TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131537.2.405
         (1589 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN815233.1|CN815233  HRO4507_D04_H07ZS5 Lib AA071E1X Aven...   301   2e-082

>gb|CN815233.1|CN815233 HRO4507_D04_H07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4507_D04_H07, mRNA sequence
          Length = 654

 Score =  301 bits (652), Expect = 2e-082
 Identities = 129/159 (81%), Positives = 137/159 (86%)
 Frame = -3 / +3

                                                                       
Query: 897 LANDAKAAKKGGERQFNGLVDVYRKTLASDGIRGLYRGFNISCVGIIVYRGLYFGMYDSL 718
           LANDAKA+K GGERQFNGLVDVYRKTL +DGI GLYRGFNISCVGIIVYRGLYFG+YDSL
Sbjct: 3   LANDAKASKGGGERQFNGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSL 182

                                                                       
Query: 717 KPVLLVGTLQDNFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQ 538
           KPVLL GTLQDNF ASF LGW IT GAGLASYPIDTVRRRMMMTSGEAVKY SS DAF+Q
Sbjct: 183 KPVLLTGTLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFQQ 362

                                                  
Query: 537 IVAKEGTKSLFKGAGANILRXXXXXXXXXGYDKLQVVVF 421
           I+ KEG KSLFKGAGANILR         GYD+LQ++ F
Sbjct: 363 ILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 479




 Score =  217 bits (469), Expect = 3e-057
 Identities = 100/131 (76%), Positives = 107/131 (81%)
 Frame = +2 / -3

                                                                       
Query: 503 LKRDLVPSFATICLKASKELLYLTASPDVIIMRRRTVSMG*EARPAPMVIPHPSKKLAKK 682
           LKRDL PSF  IC KAS ELLYLTASP+VII+  RTVSMG*+ARPAP+VI  P  KLAKK
Sbjct: 397 LKRDLAPSFFRICWKASNELLYLTASPEVIIILLRTVSMG*DARPAPLVINQPRAKLAKK 218

                                                                       
Query: 683 LSCRVPTRSTGFRESYIPK*RPRYTMIPTQDILNPR*RPRIPSLARVLR*TSTSPLNCLS 862
           LS RVP R TGFRESY PK RPR TMIPTQ++LNPR* P IPS+ RVLR*TST PLNCLS
Sbjct: 217 LSWRVPVRRTGFRESYNPKYRPR*TMIPTQEMLNPR*SPAIPSVLRVLR*TSTRPLNCLS 38

                      
Query: 863 PPFFAALASLA 895
           PP   ALASLA
Sbjct: 37  PPPLDALASLA 5




 Score =  195 bits (420), Expect = 2e-050
 Identities = 89/171 (52%), Positives = 123/171 (71%)
 Frame = +1 / -2

                                                                       
Query: 385 TSLATTRPVLLAEDNHLELVVPSKDTSTSYSAEDVCASTLEEGLGTLLCDNLLESVQGAV 564
           ++L T   VLLAE+  L+LV+  K TSTS   EDV  STLEEGL TLL  +LLES++ A+
Sbjct: 515 STLGTA*AVLLAEEEDLKLVIARKHTSTSNGTEDVGTSTLEEGLSTLLLQDLLESIE*AL 336

                                                                       
Query: 565 VLDGLTRCHHHATANSVNGVGGKASTNGYTPPEQEAG*EVILQGTNKKHWLQGVIHTKVK 744
           VLDG +R HHH +A+ VNGV  K  T G  P + +AG EV+L+  ++++WLQ +I +KV+
Sbjct: 335 VLDGFSRGHHHPSADGVNGVRCKTCTVGDQPTKSKAGKEVVLESASEENWLQRIIQSKVQ 156

                                                              
Query: 745 TSVHNDPHTRYIESTVEATNTITGKGLAVNINESIELPLTTLLCSLGIIGQ 897
           T+V ND +T  +ESTV+ +NTI  + LAV+IN++IELPLT+ L  L +IGQ
Sbjct: 155 TTVDNDSNTGDVESTVKPSNTICLESLAVDINKAIELPLTSTLRCLSVIGQ 3




 Score =  166 bits (356), Expect = 1e-041
 Identities = 68/126 (53%), Positives = 84/126 (66%)
 Frame = -2 / +2

                                                                       
Query: 862 *EAVQWTR*CLPQDPCQ*WYSWPLPWIQYILCGDHCVPRSLLWYV*LPEASASCWYPAG* 683
           *EAVQW  *CLPQD    WY W LPWIQ++LC +HC+P S+LW V*  EAS+  W+  G 
Sbjct: 38  *EAVQWPC*CLPQDSQDRWYCWALPWIQHLLCWNHCLPWSVLWIV*FSEASSPHWHSPGQ 217

                                                                       
Query: 682 LLSQLLARVGYNHWCWPCLLPH*HCSPSHDDDIW*GRQVQQLLGRFQADCRKGGYQVPLQ 503
           LL QL + +  +  C  C+LPH*H     DDD+W  RQVQ+L+  F AD  +GG  VPLQ
Sbjct: 218 LLCQLCSWLVDHQRCRSCILPH*HRPQKDDDDLWRSRQVQELIRCFPADPEEGGC*VPLQ 397

                 
Query: 502 GCWRKH 485
           GCW +H
Sbjct: 398 GCWCQH 415




 Score =  139 bits (298), Expect = 1e-033
 Identities = 67/134 (50%), Positives = 79/134 (58%)
 Frame = +3 / -1

                                                                       
Query: 495 QHP*RGTWYPPLRQSA*KRPRSCCT*RPHQMSSSCDGEQCQWGRRQGQHQWLYPTRARSW 674
           QHP*RGT +PP   SA K   S CT*R  Q SSS    +CQWG+ Q  H+W    + +SW
Sbjct: 405 QHP*RGT*HPPSSGSAGKHRMSSCT*RLLQRSSSSFCGRCQWGKMQDLHRW*STNQEQSW 226

                                                                       
Query: 675 LRSYPAGYQQEALASGSHTYQSKDLGTQ*SPHKIY*IHGRGHEYHHWQGSCGKHQRVH*T 854
            RS P   Q   LAS +HT QS D G Q*  H+  *IHG+  +YH    SCG+HQ+ H*T
Sbjct: 225 QRSCPGECQ*GELASENHTIQSTDHGRQ*FQHRRC*IHGKAQQYHLS*ESCGRHQQGH*T 46

                         
Query: 855 ASHHPSLQPWHHWP 896
           ASH     P  HWP
Sbjct: 45  ASHLHP*MP*RHWP 4



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 17,219,808
Number of Sequences: 8143
Number of extensions: 263711
Number of successful extensions: 1254
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 581309168
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)