4 bits (47), Expect(2) = 0.55
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -2
Query: 738 HGHRQCTC 761
H HRQCTC
Sbjct: 246 HKHRQCTC 223
>gb|CN818770.1|CN818770 HRO4468_D04_G08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_D04_G08, mRNA sequence
Length = 845
Score = 29.9 bits (59), Expect = 1.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / -3
Query: 645 QKHIGNSWFAFHHHKPSRAPSSVPEQQ 725
Q N A H HKP+ PSS+ EQ+
Sbjct: 810 QPQTNNPRQAIHFHKPTEGPSSLHEQK 730
>gb|CN819579.1|CN819579 HRO4401_G09_M17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_G09_M17, mRNA
sequence
Length = 806
Score = 29.5 bits (58), Expect = 1.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / +3
Query: 367 RRPRRYCHHPGNQQG*DEG 311
RRP R HHPG+++G EG
Sbjct: 525 RRPGRGNHHPGSRRGGKEG 581
>gb|CN815888.1|CN815888 HRO4511_F02_L03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_F02_L03, mRNA sequence
Length = 425
Score = 29.0 bits (57), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1 / +3
Query: 1145 TECGVAM*QSEKGCLADSFSFCSFCFLEMVRVSLN 1041
T CG+++ GCL C FCF V V L+
Sbjct: 159 TNCGLSVFSRINGCLLAPRCLCVFCFSVCVCVYLD 263
>gb|CN816923.1|CN816923 HRO4526_C08_E16ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_C08_E16, mRNA sequence
Length = 645
Score = 29.0 bits (57), Expect = 2.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYMMLCSQQRIRSSWFISNCSTELFFCI 124
FFFFF I TI + C Q++ + CS F+ I
Sbjct: 641 FFFFFTHKILIITILSIFCVQRQQNFCFGNLKCSQYAFYTI 519
>gb|CN817625.1|CN817625 HRO4453_H11_P21ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_H11_P21, mRNA sequence
Length = 363
Score = 28.6 bits (56), Expect = 2.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2 / -2
Query: 479 CGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCS 610
C SS +S A S+ SW + ASSS +S L L +CS
Sbjct: 149 CFSSSD*SSSSDTAFSSLSSWLSSASSSSKSSSSLALLASSSCS 18
>gb|CN817669.1|CN817669 HRO4453_H03_P05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_H03_P05, mRNA sequence
Length = 433
Score = 28.6 bits (56), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 2 FFFFFLQNDRIYTIYMMLCSQQRIRSSWFI 91
FFFFF +++ I + C QR+++S F+
Sbjct: 430 FFFFFGKHNLILNSCLWQCRSQRVQAS*FL 341
>gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4466_C08_F16, mRNA sequence
Length = 598
Score = 26.7 bits (52), Expect(2) = 2.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2 / -3
Query: 479 CGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
C SS +S A S+ SW + ASSS +S L L +C
Sbjct: 401 CFSSSD*SSSSDTAFSSLSSWLSSASSSSKSSSSLALLASSSC 273
Score = 21.7 bits (41), Expect(2) = 2.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3 / -1
Query: 1431 FKCTGKCSKH 1460
F+CT C KH
Sbjct: 124 FQCTSGCQKH 95
>gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_F11_K22, mRNA sequence
Length = 753
Score = 26.7 bits (52), Expect(2) = 3.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2 / -3
Query: 479 CGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
C SS +S A S+ SW + ASSS +S L L +C
Sbjct: 613 CFSSSD*SSSSDTAFSSLSSWLSSASSSSKSSSSLALLASSSC 485
Score = 24.9 bits (48), Expect(2) = 4.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2 / -1
Query: 346 HHPGNQQG*DEGAHMTWKF 290
HHP Q * +G + W++
Sbjct: 156 HHPSPQAS*HQGQQLPWEY 100
Score = 23.1 bits (44), Expect(2) = 4.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2 / -1
Query: 925 PAPAGGDLLGQCQSHRCQE 869
PA A CQ HRC++
Sbjct: 351 PATAQFQCTSGCQKHRCKD 295
Score = 21.7 bits (41), Expect(2) = 3.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3 / -1
Query: 1431 FKCTGKCSKH 1460
F+CT C KH
Sbjct: 336 FQCTSGCQKH 307
>gb|CN815845.1|CN815845 HRO4511_B04_D07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B04_D07, mRNA sequence
Length = 434
Score = 24.0 bits (46), Expect(2) = 3.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3 / -3
Query: 162 GKKRMALQHQPRYSSNTFPTNYVAH 236
G+ + QPRYSS+ Y AH
Sbjct: 117 GRSFHPCRQQPRYSSHGQMQQYTAH 43
Score = 23.5 bits (45), Expect(2) = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / -3
Query: 2 FFFFFLQNDRIYTIYM 49
FFFFF+ D Y +++
Sbjct: 432 FFFFFI*KDAFYYVHL 385
>gb|CN816143.1|CN816143 HRO4517_E01_I01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E01_I01, mRNA sequence
Length = 384
Score = 28.1 bits (55), Expect = 3.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2 / +3
Query: 551 ASSSMVNSPGLPRLNGPTCSPS 616
ASSS NSP P L P SPS
Sbjct: 99 ASSSPGNSPSTPSLRAPRPSPS 164
>gb|L39774.1|ASTRASTL1A Avena sativa thaumatin-like pathogenesis-related protein (rastl-1)
mRNA, complete cds
Length = 734
Score = 28.1 bits (55), Expect = 3.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2 / +2
Query: 539 WTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSET 652
WT+ A+ + +S G+P P +P++S P+T + T
Sbjct: 422 WTSPAAPASRSSAGMPTAPMPITTPTMSPRTPATATAT 535
>gb|CN821627.1|CN821627 HRO4408_D09_H18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_D09_H18, mRNA
sequence
Length = 657
Score = 24.4 bits (47), Expect(2) = 4.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 540 GQPWQAQAW 566
GQPWQ +AW
Sbjct: 428 GQPWQWKAW 402
Score = 23.5 bits (45), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 2 FFFFFLQN 25
FFFFFLQN
Sbjct: 655 FFFFFLQN 632
>gb|CN815579.1|CN815579 HRO4513_C03_E05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_C03_E05, mRNA sequence
Length = 690
Score = 26.3 bits (51), Expect(2) = 4.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 2 FFFFFLQNDRIYTIYMM 52
FFFFF Q IYT Y++
Sbjct: 426 FFFFFTQIMYIYTFYII 376
Score = 21.7 bits (41), Expect(2) = 4.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2 / -3
Query: 296 PCHVRSFILTLLVSGVVAVASWSPK 370
PC + +LTL S +V+ + SP+
Sbjct: 79 PCRAGASLLTLPCSNLVSWLNASPR 5
>gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_E12_J23, mRNA
sequence
Length = 807
Score = 24.9 bits (48), Expect(2) = 4.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2 / +1
Query: 346 HHPGNQQG*DEGAHMTWKF 290
HHP Q * +G + W++
Sbjct: 649 HHPSPQAS*HQGQQLPWEY 705
Score = 23.1 bits (44), Expect(2) = 4.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2 / +1
Query: 925 PAPAGGDLLGQCQSHRCQE 869
PA A CQ HRC++
Sbjct: 454 PATAQFQCTSGCQKHRCKD 510
>gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_B05_C10, mRNA sequence
Length = 838
Score = 24.9 bits (48), Expect(2) = 4.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 346 HHPGNQQG*DEGAHMTWKF 290
HHP Q * +G + W++
Sbjct: 224 HHPSPQAS*HQGQQLPWEY 168
Score = 23.1 bits (44), Expect(2) = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2 / -3
Query: 925 PAPAGGDLLGQCQSHRCQE 869
PA A CQ HRC++
Sbjct: 419 PATAQFQCTSGCQKHRCKD 363
>gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_H06_O11, mRNA sequence
Length = 856
Score = 24.9 bits (48), Expect(2) = 5.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 346 HHPGNQQG*DEGAHMTWKF 290
HHP Q * +G + W++
Sbjct: 302 HHPSPQAS*HQGQQLPWEY 246
Score = 23.1 bits (44), Expect(2) = 5.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2 / -3
Query: 925 PAPAGGDLLGQCQSHRCQE 869
PA A CQ HRC++
Sbjct: 497 PATAQFQCTSGCQKHRCKD 441
>gb|CN814975.1|CN814975 HRO4504_E05_J10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_E05_J10, mRNA sequence
Length = 740
Score = 27.6 bits (54), Expect = 5.1
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3 / -1
Query: 144 EKEKIQGKKRMALQHQPRYSSNTFPTNYVAHSFCQ*GESNQAARSRATKNFHVMCA 311
E+ ++G R+AL+H+P ++ V S C+ S + H M A
Sbjct: 686 EEPSVRGAGRLALRHRPTHTCGLPERQEVGASMCRSPSSRVHGCEERGRRLHSMGA 519
>gb|CN815595.1|CN815595 HRO4513_D08_G15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_D08_G15, mRNA sequence
Length = 842
Score = 27.6 bits (54), Expect = 5.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 1419 VFPCFKCTGKCSKH 1460
+FP +CTG C+ H
Sbjct: 626 IFPILRCTGACASH 585
>gb|CN815981.1|CN815981 HRO4515_E12_J23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_E12_J23, mRNA sequence
Length = 639
Score = 27.6 bits (54), Expect = 5.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYMMLCSQQRIRSSWF 88
FFFFF+ ++ + + R SWF
Sbjct: 635 FFFFFMMKSNVFPYILPIQMLSRKNESWF 549
>gb|CN815984.1|CN815984 HRO4515_F03_L05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_F03_L05, mRNA sequence
Length = 779
Score = 27.6 bits (54), Expect = 5.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2 / +2
Query: 377 LRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLC 481
LR + + G+PSR +HP R ++ L LC
Sbjct: 353 LRVRDLLYGQPSRGENMEAHPSTGRPRRLTNLGLC 457
>gb|CN816860.1|CN816860 HRO4525_F04_K07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_F04_K07, mRNA sequence
Length = 708
Score = 27.6 bits (54), Expect = 5.1
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -1 / +1
Query: 1175 EISLCFTCFATECGVAM*QSEKGCLADSFSFCSFCFLEMVRV 1050
E+ + + C A + K CL D FC C ++ + V
Sbjct: 559 EVKILYYCIAQNGCIERIYQGKLCLPDCIRFCRLCIIKYLIV 684
>gb|CN817979.1|CN817979 HRO4472_H11_O22ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_H11_O22, mRNA sequence
Length = 622
Score = 27.6 bits (54), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYMMLCSQQRIRSSWF 88
FFFFFL + R ++ L +Q + S+ F
Sbjct: 621 FFFFFLDSTRYIDVWFHLMTQVKFPSNAF 535
>gb|CN818259.1|CN818259 HRO4456_H12_O24ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4456_H12_O24, mRNA sequence
Length = 429
Score = 27.6 bits (54), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 752 MHMRGPYVLKIRAILTSRLAPR 817
M +R PY L R ++ LAPR
Sbjct: 88 MRLRSPYTLSTRHVVGQNLAPR 23
>gb|CN818521.1|CN818521 HRO4459_F07_K13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green
leaf Avena sativa cDNA clone HRO4459_F07_K13, mRNA
sequence
Length = 500
Score = 27.6 bits (54), Expect = 5.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 2 FFFFFLQNDRIYTIYMMLCSQ 64
FFFFFL +Y+++CS+
Sbjct: 12 FFFFFLHRK*YIYVYVLMCSR 74
>gb|CN818661.1|CN818661 HRO4457_F10_L19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_F10_L19, mRNA sequence
Length = 781
Score = 27.6 bits (54), Expect = 5.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / +1
Query: 804 GWHHGGNPWSTFQLYACPH 860
GW +P S+F Y CPH
Sbjct: 445 GWAFVADPISSFTEYGCPH 501
>gb|CN818845.1|CN818845 HRO4473_H09_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_H09_XXX, mRNA sequence
Length = 463
Score = 27.6 bits (54), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2 / +2
Query: 752 MHMRGPYVLKIRAILTSRLAPR 817
M +R PY L R ++ LAPR
Sbjct: 305 MRLRSPYTLSTRHVVGQNLAPR 370
>gb|CN818926.1|CN818926 HRO4474_H09_P18ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_H09_P18, mRNA sequence
Length = 636
Score = 27.6 bits (54), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 752 MHMRGPYVLKIRAILTSRLAPR 817
M +R PY L R ++ LAPR
Sbjct: 316 MRLRSPYTLSTRHVVGQNLAPR 251
>gb|CN820515.1|CN820515 HRO4413_C05_E09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_C05_E09, mRNA
sequence
Length = 535
Score = 27.6 bits (54), Expect = 5.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2 / +3
Query: 275 KQGHQKFPCHVRSFILTLLVSGVVAVASWSPKMRL 379
KQGH PCH+ ++T L +G A P + L
Sbjct: 81 KQGHHHDPCHLLLPVVTSL*AGAPPGAEVYPHLGL 185
>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds
Length = 3408
Score = 27.6 bits (54), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 752 MHMRGPYVLKIRAILTSRLAPR 817
M +R PY L R ++ LAPR
Sbjct: 3111 MRLRSPYTLSTRHVVGQNLAPR 3046
>gb|CN818767.1|CN818767 HRO4457_E04_J07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_E04_J07, mRNA sequence
Length = 352
Score = 24.9 bits (48), Expect(2) = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 41 IYMMLCSQQRIRSSWFISNC 100
IYM +CS+ + S +I NC
Sbjct: 271 IYMCMCSELYNQHSTYIHNC 212
Score = 21.7 bits (41), Expect(2) = 5.3
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / -3
Query: 3 FFFFFCK 23
FFFFFC+
Sbjct: 350 FFFFFCR 330
>gb|CN814771.1|CN814771 HRO4502_C11_E22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_C11_E22, mRNA sequence
Length = 789
Score = 27.2 bits (53), Expect = 7.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3 / -3
Query: 6 FFFFCKMTGFIPYI*CYALNKELDHPG 86
FFFF +M FI CY L PG
Sbjct: 787 FFFFFEMLMFIQNTQCYTCISSLTKPG 707
>gb|CN815467.1|CN815467 HRO4512_A03_B06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4512_A03_B06, mRNA sequence
Length = 492
Score = 27.2 bits (53), Expect = 7.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3 / -3
Query: 522 WGRWCPGQPW 551
W RWCP PW
Sbjct: 358 WRRWCPLVPW 329
>gb|CN816292.1|CN816292 HRO4519_B03_D05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4519_B03_D05, mRNA sequence
Length = 538
Score = 27.2 bits (53), Expect = 7.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 2 FFFFFLQNDRIYTIYMML 55
FFFFFLQ + IY+ L
Sbjct: 536 FFFFFLQQKHYHNIYVNL 483
>gb|CN818013.1|CN818013 HRO4472_F03_K06ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_F03_K06, mRNA sequence
Length = 323
Score = 27.2 bits (53), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYMMLCSQQRIRS 79
FFFFF Q+ + +M CS+ IR+
Sbjct: 322 FFFFFFQSRTQRQMEVMKCSEWHIRN 245
>gb|CN818096.1|CN818096 HRO4471_H03_O05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_H03_O05, mRNA sequence
Length = 743
Score = 27.2 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3 / +3
Query: 489 DDPHKRKPDISRAKEFLGWEPKIP 418
D P ++ D S+ + +GW+PK P
Sbjct: 417 DGPLGKRMDNSKTRAEIGWQPKHP 488
>gb|CN818575.1|CN818575 HRO4467_A02_A03ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_A02_A03, mRNA sequence
Length = 618
Score = 27.2 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 489 DDPHKRKPDISRAKEFLGWEPKIP 418
D P ++ + S+ + +GWEPK P
Sbjct: 278 DGPLGKRMENSKTRGDIGWEPKYP 349
>gb|CN819375.1|CN819375 HRO4405_C04_E07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_C04_E07, mRNA
sequence
Length = 653
Score = 27.2 bits (53), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / +3
Query: 257 EQPSS*KQGHQKFPCHVRSFILTLLVSGVVAVASWSPKMRLRKS 388
EQ S+ H+K R +L LL+ GVVA +++ + L ++
Sbjct: 9 EQRSNASWEHEKLAAMARHRLLALLLIGVVAASAFHQRPPLAEA 140
>gb|CN819528.1|CN819528 HRO4401_C01_E01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_C01_E01, mRNA
sequence
Length = 428
Score = 27.2 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3 / +3
Query: 489 DDPHKRKPDISRAKEFLGWEPKIP 418
D P ++ D S+ + +GW+PK P
Sbjct: 57 DGPLGKRMDNSKTRAEIGWQPKHP 128
>gb|CN819865.1|CN819865 HRO4407_A03_B05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_A03_B05, mRNA
sequence
Length = 388
Score = 27.2 bits (53), Expect = 7.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2 / -3
Query: 2 FFFFFLQNDRIYTIYMML 55
FFFFFL+ +++ IY+ +
Sbjct: 386 FFFFFLKRKQLFLIYLFV 333
>gb|CN820605.1|CN820605 HRO4415_D03_H05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_D03_H05, mRNA
sequence
Length = 709
Score = 27.2 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3 / +1
Query: 489 DDPHKRKPDISRAKEFLGWEPKIP 418
D P ++ D S+ + +GW+PK P
Sbjct: 517 DGPLGKRMDNSKTRAEIGWQPKHP 588
>emb|AJ780952.1| Avena vaviloviana partial rga gene for putative resistance protein,
clone VAVIII-8
Length = 463
Score = 27.2 bits (53), Expect = 7.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1 / -1
Query: 1226 GLCLFRFLSNFAYCSLHEISLCFT 1155
GL L S +YC L++ SLC T
Sbjct: 148 GL*LITLFSGHSYCLLYQPSLCVT 77
>gb|CN820540.1|CN820540 HRO4413_E09_I17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_E09_I17, mRNA
sequence
Length = 513
Score = 24.9 bits (48), Expect(2) = 7.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 41 IYMMLCSQQRIRSSWFISNC 100
IYM +CS+ + S +I NC
Sbjct: 432 IYMCMCSELYNQHSTYIHNC 373
Score = 21.7 bits (41), Expect(2) = 7.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / -3
Query: 3 FFFFFCK 23
FFFFFC+
Sbjct: 511 FFFFFCR 491
>gb|CN817885.1|CN817885 HRO4459_C06_E11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_C06_E11, mRNA sequence
Length = 554
Score = 24.9 bits (48), Expect(2) = 8.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 41 IYMMLCSQQRIRSSWFISNC 100
IYM +CS+ + S +I NC
Sbjct: 472 IYMCMCSELYNQHSTYIHNC 413
Score = 21.7 bits (41), Expect(2) = 8.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / -1
Query: 3 FFFFFCK 23
FFFFFC+
Sbjct: 551 FFFFFCR 531
>gb|CN819919.1|CN819919 HRO4407_H03_P05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H03_P05, mRNA
sequence
Length = 780
Score = 25.4 bits (49), Expect(2) = 8.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 284 HQKFPCHVRSFILTLLV 334
H F C+ RSF+L +L+
Sbjct: 259 HNSFRCYRRSFVLPVLI 209
Score = 21.7 bits (41), Expect(2) = 8.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 392 TMRGRPSRRG 421
T RGRP RRG
Sbjct: 58 TERGRPRRRG 29
>gb|CN814987.1|CN814987 HRO4504_F05_L10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_F05_L10, mRNA sequence
Length = 491
Score = 26.7 bits (52), Expect = 9.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 3 FFFFFCKMTGFI 38
FFFFFCK T +I
Sbjct: 489 FFFFFCKNTRYI 454
>gb|CN815265.1|CN815265 HRO4507_G06_N11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4507_G06_N11, mRNA sequence
Length = 558
Score = 26.7 bits (52), Expect = 9.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 184 CNAILFFPCIFSFSVLSVLSYT 119
C A+ PC+F+ VL VL ++
Sbjct: 420 CGAVFCIPCLFALKVL*VLLWS 485
>gb|CN815297.1|CN815297 HRO4508_B05_D10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4508_B05_D10, mRNA sequence
Length = 549
Score = 26.7 bits (52), Expect = 9.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 373 HLRRPRRYCHHPGNQQ 326
+LRR RR CHH QQ
Sbjct: 359 NLRRNRRCCHHSVEQQ 312
>gb|CN816271.1|CN816271 HRO4518_H03_O06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root
Avena sativa cDNA clone HRO4518_H03_O06, mRNA sequence
Length = 831
Score = 26.7 bits (52), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2 / +3
Query: 2 FFFFFLQNDRIYTIYMMLCSQQR 70
FFFFF ++ R + ++ L QQR
Sbjct: 27 FFFFFFKSIRRHPAFISLTGQQR 95
>gb|CN816624.1|CN816624 HRO4522_H12_O24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4522_H12_O24, mRNA sequence
Length = 836
Score = 26.7 bits (52), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -3
Query: 482 GSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPT 604
G+S +L S ++GS V W S +S L NGPT
Sbjct: 141 GASSSWLGESRPSVGSSVGWVKRHYPSTNSSAKLKSSNGPT 19
>gb|CN816784.1|CN816784 HRO4524_G03_N06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4524_G03_N06, mRNA sequence
Length = 530
Score = 26.7 bits (52), Expect = 9.6
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 3 FFFFFCKMTGFIP 41
FFFFFCK++ + P
Sbjct: 528 FFFFFCKISNY*P 490
>gb|CN818618.1|CN818618 HRO4467_C08_E15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_C08_E15, mRNA sequence
Length = 481
Score = 26.7 bits (52), Expect = 9.6
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 2 FFFFFLQNDRIYTIY 46
FFFFFL+ ++++ IY
Sbjct: 481 FFFFFLKQNKLHQIY 437
>gb|CN818646.1|CN818646 HRO4467_E06_I11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_E06_I11, mRNA sequence
Length = 579
Score = 26.7 bits (52), Expect = 9.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYMMLCS 61
FFFFFL + IY +LC+
Sbjct: 578 FFFFFLSAKQFK*IYKLLCN 519
>gb|CN820300.1|CN820300 HRO4417_G10_M19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_G10_M19, mRNA
sequence
Length = 575
Score = 26.7 bits (52), Expect = 9.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 373 HLRRPRRYCHHPGNQQ 326
+LRR RR CHH QQ
Sbjct: 395 NLRRNRRCCHHSVEQQ 348
>gb|CN821000.1|CN821000 HRO4422_D07_G14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_D07_G14, mRNA
sequence
Length = 502
Score = 26.7 bits (52), Expect = 9.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2 / -3
Query: 479 CGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
C SS +S A S+ SW + ASSS +S L L +C
Sbjct: 302 CFSSSD*SSSSDTAFSSLSSWLSSASSSSKSSSSLALLASSSC 174
>gb|CN821044.1|CN821044 HRO4422_H07_O14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_H07_O14, mRNA
sequence
Length = 502
Score = 26.7 bits (52), Expect = 9.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2 / -1
Query: 479 CGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
C SS +S A S+ SW + ASSS +S L L +C
Sbjct: 301 CFSSSD*SSSSDTAFSSLSSWLSSASSSSKSSSSLALLASSSC 173
>gb|CN821272.1|CN821272 HRO4423_D11_H21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_D11_H21, mRNA
sequence
Length = 469
Score = 26.7 bits (52), Expect = 9.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -2
Query: 2 FFFFFLQNDRIYTIYM 49
FFFFFL Y +YM
Sbjct: 468 FFFFFLDTSNHYKVYM 421
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 18,107,872
Number of Sequences: 8143
Number of extensions: 277630
Number of successful extensions: 1792
Number of sequences better than 10.0: 63
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 535669192
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)