TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1716368.2.1
         (1356 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN820496.1|CN820496  HRO4413_A07_A13ZS5 Lib AA069E1X Aven...   122   1e-028
>gb|CN820496.1|CN820496 HRO4413_A07_A13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4413_A07_A13, mRNA
           sequence
          Length = 642

 Score =  122 bits (262), Expect = 1e-028
 Identities = 46/85 (54%), Positives = 61/85 (71%)
 Frame = -1 / +1

                                                                       
Query: 591 YFDVLIEFEDDDGDLSAVDLMEAGSGVWTPMAHNWGATWRLNNGRKLKAPFGLRLTSDSR 412
           Y  VLIE+ED DGDL+ VD+ EA S  W PM  +WG+ WR+++  +L+APF +R+TSDS 
Sbjct: 1   YLAVLIEYEDMDGDLTQVDMKEANSRSWAPMRESWGSIWRMDSNHRLQAPFSMRITSDSG 180

                                    
Query: 411 RVLVANNAIPAAWKPGKTYRSLVNY 337
           + LVANN IPA W+P   YRS V +
Sbjct: 181 KQLVANNIIPANWRPNTDYRSFVQF 255
  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 13,031,501
Number of Sequences: 8143
Number of extensions: 165008
Number of successful extensions: 1307
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 492142365
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)