TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH2g03.yg.2.1
(537 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 117 2e-064
emb|AX651854.1| Sequence 720 from Patent WO03000898 117 2e-064
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 106 5e-062
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 106 6e-061
emb|AX412747.1| Sequence 511 from Patent WO0222675 106 6e-061
emb|AX508002.1| Sequence 2697 from Patent WO0216655 106 6e-061
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 106 2e-060
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 137 2e-055
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 99 3e-051
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 99 3e-051
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 99 3e-051
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 95 5e-050
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 106 5e-049
gb|AU238195.1|AU238195 AU238195 RAFL16 Arabidopsis thaliana... 106 2e-047
gb|AU237455.1|AU237455 AU237455 RAFL16 Arabidopsis thaliana... 106 3e-046
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 76 6e-038
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 76 7e-037
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 93 5e-035
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 92 6e-034
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 76 3e-033
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 70 4e-033
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 76 6e-033
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 70 6e-032
gb|BP804883.1|BP804883 BP804883 RAFL16 Arabidopsis thaliana... 100 1e-031
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 84 7e-031
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 86 7e-031
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 86 8e-031
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 86 8e-031
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 86 8e-031
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 86 8e-031
emb|AX506240.1| Sequence 935 from Patent WO0216655 86 8e-031
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 69 3e-030
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 69 1e-029
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 85 4e-028
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 85 4e-028
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 85 4e-028
emb|AX059538.1| Sequence 271 from Patent WO0055325 85 4e-028
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 85 4e-028
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 68 8e-027
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 68 1e-024
gb|B08281.1|B08281 F6D9-T7 IGF Arabidopsis thaliana genomic... 68 7e-024
gb|CL478670.1|CL478670 SAIL_294_D06.v1 SAIL Collection Arab... 70 2e-021
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 117 bits (251), Expect(4) = 2e-064
Identities = 50/70 (71%), Positives = 55/70 (78%)
Frame = +3 / +2
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFTYVVSCQ YGI KRS +P A DILRLMT YPSLRVAYIDEVE P KD
Sbjct: 3917 LWAQCQAVADMKFTYVVSCQQYGIHKRSGDPRAQDILRLMTRYPSLRVAYIDEVEEPVKD 4096
Query: 285 RIKKIEKVYY 314
+ KK + Y
Sbjct: 4097 KSKKGNQKVY 4126
Score = 105 bits (224), Expect(4) = 2e-064
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3 / +2
Query: 360 QSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
Q+LDQVIY+I+LPG AIL EGKPENQ HAIIF+R QTIDMNQ++YMEE LKM NLL
Sbjct: 4178 QNLDQVIYRIRLPGPAILGEGKPENQNHAIIFSRGEGLQTIDMNQDNYMEEALKMRNLL 4354
Score = 82.6 bits (174), Expect(3) = 2e-030
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -3 / -3
Query: 274 GASTSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
G+STSSI AT S+GY VISL ISCA+GS +R IPY H+TTYVNFMSA A H
Sbjct: 4086 GSSTSSIYATRSEGYLVISLNISCARGSPDRLWIPYC*HDTTYVNFMSATAWH 3928
Score = 57.9 bits (120), Expect(4) = 2e-064
Identities = 23/33 (69%), Positives = 31/33 (93%)
Frame = +3 / +2
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA ++DLM+GY+A+E+ SE++
Sbjct: 3800 YRKALELQAFLDMAMHEDLMEGYKAVELNSENN 3898
Score = 46.4 bits (95), Expect(3) = 2e-030
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -3 / -3
Query: 535 SRXLIFXXXXXXXXXXXXIVXXXSXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SR 365
S+ LIF IV S R +IA WFSGFPS ++A PGS IL*+T SR
Sbjct: 4353 SKFLIFNASSM*LS*FISIVCKPSPREKMIA*FWFSGFPSPRIAGPGSLIL*ITWSR 4183
Score = 42.8 bits (87), Expect(3) = 2e-030
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 94 SDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
S+ +S AL*P I+SS +A+SR A*SSKAFR*
Sbjct: 3891 SEFSSTAL*PSIKSSCIAMSRNA*SSKAFR* 3799
Score = 24.0 bits (46), Expect(4) = 2e-064
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 300 EKVYYSVLVK 329
+KVYYSVLVK
Sbjct: 4115 QKVYYSVLVK 4144
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 117 bits (251), Expect(4) = 2e-064
Identities = 50/70 (71%), Positives = 55/70 (78%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFTYVVSCQ YGI KRS +P A DILRLMT YPSLRVAYIDEVE P KD
Sbjct: 3775 LWAQCQAVADMKFTYVVSCQQYGIHKRSGDPRAQDILRLMTRYPSLRVAYIDEVEEPVKD 3954
Query: 285 RIKKIEKVYY 314
+ KK + Y
Sbjct: 3955 KSKKGNQKVY 3984
Score = 105 bits (224), Expect(4) = 2e-064
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +3 / +1
Query: 360 QSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
Q+LDQVIY+I+LPG AIL EGKPENQ HAIIF+R QTIDMNQ++YMEE LKM NLL
Sbjct: 4036 QNLDQVIYRIRLPGPAILGEGKPENQNHAIIFSRGEGLQTIDMNQDNYMEEALKMRNLL 4212
Score = 82.6 bits (174), Expect(3) = 2e-030
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -3 / -2
Query: 274 GASTSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
G+STSSI AT S+GY VISL ISCA+GS +R IPY H+TTYVNFMSA A H
Sbjct: 3944 GSSTSSIYATRSEGYLVISLNISCARGSPDRLWIPYC*HDTTYVNFMSATAWH 3786
Score = 57.9 bits (120), Expect(4) = 2e-064
Identities = 23/33 (69%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA ++DLM+GY+A+E+ SE++
Sbjct: 3658 YRKALELQAFLDMAMHEDLMEGYKAVELNSENN 3756
Score = 46.4 bits (95), Expect(3) = 2e-030
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -3 / -2
Query: 535 SRXLIFXXXXXXXXXXXXIVXXXSXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SR 365
S+ LIF IV S R +IA WFSGFPS ++A PGS IL*+T SR
Sbjct: 4211 SKFLIFNASSM*LS*FISIVCKPSPREKMIA*FWFSGFPSPRIAGPGSLIL*ITWSR 4041
Score = 42.8 bits (87), Expect(3) = 2e-030
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -3 / -2
Query: 94 SDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
S+ +S AL*P I+SS +A+SR A*SSKAFR*
Sbjct: 3749 SEFSSTAL*PSIKSSCIAMSRNA*SSKAFR* 3657
Score = 24.0 bits (46), Expect(4) = 2e-064
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 300 EKVYYSVLVK 329
+KVYYSVLVK
Sbjct: 3973 QKVYYSVLVK 4002
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 106 bits (226), Expect(4) = 5e-062
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQVIY+IKLPG AIL EGKPENQ H+IIFTR QTIDMNQ++YMEE KM
Sbjct: 3901 SESVQTLDQVIYRIKLPGPAILGEGKPENQNHSIIFTRGEGLQTIDMNQDNYMEEAFKMR 4080
Query: 528 NLL 536
NLL
Sbjct: 4081 NLL 4089
Score = 103 bits (219), Expect(4) = 5e-062
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFT+VVSCQ Y +QKRS + A DILRLMT YPSLRVAYIDEVE K+
Sbjct: 3643 LWAQCQALADMKFTFVVSCQQYSVQKRSGDQRAKDILRLMTTYPSLRVAYIDEVEQTHKE 3822
Query: 285 RIKKIEKVYY 314
K ++ Y
Sbjct: 3823 SYKGADEKIY 3852
Score = 69.3 bits (145), Expect(3) = 5e-024
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = -3 / -2
Query: 268 STSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH* 113
STSSI*AT DGY VISL +S A+ S + F* Y WHETT VNFMSA A H*
Sbjct: 3806 STSSI*ATRRDGYVVISLNMSFARWSPDLF*TLYCWHETTKVNFMSASA*H* 3651
Score = 62.0 bits (129), Expect(4) = 5e-062
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA +++LMKGY+A+E+ SED+
Sbjct: 3526 YRKALELQAFLDMAKDEELMKGYKALELTSEDA 3624
Score = 42.3 bits (86), Expect(3) = 5e-024
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = -3 / -2
Query: 97 SSDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
SS + S AL PFI SS AISRKA SSKAFR*
Sbjct: 3620 SSLVNSRALYPFINSSSFAISRKAWSSKAFR* 3525
Score = 38.6 bits (78), Expect(3) = 5e-024
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -3 / -2
Query: 466 SXRVNIIAWXWFSGFPSXKMALPGSFIL*MT 374
S RV +I W FSGFPS +A PGS I MT
Sbjct: 4019 SPRVKMIEWF*FSGFPSPSIAGPGSLIRYMT 3927
Score = 25.4 bits (49), Expect(4) = 5e-062
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 3841 EKIYYSALVKAA 3876
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 106 bits (226), Expect(4) = 6e-061
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQ+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ++YMEE KM
Sbjct: 3883 SESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMR 4062
Query: 528 NLL 536
NLL
Sbjct: 4063 NLL 4071
Score = 102 bits (218), Expect(4) = 6e-061
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYID 260
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT YPS+RVAYID
Sbjct: 3601 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVAYID 3780
Query: 261 EVEAPSKDRIKKIEKVYY 314
EVE K+ K E+ Y
Sbjct: 3781 EVEQTHKESYKGTEEKIY 3834
Score = 58.8 bits (122), Expect(4) = 6e-061
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA +++L+KGY+A+E+ SE++
Sbjct: 3508 YRKALELQAFLDMAKDEELLKGYKALELTSEEA 3606
Score = 56.1 bits (116), Expect(3) = 3e-023
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -3 / -3
Query: 268 STSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
STSSI*AT DGY VISL +S A+ S + *I Y ETT VNF+SA A H
Sbjct: 3788 STSSI*ATRIDGYVVISLNMSLARWSPDLL*ILYC*QETTKVNFISASA*H 3636
Score = 47.8 bits (98), Expect(3) = 3e-023
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -3 / -3
Query: 466 SXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SRL*PGS 350
S RVN+IAW FSGFPS +A PGS I *M+*S +* S
Sbjct: 4001 SPRVNMIAWF*FSGFPSPSIAGPGSLIR*MS*SSV*TDS 3885
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 97 SSDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
SS + S AL*PF SS AISRKA*SSKAFR*
Sbjct: 3602 SSLVNSRAL*PFNNSSSFAISRKA*SSKAFR* 3507
Score = 25.4 bits (49), Expect(4) = 6e-061
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 3823 EKIYYSALVKAA 3858
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 106 bits (226), Expect(4) = 6e-061
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQ+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ++YMEE KM
Sbjct: 3736 SESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMR 3915
Query: 528 NLL 536
NLL
Sbjct: 3916 NLL 3924
Score = 102 bits (218), Expect(4) = 6e-061
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYID 260
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT YPS+RVAYID
Sbjct: 3454 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVAYID 3633
Query: 261 EVEAPSKDRIKKIEKVYY 314
EVE K+ K E+ Y
Sbjct: 3634 EVEQTHKESYKGTEEKIY 3687
Score = 58.8 bits (122), Expect(4) = 6e-061
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA +++L+KGY+A+E+ SE++
Sbjct: 3361 YRKALELQAFLDMAKDEELLKGYKALELTSEEA 3459
Score = 56.1 bits (116), Expect(3) = 3e-023
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -3 / -2
Query: 268 STSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
STSSI*AT DGY VISL +S A+ S + *I Y ETT VNF+SA A H
Sbjct: 3641 STSSI*ATRIDGYVVISLNMSLARWSPDLL*ILYC*QETTKVNFISASA*H 3489
Score = 47.8 bits (98), Expect(3) = 3e-023
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 466 SXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SRL*PGS 350
S RVN+IAW FSGFPS +A PGS I *M+*S +* S
Sbjct: 3854 SPRVNMIAWF*FSGFPSPSIAGPGSLIR*MS*SSV*TDS 3738
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -2
Query: 97 SSDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
SS + S AL*PF SS AISRKA*SSKAFR*
Sbjct: 3455 SSLVNSRAL*PFNNSSSFAISRKA*SSKAFR* 3360
Score = 25.4 bits (49), Expect(4) = 6e-061
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 3676 EKIYYSALVKAA 3711
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 106 bits (226), Expect(4) = 6e-061
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQ+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ++YMEE KM
Sbjct: 3736 SESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMR 3915
Query: 528 NLL 536
NLL
Sbjct: 3916 NLL 3924
Score = 102 bits (218), Expect(4) = 6e-061
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYID 260
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT YPS+RVAYID
Sbjct: 3454 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVAYID 3633
Query: 261 EVEAPSKDRIKKIEKVYY 314
EVE K+ K E+ Y
Sbjct: 3634 EVEQTHKESYKGTEEKIY 3687
Score = 58.8 bits (122), Expect(4) = 6e-061
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA +++L+KGY+A+E+ SE++
Sbjct: 3361 YRKALELQAFLDMAKDEELLKGYKALELTSEEA 3459
Score = 56.1 bits (116), Expect(3) = 3e-023
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -3 / -2
Query: 268 STSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
STSSI*AT DGY VISL +S A+ S + *I Y ETT VNF+SA A H
Sbjct: 3641 STSSI*ATRIDGYVVISLNMSLARWSPDLL*ILYC*QETTKVNFISASA*H 3489
Score = 47.8 bits (98), Expect(3) = 3e-023
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 466 SXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SRL*PGS 350
S RVN+IAW FSGFPS +A PGS I *M+*S +* S
Sbjct: 3854 SPRVNMIAWF*FSGFPSPSIAGPGSLIR*MS*SSV*TDS 3738
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -2
Query: 97 SSDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
SS + S AL*PF SS AISRKA*SSKAFR*
Sbjct: 3455 SSLVNSRAL*PFNNSSSFAISRKA*SSKAFR* 3360
Score = 25.4 bits (49), Expect(4) = 6e-061
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 3676 EKIYYSALVKAA 3711
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 106 bits (226), Expect(4) = 2e-060
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQ+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ++YMEE KM
Sbjct: 3883 SESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMR 4062
Query: 528 NLL 536
NLL
Sbjct: 4063 NLL 4071
Score = 100 bits (214), Expect(4) = 2e-060
Identities = 44/78 (56%), Positives = 52/78 (66%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYID 260
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT YPS+RVAYID
Sbjct: 3601 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVAYID 3780
Query: 261 EVEAPSKDRIKKIEKVYY 314
EVE K+ + E+ Y
Sbjct: 3781 EVEQTHKESYEGAEEKIY 3834
Score = 58.8 bits (122), Expect(4) = 2e-060
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDS 101
YRKALELQAFLDMA +++L+KGY+A+E+ SE++
Sbjct: 3508 YRKALELQAFLDMAKDEELLKGYKALELTSEEA 3606
Score = 56.1 bits (116), Expect(3) = 3e-023
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -3 / -3
Query: 268 STSSI*ATLSDGYSVISLKISCAQGSLERF*IPYSWHETTYVNFMSAIALH 116
STSSI*AT DGY VISL +S A+ S + *I Y ETT VNF+SA A H
Sbjct: 3788 STSSI*ATRIDGYVVISLNMSLARWSPDLL*ILYC*QETTKVNFISASA*H 3636
Score = 47.8 bits (98), Expect(3) = 3e-023
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -3 / -3
Query: 466 SXRVNIIAWXWFSGFPSXKMALPGSFIL*MT*SRL*PGS 350
S RVN+IAW FSGFPS +A PGS I *M+*S +* S
Sbjct: 4001 SPRVNMIAWF*FSGFPSPSIAGPGSLIR*MS*SSV*TDS 3885
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 97 SSDITSIAL*PFIRSSLLAISRKA*SSKAFR* 2
SS + S AL*PF SS AISRKA*SSKAFR*
Sbjct: 3602 SSLVNSRAL*PFNNSSSFAISRKA*SSKAFR* 3507
Score = 25.4 bits (49), Expect(4) = 2e-060
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 3823 EKIYYSALVKAA 3858
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 137 bits (294), Expect(2) = 2e-055
Identities = 58/89 (65%), Positives = 69/89 (77%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQK 182
Y+KALELQAF D+AN +LMKGY++ E S S L +C+A+AD+KFTYVV+CQ Y I K
Sbjct: 3280 YQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHK 3459
Query: 183 RSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
RS + A DIL LMT YPSLRVAYIDEVE
Sbjct: 3460 RSGDQRAKDILTLMTTYPSLRVAYIDEVE 3546
Score = 100 bits (214), Expect(2) = 2e-055
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +3 / +1
Query: 339 TKPNEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXL 518
T ++ G LDQVIY+IKLPG I+ EGKPENQ +AIIFTR QTIDMNQ++Y+EE
Sbjct: 3628 TDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAF 3807
Query: 519 KMXNLL 536
KM NLL
Sbjct: 3808 KMRNLL 3825
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 98.7 bits (209), Expect(4) = 3e-051
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 363 SLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
+LDQ IY+IKLPG A + EGKPENQ HA+IFTR Q IDMNQ+HY+EE LKM NLL
Sbjct: 3970 NLDQEIYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQDHYLEEALKMRNLL 4143
Score = 88.1 bits (186), Expect(4) = 3e-051
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L TQ +A+AD+KFTYV +CQ YG QKRS + A DIL LM PSLRVAYIDEVE
Sbjct: 3745 LYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGG 3924
Query: 285 RIKKI 299
+++K+
Sbjct: 3925 KVQKV 3939
Score = 46.4 bits (95), Expect(4) = 3e-051
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSED 98
YR+AL+LQAFLDMAN +++ GY+A+ +E+
Sbjct: 3628 YRRALKLQAFLDMANETEILAGYKAISEPTEE 3723
Score = 27.2 bits (53), Expect(4) = 3e-051
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 294 KIEKVYYSVLVKA 332
K++KV+YSVL+KA
Sbjct: 3925 KVQKVFYSVLIKA 3963
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 98.7 bits (209), Expect(4) = 3e-051
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 363 SLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
+LDQ IY+IKLPG A + EGKPENQ HA+IFTR Q IDMNQ+HY+EE LKM NLL
Sbjct: 3817 NLDQEIYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQDHYLEEALKMRNLL 3990
Score = 88.1 bits (186), Expect(4) = 3e-051
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L TQ +A+AD+KFTYV +CQ YG QKRS + A DIL LM PSLRVAYIDEVE
Sbjct: 3592 LYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGG 3771
Query: 285 RIKKI 299
+++K+
Sbjct: 3772 KVQKV 3786
Score = 46.4 bits (95), Expect(4) = 3e-051
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSED 98
YR+AL+LQAFLDMAN +++ GY+A+ +E+
Sbjct: 3475 YRRALKLQAFLDMANETEILAGYKAISEPTEE 3570
Score = 27.2 bits (53), Expect(4) = 3e-051
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 294 KIEKVYYSVLVKA 332
K++KV+YSVL+KA
Sbjct: 3772 KVQKVFYSVLIKA 3810
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 98.7 bits (209), Expect(4) = 3e-051
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 363 SLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
+LDQ IY+IKLPG A + EGKPENQ HA+IFTR Q IDMNQ+HY+EE LKM NLL
Sbjct: 3817 NLDQEIYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQDHYLEEALKMRNLL 3990
Score = 88.1 bits (186), Expect(4) = 3e-051
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L TQ +A+AD+KFTYV +CQ YG QKRS + A DIL LM PSLRVAYIDEVE
Sbjct: 3592 LYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGG 3771
Query: 285 RIKKI 299
+++K+
Sbjct: 3772 KVQKV 3786
Score = 46.4 bits (95), Expect(4) = 3e-051
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSED 98
YR+AL+LQAFLDMAN +++ GY+A+ +E+
Sbjct: 3475 YRRALKLQAFLDMANETEILAGYKAISEPTEE 3570
Score = 27.2 bits (53), Expect(4) = 3e-051
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 294 KIEKVYYSVLVKA 332
K++KV+YSVL+KA
Sbjct: 3772 KVQKVFYSVLIKA 3810
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 94.5 bits (200), Expect(4) = 5e-050
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +3 / +1
Query: 369 DQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
DQ IY++KLPG + EGKPENQ HAI+FTR QTIDMNQ+HY+EE KM NLL
Sbjct: 3988 DQEIYRVKLPGPPNIGEGKPENQNHAIVFTRGEALQTIDMNQDHYLEEAFKMRNLL 4155
Score = 94.1 bits (199), Expect(4) = 5e-050
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYID 260
+V + PL Q A+ADMKFTYVVSCQ++G QK S +P A DIL LM +YPSLRVAY++
Sbjct: 3733 DVERSNRPLAAQLDALADMKFTYVVSCQMFGAQKSSGDPHAQDILDLMIKYPSLRVAYVE 3912
Query: 261 EVEAPSKDRIKKI 299
E E D KK+
Sbjct: 3913 EREEIVLDVPKKV 3951
Score = 42.8 bits (87), Expect(4) = 5e-050
Identities = 15/26 (57%), Positives = 25/26 (96%)
Frame = +3 / +1
Query: 6 RKALELQAFLDMANNDDLMKGYRAME 83
R+AL+LQAFLDMA+++D+++GY+ +E
Sbjct: 3664 REALKLQAFLDMADDEDILEGYKDVE 3741
Score = 24.9 bits (48), Expect(4) = 5e-050
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 300 EKVYYSVLVKA 332
+KVYYS+LVKA
Sbjct: 3943 KKVYYSILVKA 3975
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 106 bits (226), Expect(3) = 5e-049
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +3
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQVIY+IKLPG AIL EGKPENQ H+IIFTR QTIDMNQ++YMEE KM
Sbjct: 291 SESVQTLDQVIYRIKLPGPAILGEGKPENQNHSIIFTRGEGLQTIDMNQDNYMEEAFKMR 470
Query: 528 NLL 536
NLL
Sbjct: 471 NLL 479
Score = 103 bits (219), Expect(3) = 5e-049
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +3 / +3
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFT+VVSCQ Y +QKRS + A DILRLMT YPSLRVAYIDEVE K+
Sbjct: 33 LWAQCQALADMKFTFVVSCQQYSVQKRSGDQRAKDILRLMTTYPSLRVAYIDEVEQTHKE 212
Query: 285 RIKKIEKVYY 314
K ++ Y
Sbjct: 213 SYKGADEKIY 242
Score = 25.4 bits (49), Expect(3) = 5e-049
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 231 EKIYYSALVKAA 266
>gb|AU238195.1|AU238195 AU238195 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-92-B13 5',
mRNA sequence
Length = 645
Score = 106 bits (226), Expect(2) = 2e-047
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +3
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQVIY+IKLPG AIL EGKPENQ H+IIFTR QTIDMNQ++YMEE KM
Sbjct: 294 SESVQTLDQVIYRIKLPGPAILGEGKPENQNHSIIFTRGEGLQTIDMNQDNYMEEAFKMR 473
Query: 528 NLL 536
NLL
Sbjct: 474 NLL 482
Score = 104 bits (222), Expect(2) = 2e-047
Identities = 47/82 (57%), Positives = 57/82 (69%)
Frame = +3 / +1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFT+VVSCQ Y +QKRS + A DILRLMT YPSLRVAYIDEVE K
Sbjct: 37 LWAQCQALADMKFTFVVSCQQYSVQKRSGDQRAKDILRLMTTYPSLRVAYIDEVEQNIKK 216
Query: 285 RIKKIEKVYYSVLVKASVTKPN 350
IK K + + + + +PN
Sbjct: 217 AIKGQTKKFTTQPLSKLLRRPN 282
>gb|AU237455.1|AU237455 AU237455 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-N18 5',
mRNA sequence
Length = 661
Score = 106 bits (226), Expect(3) = 3e-046
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +2
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMX 527
+E Q+LDQ+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ++YMEE KM
Sbjct: 272 SESVQTLDQLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMR 451
Query: 528 NLL 536
NLL
Sbjct: 452 NLL 460
Score = 94.1 bits (199), Expect(3) = 3e-046
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +3 / +2
Query: 120 KAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKDRIKKI 299
K +ADMKFT+VVSCQ Y I KRS + A DILRLMT YPS+RVAYIDEVE K+ K
Sbjct: 29 KHLADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVAYIDEVEQTHKESYKGT 208
Query: 300 EKVYY 314
E+ Y
Sbjct: 209 EEKIY 223
Score = 25.4 bits (49), Expect(3) = 3e-046
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 212 EKIYYSALVKAA 247
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 75.8 bits (159), Expect(6) = 6e-038
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3 / -2
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMT 227
L QC+A+ADMKFTYVVSCQ YGI KRS +P A DILRLMT
Sbjct: 65638 LWAQCQAVADMKFTYVVSCQQYGIHKRSGDPRAQDILRLMT 65516
Score = 72.1 bits (151), Expect(6) = 6e-038
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +3 / -1
Query: 375 VIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQ 494
VIY+I+LPG AIL EGKPENQ HAIIF+R QTIDMNQ
Sbjct: 64934 VIYRIRLPGPAILGEGKPENQNHAIIFSRGEGLQTIDMNQ 64815
Score = 45.1 bits (92), Expect(6) = 6e-038
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3 / -3
Query: 231 YPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
YPSLRVAYIDEVE P KD+ KK + Y
Sbjct: 65439 YPSLRVAYIDEVEEPVKDKSKKGNQKVY 65356
Score = 34.5 bits (69), Expect(6) = 6e-038
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 65852 YRKALELQAFLDMAMHE 65802
Score = 29.0 bits (57), Expect(6) = 6e-038
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 492 QEHYMEEXLKMXNLL 536
Q++YMEE LKM NLL
Sbjct: 64729 QDNYMEEALKMRNLL 64685
Score = 26.3 bits (51), Expect(6) = 6e-038
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +3 / -2
Query: 54 DLMKGYRAMEVMSEDS 101
DLM+GY+A+E+ SE++
Sbjct: 65704 DLMEGYKAVELNSENN 65657
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 76.2 bits (160), Expect(6) = 7e-037
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / -2
Query: 372 QVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQ 494
QVIY+IKLPG AIL EGKPENQ H+IIFTR QTIDMNQ
Sbjct: 92081 QVIYRIKLPGPAILGEGKPENQNHSIIFTRGEGLQTIDMNQ 91959
Score = 71.2 bits (149), Expect(6) = 7e-037
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +3 / -1
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEY 233
L QC+A+ADMKFT+VVSCQ Y +QKRS + A DILRLMT Y
Sbjct: 92658 LWAQCQALADMKFTFVVSCQQYSVQKRSGDQRAKDILRLMTTY 92530
Score = 40.5 bits (82), Expect(6) = 7e-037
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3 / -1
Query: 210 ILRLMTEYPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
+L L YPSLRVAYIDEVE K+ K ++ Y
Sbjct: 92466 LLFLCDRYPSLRVAYIDEVEQTHKESYKGADEKIY 92362
Score = 35.4 bits (71), Expect(6) = 7e-037
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 92862 YRKALELQAFLDMAKDE 92812
Score = 29.5 bits (58), Expect(6) = 7e-037
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3 / -1
Query: 54 DLMKGYRAMEVMSEDS 101
+LMKGY+A+E+ SED+
Sbjct: 92724 ELMKGYKALELTSEDA 92677
Score = 27.2 bits (53), Expect(6) = 7e-037
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 492 QEHYMEEXLKMXNLL 536
Q++YMEE KM NLL
Sbjct: 91861 QDNYMEEAFKMRNLL 91817
>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
Length = 5281
Score = 92.7 bits (196), Expect(2) = 5e-035
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +3 / +1
Query: 369 DQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
D+ IY IKLPG+ L EGKPENQ HAI+FTR QTIDMNQ++Y+EE +KM NLL
Sbjct: 3178 DEEIYSIKLPGDPKLGEGKPENQNHAIVFTRGEAIQTIDMNQDNYLEEAIKMRNLL 3345
Score = 77.1 bits (162), Expect(2) = 5e-035
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3 / +1
Query: 114 QCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKDRIK 293
+ +A AD+KFTYVVSCQ+YG QK+ +P A DI L+ Y +LRVA+I + + D
Sbjct: 2944 EARAQADLKFTYVVSCQIYGQQKQQKKPEATDIGLLLQRYEALRVAFIHSEDVGNGDGGS 3123
Query: 294 KIEKVYYSVLVKASVTKPNE 353
+K +YS LVKA + +E
Sbjct: 3124 GGKKEFYSKLVKADIHGKDE 3183
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 92.3 bits (195), Expect(2) = 6e-034
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +3 / +1
Query: 369 DQVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
D+ IY IKLPG+ L EGKPENQ HAI+FTR QTIDMNQ++Y EE LKM NLL
Sbjct: 3865 DKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAIQTIDMNQDNYFEEALKMRNLL 4032
Score = 73.9 bits (155), Expect(2) = 6e-034
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3 / +1
Query: 90 SEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
+E L + +A AD+KFTYVV+CQ+YG QK +P A DI LM +LR+AYID V+
Sbjct: 3616 AEGFELSPEARAQADLKFTYVVTCQIYGRQKEDQKPEAVDIALLMQRNEALRIAYIDVVD 3795
Query: 270 APSKDR 287
+P + +
Sbjct: 3796 SPKEGK 3813
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 76.2 bits (160), Expect(5) = 3e-033
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / -1
Query: 372 QVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQ 494
Q+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ
Sbjct: 82652 QLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQ 82530
Score = 67.5 bits (141), Expect(5) = 3e-033
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / -2
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMT 227
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT
Sbjct: 83203 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMT 83057
Score = 38.6 bits (78), Expect(5) = 3e-033
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3 / -3
Query: 231 YPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
YPS+RVAYIDEVE K+ K E+ Y
Sbjct: 82959 YPSIRVAYIDEVEQTHKESYKGTEEKIY 82876
Score = 35.4 bits (71), Expect(5) = 3e-033
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -2
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 83380 YRKALELQAFLDMAKDE 83330
Score = 26.3 bits (51), Expect(5) = 3e-033
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +3 / -2
Query: 54 DLMKGYRAMEVMSEDS 101
+L+KGY+A+E+ SE++
Sbjct: 83245 ELLKGYKALELTSEEA 83198
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 69.8 bits (146), Expect(5) = 4e-033
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +3 / +1
Query: 405 AILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
A + EGKPENQ HAIIFTR QTIDMNQ++Y EE K+ N+L
Sbjct: 3889 AEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKLRNVL 4020
Score = 48.3 bits (99), Expect(5) = 4e-033
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +3 / +1
Query: 114 QCKAIADMKFTYVVSCQLYGIQKRSNE 194
+ +A+AD+KFTYVVSCQ+YG QK+S +
Sbjct: 3616 RARALADLKFTYVVSCQVYGNQKKSGD 3696
Score = 44.1 bits (90), Expect(5) = 4e-033
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 189 NEPCAHDILRLMTEYPSLRVAYIDEVEAPSKDRIKKI 299
N C +IL+LM +YPSLRVAY+DE E + + K+
Sbjct: 3703 NRSCYTNILQLMLKYPSLRVAYVDEREETADAKSPKV 3813
Score = 27.2 bits (53), Expect(5) = 4e-033
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANNDDLMKGYRAMEVMSED 98
YR+ALELQ + ++A +RAM E+
Sbjct: 3502 YRQALELQCYQEVAGEQAEFSVFRAMASNDEN 3597
Score = 26.3 bits (51), Expect(5) = 4e-033
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 357 GQSLDQVIYKIKLPG 401
G D+ IY+IKLPG
Sbjct: 3838 GDKFDEEIYRIKLPG 3882
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 76.2 bits (160), Expect(5) = 6e-033
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / -3
Query: 372 QVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQ 494
Q+IY+IKLPG AIL EGKPENQ HAIIFTR QTIDMNQ
Sbjct: 32103 QLIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQ 31981
Score = 67.5 bits (141), Expect(5) = 6e-033
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / -1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMT 227
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT
Sbjct: 32654 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMT 32508
Score = 38.6 bits (78), Expect(5) = 6e-033
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 231 YPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
YPS+RVAYIDEVE K+ K E+ Y
Sbjct: 32410 YPSIRVAYIDEVEQTHKESYKGTEEKIY 32327
Score = 35.4 bits (71), Expect(5) = 6e-033
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 32831 YRKALELQAFLDMAKDE 32781
Score = 26.3 bits (51), Expect(5) = 6e-033
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +3 / -1
Query: 54 DLMKGYRAMEVMSEDS 101
+L+KGY+A+E+ SE++
Sbjct: 32696 ELLKGYKALELTSEEA 32649
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 69.8 bits (146), Expect(5) = 6e-032
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 411 LXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
+ EGKPENQ HAIIFTR QTIDMNQ++Y EE KM N+L
Sbjct: 3892 IGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEECFKMRNVL 4017
Score = 50.1 bits (103), Expect(5) = 6e-032
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = +3 / +1
Query: 114 QCKAIADMKFTYVVSCQLYGIQKRSNE 194
+ +A+AD+KFTYVVSCQ+YG QK+S+E
Sbjct: 3613 RARALADLKFTYVVSCQVYGNQKKSSE 3693
Score = 44.1 bits (90), Expect(5) = 6e-032
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3 / +1
Query: 198 CAHDILRLMTEYPSLRVAYIDEVEAPSKDRIKKI 299
C ++IL+LM +YPSLRVAYIDE E + +K+
Sbjct: 3709 CYNNILQLMLKYPSLRVAYIDEREETVNGKSQKV 3810
Score = 25.4 bits (49), Expect(5) = 6e-032
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 366 LDQVIYKIKLPG 401
LD+ IY+IKLPG
Sbjct: 3844 LDEEIYRIKLPG 3879
Score = 22.1 bits (42), Expect(5) = 6e-032
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 294 KIEKVYYSVLVK 329
K +KV+YSVL+K
Sbjct: 3796 KSQKVFYSVLLK 3831
>gb|BP804883.1|BP804883 BP804883 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-03-K06 5',
mRNA sequence
Length = 385
Score = 99.6 bits (211), Expect(3) = 1e-031
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +3 / +3
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEAPSKD 284
L QC+A+ADMKFT+VVSCQ Y +QKRS + A DILRLMT YPSLRVAYI+EVE K
Sbjct: 36 LWAQCQALADMKFTFVVSCQQYSVQKRSGDQRAKDILRLMTTYPSLRVAYIEEVEQNIKK 215
Query: 285 RIK 293
IK
Sbjct: 216 AIK 224
Score = 55.1 bits (114), Expect(3) = 1e-031
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 348 NEPGQSLDQVIYKIKLPGNAILXEGKPENQ 437
+E Q+LDQVIY+IKLPG AIL EGKPENQ
Sbjct: 292 SESVQTLDQVIYRIKLPGPAILGEGKPENQ 381
Score = 20.3 bits (38), Expect(3) = 1e-031
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / +2
Query: 300 EKVYYSVLVK 329
EK+YYS L K
Sbjct: 233 EKIYYSALSK 262
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 83.5 bits (176), Expect(4) = 7e-031
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = +3 / +3
Query: 54 DLMKGYRAMEVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEY 233
+LMKGY++ E S S L +C+A+AD+KFTYVV+CQ Y I KRS + A DIL LMT Y
Sbjct: 60156 ELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTY 60335
Query: 234 PSLRVAYIDEVEAPSKDR 287
Y ++ PS R
Sbjct: 60336 AFFHHNY*FDLLFPSHIR 60389
Score = 71.2 bits (149), Expect(4) = 7e-031
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3 / +2
Query: 372 QVIYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQ 494
QVIY+IKLPG I+ EGKPENQ +AIIFTR QTIDMNQ
Sbjct: 60782 QVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQ 60904
Score = 31.8 bits (63), Expect(4) = 7e-031
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 3 YRKALELQAFLDMAN 47
Y+KALELQAF D+AN
Sbjct: 60023 YQKALELQAFFDLAN 60067
Score = 25.8 bits (50), Expect(4) = 7e-031
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 492 QEHYMEEXLKMXNLL 536
Q++Y+EE KM NLL
Sbjct: 61031 QDYYIEEAFKMRNLL 61075
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 85.8 bits (181), Expect(2) = 7e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / +3
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 1575897 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 1576055
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 2539336 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 2539494
Score = 69.8 bits (146), Expect(2) = 7e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / +3
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 1575690 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 1575827
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / +1
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 2539123 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 2539263
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
Length = 159629
Score = 85.8 bits (181), Expect(2) = 8e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 37801 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 37959
Score = 69.8 bits (146), Expect(2) = 8e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / +1
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 37594 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 37731
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
sequence
Length = 116448
Score = 85.8 bits (181), Expect(2) = 8e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / +3
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 16524 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 16682
Score = 69.8 bits (146), Expect(2) = 8e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / +3
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 16317 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 16454
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM,
complete sequence
Length = 95519
Score = 85.8 bits (181), Expect(2) = 8e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / -1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 15260 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 15102
Score = 69.8 bits (146), Expect(2) = 8e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / -1
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 15467 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 15330
>ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTHASE-LIKE 5);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT4G03550 (ATGSL05) mRNA, complete cds
Length = 5835
Score = 85.8 bits (181), Expect(2) = 8e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 3577 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 3735
Score = 69.8 bits (146), Expect(2) = 8e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / +1
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 3370 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 3507
>emb|AX506240.1| Sequence 935 from Patent WO0216655
Length = 5273
Score = 85.8 bits (181), Expect(2) = 8e-031
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3 / +3
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
I+++KLPG L EGKPENQ HA+IFTR QTIDMNQ+ Y EE LKM NLL
Sbjct: 3342 IFRVKLPGPVKLGEGKPENQNHAMIFTRGDAVQTIDMNQDSYFEEALKMRNLL 3500
Score = 69.8 bits (146), Expect(2) = 8e-031
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / +3
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 3135 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 3272
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 69.3 bits (145), Expect(4) = 3e-030
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNL 533
IY+IKLPG A + EGKPENQ HA+IFTR Q IDMNQ Y N+
Sbjct: 11905 IYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQVKYFPPTESFHNI 12060
Score = 58.8 bits (122), Expect(4) = 3e-030
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3 / +3
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTE 230
L TQ +A+AD+KFTYV +CQ YG QKRS + A DIL LM +
Sbjct: 11487 LYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVK 11612
Score = 33.6 bits (67), Expect(4) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3 / +2
Query: 234 PSLRVAYIDEVEAPSKDRIKKI 299
PSLRVAYIDEVE +++K+
Sbjct: 11696 PSLRVAYIDEVEEREGGKVQKV 11761
Score = 27.2 bits (53), Expect(4) = 3e-030
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 294 KIEKVYYSVLVKA 332
K++KV+YSVL+KA
Sbjct: 11747 KVQKVFYSVLIKA 11785
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 69.3 bits (145), Expect(4) = 1e-029
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = +3 / +3
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNL 533
IY+IKLPG A + EGKPENQ HA+IFTR Q IDMNQ Y N+
Sbjct: 94107 IYRIKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQVKYFPPTESFHNI 94262
Score = 58.8 bits (122), Expect(4) = 1e-029
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3 / +2
Query: 105 LKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTE 230
L TQ +A+AD+KFTYV +CQ YG QKRS + A DIL LM +
Sbjct: 93689 LYTQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVK 93814
Score = 32.7 bits (65), Expect(4) = 1e-029
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 234 PSLRVAYIDEVEAPSKDRIKKI 299
PSLRVAYIDEVE ++ K+
Sbjct: 93898 PSLRVAYIDEVEEREGGKVXKV 93963
Score = 25.8 bits (50), Expect(4) = 1e-029
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 294 KIEKVYYSVLVKA 332
K+ KV+YSVL+KA
Sbjct: 93949 KVXKVFYSVLIKA 93987
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +2
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 72533 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 72691
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / +2
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 72320 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 72460
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 180576 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 180418
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / -1
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 180789 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 180649
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 11008 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 11166
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / +1
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 10795 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 10935
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +2
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 1511 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 1669
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / +2
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 1298 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 1438
>ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHASE LIKE-1); 1,3-beta-glucan
synthase/ transferase, transferring glycosyl groups
AT4G04970 (ATGSL1) mRNA, complete cds
Length = 5827
Score = 85.4 bits (180), Expect(2) = 4e-028
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYMEEXLKMXNLL 536
IY+I+LPG L EGKPENQ HA+IFTR QTIDMNQ+++ EE LKM NLL
Sbjct: 3391 IYRIRLPGPLKLGEGKPENQNHALIFTRGDAIQTIDMNQDNHFEEALKMRNLL 3549
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3 / +1
Query: 129 ADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVE 269
A MKFTYVV+CQ+YG K + A +IL LM + +LR+AY+DEV+
Sbjct: 3178 AMMKFTYVVACQVYGQHKARGDHRAEEILFLMKNHDALRIAYVDEVD 3318
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 67.5 bits (141), Expect(5) = 8e-027
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / -3
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMT 227
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT
Sbjct: 1651006 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMT 1650860
Score = 38.6 bits (78), Expect(5) = 8e-027
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 231 YPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
YPS+RVAYIDEVE K+ K E+ Y
Sbjct: 1650762 YPSIRVAYIDEVEQTHKESYKGTEEKIY 1650679
Score = 35.4 bits (71), Expect(5) = 8e-027
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -3
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 1651183 YRKALELQAFLDMAKDE 1651133
Score = 26.3 bits (51), Expect(5) = 8e-027
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +3 / -3
Query: 54 DLMKGYRAMEVMSEDS 101
+L+KGY+A+E+ SE++
Sbjct: 1651048 ELLKGYKALELTSEEA 1651001
Score = 25.4 bits (49), Expect(5) = 8e-027
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 300 EKVYYSVLVKAS 335
EK+YYS LVKA+
Sbjct: 1650690 EKIYYSALVKAA 1650655
>dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE1
Length = 84462
Score = 67.5 bits (141), Expect(4) = 1e-024
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3 / +1
Query: 378 IYKIKLPGNAILXEGKPENQXHAIIFTRXXXXQTIDMNQEHYM 506
IY++KLPG + EGKPENQ HAI+FTR QTIDMNQ ++
Sbjct: 28048 IYRVKLPGPPNIGEGKPENQNHAIVFTRGEALQTIDMNQVSFL 28176
Score = 67.0 bits (140), Expect(4) = 1e-024
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLM 224
+V + PL Q A+ADMKFTYVVSCQ++G QK S +P A DIL LM
Sbjct: 27589 DVERSNRPLAAQLDALADMKFTYVVSCQMFGAQKSSGDPHAQDILDLM 27732
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 6 RKALELQAFLDMANNDDL 59
R+AL+LQAFLDMA+++ L
Sbjct: 27443 REALKLQAFLDMADDEGL 27496
Score = 26.7 bits (52), Expect(4) = 1e-024
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 495 EHYMEEXLKMXNLL 536
+HY+EE KM NLL
Sbjct: 28245 DHYLEEAFKMRNLL 28286
>gb|B08281.1|B08281 F6D9-T7 IGF Arabidopsis thaliana genomic clone F6D9, DNA sequence
Length = 1173
Score = 67.5 bits (141), Expect(5) = 7e-024
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / +1
Query: 81 EVMSEDSPLKTQCKAIADMKFTYVVSCQLYGIQKRSNEPCAHDILRLMT 227
E L QC+A+ADMKFT+VVSCQ Y I KRS + A DILRLMT
Sbjct: 292 EASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMT 438
Score = 35.4 bits (71), Expect(5) = 7e-024
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / +1
Query: 3 YRKALELQAFLDMANND 53
YRKALELQAFLDMA ++
Sbjct: 115 YRKALELQAFLDMAKDE 165
Score = 31.3 bits (62), Expect(5) = 7e-024
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 231 YPSLRVAYIDEVEAPSKDRIKKIEKVYY 314
YPS+RVAYIDEV+ D +++ Y
Sbjct: 536 YPSIRVAYIDEVKHTHIDSYNGNDEMIY 619
Score = 26.3 bits (51), Expect(5) = 7e-024
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +3 / +1
Query: 54 DLMKGYRAMEVMSEDS 101
+L+KGY+A+E+ SE++
Sbjct: 250 ELLKGYKALELTSEEA 297
Score = 23.1 bits (44), Expect(5) = 7e-024
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 300 EKVYYSVLVKASV 338
E +YYS LVKA++
Sbjct: 608 EMIYYSALVKAAL 646
>gb|CL478670.1|CL478670 SAIL_294_D06.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_294_D06.v1, DNA sequence
Length = 961
Score = 69.8 bits (146), Expect(3) = 2e-021
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3 / -1
Query: 135 MKFTYVVSCQLYGIQKRSNEPCAHDILRLMTEYPSLRVAYIDEVEA 272
MKFTYVV+CQ+YG QK EP A +IL LM + +LR+AY+DEV A
Sbjct: 454 MKFTYVVACQIYGSQKAKKEPQAEEILYLMKQNEALRIAYVDEVPA 317
Score = 43.2 bits (88), Expect(3) = 2e-021
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 441 HAIIFTRXXXXQTIDMNQEHYMEEXLKM 524
HA+IF R Q+IDMNQ+ Y EE LKM
Sbjct: 181 HAMIFPRGDAVQSIDMNQDSYFEEALKM 98
Score = 28.6 bits (56), Expect(3) = 2e-021
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 384 KIKLPGNAILXEGKPEN 434
++++PG+ L EGKPEN
Sbjct: 239 RVEIPGSGNLGEGKPEN 189
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 906,737,534
Number of Sequences: 1013581
Number of extensions: 10721383
Number of successful extensions: 132301
Number of sequences better than 1.0e-020: 47
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 30409700205
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)