TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131537.2.451
         (1101 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN821627.1|CN821627  HRO4408_D09_H18ZS5 Lib AA069E1X Aven...   237   2e-063

>gb|CN821627.1|CN821627 HRO4408_D09_H18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4408_D09_H18, mRNA
           sequence
          Length = 657

 Score =  237 bits (513), Expect = 2e-063
 Identities = 106/127 (83%), Positives = 107/127 (84%)
 Frame = +2 / +2

                                                                       
Query: 404 VSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYR 583
           VSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYR
Sbjct: 2   VSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVNTYR 181

                                                                       
Query: 584 RTFTTKNGKKVSKAPKIQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKE 763
           RTFT K GKKVSKAPKIQRLVTPLTLQ                 SEAA+YQKLLAQRLKE
Sbjct: 182 RTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIAQKKQRIVKKKSEAADYQKLLAQRLKE 361

                  
Query: 764 QRDRRSE 784
           QRDRRSE
Sbjct: 362 QRDRRSE 382




 Score =  126 bits (269), Expect = 8e-030
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -3 / -3

                                                                       
Query: 670 LPLEGQGCHKPLDLRCLADLLAVLGSECPAVCVHVLAYIIILVKVEQLSDLGGPLGTPHP 491
           LPLEGQ  H+PLDL   A LLA+L  EC AV V +LA IIIL KVE L DLG PLG+PHP
Sbjct: 268 LPLEGQWSHQPLDLGSFAHLLALLVRECSAVSVDILANIIILSKVE*LPDLGCPLGSPHP 89

                                       
Query: 490 WLLSVSQTRQIILTLLHNHQVDNR*VLA 407
            LL V Q R+IILTLL++HQVD+R VLA
Sbjct: 88  GLLGVGQAREIILTLLNDHQVDDREVLA 5




 Score =  124 bits (266), Expect(2) = 8e-043
 Identities = 52/86 (60%), Positives = 67/86 (77%)
 Frame = +1 / +1

                                                                       
Query: 406 EPRPICYQLGDCEEG*E*SAWSD*H*EAKDEGSQEGLQDQKAVQP*QG**CTQVREHIPQ 585
           +P P+C+Q GD  EG*E*S W D H EA+DEG+QEG+QDQ+ +QP  G**C+QV +H+PQ
Sbjct: 4   QPGPLCHQPGDR*EG*E*SPWLDRHREAQDEGTQEGIQDQEVIQPC*G**CSQVCQHLPQ 183

                                     
Query: 586 DIHYQERQEGQQGT*DPTACDTLDPP 663
           +IH QE QEG+Q + DP A D+ DPP
Sbjct: 184 NIHEQEGQEGEQSSQDPEAGDSTDPP 261




 Score =  113 bits (242), Expect(3) = 5e-043
 Identities = 50/62 (80%), Positives = 50/62 (80%)
 Frame = -1 / -1

                                                                       
Query: 750 WARSFWYSAASDFFLVILFFLSAILARFLWRVKGVTSRWILGALLTFLPFLVVNVLRYVF 571
           WA SFW SAASDFFL IL F  AILA FLWRV GVTS WILGALLTFLPFL VNVLR V 
Sbjct: 348 WASSFW*SAASDFFLTILCFFWAILALFLWRVSGVTSLWILGALLTFLPFLFVNVLR*VL 169

             
Query: 570 TY 565
           TY
Sbjct: 168 TY 163




 Score = 96.8 bits (205), Expect = 6e-021
 Identities = 55/86 (63%), Positives = 58/86 (67%)
 Frame = +3 / +3

                                                                       
Query: 411 KTYLLSTW*L*RRVRMICLV*LTLRSQG*GVPRGPPRSESCSTLTRMMMYAST*THTAGH 590
           +T L STW*  RRVRMI L * T RS G*G PRG PRS S STL RMMM+AS  T TA H
Sbjct: 9   RTSLSSTW*SLRRVRMISLA*PTPRSPG*GDPRGHPRSGSYSTLLRMMMFASMSTLTAEH 188

                                     
Query: 591 SLPRTARRSARHLRSNGL*HP*PSRG 668
           S  R ARR A+  RS G *  *PSRG
Sbjct: 189 SRTRRARR*AKLPRSRGW*LH*PSRG 266




 Score = 64.8 bits (135), Expect(2) = 8e-043
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +1 / +1

                                                    
Query: 715 V*GC*VPEASCPEAEGTEGPPERELGQEEVQAFCRRQGFCC 837
           V*GC*+P+A+ PEA+G EGPPERELG EEVQAF  +   CC
Sbjct: 313 V*GC*LPKAARPEAQGAEGPPERELG*EEVQAFHCQGCPCC 435




 Score = 60.6 bits (126), Expect(3) = 5e-043
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -1 / -1

                                       
Query: 486 FSVSVRPGRSFSPFFTITKLITDRSWLT 403
           FSVSV+PGRSFSPF TIT+L+T+RSWLT
Sbjct: 84  FSVSVKPGRSFSPFLTITRLMTERSWLT 1




 Score = 34.1 bits (68), Expect(3) = 5e-043
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3 / -3

                            
Query: 790 QALAPAVPLFLQPLGKK 740
           QALAPAVPL L+PLG++
Sbjct: 388 QALAPAVPLLLEPLGEQ 338



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 10,435,147
Number of Sequences: 8143
Number of extensions: 135761
Number of successful extensions: 737
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 389360790
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)