TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM12h10.yg.2.1
(339 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AX506240.1| Sequence 935 from Patent WO0216655 193 2e-048
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 193 2e-048
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 193 2e-048
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 193 2e-048
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 193 2e-048
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 193 2e-048
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 193 2e-048
gb|AV825334.1|AV825334 AV825334 RAFL7 Arabidopsis thaliana ... 182 5e-045
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 182 5e-045
emb|AX059538.1| Sequence 271 from Patent WO0055325 182 5e-045
gb|AY050990.1| Arabidopsis thaliana putative glucan synthas... 182 5e-045
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 182 5e-045
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 182 5e-045
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 182 5e-045
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 150 2e-035
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 149 4e-035
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 149 4e-035
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 149 4e-035
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 149 4e-035
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 143 2e-033
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 143 2e-033
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 143 2e-033
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 143 2e-033
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 141 6e-033
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 141 6e-033
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 141 6e-033
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 141 6e-033
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 141 6e-033
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 141 6e-033
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 141 9e-033
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 141 9e-033
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 141 9e-033
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 139 2e-032
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 138 8e-032
emb|AX412747.1| Sequence 511 from Patent WO0222675 138 8e-032
emb|AX441264.1| Sequence 18 from Patent EP1209228 138 8e-032
emb|AX508002.1| Sequence 2697 from Patent WO0216655 138 8e-032
emb|AX651854.1| Sequence 720 from Patent WO03000898 138 8e-032
dbj|BD181338.1| A stress-responsive promoter 138 8e-032
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 138 8e-032
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 138 8e-032
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 138 8e-032
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 138 8e-032
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 138 8e-032
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 138 8e-032
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 138 8e-032
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 138 8e-032
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 138 8e-032
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 138 8e-032
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 127 9e-029
emb|AL772647.1| Arabidopsis thaliana transposon insertion S... 123 2e-027
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 123 2e-027
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 123 2e-027
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 62 4e-026
emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cD... 118 7e-026
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 96 7e-026
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 96 7e-026
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 58 4e-023
>emb|AX506240.1| Sequence 935 from Patent WO0216655
Length = 5273
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 4242 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 4421
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 4422 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 4574
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -2
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 4573 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 4394
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 4393 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 4241
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 1576977 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 1577156
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 1577157 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 1577309
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 2540233 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 2540412
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 2540413 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 2540565
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 1577308 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 1577129
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 1577128 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 1576976
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -2
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 2540564 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 2540385
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 2540384 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 2540235
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
Length = 159629
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 38881 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 39060
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 39061 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 39213
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 39212 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 39033
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 39032 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 38880
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
sequence
Length = 116448
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 17604 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 17783
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 17784 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 17936
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 17935 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 17756
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 17755 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 17603
>ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTHASE-LIKE 5);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT4G03550 (ATGSL05) mRNA, complete cds
Length = 5835
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 4477 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 4656
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 4657 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 4809
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -2
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 4808 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 4629
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 4628 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 4476
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM,
complete sequence
Length = 95519
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / -1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 14180 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 14001
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 14000 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 13848
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / +1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 13849 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 14028
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 14029 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 14181
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 193 bits (415), Expect = 2e-048
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
S+V TFSMGT++ ILHGGAKYRAT RGFVV+HK F ENY LYAR HF+KAIELG
Sbjct: 1578162 SAVFYTFSMGTRAHYFGRTILHGGAKYRATGRGFVVEHKGFTENYRLYARSHFVKAIELG 1578341
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+IL VYA+HS IAK++L+YI +SWFLV+SWIMAPF F SGFDWLKTV
Sbjct: 1578342 LILIVYASHSPIAKDSLIYIAMTITSWFLVISWIMAPFVFNPSGFDWLKTV 1578494
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 2541413 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 2541592
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 2541593 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 2541745
Score = 113 bits (242), Expect = 2e-024
Identities = 60/111 (54%), Positives = 66/111 (59%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QS P NGAIIH+ TRNQL M* + LAI LC A T+ I PSS+AF K
Sbjct: 1578493 TVLSQSNPDGLNTNGAIIHEITRNQLVIVMAM*INESLAIGLCEA*TMRISPSSMAFTK* 1578314
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTDE 335
AYS *FS LC TT PR VA Y APP RI LVP+ENV T E
Sbjct: 1578313 LRAYSR*FSVNPLCSTTNPRPVALYLAPPWRIVRPK**ALVPIENV*KTAE 1578161
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 2541744 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 2541565
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 2541564 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 2541415
>gb|AV825334.1|AV825334 AV825334 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-G20 5',
mRNA sequence
Length = 612
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 209 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 388
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 389 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 541
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 540 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 361
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 360 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 211
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 11905 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 12084
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 12085 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 12237
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -2
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 12236 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 12057
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 12056 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 11907
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 2408 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 2587
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 2588 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 2740
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 2739 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 2560
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 2559 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 2410
>gb|AY050990.1| Arabidopsis thaliana putative glucan synthase (At4g04970) mRNA,
partial cds
Length = 1764
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 209 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 388
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 389 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 541
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -1
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 540 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 361
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 360 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 211
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / -1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 179679 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 179500
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 179499 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 179347
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / +2
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 179348 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 179527
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 179528 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 179677
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 73430 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 73609
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 73610 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 73762
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 73761 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 73582
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 73581 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 73432
>ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHASE LIKE-1); 1,3-beta-glucan
synthase/ transferase, transferring glycosyl groups
AT4G04970 (ATGSL1) mRNA, complete cds
Length = 5827
Score = 182 bits (391), Expect = 5e-045
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+S TFSMGT++ ILHGGAKYRAT RGFVV+HK FAENY LYAR HFIKAIEL
Sbjct: 4288 ASFFYTFSMGTRTHYFGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARTHFIKAIELA 4467
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
IIL VYAA+S +AK++ VYI SSWFL+ SWI++PF F SGFDWLKTV
Sbjct: 4468 IILLVYAAYSPLAKSSFVYILMTISSWFLITSWIISPFLFNPSGFDWLKTV 4620
Score = 112 bits (239), Expect = 4e-024
Identities = 59/110 (53%), Positives = 63/110 (57%)
Frame = +3 / -3
Query: 3 TVFNQSKPXXXKANGAIIHDTTRNQLXXXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TV +QSKP NG II D RNQL M*T+ LA L AAYT II SSIA MK
Sbjct: 4619 TVLSQSKPEGLNRNGEIIQDVIRNQLEIVISM*TNELLANGL*AAYTNRIIASSIALMK* 4440
Query: 183 PLAYSX*FSAKLLCCTTKPRXVARYFAPP*RIXXSXXWLLVPMENVXNTD 332
AY+ *FSA LC TT P VARY APP I W+ VPME V D
Sbjct: 4439 VRAYNL*FSANFLCSTTNPLPVARYLAPPWSIVRPK*WVRVPMEKV*KND 4290
>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
Length = 5281
Score = 150 bits (322), Expect = 2e-035
Identities = 58/110 (52%), Positives = 75/110 (68%)
Frame = -3 / +1
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
SV TFS+GT++ ILHGGAKYRAT RGFVVQH FA+NY LY+R HF+KA E+ +
Sbjct: 4087 SVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFADNYRLYSRSHFVKAFEVAL 4266
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+L +Y A+ ++ SSWFLV+SW+ AP+ F SGF+W KTV
Sbjct: 4267 LLIIYIAYGYTDGGASSFVLLTISSWFLVISWLFAPYIFNPSGFEWQKTV 4416
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 149 bits (319), Expect = 4e-035
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ ILHGG+KYRAT RGFVV H FAENY LY+R HF+K +EL
Sbjct: 1987525 ASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELV 1987704
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + +++ Y+ S WFLV SW+ APF F SGF+W KTV
Sbjct: 1987705 ILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTV 1987857
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / -3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 1649059 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 1648880
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 1648879 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 1648727
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 149 bits (319), Expect = 4e-035
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -3 / -1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ ILHGG+KYRAT RGFVV H FAENY LY+R HF+K +EL
Sbjct: 66331 ASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELV 66152
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + +++ Y+ S WFLV SW+ APF F SGF+W KTV
Sbjct: 66151 ILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTV 65999
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 149 bits (319), Expect = 4e-035
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ ILHGG+KYRAT RGFVV H FAENY LY+R HF+K +EL
Sbjct: 4765 ASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELV 4944
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + +++ Y+ S WFLV SW+ APF F SGF+W KTV
Sbjct: 4945 ILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTV 5097
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 149 bits (319), Expect = 4e-035
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ ILHGG+KYRAT RGFVV H FAENY LY+R HF+K +EL
Sbjct: 1987678 ASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELV 1987857
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + +++ Y+ S WFLV SW+ APF F SGF+W KTV
Sbjct: 1987858 ILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTV 1988010
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / -2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 1649182 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 1649003
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 1649002 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 1648850
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 143 bits (306), Expect = 2e-033
Identities = 57/111 (51%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTKS ILHGG+KYR T RGFVV H FAENY LY+R HF+K +EL
Sbjct: 21811096 ASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELL 21811275
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
++L VY + +++ +Y+ S WF+V SW+ APF F SGF+W KTV
Sbjct: 21811276 LLLVVYQIYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTV 21811428
Score = 123 bits (263), Expect = 2e-027
Identities = 50/102 (49%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 319 TFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTV 140
TFS+GTK+ ILHGGAKYR T R VV H +F+ENY LY+R HFIK EL I+L V
Sbjct: 4891343 TFSLGTKTHYFGRTILHGGAKYRPTGRKVVVFHANFSENYRLYSRSHFIKGFELMILLVV 4891522
Query: 139 YAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDW 14
Y +++ + Y S WF+ +W+ APF F SGF W
Sbjct: 4891523 YELFKHTSQSNMAYSFITFSVWFMSFTWLCAPFLFNPSGFTW 4891648
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
Length = 89517
Score = 143 bits (306), Expect = 2e-033
Identities = 57/111 (51%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTKS ILHGG+KYR T RGFVV H FAENY LY+R HF+K +EL
Sbjct: 65782 ASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELL 65961
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
++L VY + +++ +Y+ S WF+V SW+ APF F SGF+W KTV
Sbjct: 65962 LLLVVYQIYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTV 66114
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 143 bits (306), Expect = 2e-033
Identities = 57/111 (51%), Positives = 74/111 (66%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTKS ILHGG+KYR T RGFVV H FAENY LY+R HF+K +EL
Sbjct: 4768 ASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELL 4947
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
++L VY + +++ +Y+ S WF+V SW+ APF F SGF+W KTV
Sbjct: 4948 LLLVVYQIYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTV 5100
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 143 bits (306), Expect = 2e-033
Identities = 57/111 (51%), Positives = 74/111 (66%)
Frame = -3 / +2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTKS ILHGG+KYR T RGFVV H FAENY LY+R HF+K +EL
Sbjct: 21863528 ASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELL 21863707
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
++L VY + +++ +Y+ S WF+V SW+ APF F SGF+W KTV
Sbjct: 21863708 LLLVVYQIYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTV 21863860
Score = 123 bits (263), Expect = 2e-027
Identities = 50/102 (49%), Positives = 63/102 (61%)
Frame = -3 / +2
Query: 319 TFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGIILTV 140
TFS+GTK+ ILHGGAKYR T R VV H +F+ENY LY+R HFIK EL I+L V
Sbjct: 4901447 TFSLGTKTHYFGRTILHGGAKYRPTGRKVVVFHANFSENYRLYSRSHFIKGFELMILLVV 4901626
Query: 139 YAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDW 14
Y +++ + Y S WF+ +W+ APF F SGF W
Sbjct: 4901627 YELFKHTSQSNMAYSFITFSVWFMSFTWLCAPFLFNPSGFTW 4901752
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +2
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 13328 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 13507
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 13508 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 13654
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +1
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 95530 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 95709
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 95710 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 95856
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +1
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 4741 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 4920
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 4921 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 5067
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +1
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 4894 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 5073
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 5074 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 5220
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +1
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 4741 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 4920
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 4921 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 5067
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 141 bits (303), Expect = 6e-033
Identities = 56/109 (51%), Positives = 74/109 (67%)
Frame = -3 / +2
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK ILHGG+KYRAT RGFVV+H+ FAENY +Y+R HF+K +EL ++
Sbjct: 5712185 VFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVL 5712364
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L Y + A++++ Y S+WFLV SW+ APF F SGF+W K V
Sbjct: 5712365 LICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIV 5712511
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 13605778 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 13605957
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 13605958 ILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 13606110
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 141 bits (302), Expect = 9e-033
Identities = 55/110 (50%), Positives = 75/110 (68%)
Frame = -3 / +2
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
+V TFS+GT++ ILHGGA+Y+AT RGFVV+H F+ENY LY+R HF+KA+E+ +
Sbjct: 566 TVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVKHIKFSENYRLYSRSHFVKAMEVIL 745
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+L VY A+ + YI SSWFL VSW+ AP+ F +GF+W K V
Sbjct: 746 LLVVYLAYGNDEAGAVSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVV 895
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 141 bits (302), Expect = 9e-033
Identities = 55/110 (50%), Positives = 75/110 (68%)
Frame = -3 / +1
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
+V TFS+GT++ ILHGGA+Y+AT RGFVV+H F+ENY LY+R HF+KA+E+ +
Sbjct: 295 TVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVKHIKFSENYRLYSRSHFVKAMEVIL 474
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+L VY A+ + YI SSWFL VSW+ AP+ F +GF+W K V
Sbjct: 475 LLVVYLAYGNDEAGAVSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVV 624
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 141 bits (302), Expect = 9e-033
Identities = 55/110 (50%), Positives = 75/110 (68%)
Frame = -3 / +1
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
+V TFS+GT++ ILHGGA+Y+AT RGFVV+H F+ENY LY+R HF+KA+E+ +
Sbjct: 4780 TVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVKHIKFSENYRLYSRSHFVKAMEVIL 4959
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+L VY A+ + YI SSWFL VSW+ AP+ F +GF+W K V
Sbjct: 4960 LLVVYLAYGNDEAGAVSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVV 5109
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 139 bits (299), Expect = 2e-032
Identities = 55/110 (50%), Positives = 74/110 (67%)
Frame = -3 / +3
Query: 331 SVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGI 152
+V TFS+GT++ ILHGGA Y+AT RGFVV+H F+ENY LY+R HF+KA+E+ +
Sbjct: 66 TVFFTFSLGTRTHYFGRTILHGGAMYQATGRGFVVKHIKFSENYRLYSRSHFVKAMEVIL 245
Query: 151 ILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
+L VY A+ + YI SSWFL VSW+ AP+ F +GF+W K V
Sbjct: 246 LLVVYLAYGNDEAGAVSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVV 395
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 4819 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 4998
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 4999 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 5151
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 4534 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 4713
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 4714 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 4866
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 51 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 230
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 231 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 383
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 4534 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 4713
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 4714 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 4866
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 138 bits (295), Expect = 8e-032
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -3 / +1
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK+ +LHGGAKYR+T RGFVV H FA+NY LY+R HF+K +E+ ++
Sbjct: 4966 VFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLL 5145
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L VY + L Y+ S WF+V +W+ APF F SGF+W K V
Sbjct: 5146 LVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIV 5292
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 51 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 230
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 231 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 383
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / -1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 30707 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 30528
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 30527 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 30375
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / -2
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 81256 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 81077
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 81076 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 80924
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / -3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 90709 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 90530
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 90529 ILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 90377
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 1227 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 1406
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 1407 ILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 1559
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 138 bits (295), Expect = 8e-032
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -3 / -2
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK+ +LHGGAKYR+T RGFVV H FA+NY LY+R HF+K +E+ ++
Sbjct: 3924720 VFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLL 3924541
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L VY + L Y+ S WF+V +W+ APF F SGF+W K V
Sbjct: 3924540 LVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIV 3924394
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 138 bits (295), Expect = 8e-032
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -3 / -3
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK+ +LHGGAKYR+T RGFVV H FA+NY LY+R HF+K +E+ ++
Sbjct: 63561 VFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLL 63382
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L VY + L Y+ S WF+V +W+ APF F SGF+W K V
Sbjct: 63381 LVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIV 63235
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 4837 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 5016
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 5017 ILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 5169
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 138 bits (295), Expect = 8e-032
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -3 / +2
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK+ +LHGGAKYR+T RGFVV H FA+NY LY+R HF+K +E+ ++
Sbjct: 5108 VFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLL 5287
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L VY + L Y+ S WF+V +W+ APF F SGF+W K V
Sbjct: 5288 LVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIV 5434
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 138 bits (295), Expect = 8e-032
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -3 / +1
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H FAENY Y+R HF+K IEL
Sbjct: 4819 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELM 4998
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+W K V
Sbjct: 4999 ILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIV 5151
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 138 bits (295), Expect = 8e-032
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -3 / -3
Query: 328 VXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELGII 149
V TFS+GTK+ +LHGGAKYR+T RGFVV H FA+NY LY+R HF+K +E+ ++
Sbjct: 4111747 VFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLL 4111568
Query: 148 LTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
L VY + L Y+ S WF+V +W+ APF F SGF+W K V
Sbjct: 4111567 LVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIV 4111421
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 127 bits (273), Expect = 9e-029
Identities = 53/111 (47%), Positives = 67/111 (60%)
Frame = -3 / +3
Query: 334 SSVXXTFSMGTKSXXXDXXILHGGAKYRATXRGFVVQHKSFAENYXLYARGHFIKAIELG 155
+SV TF +GTK+ + HGGA+YR T RGFVV H AENY Y+R HF+K IEL
Sbjct: 273 ASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKIAENYRFYSRSHFVKGIELM 452
Query: 154 IILTVYAAHSVIAKNTLVYIXXXXSSWFLVVSWIMAPFAFXXSGFDWLKTV 2
I+L VY + + YI S WF+VV+W+ APF F SGF+ K V
Sbjct: 453 ILLLVY*IFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFELQKIV 605
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 596,369,563
Number of Sequences: 1013581
Number of extensions: 6055966
Number of successful extensions: 165132
Number of sequences better than 1.0e-020: 68
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 14706369323
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)