TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN28g01.yg.2.1
(513 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 250 2e-065
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 244 2e-063
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 244 2e-063
emb|AX412747.1| Sequence 511 from Patent WO0222675 156 3e-058
emb|AX508002.1| Sequence 2697 from Patent WO0216655 156 3e-058
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 218 8e-056
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 218 8e-056
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 218 8e-056
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 171 3e-051
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 174 1e-050
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 90 2e-049
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 90 2e-049
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 90 2e-049
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 125 4e-048
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 114 1e-047
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 161 1e-047
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 94 3e-046
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 149 1e-044
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 149 2e-044
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 149 2e-044
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 149 2e-044
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 149 2e-044
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 149 2e-044
emb|AX506240.1| Sequence 935 from Patent WO0216655 149 2e-044
gb|BX841223.1|BX841223 BX841223 Arabidopsis thaliana Flower... 178 8e-044
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 140 8e-042
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 140 8e-042
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 140 8e-042
emb|AX059538.1| Sequence 271 from Patent WO0055325 140 8e-042
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 140 8e-042
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 153 9e-039
emb|AX651854.1| Sequence 720 from Patent WO03000898 153 9e-039
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 89 9e-039
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 88 1e-036
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 88 1e-036
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 89 6e-035
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 149 8e-035
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 73 6e-034
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 89 2e-033
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 84 3e-032
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 84 4e-032
gb|AQ956062.1|AQ956062 LERAH21TR LERA Arabidopsis thaliana ... 84 1e-031
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 68 8e-026
emb|AL806921.1| Arabidopsis thaliana transposon insertion S... 87 4e-024
emb|AJ523390.1|ATH523390 Arabidopsis thaliana T-DNA flankin... 89 4e-023
emb|AJ522898.1|ATH522898 Arabidopsis thaliana T-DNA flankin... 89 4e-023
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 250 bits (541), Expect = 2e-065
Identities = 103/135 (76%), Positives = 116/135 (85%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MPDAPK+R ML FSVLTPYY EDVLF
Sbjct: 3130 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPDAPKIRNMLSFSVLTPYYSEDVLF 3309
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +QNEDGVSILFYLQKI+PDEW NFLERV C SE++L E EE+LRLWASYRG
Sbjct: 3310 SIFGLEKQNEDGVSILFYLQKIFPDEWTNFLERVKCGSEEELRAREELEEELRLWASYRG 3489
Query: 135 QTLTRTVRGMMYQER 91
QTLT+TVRGMMY +
Sbjct: 3490 QTLTKTVRGMMYYRK 3534
Score = 128 bits (275), Expect = 9e-029
Identities = 65/129 (50%), Positives = 74/129 (57%)
Frame = +2 / -2
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YI+P TVLV V P DA RR +KF HSSG IFCK*K +ET
Sbjct: 3524 YIMPRTVLVSVWPL*DAHRRSSSSNSSLALSSSSLPHFTRSKKFVHSSGKIFCK*KSIET 3345
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSFC + E RTSS * GV+TEK ++ R GASGI + E K L AS+ GTS
Sbjct: 3344 PSSFCFSKPKMENRTSSE*YGVRTEKESMLRILGASGISMNNEFEKNVSRLRASKLDGTS 3165
Query: 461 IADSFTVSK 487
IADS TVSK
Sbjct: 3164 IADSLTVSK 3138
Score = 113 bits (241), Expect = 4e-024
Identities = 57/135 (42%), Positives = 76/135 (56%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S+S Q L+ V CP+ K LF++ S E F T H F+K+ P IW D LQ+K+
Sbjct: 3528 VIHHASHSFGQCLASVRCPQTKFLFQLFSCSEFFFAATFHAFQKVCPLIWKDLLQVKEYR 3349
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
+S+ IL E NI I+ DR+G+H+ F I H H+ I KE PSS QV
Sbjct: 3348 DSIFILLLQTKNGE*NIL*IVWC*DRKGKHVADFGGIRHFHE**I*KECKSPSSFQVGWH 3169
Query: 457 IHSRFLHRE*KSKSL 501
IHSR +*K K L
Sbjct: 3168 IHSRLFDSK*KMKPL 3124
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 244 bits (527), Expect = 2e-063
Identities = 100/135 (74%), Positives = 115/135 (85%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FSVLTPY+ EDVLF
Sbjct: 3112 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSEDVLF 3291
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +QNEDGVSILFYLQKI+PDEW NFLERV C +E++L E EE+LRLWASYRG
Sbjct: 3292 SIFGLEQQNEDGVSILFYLQKIFPDEWTNFLERVKCGNEEELRAREDLEEELRLWASYRG 3471
Query: 135 QTLTRTVRGMMYQER 91
QTLT+TVRGMMY +
Sbjct: 3472 QTLTKTVRGMMYYRK 3516
Score = 133 bits (285), Expect = 4e-030
Identities = 67/129 (51%), Positives = 76/129 (58%)
Frame = +2 / -3
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YIIP TVLV+V P DAQRR RKF HSSG IFCK*K +ET
Sbjct: 3506 YIIPRTVLVRVWPL*DAQRRSSSSKSSLALSSSSLPHLTRSRKFVHSSGKIFCK*KSIET 3327
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSFC + EKRTSS GV+TEK ++ R GA G+ + E KK L AS+ GTS
Sbjct: 3326 PSSFCCSKPNMEKRTSSEKYGVRTEKESMLRILGAGGMSMNSEFEKKVRRLRASKLDGTS 3147
Query: 461 IADSFTVSK 487
IADS TVSK
Sbjct: 3146 IADSLTVSK 3120
Score = 117 bits (250), Expect = 3e-025
Identities = 60/135 (44%), Positives = 79/135 (58%)
Frame = +1 / -2
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S+S QSL+ V CPK KLLF++LS F T + F+K+ PFIW D LQ+K+
Sbjct: 3510 VIHHSSHSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFIWEDLLQVKEYR 3331
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
NS+ IL * EKNI + +DREG+H+ H H+ I KE PSS QV +
Sbjct: 3330 NSIFILLF*AKYGEKNIL*KVWCKDREGKHVADLGCRRHVHE**I*KESKTPSSFQVGWN 3151
Query: 457 IHSRFLHRE*KSKSL 501
IHS L + K K L
Sbjct: 3150 IHS*LLDSKQKMKPL 3106
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 244 bits (527), Expect = 2e-063
Identities = 100/135 (74%), Positives = 115/135 (85%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FSVLTPY+ EDVLF
Sbjct: 3112 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSEDVLF 3291
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +QNEDGVSILFYLQKI+PDEW NFLERV C +E++L E EE+LRLWASYRG
Sbjct: 3292 SIFGLEQQNEDGVSILFYLQKIFPDEWTNFLERVKCGNEEELRAREDLEEELRLWASYRG 3471
Query: 135 QTLTRTVRGMMYQER 91
QTLT+TVRGMMY +
Sbjct: 3472 QTLTKTVRGMMYYRK 3516
Score = 133 bits (285), Expect = 4e-030
Identities = 67/129 (51%), Positives = 76/129 (58%)
Frame = +2 / -3
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YIIP TVLV+V P DAQRR RKF HSSG IFCK*K +ET
Sbjct: 3506 YIIPRTVLVRVWPL*DAQRRSSSSKSSLALSSSSLPHLTRSRKFVHSSGKIFCK*KSIET 3327
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSFC + EKRTSS GV+TEK ++ R GA G+ + E KK L AS+ GTS
Sbjct: 3326 PSSFCCSKPNMEKRTSSEKYGVRTEKESMLRILGAGGMSMNSEFEKKVRRLRASKLDGTS 3147
Query: 461 IADSFTVSK 487
IADS TVSK
Sbjct: 3146 IADSLTVSK 3120
Score = 117 bits (250), Expect = 3e-025
Identities = 60/135 (44%), Positives = 79/135 (58%)
Frame = +1 / -2
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S+S QSL+ V CPK KLLF++LS F T + F+K+ PFIW D LQ+K+
Sbjct: 3510 VIHHSSHSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFIWEDLLQVKEYR 3331
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
NS+ IL * EKNI + +DREG+H+ H H+ I KE PSS QV +
Sbjct: 3330 NSIFILLF*AKYGEKNIL*KVWCKDREGKHVADLGCRRHVHE**I*KESKTPSSFQVGWN 3151
Query: 457 IHSRFLHRE*KSKSL 501
IHS L + K K L
Sbjct: 3150 IHS*LLDSKQKMKPL 3106
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 156 bits (335), Expect(2) = 3e-058
Identities = 65/84 (77%), Positives = 74/84 (88%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FSVLTPY+ EDVLF
Sbjct: 2926 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSEDVLF 3105
Query: 315 SSQALAEQNEDGVSILFYLQKIYP 244
S L +QNEDGVSILFYLQKI+P
Sbjct: 3106 SIFGLEQQNEDGVSILFYLQKIFP 3177
Score = 92.7 bits (196), Expect(2) = 1e-029
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2 / -2
Query: 245 G*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKD 424
G IFCK*K +ETPSSFC + EKRTSS GV+TEK ++ R GA G+ + E KK
Sbjct: 3176 GKIFCK*KSIETPSSFCCSKPNMEKRTSSEKYGVRTEKESMLRILGAGGMSMNSEFEKKV 2997
Query: 425 ILLLASRFVGTSIADSFTVSK 487
L AS+ GTSIADS TVSK
Sbjct: 2996 RRLRASKLDGTSIADSLTVSK 2934
Score = 90.9 bits (192), Expect(2) = 3e-058
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -1 / +1
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVRGMMYQER 91
DEW NFLERV C +E++L E EE+LRLWASYRGQTLT+TVRGMMY +
Sbjct: 3217 DEWTNFLERVKCGNEEELRAREDLEEELRLWASYRGQTLTKTVRGMMYYRK 3369
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFI 243
++HH S+S QSL+ V CPK KLLF++LS F T + F+K+ PFI
Sbjct: 3363 VIHHSSHSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFI 3217
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 156 bits (335), Expect(2) = 3e-058
Identities = 65/84 (77%), Positives = 74/84 (88%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FSVLTPY+ EDVLF
Sbjct: 2926 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSEDVLF 3105
Query: 315 SSQALAEQNEDGVSILFYLQKIYP 244
S L +QNEDGVSILFYLQKI+P
Sbjct: 3106 SIFGLEQQNEDGVSILFYLQKIFP 3177
Score = 92.7 bits (196), Expect(2) = 1e-029
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2 / -2
Query: 245 G*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKD 424
G IFCK*K +ETPSSFC + EKRTSS GV+TEK ++ R GA G+ + E KK
Sbjct: 3176 GKIFCK*KSIETPSSFCCSKPNMEKRTSSEKYGVRTEKESMLRILGAGGMSMNSEFEKKV 2997
Query: 425 ILLLASRFVGTSIADSFTVSK 487
L AS+ GTSIADS TVSK
Sbjct: 2996 RRLRASKLDGTSIADSLTVSK 2934
Score = 90.9 bits (192), Expect(2) = 3e-058
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -1 / +1
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVRGMMYQER 91
DEW NFLERV C +E++L E EE+LRLWASYRGQTLT+TVRGMMY +
Sbjct: 3217 DEWTNFLERVKCGNEEELRAREDLEEELRLWASYRGQTLTKTVRGMMYYRK 3369
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFI 243
++HH S+S QSL+ V CPK KLLF++LS F T + F+K+ PFI
Sbjct: 3363 VIHHSSHSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFI 3217
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 218 bits (471), Expect = 8e-056
Identities = 90/135 (66%), Positives = 107/135 (79%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVPTNL+A+RRI+FF NSLFM MP AP+VR ML FSVLTPYY E+ ++
Sbjct: 3079 LHLLLTVKESAMDVPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSFSVLTPYYSEETVY 3258
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +NEDGVS+++YLQKI+PDEW NFLER+ C+ E + E+E + QLR W S RG
Sbjct: 3259 SKNDLEMENEDGVSVVYYLQKIFPDEWTNFLERLDCKDETSVLESEENILQLRHWVSLRG 3438
Query: 135 QTLTRTVRGMMYQER 91
QTL RTVRGMMY R
Sbjct: 3439 QTLFRTVRGMMYYRR 3483
Score = 125 bits (268), Expect = 8e-028
Identities = 67/132 (50%), Positives = 74/132 (56%)
Frame = +2 / -2
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YIIPLTVL KVCP + Q R +K HSSG IFCK* +T
Sbjct: 3473 YIIPLTVLNKVCPLKETQWRSCNIFSSLSKTEVSSLQSSRSKKLVHSSGKIFCK*YTTDT 3294
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSF + + E SSL* GV+T K +I T GA GI I E KK ILL ASRFVGTS
Sbjct: 3293 PSSFSISRSFLE*TVSSL*YGVRTLKDSIFLTRGARGISINSEFVKKAILLCASRFVGTS 3114
Query: 461 IADSFTVSKSRR 496
IADSFTV R
Sbjct: 3113 IADSFTVKSK*R 3078
Score = 104 bits (222), Expect = 2e-021
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S S QSLSP P AKL + +L F T+ P +++ P IW D LQI +
Sbjct: 3477 VIHHSSNCSKQSLSPQRNPMAKLQYIFFTLQNRSFIFTIKPLQEVSPLIWKDLLQIVYN* 3298
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
++ IL + R I+RSQ+ EGQH+ S WH HK+ I +E P +VC +
Sbjct: 3297 YTIFILHFQVVLRVDGFLTIVRSQNTEGQHISDTRSSWHIHKQ*ICEEGNPSLCFKVCWN 3118
Query: 457 IHSRFLHRE 483
IH RF +R+
Sbjct: 3117 IHCRFFYRQ 3091
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 218 bits (471), Expect = 8e-056
Identities = 90/135 (66%), Positives = 107/135 (79%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVPTNL+A+RRI+FF NSLFM MP AP+VR ML FSVLTPYY E+ ++
Sbjct: 3232 LHLLLTVKESAMDVPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSFSVLTPYYSEETVY 3411
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +NEDGVS+++YLQKI+PDEW NFLER+ C+ E + E+E + QLR W S RG
Sbjct: 3412 SKNDLEMENEDGVSVVYYLQKIFPDEWTNFLERLDCKDETSVLESEENILQLRHWVSLRG 3591
Query: 135 QTLTRTVRGMMYQER 91
QTL RTVRGMMY R
Sbjct: 3592 QTLFRTVRGMMYYRR 3636
Score = 125 bits (268), Expect = 8e-028
Identities = 67/132 (50%), Positives = 74/132 (56%)
Frame = +2 / -3
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YIIPLTVL KVCP + Q R +K HSSG IFCK* +T
Sbjct: 3626 YIIPLTVLNKVCPLKETQWRSCNIFSSLSKTEVSSLQSSRSKKLVHSSGKIFCK*YTTDT 3447
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSF + + E SSL* GV+T K +I T GA GI I E KK ILL ASRFVGTS
Sbjct: 3446 PSSFSISRSFLE*TVSSL*YGVRTLKDSIFLTRGARGISINSEFVKKAILLCASRFVGTS 3267
Query: 461 IADSFTVSKSRR 496
IADSFTV R
Sbjct: 3266 IADSFTVKSK*R 3231
Score = 104 bits (222), Expect = 2e-021
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = +1 / -2
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S S QSLSP P AKL + +L F T+ P +++ P IW D LQI +
Sbjct: 3630 VIHHSSNCSKQSLSPQRNPMAKLQYIFFTLQNRSFIFTIKPLQEVSPLIWKDLLQIVYN* 3451
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
++ IL + R I+RSQ+ EGQH+ S WH HK+ I +E P +VC +
Sbjct: 3450 YTIFILHFQVVLRVDGFLTIVRSQNTEGQHISDTRSSWHIHKQ*ICEEGNPSLCFKVCWN 3271
Query: 457 IHSRFLHRE 483
IH RF +R+
Sbjct: 3270 IHCRFFYRQ 3244
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 218 bits (471), Expect = 8e-056
Identities = 90/135 (66%), Positives = 107/135 (79%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESAMDVPTNL+A+RRI+FF NSLFM MP AP+VR ML FSVLTPYY E+ ++
Sbjct: 3079 LHLLLTVKESAMDVPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSFSVLTPYYSEETVY 3258
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRG 136
S L +NEDGVS+++YLQKI+PDEW NFLER+ C+ E + E+E + QLR W S RG
Sbjct: 3259 SKNDLEMENEDGVSVVYYLQKIFPDEWTNFLERLDCKDETSVLESEENILQLRHWVSLRG 3438
Query: 135 QTLTRTVRGMMYQER 91
QTL RTVRGMMY R
Sbjct: 3439 QTLFRTVRGMMYYRR 3483
Score = 125 bits (268), Expect = 8e-028
Identities = 67/132 (50%), Positives = 74/132 (56%)
Frame = +2 / -2
Query: 101 YIIPLTVLVKVCPRYDAQRRXXXXXXXXXXXXXXXXXXXXXRKFFHSSG*IFCK*KRMET 280
YIIPLTVL KVCP + Q R +K HSSG IFCK* +T
Sbjct: 3473 YIIPLTVLNKVCPLKETQWRSCNIFSSLSKTEVSSLQSSRSKKLVHSSGKIFCK*YTTDT 3294
Query: 281 PSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAKKDILLLASRFVGTS 460
PSSF + + E SSL* GV+T K +I T GA GI I E KK ILL ASRFVGTS
Sbjct: 3293 PSSFSISRSFLE*TVSSL*YGVRTLKDSIFLTRGARGISINSEFVKKAILLCASRFVGTS 3114
Query: 461 IADSFTVSKSRR 496
IADSFTV R
Sbjct: 3113 IADSFTVKSK*R 3078
Score = 104 bits (222), Expect = 2e-021
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIWVDFLQIKKDG 276
++HH S S QSLSP P AKL + +L F T+ P +++ P IW D LQI +
Sbjct: 3477 VIHHSSNCSKQSLSPQRNPMAKLQYIFFTLQNRSFIFTIKPLQEVSPLIWKDLLQIVYN* 3298
Query: 277 NSVLILFC*CL*REKNIFFIIRSQDREGQHLPHFWSIWHRHKKRISKERYPPSSIQVCRD 456
++ IL + R I+RSQ+ EGQH+ S WH HK+ I +E P +VC +
Sbjct: 3297 YTIFILHFQVVLRVDGFLTIVRSQNTEGQHISDTRSSWHIHKQ*ICEEGNPSLCFKVCWN 3118
Query: 457 IHSRFLHRE 483
IH RF +R+
Sbjct: 3117 IHCRFFYRQ 3091
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 171 bits (369), Expect(2) = 3e-051
Identities = 67/95 (70%), Positives = 86/95 (90%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVKESA+++P +L+ARRR++FFANSLFM+MPDAP+VR ML FSVLTPYYKEDVL+
Sbjct: 3109 LLLLLTVKESAINIPQSLEARRRMTFFANSLFMNMPDAPRVRDMLSFSVLTPYYKEDVLY 3288
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVH 211
S + L ++NEDG++ILFYLQ+IYP+EW N+ ERV+
Sbjct: 3289 SEEELNKENEDGITILFYLQRIYPEEWSNYCERVN 3393
Score = 51.9 bits (107), Expect(2) = 3e-051
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / +1
Query: 168 EQLRLWASYRGQTLTRTVRGMMY 100
EQLR W SYRGQTL+RTVRGMMY
Sbjct: 3430 EQLRQWVSYRGQTLSRTVRGMMY 3498
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 174 bits (375), Expect(2) = 1e-050
Identities = 69/94 (73%), Positives = 85/94 (90%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLL+VKESA++VP NL+ARRRI+FFANSLFM+MP AP++R ML FSVLTPYYKEDVL+
Sbjct: 3118 LHLLLSVKESAINVPQNLEARRRITFFANSLFMNMPSAPRIRDMLSFSVLTPYYKEDVLY 3297
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERV 214
S + L ++NEDG+SILFYLQKIYPDEW N+L+R+
Sbjct: 3298 SEEDLNKENEDGISILFYLQKIYPDEWTNYLDRL 3399
Score = 47.3 bits (97), Expect(2) = 1e-050
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1 / +1
Query: 168 EQLRLWASYRGQTLTRTVRGMMY 100
E LR W SYRGQTL RTVRGMMY
Sbjct: 3433 EFLREWVSYRGQTLARTVRGMMY 3501
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 90.4 bits (191), Expect(3) = 2e-049
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = -1 / -1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FS
Sbjct: 1651851 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFS 1651708
Score = 83.5 bits (176), Expect(3) = 7e-028
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = -1 / +3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVKESA+++P +L+ARRR++FFANSLFM+MPDAP+VR ML F
Sbjct: 1984605 LLLLLTVKESAINIPQSLEARRRMTFFANSLFMNMPDAPRVRDMLSF 1984745
Score = 76.7 bits (161), Expect(3) = 2e-049
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / -2
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVR 112
DEW NFLERV C +E++L E EE+LRLWASYRGQTLT+T R
Sbjct: 1651439 DEWTNFLERVKCGNEEELRAREDLEEELRLWASYRGQTLTKTGR 1651308
Score = 72.5 bits (152), Expect(3) = 7e-028
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = -1 / +1
Query: 354 SVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
SVLTPYYKEDVL+S + L ++NEDG++ILFYLQ+IYP
Sbjct: 1984918 SVLTPYYKEDVLYSEEELNKENEDGITILFYLQRIYP 1985028
Score = 68.9 bits (144), Expect(3) = 2e-049
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -1 / -1
Query: 351 VLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
VLTPY+ EDVLFS L +QNEDGVSILFYLQKI+P
Sbjct: 1651632 VLTPYFSEDVLFSIFGLEQQNEDGVSILFYLQKIFP 1651525
Score = 48.7 bits (100), Expect(3) = 3e-022
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 245 G*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKT 352
G IFCK*K +ETPSSFC + EKRTSS GV+T
Sbjct: 1651526 GKIFCK*KSIETPSSFCCSKPNMEKRTSSEKYGVRT 1651633
Score = 48.3 bits (99), Expect(3) = 3e-022
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1 / +3
Query: 112 SYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFI 243
S S QSL+ V CPK KLLF++LS F T + F+K+ PFI
Sbjct: 1651308 STSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFI 1651439
Score = 46.9 bits (96), Expect(3) = 3e-022
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 353 EKGNICRTFGASGIDIKRELAKKDILLLASRFVGTSIADSFTVSK 487
EK ++ R GA G+ + E KK L AS+ GTSIADS TVSK
Sbjct: 1651709 EKESMLRILGAGGMSMNSEFEKKVRRLRASKLDGTSIADSLTVSK 1651843
Score = 37.3 bits (75), Expect(3) = 7e-028
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 168 EQLRLWASYRGQTLTRT 118
EQLR W SYRGQTL+RT
Sbjct: 1985174 EQLRQWVSYRGQTLSRT 1985224
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 90.4 bits (191), Expect(3) = 2e-049
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = -1 / -2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FS
Sbjct: 33499 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFS 33356
Score = 76.7 bits (161), Expect(3) = 2e-049
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / -3
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVR 112
DEW NFLERV C +E++L E EE+LRLWASYRGQTLT+T R
Sbjct: 33087 DEWTNFLERVKCGNEEELRAREDLEEELRLWASYRGQTLTKTGR 32956
Score = 68.9 bits (144), Expect(3) = 2e-049
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -1 / -2
Query: 351 VLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
VLTPY+ EDVLFS L +QNEDGVSILFYLQKI+P
Sbjct: 33280 VLTPYFSEDVLFSIFGLEQQNEDGVSILFYLQKIFP 33173
Score = 48.7 bits (100), Expect(3) = 3e-022
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 245 G*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKT 352
G IFCK*K +ETPSSFC + EKRTSS GV+T
Sbjct: 33174 GKIFCK*KSIETPSSFCCSKPNMEKRTSSEKYGVRT 33281
Score = 48.3 bits (99), Expect(3) = 3e-022
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1 / +1
Query: 112 SYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFI 243
S S QSL+ V CPK KLLF++LS F T + F+K+ PFI
Sbjct: 32956 STSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFI 33087
Score = 46.9 bits (96), Expect(3) = 3e-022
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2 / +3
Query: 353 EKGNICRTFGASGIDIKRELAKKDILLLASRFVGTSIADSFTVSK 487
EK ++ R GA G+ + E KK L AS+ GTSIADS TVSK
Sbjct: 33357 EKESMLRILGAGGMSMNSEFEKKVRRLRASKLDGTSIADSLTVSK 33491
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 90.4 bits (191), Expect(3) = 2e-049
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = -1 / -3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FS
Sbjct: 84048 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFS 83905
Score = 76.7 bits (161), Expect(3) = 2e-049
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / -1
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVR 112
DEW NFLERV C +E++L E EE+LRLWASYRGQTLT+T R
Sbjct: 83636 DEWTNFLERVKCGNEEELRAREDLEEELRLWASYRGQTLTKTGR 83505
Score = 68.9 bits (144), Expect(3) = 2e-049
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -1 / -3
Query: 351 VLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
VLTPY+ EDVLFS L +QNEDGVSILFYLQKI+P
Sbjct: 83829 VLTPYFSEDVLFSIFGLEQQNEDGVSILFYLQKIFP 83722
Score = 48.7 bits (100), Expect(3) = 3e-022
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 245 G*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKT 352
G IFCK*K +ETPSSFC + EKRTSS GV+T
Sbjct: 83723 GKIFCK*KSIETPSSFCCSKPNMEKRTSSEKYGVRT 83830
Score = 48.3 bits (99), Expect(3) = 3e-022
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1 / +3
Query: 112 SYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFI 243
S S QSL+ V CPK KLLF++LS F T + F+K+ PFI
Sbjct: 83505 STSFSQSLASVRCPKTKLLFQILSCS*FFFVATFNSFQKVCPFI 83636
Score = 46.9 bits (96), Expect(3) = 3e-022
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 353 EKGNICRTFGASGIDIKRELAKKDILLLASRFVGTSIADSFTVSK 487
EK ++ R GA G+ + E KK L AS+ GTSIADS TVSK
Sbjct: 83906 EKESMLRILGAGGMSMNSEFEKKVRRLRASKLDGTSIADSLTVSK 84040
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 125 bits (268), Expect(3) = 4e-048
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = -1 / +1
Query: 297 EQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
E+ DGVSILFYLQKI+PDEWKNFLERV C +E++L ++ +E++RLWASYRGQTLT+T
Sbjct: 3082 EKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKT 3261
Query: 117 VRGMMYQER 91
VRGMMY ++
Sbjct: 3262 VRGMMYYQK 3288
Score = 71.6 bits (150), Expect(3) = 4e-048
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = -1 / +2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMP 388
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP
Sbjct: 2921 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMP 3028
Score = 34.5 bits (69), Expect(3) = 4e-048
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1 / +1
Query: 348 LTPYYKEDVLFSSQALAEQNE 286
LTPYY EDVLFS+ L ++N+
Sbjct: 3034 LTPYYSEDVLFSTFDLEKEND 3096
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 114 bits (243), Expect(3) = 1e-047
Identities = 46/63 (73%), Positives = 55/63 (87%)
Frame = -1 / +1
Query: 489 LLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSS 310
LLLTVK+SAMD+P NLDARRR+SFFA SLFM MPDAPKVR M+ FSVLTP+Y+ED+ +S+
Sbjct: 3277 LLLTVKDSAMDIPENLDARRRLSFFATSLFMDMPDAPKVRNMMSFSVLTPHYQEDINYST 3456
Query: 309 QAL 301
L
Sbjct: 3457 NEL 3465
Score = 62.5 bits (130), Expect(3) = 1e-047
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +1
Query: 288 EDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEE 166
+ VSI+FY+QKI+PDEWKNFLER+ C++ D L + EE
Sbjct: 3475 KSSVSIIFYMQKIFPDEWKNFLERMGCDNLDALKKEGKEEE 3597
Score = 53.8 bits (111), Expect(3) = 1e-047
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -1 / +1
Query: 180 EHSEEQLRLWASYRGQTLTRTVRGMMY 100
E EE+LR WAS+RGQTL+RTVRGMMY
Sbjct: 3580 EGKEEELRNWASFRGQTLSRTVRGMMY 3660
>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
Length = 5281
Score = 161 bits (346), Expect(2) = 1e-047
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L LLLTVK++A +VP NL+ARRR+ FF NSLFM MP A V +M+PFSV TPYY E VL+
Sbjct: 2437 LHLLLTVKDAAANVPKNLEARRRLEFFTNSLFMDMPQARPVAEMVPFSVFTPYYSETVLY 2616
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERV 214
SS L +NEDG+SILFYLQKI+PDEW+NFLER+
Sbjct: 2617 SSSELRSENEDGISILFYLQKIFPDEWENFLERI 2718
Score = 84.5 bits (178), Expect(2) = 8e-021
Identities = 48/88 (54%), Positives = 54/88 (61%)
Frame = +2 / -3
Query: 224 RKFFHSSG*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIK 403
+KF HSSG IF +*KR++ PSSF S+ E T SL* GVKT G I T A GI I
Sbjct: 2708 KKFSHSSGNIF*R*KRIDIPSSFSLRSSEEL*STVSL*YGVKTLNGTISATGLAWGISIN 2529
Query: 404 RELAKKDILLLASRFVGTSIADSFTVSK 487
E K LLLASRF GT A SFTV +
Sbjct: 2528 NEFVKNSNLLLASRFFGTLAAASFTVRR 2445
Score = 50.6 bits (104), Expect(2) = 1e-047
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -1 / +1
Query: 165 QLRLWASYRGQTLTRTVRGMMYQER 91
+LR W SYRGQTL RTVRGMMY R
Sbjct: 2776 ELRFWVSYRGQTLARTVRGMMYYRR 2850
Score = 37.3 bits (75), Expect(2) = 8e-021
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 101 YIIPLTVLVKVCPRYDAQRR 160
YIIP TVL KVCPR D Q R
Sbjct: 2840 YIIPRTVLAKVCPR*DTQNR 2781
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 93.6 bits (198), Expect(3) = 3e-046
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = -1 / -2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MPDAPK+R ML FS
Sbjct: 93581 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPDAPKIRNMLSFS 93438
Score = 77.6 bits (163), Expect(3) = 3e-046
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
DEW NFLERV C SE++L E EE+LRLWASYRGQTLT+T
Sbjct: 93090 DEWTNFLERVKCGSEEELRAREELEEELRLWASYRGQTLTKT 92965
Score = 70.3 bits (147), Expect(3) = 3e-046
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -1 / -3
Query: 351 VLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
VLTPYY EDVLFS L +QNEDGVSILFYLQKI+P
Sbjct: 93292 VLTPYYSEDVLFSIFGLEKQNEDGVSILFYLQKIFP 93185
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 149 bits (319), Expect(2) = 1e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 1575075 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 1575254
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 1575255 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 1575365
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 2538526 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 2538705
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 2538706 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 2538816
Score = 52.4 bits (108), Expect(2) = 1e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 1575411 LRLWASYRGQTLARTVRGMMYYYR 1575482
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 2538853 LRLWASYRGQTLSRTVRGMMY 2538915
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
Length = 159629
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 36979 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 37158
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 37159 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 37269
Score = 52.4 bits (108), Expect(2) = 2e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 37315 LRLWASYRGQTLARTVRGMMYYYR 37386
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
sequence
Length = 116448
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 15702 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 15881
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 15882 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 15992
Score = 52.4 bits (108), Expect(2) = 2e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 16038 LRLWASYRGQTLARTVRGMMYYYR 16109
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM,
complete sequence
Length = 95519
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / -1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 16082 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 15903
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 15902 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 15792
Score = 52.4 bits (108), Expect(2) = 2e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 15746 LRLWASYRGQTLARTVRGMMYYYR 15675
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 149 bits (321), Expect(2) = 2e-044
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -1 / +1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
L T+K+SA VP NL+ARRR+ FF NSLFM +P VR+ML FSV TPYY E VL+S
Sbjct: 3160 LFTIKDSAAHVPRNLEARRRLQFFTNSLFMDVPPPKSVRKMLSFSVFTPYYSEVVLYSMA 3339
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERV 214
L ++NEDG+SILFYLQKIYPDEWKNFL R+
Sbjct: 3340 ELTKRNEDGISILFYLQKIYPDEWKNFLARI 3432
Score = 51.5 bits (106), Expect(2) = 2e-044
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 186 ETEHSEEQLRLWASYRGQTLTRTVRGMMYQER 91
+ E +LR WASYRGQTL RTVRGMMY +
Sbjct: 3466 DNERDILELRFWASYRGQTLARTVRGMMYYRK 3561
>ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTHASE-LIKE 5);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT4G03550 (ATGSL05) mRNA, complete cds
Length = 5835
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 2755 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 2934
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 2935 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 3045
Score = 52.4 bits (108), Expect(2) = 2e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 3091 LRLWASYRGQTLARTVRGMMYYYR 3162
>emb|AX506240.1| Sequence 935 from Patent WO0216655
Length = 5273
Score = 149 bits (319), Expect(2) = 2e-044
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 2520 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 2699
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 2700 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 2810
Score = 52.4 bits (108), Expect(2) = 2e-044
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 162 LRLWASYRGQTLTRTVRGMMYQER 91
LRLWASYRGQTL RTVRGMMY R
Sbjct: 2856 LRLWASYRGQTLARTVRGMMYYYR 2927
>gb|BX841223.1|BX841223 BX841223 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB52ZE04 5PRIM, mRNA sequence
Length = 573
Score = 178 bits (384), Expect = 8e-044
Identities = 74/111 (66%), Positives = 89/111 (80%)
Frame = -1 / +3
Query: 474 KESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQALAE 295
+ESAMDVP+NL+ARRR++FF+NSLFM MP APK+R ML FSVLTPY+ EDVLFS L +
Sbjct: 240 EESAMDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSEDVLFSIFGLEQ 419
Query: 294 QNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQLHETEHSEEQLRLWASY 142
QNEDGVSIL YLQKI+PDEW N LERV C +E++L E +E+L ASY
Sbjct: 420 QNEDGVSILVYLQKIFPDEWTNGLERVKCGNEEELRAREDLDEELVFCASY 572
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +2
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 71723 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 71902
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 71903 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 72013
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +2
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 72050 LRLWASYRGQTLSRTVRGMMY 72112
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / -1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 181386 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 181207
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 181206 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 181096
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 181059 LRLWASYRGQTLSRTVRGMMY 180997
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 10198 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 10377
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 10378 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 10488
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 10525 LRLWASYRGQTLSRTVRGMMY 10587
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +2
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 701 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 880
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 881 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 991
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +2
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 1028 LRLWASYRGQTLSRTVRGMMY 1090
>ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHASE LIKE-1); 1,3-beta-glucan
synthase/ transferase, transferring glycosyl groups
AT4G04970 (ATGSL1) mRNA, complete cds
Length = 5827
Score = 140 bits (300), Expect(2) = 8e-042
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 2581 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 2760
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 2761 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 2871
Score = 51.9 bits (107), Expect(2) = 8e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 162 LRLWASYRGQTLTRTVRGMMY 100
LRLWASYRGQTL+RTVRGMMY
Sbjct: 2908 LRLWASYRGQTLSRTVRGMMY 2970
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 153 bits (328), Expect(2) = 9e-039
Identities = 68/100 (68%), Positives = 79/100 (79%)
Frame = -1 / +2
Query: 489 LLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSS 310
LLLT KESAMDVP+NL+ARRRISFF+NSLFM MP APKVR ML FSVLTPYY E+VLFS
Sbjct: 3335 LLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPMAPKVRNMLSFSVLTPYYTEEVLFSL 3514
Query: 309 QALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQL 190
+ L NEDGVSILFYLQKI+P ++ ++ V E +L
Sbjct: 3515 RDLETPNEDGVSILFYLQKIFPGDFCSYAVNVAYILESRL 3634
Score = 102 bits (217), Expect(2) = 3e-034
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = +2 / -3
Query: 239 SSG*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAK 418
S G IFC+*KR+ETPSSF + + +EKRTSS+**GVKTE ++ RT GA G+ + E K
Sbjct: 3585 SPGKIFCR*KRIETPSSFGVSRSRKEKRTSSV**GVKTENDSMLRTLGAIGMSMNNEFEK 3406
Query: 419 KDILLLASRFVGTSIADSFTVSK 487
+I LLAS+ GTSIADS V+K
Sbjct: 3405 NEIRLLASKLEGTSIADSLVVNK 3337
Score = 99.1 bits (210), Expect(2) = 6e-024
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1 / +2
Query: 246 PDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVRGMMYQER 91
PDEW NFLERV C SE++L E++ EE+LRLWASYRGQTLTRTVRGMMY +
Sbjct: 3653 PDEWNNFLERVKCLSEEELKESDELEEELRLWASYRGQTLTRTVRGMMYYRK 3808
Score = 64.8 bits (135), Expect(2) = 3e-034
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +1 / -2
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIW 246
+VHH SYSS QSL +* P K L + L++ +FT +HP KKI PFIW
Sbjct: 3802 IVHHSSYSSSQSLPSI*SP*TKFLL*FIRLLKFLFT*ALHPLKKIVPFIW 3653
Score = 33.1 bits (66), Expect(2) = 6e-024
Identities = 26/78 (33%), Positives = 34/78 (43%)
Frame = -2 / +3
Query: 473 RNRLWMSLQTWMLEGGYLSLLILFLCRCQMLQKCGKCCPSLS*LLIIKKMFFSLHKH*QN 294
++ LWMS TW EGG S I C K C L *LLI K S ++
Sbjct: 3351 KSLLWMSPLTWKQEGGSHSSQIRCSWTCLWHLKFATCYHFLF*LLITLKRSSSPCGTWKH 3530
Query: 293 RMRTEFPSFFICKKSTQM 240
+M+ F S K+ Q+
Sbjct: 3531 QMKMVFQSSSTYKRFFQV 3584
Score = 29.0 bits (57), Expect(2) = 9e-039
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3 / +1
Query: 154 LGIIPGTNFDKNCKRDDVPRK 92
+G I NFD NCKR+DV K
Sbjct: 3745 MGFI*RANFD*NCKRNDVLSK 3807
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 153 bits (328), Expect(2) = 9e-039
Identities = 68/100 (68%), Positives = 79/100 (79%)
Frame = -1 / +1
Query: 489 LLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSS 310
LLLT KESAMDVP+NL+ARRRISFF+NSLFM MP APKVR ML FSVLTPYY E+VLFS
Sbjct: 3193 LLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPMAPKVRNMLSFSVLTPYYTEEVLFSL 3372
Query: 309 QALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESEDQL 190
+ L NEDGVSILFYLQKI+P ++ ++ V E +L
Sbjct: 3373 RDLETPNEDGVSILFYLQKIFPGDFCSYAVNVAYILESRL 3492
Score = 102 bits (217), Expect(2) = 3e-034
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = +2 / -2
Query: 239 SSG*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKTEKGNICRTFGASGIDIKRELAK 418
S G IFC+*KR+ETPSSF + + +EKRTSS+**GVKTE ++ RT GA G+ + E K
Sbjct: 3443 SPGKIFCR*KRIETPSSFGVSRSRKEKRTSSV**GVKTENDSMLRTLGAIGMSMNNEFEK 3264
Query: 419 KDILLLASRFVGTSIADSFTVSK 487
+I LLAS+ GTSIADS V+K
Sbjct: 3263 NEIRLLASKLEGTSIADSLVVNK 3195
Score = 99.1 bits (210), Expect(2) = 6e-024
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1 / +1
Query: 246 PDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRTVRGMMYQER 91
PDEW NFLERV C SE++L E++ EE+LRLWASYRGQTLTRTVRGMMY +
Sbjct: 3511 PDEWNNFLERVKCLSEEELKESDELEEELRLWASYRGQTLTRTVRGMMYYRK 3666
Score = 64.8 bits (135), Expect(2) = 3e-034
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +1 / -1
Query: 97 LVHHPSYSSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIW 246
+VHH SYSS QSL +* P K L + L++ +FT +HP KKI PFIW
Sbjct: 3660 IVHHSSYSSSQSLPSI*SP*TKFLL*FIRLLKFLFT*ALHPLKKIVPFIW 3511
Score = 33.1 bits (66), Expect(2) = 6e-024
Identities = 26/78 (33%), Positives = 34/78 (43%)
Frame = -2 / +2
Query: 473 RNRLWMSLQTWMLEGGYLSLLILFLCRCQMLQKCGKCCPSLS*LLIIKKMFFSLHKH*QN 294
++ LWMS TW EGG S I C K C L *LLI K S ++
Sbjct: 3209 KSLLWMSPLTWKQEGGSHSSQIRCSWTCLWHLKFATCYHFLF*LLITLKRSSSPCGTWKH 3388
Query: 293 RMRTEFPSFFICKKSTQM 240
+M+ F S K+ Q+
Sbjct: 3389 QMKMVFQSSSTYKRFFQV 3442
Score = 29.0 bits (57), Expect(2) = 9e-039
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 154 LGIIPGTNFDKNCKRDDVPRK 92
+G I NFD NCKR+DV K
Sbjct: 3603 MGFI*RANFD*NCKRNDVLSK 3665
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 88.6 bits (187), Expect(4) = 9e-039
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -1 / +2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK++ ML FS
Sbjct: 59258 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFS 59401
Score = 78.5 bits (165), Expect(4) = 9e-039
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = -1 / +1
Query: 246 PDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
PDEWKNFLERV C +E++L ++ +E++RLWASYRGQTLT+T
Sbjct: 59752 PDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKT 59880
Score = 37.3 bits (75), Expect(4) = 9e-039
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 297 EQNEDGVSILFYLQKIYP 244
E+ DGVSILFYLQKI+P
Sbjct: 59614 EKENDGVSILFYLQKIFP 59667
Score = 34.5 bits (69), Expect(4) = 9e-039
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1 / +1
Query: 348 LTPYYKEDVLFSSQALAEQNE 286
LTPYY EDVLFS+ L ++N+
Sbjct: 59566 LTPYYSEDVLFSTFDLEKEND 59628
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 87.7 bits (185), Expect(3) = 1e-036
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVKESAMDVPTNL+A+RRI+FF NSLFM MP AP+VR ML F
Sbjct: 92536 LHLLLTVKESAMDVPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSF 92676
Score = 62.5 bits (130), Expect(3) = 1e-036
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -1 / +3
Query: 357 FSVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
+SVLTPYY E+ ++S L +NEDGVS+++YLQKI+P
Sbjct: 92940 YSVLTPYYSEETVYSKNDLEMENEDGVSVVYYLQKIFP 93053
Score = 59.3 bits (123), Expect(3) = 1e-036
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = -1 / +2
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
DEW NFLER+ C+ E + E+E + QLR W S RGQTL RT
Sbjct: 93137 DEWTNFLERLDCKDETSVLESEENILQLRHWVSLRGQTLFRT 93262
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 87.7 bits (185), Expect(3) = 1e-036
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -1 / +2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVKESAMDVPTNL+A+RRI+FF NSLFM MP AP+VR ML F
Sbjct: 10334 LHLLLTVKESAMDVPTNLEAQRRIAFFTNSLFMDMPRAPRVRNMLSF 10474
Score = 62.5 bits (130), Expect(3) = 1e-036
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -1 / +1
Query: 357 FSVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
+SVLTPYY E+ ++S L +NEDGVS+++YLQKI+P
Sbjct: 10738 YSVLTPYYSEETVYSKNDLEMENEDGVSVVYYLQKIFP 10851
Score = 59.3 bits (123), Expect(3) = 1e-036
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = -1 / +3
Query: 243 DEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
DEW NFLER+ C+ E + E+E + QLR W S RGQTL RT
Sbjct: 10935 DEWTNFLERLDCKDETSVLESEENILQLRHWVSLRGQTLFRT 11060
>dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE1
Length = 84462
Score = 88.6 bits (187), Expect(5) = 6e-035
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -1 / +2
Query: 489 LLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
LLLTVK+SAMD+P NLDARRR+SFFA SLFM MPDAPKVR M+ F
Sbjct: 26759 LLLTVKDSAMDIPENLDARRRLSFFATSLFMDMPDAPKVRNMMSF 26893
Score = 39.1 bits (79), Expect(5) = 6e-035
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 180 EHSEEQLRLWASYRGQTLTRT 118
E EE+LR WAS+RGQTL+RT
Sbjct: 27260 EGKEEELRNWASFRGQTLSRT 27322
Score = 37.7 bits (76), Expect(5) = 6e-035
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / +2
Query: 243 DEWKNFLERVHCESEDQLHETEHSEE 166
DEWKNFLER+ C++ D L + EE
Sbjct: 27200 DEWKNFLERMGCDNLDALKKEGKEEE 27277
Score = 28.6 bits (56), Expect(5) = 6e-035
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 354 SVLTPYYKEDVLFSSQAL 301
SVLTP+Y+ED+ +S+ L
Sbjct: 27011 SVLTPHYQEDINYSTNEL 27064
Score = 27.6 bits (54), Expect(5) = 6e-035
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / +2
Query: 288 EDGVSILFYLQKIYP 244
+ VSI+FY+QKI+P
Sbjct: 27074 KSSVSIIFYMQKIFP 27118
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 149 bits (319), Expect = 8e-035
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = -1 / +3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLF 316
L +LT ++S VP NL+ARRRI+FF+NSLFM+MP AP+V +M+ FSVLTPYY E+V++
Sbjct: 1576260 LHTILTSRDSMHSVPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVVY 1576439
Query: 315 SSQALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCE 205
S + L + EDG+S L+YLQ IY DEWKNF ER+H E
Sbjct: 1576440 SKEQLRNETEDGISTLYYLQTIYADEWKNFKERMHRE 1576550
Score = 140 bits (300), Expect = 3e-032
Identities = 53/97 (54%), Positives = 74/97 (76%)
Frame = -1 / +2
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFSVLTPYYKEDVLFSSQ 307
+LT ++ +VP N++AR R++FF+NSLFM+MP AP V +M+ FSVLTPYY E+V++ +
Sbjct: 2539706 ILTSRDPMHNVPKNIEARERLAFFSNSLFMTMPQAPSVEKMMAFSVLTPYYDEEVMYRQE 2539885
Query: 306 ALAEQNEDGVSILFYLQKIYPDEWKNFLERVHCESED 196
L +NEDG+S LFYLQ+IY DEW NFLER+ E +
Sbjct: 2539886 MLRAENEDGISTLFYLQRIYEDEWVNFLERMRREGAE 2539996
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 73.5 bits (154), Expect(4) = 6e-034
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1 / -3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVK++A +VP NL+ARRR+ FF NSLFM MP A V +M+PF
Sbjct: 21853 LHLLLTVKDAAANVPKNLEARRRLEFFTNSLFMDMPQARPVAEMVPF 21713
Score = 67.0 bits (140), Expect(4) = 6e-034
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -1 / -1
Query: 354 SVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
SV TPYY E VL+SS L +NEDG+SILFYLQKI+P
Sbjct: 21630 SVFTPYYSETVLYSSSELRSENEDGISILFYLQKIFP 21520
Score = 34.1 bits (68), Expect(4) = 6e-034
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 165 QLRLWASYRGQTLTRT 118
+LR W SYRGQTL RT
Sbjct: 21340 ELRFWVSYRGQTLART 21293
Score = 26.7 bits (52), Expect(4) = 6e-034
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 243 DEWKNFLERV 214
DEW+NFLER+
Sbjct: 21427 DEWENFLERI 21398
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 88.6 bits (187), Expect(2) = 2e-033
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -1 / -1
Query: 489 LLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
LLLT KESAMDVP+NL+ARRRISFF+NSLFM MP APKVR ML FS
Sbjct: 66713 LLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPMAPKVRNMLSFS 66576
Score = 84.0 bits (177), Expect(2) = 2e-033
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -1 / -2
Query: 246 PDEWKNFLERVHCESEDQLHETEHSEEQLRLWASYRGQTLTRT 118
PDEW NFLERV C SE++L E++ EE+LRLWASYRGQTLTRT
Sbjct: 66085 PDEWNNFLERVKCLSEEELKESDELEEELRLWASYRGQTLTRT 65957
Score = 55.1 bits (114), Expect(3) = 6e-021
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +3
Query: 239 SSG*IFCK*KRMETPSSFCSASACEEKRTSSL**GVKT 352
S G IFC+*KR+ETPSSF + + +EKRTSS+**GVKT
Sbjct: 66153 SPGKIFCR*KRIETPSSFGVSRSRKEKRTSSV**GVKT 66266
Score = 50.1 bits (103), Expect(3) = 6e-021
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2 / +1
Query: 353 EKGNICRTFGASGIDIKRELAKKDILLLASRFVGTSIADSFTVSK 487
E ++ RT GA G+ + E K +I LLAS+ GTSIADS V+K
Sbjct: 66577 ENDSMLRTLGAIGMSMNNEFEKNEIRLLASKLEGTSIADSLVVNK 66711
Score = 50.1 bits (103), Expect(3) = 6e-021
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1 / +2
Query: 118 SSCQSLSPV*CPKAKLLFRMLSLVELIFTLTMHPFKKIFPFIW 246
SS QSL +* P K L + L++ +FT +HP KKI PFIW
Sbjct: 65957 SSSQSLPSI*SP*TKFLL*FIRLLKFLFT*ALHPLKKIVPFIW 66085
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
Length = 89517
Score = 83.5 bits (176), Expect(3) = 3e-032
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLL+VKESA++VP NL+ARRRI+FFANSLFM+MP AP++R ML F
Sbjct: 62866 LHLLLSVKESAINVPQNLEARRRITFFANSLFMNMPSAPRIRDMLSF 63006
Score = 77.6 bits (163), Expect(3) = 3e-032
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = -1 / +1
Query: 357 FSVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
FSVLTPYYKEDVL+S + L ++NEDG+SILFYLQKIYP
Sbjct: 63208 FSVLTPYYKEDVLYSEEDLNKENEDGISILFYLQKIYP 63321
Score = 32.7 bits (65), Expect(3) = 3e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 168 EQLRLWASYRGQTLTRT 118
E LR W SYRGQTL RT
Sbjct: 63472 EFLREWVSYRGQTLART 63522
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 83.5 bits (176), Expect(3) = 4e-032
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = -1 / -3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVKESA+++P +L+ARRR++FFANSLFM+MPDAP+VR ML F
Sbjct: 69251 LLLLLTVKESAINIPQSLEARRRMTFFANSLFMNMPDAPRVRDMLSF 69111
Score = 72.5 bits (152), Expect(3) = 4e-032
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = -1 / -1
Query: 354 SVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
SVLTPYYKEDVL+S + L ++NEDG++ILFYLQ+IYP
Sbjct: 68938 SVLTPYYKEDVLYSEEELNKENEDGITILFYLQRIYP 68828
Score = 37.3 bits (75), Expect(3) = 4e-032
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1 / -2
Query: 168 EQLRLWASYRGQTLTRT 118
EQLR W SYRGQTL+RT
Sbjct: 68682 EQLRQWVSYRGQTLSRT 68632
>gb|AQ956062.1|AQ956062 LERAH21TR LERA Arabidopsis thaliana genomic clone LERAH21, DNA
sequence
Length = 708
Score = 83.5 bits (176), Expect(3) = 1e-031
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = -1 / +1
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L LLLTVKESA+++P +L+ARRR++FFANSLFM+MPDAP+VR ML F
Sbjct: 169 LLLLLTVKESAINIPQSLEARRRMTFFANSLFMNMPDAPRVRDMLSF 309
Score = 72.5 bits (152), Expect(3) = 1e-031
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = -1 / +2
Query: 354 SVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
SVLTPYYKEDVL+S + L ++NEDG++ILFYLQ+IYP
Sbjct: 482 SVLTPYYKEDVLYSEEELNKENEDGITILFYLQRIYP 592
Score = 21.7 bits (41), Expect(3) = 1e-031
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 243 DEWKNFLERVH 211
+EW N+ ERV+
Sbjct: 669 EEWSNYCERVN 701
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete
sequence
Length = 99128
Score = 68.4 bits (143), Expect(4) = 8e-026
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -1 / +3
Query: 357 FSVLTPYYKEDVLFSSQALAEQNEDGVSILFYLQKIYP 244
FSV TPYY E VL+S L ++NEDG+SILFYLQKIYP
Sbjct: 63861 FSVFTPYYSEVVLYSMAELTKRNEDGISILFYLQKIYP 63974
Score = 64.3 bits (134), Expect(4) = 8e-026
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -1 / +3
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
L T+K+SA VP NL+ARRR+ FF NSLFM +P VR+ML F
Sbjct: 63651 LFTIKDSAAHVPRNLEARRRLQFFTNSLFMDVPPPKSVRKMLSF 63782
Score = 37.3 bits (75), Expect(4) = 8e-026
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / +2
Query: 186 ETEHSEEQLRLWASYRGQTLTRTVRGMMYQERFS 85
+ E +LR WASYRGQTL RT Y FS
Sbjct: 64181 DNERDILELRFWASYRGQTLARTGTINAYLHLFS 64282
Score = 25.8 bits (50), Expect(4) = 8e-026
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 243 DEWKNFLERV 214
DEWKNFL R+
Sbjct: 64118 DEWKNFLARI 64147
>emb|AL806921.1| Arabidopsis thaliana transposon insertion STS SM_3.20107, sequence
tagged site
Length = 461
Score = 86.8 bits (183), Expect(4) = 4e-024
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = -1 / -1
Query: 486 LLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPF 355
LLTVK+SAMD+P NLDARRR+SFFA SLFM MPDAPKVR M+ F
Sbjct: 461 LLTVKDSAMDIPENLDARRRLSFFATSLFMDMPDAPKVRNMMSF 330
Score = 29.5 bits (58), Expect(4) = 4e-024
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 354 SVLTPYYKEDVLFSSQAL 301
SVLTP+Y+ED+ +S+ L
Sbjct: 212 SVLTPHYQEDITYSTNEL 159
Score = 27.6 bits (54), Expect(4) = 4e-024
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 288 EDGVSILFYLQKIYP 244
+ VSI+FY+QKI+P
Sbjct: 149 KSSVSIIFYMQKIFP 105
Score = 22.6 bits (43), Expect(4) = 4e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -1
Query: 243 DEWKNFL 223
DEWKNFL
Sbjct: 23 DEWKNFL 3
>emb|AJ523390.1|ATH523390 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
312C09
Length = 497
Score = 88.6 bits (187), Expect(3) = 4e-023
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -1 / -2
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK++ ML FS
Sbjct: 394 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFS 251
Score = 34.5 bits (69), Expect(3) = 4e-023
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 348 LTPYYKEDVLFSSQALAEQNE 286
LTPYY EDVLFS+ L ++N+
Sbjct: 86 LTPYYSEDVLFSTFDLEKEND 24
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 297 EQNEDGVSILFY 262
E+ DGVSILFY
Sbjct: 38 EKENDGVSILFY 3
>emb|AJ522898.1|ATH522898 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
301G10
Length = 498
Score = 88.6 bits (187), Expect(3) = 4e-023
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -1 / -3
Query: 495 LRLLLTVKESAMDVPTNLDARRRISFFANSLFMSMPDAPKVRQMLPFS 352
L LLLTVKESAMDVP+NL+ARRR++FF+NSLFM MP APK++ ML FS
Sbjct: 394 LHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFS 251
Score = 34.5 bits (69), Expect(3) = 4e-023
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 348 LTPYYKEDVLFSSQALAEQNE 286
LTPYY EDVLFS+ L ++N+
Sbjct: 86 LTPYYSEDVLFSTFDLEKEND 24
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 297 EQNEDGVSILFY 262
E+ DGVSILFY
Sbjct: 38 EKENDGVSILFY 3
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,075,518,670
Number of Sequences: 1013581
Number of extensions: 15102793
Number of successful extensions: 270729
Number of sequences better than 1.0e-020: 49
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 28796642256
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)