TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCF7a10.yg.2.1
(523 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA 199 5e-062
ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); ca... 199 5e-062
ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catal... 199 5e-062
gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 199 5e-062
gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimeras... 199 5e-062
gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein... 199 5e-062
gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 199 5e-062
emb|AX506245.1| Sequence 940 from Patent WO0216655 199 5e-062
emb|AX651855.1| Sequence 721 from Patent WO03000898 199 5e-062
gb|AY133709.1| Arabidopsis thaliana clone C103301 putative ... 192 6e-061
ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glu... 192 6e-061
emb|AX506164.1| Sequence 859 from Patent WO0216655 192 6e-061
emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cD... 113 3e-055
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 89 6e-053
gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5... 89 6e-053
ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN... 166 5e-052
gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I... 86 5e-051
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 84 1e-047
emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosom... 84 1e-047
emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome ... 84 1e-047
dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosom... 81 2e-043
gb|CC795106.1|CC795106 SALK_069746.55.40.x Arabidopsis thal... 89 9e-024
gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA,... 65 4e-022
ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalyt... 65 4e-022
>gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA
Length = 1924
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 426 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 605
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 606 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 764
Score = 128 bits (275), Expect(2) = 1e-037
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -1
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 748 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 569
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 568 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 425
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 750 AKAVNKIFTENAFDAVMHFAAGAYVGESTQFP 845
Score = 49.6 bits (102), Expect(2) = 1e-037
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -1
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 844 GNCVLSPTYAPAAKCITASKAFSVNILLT 758
>ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.2 mRNA, complete cds
Length = 1900
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 472 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 651
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 652 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 810
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -3
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 794 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 615
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 614 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 471
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 796 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 891
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 890 GNCVLSPTYATAAKCITASKAFSVNILLT 804
>ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.1 mRNA, complete cds
Length = 1884
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 426 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 605
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 606 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 764
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -3
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 748 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 569
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 568 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 425
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 750 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 845
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 844 GNCVLSPTYATAAKCITASKAFSVNILLT 758
>gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1863
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 412 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 591
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 592 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 750
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 734 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 555
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 554 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 411
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 736 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 831
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 830 GNCVLSPTYATAAKCITASKAFSVNILLT 744
>gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimerase (MUR4) mRNA, complete
cds
Length = 1579
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 114 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 293
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 294 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 452
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -1
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 436 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 257
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 256 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 113
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 438 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 533
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -1
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 532 GNCVLSPTYATAAKCITASKAFSVNILLT 446
>gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein (T5I8.7) mRNA, complete cds
Length = 1260
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 76 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 255
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 256 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 414
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 398 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 219
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 218 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 75
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 400 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 495
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 494 GNCVLSPTYATAAKCITASKAFSVNILLT 408
>gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1260
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 76 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 255
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 256 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 414
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 398 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 219
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 218 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 75
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 400 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 495
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 494 GNCVLSPTYATAAKCITASKAFSVNILLT 408
>emb|AX506245.1| Sequence 940 from Patent WO0216655
Length = 1239
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 55 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 234
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 235 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 393
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 377 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 198
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 197 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 54
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 379 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 474
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 473 GNCVLSPTYATAAKCITASKAFSVNILLT 387
>emb|AX651855.1| Sequence 721 from Patent WO03000898
Length = 1239
Score = 199 bits (429), Expect(2) = 5e-062
Identities = 83/113 (73%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 55 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 234
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
AALRLL++SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 235 AALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 393
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SPRSA +N SLPG GN C+ TA P DRLSTMVTR S +SL+AACEPI PAPPVTK
Sbjct: 377 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTRYDSFRSLRAACEPIYPAPPVTK 198
Query: 148 TWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
T VTPGS RENTL GDC + VR IFP F L S
Sbjct: 197 TCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFPK*LFFFLGS 54
Score = 60.6 bits (126), Expect(2) = 5e-062
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 379 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 474
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 473 GNCVLSPTYATAAKCITASKAFSVNILLT 387
>gb|AY133709.1| Arabidopsis thaliana clone C103301 putative UDP-glucose 4-epimerase
protein (At4g20460) mRNA, complete cds
Length = 1171
Score = 192 bits (414), Expect(2) = 6e-061
Identities = 81/104 (77%), Positives = 90/104 (86%)
Frame = +3 / +1
Query: 30 VGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQD 209
+GKII + LT LCIF LK +P F + FSR E GVTHVLVTGGAGYIGSHAALRLL+D
Sbjct: 1 MGKIILVVSLTALCIFMLKHAPSFTSPTAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKD 180
Query: 210 SYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
SYRVTIVDNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 181 SYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 312
Score = 126 bits (270), Expect(2) = 8e-029
Identities = 60/112 (53%), Positives = 69/112 (61%)
Frame = -1 / -3
Query: 367 NSFRSIDEDTDFWSPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKA 188
N+F T SP+SA +N SLPG GN PC+T TAP FP +RLSTMVTR S KSL A
Sbjct: 338 NAFSEKILSTALASPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSTMVTRYESFKSLNA 159
Query: 187 ACEPI*PAPPVTKTWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFP 32
AC+PI PAPPVT T VTP S REN + K G C + VR +I P
Sbjct: 158 ACDPIYPAPPVTNT*VTPSSLRENAVGDVKLGACLSIKMHKAVRETTKIILP 3
Score = 63.8 bits (133), Expect(2) = 6e-061
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A V+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 301 AKAVDKIFSENAFDAVMHFAAVAYVGESTLDP 396
Score = 22.1 bits (42), Expect(2) = 8e-029
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -1
Query: 511 CSLPHKXQLQSASQHQ 464
CSL H Q+A QHQ
Sbjct: 385 CSLQHMLLQQNA*QHQ 338
>ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/
catalytic AT4G20460 mRNA, complete cds
Length = 1171
Score = 192 bits (414), Expect(2) = 6e-061
Identities = 81/104 (77%), Positives = 90/104 (86%)
Frame = +3 / +1
Query: 30 VGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQD 209
+GKII + LT LCIF LK +P F + FSR E GVTHVLVTGGAGYIGSHAALRLL+D
Sbjct: 1 MGKIILVVSLTALCIFMLKHAPSFTSPTAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKD 180
Query: 210 SYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
SYRVTIVDNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 181 SYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 312
Score = 126 bits (270), Expect(2) = 8e-029
Identities = 60/112 (53%), Positives = 69/112 (61%)
Frame = -1 / -3
Query: 367 NSFRSIDEDTDFWSPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKA 188
N+F T SP+SA +N SLPG GN PC+T TAP FP +RLSTMVTR S KSL A
Sbjct: 338 NAFSEKILSTALASPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSTMVTRYESFKSLNA 159
Query: 187 ACEPI*PAPPVTKTWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFP 32
AC+PI PAPPVT T VTP S REN + K G C + VR +I P
Sbjct: 158 ACDPIYPAPPVTNT*VTPSSLRENAVGDVKLGACLSIKMHKAVRETTKIILP 3
Score = 63.8 bits (133), Expect(2) = 6e-061
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A V+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 301 AKAVDKIFSENAFDAVMHFAAVAYVGESTLDP 396
Score = 22.1 bits (42), Expect(2) = 8e-029
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -1
Query: 511 CSLPHKXQLQSASQHQ 464
CSL H Q+A QHQ
Sbjct: 385 CSLQHMLLQQNA*QHQ 338
>emb|AX506164.1| Sequence 859 from Patent WO0216655
Length = 1140
Score = 192 bits (414), Expect(2) = 6e-061
Identities = 81/104 (77%), Positives = 90/104 (86%)
Frame = +3 / +1
Query: 30 VGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQD 209
+GKII + LT LCIF LK +P F + FSR E GVTHVLVTGGAGYIGSHAALRLL+D
Sbjct: 1 MGKIILVVSLTALCIFMLKHAPSFTSPTAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKD 180
Query: 210 SYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
SYRVTIVDNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 181 SYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 312
Score = 126 bits (270), Expect(2) = 8e-029
Identities = 60/112 (53%), Positives = 69/112 (61%)
Frame = -1 / -2
Query: 367 NSFRSIDEDTDFWSPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKA 188
N+F T SP+SA +N SLPG GN PC+T TAP FP +RLSTMVTR S KSL A
Sbjct: 338 NAFSEKILSTALASPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSTMVTRYESFKSLNA 159
Query: 187 ACEPI*PAPPVTKTWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFP 32
AC+PI PAPPVT T VTP S REN + K G C + VR +I P
Sbjct: 158 ACDPIYPAPPVTNT*VTPSSLRENAVGDVKLGACLSIKMHKAVRETTKIILP 3
Score = 63.8 bits (133), Expect(2) = 6e-061
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A V+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 301 AKAVDKIFSENAFDAVMHFAAVAYVGESTLDP 396
Score = 22.1 bits (42), Expect(2) = 8e-029
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -3
Query: 511 CSLPHKXQLQSASQHQ 464
CSL H Q+A QHQ
Sbjct: 385 CSLQHMLLQQNA*QHQ 338
>emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS47ZB07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1831
Score = 113 bits (242), Expect(3) = 3e-055
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = +3 / +3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
D ++K +GKI+ LT LCIF LKQSP F SVFSRHEPGVTHVLVTGGAGYIGSH
Sbjct: 369 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSH 548
Query: 186 AALRLLQD 209
AALRLL++
Sbjct: 549 AALRLLKE 572
Score = 88.6 bits (187), Expect(3) = 3e-055
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = +3 / +1
Query: 210 SYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
SYRVTIVDNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 574 SYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 708
Score = 79.9 bits (168), Expect(3) = 2e-033
Identities = 38/69 (55%), Positives = 42/69 (60%)
Frame = -1 / -1
Query: 211 LSCKSLKAACEPI*PAPPVTKTWVTPGSWRENTLLPPKPGDCFRANIQSVVRTRAAMIFP 32
+S +SL+AACEPI PAPPVTKT VTPGS RENTL GDC + VR IFP
Sbjct: 574 ISFRSLRAACEPIYPAPPVTKTCVTPGSCRENTLGVLNVGDCLSMKMHKAVREAVKRIFP 395
Query: 31 TLRGFRLAS 5
F L S
Sbjct: 394 K*LFFFLGS 368
Score = 56.5 bits (117), Expect(3) = 2e-033
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR 215
SPRSA +N SLPG GN C+ TA P DRLSTMVTR
Sbjct: 692 SPRSA*IN*SLPGSGNSSCKILTAARLPRDRLSTMVTR 579
Score = 53.8 bits (111), Expect(3) = 3e-055
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAF+AVMHFAA YVGES P
Sbjct: 694 AKAVNKIFTENAFEAVMHFAAVEYVGESPQFP 789
Score = 46.0 bits (94), Expect(3) = 2e-033
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -3 / -3
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ LSPT + AAKCITAS AFS NILLT
Sbjct: 788 GNCGLSPTYSTAAKCITASKAFSVNILLT 702
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 88.6 bits (187), Expect(4) = 6e-053
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3 / +3
Query: 117 FSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
FSRHEPGVTHVLVTGGAGYIGSHAALRLL++SYRVTIV
Sbjct: 10864821 FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIV 10864934
Score = 73.5 bits (154), Expect(4) = 6e-053
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +3 / +2
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
DNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 10865027 DNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 10865140
Score = 68.0 bits (142), Expect(3) = 3e-023
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1 / -3
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S +SL+AACEPI PAPPVTKT VTPGS REN
Sbjct: 10864936 TTMVTRYDSFRSLRAACEPIYPAPPVTKTCVTPGSCREN 10864820
Score = 60.6 bits (126), Expect(4) = 6e-053
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +2
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 10865126 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 10865221
Score = 50.6 bits (104), Expect(3) = 3e-023
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -1
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 10865220 GNCVLSPTYATAAKCITASKAFSVNILLT 10865134
Score = 43.2 bits (88), Expect(4) = 6e-053
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSV 116
D ++K +GKI+ LT LCIF LKQSP F SV
Sbjct: 10864609 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSV 10864719
Score = 28.6 bits (56), Expect(3) = 3e-023
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3 / -3
Query: 335 FLVPQISKDEL*STRLRK*ALQNLYCSHISSR*II 231
F + +IS ++L +R RK* LQN CS I+ *I+
Sbjct: 10865131 FGISKISINKLKPSRFRK*FLQNPDCSEIAP**IV 10865027
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
Length = 96183
Score = 88.6 bits (187), Expect(4) = 6e-053
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3 / +2
Query: 117 FSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
FSRHEPGVTHVLVTGGAGYIGSHAALRLL++SYRVTIV
Sbjct: 31292 FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIV 31405
Score = 73.5 bits (154), Expect(4) = 6e-053
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +3 / +1
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
DNLSRGN+ AV++LQ LFP+PGRLQFI+ADLGD K+V+
Sbjct: 31498 DNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 31611
Score = 68.0 bits (142), Expect(4) = 9e-025
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1 / -1
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S +SL+AACEPI PAPPVTKT VTPGS REN
Sbjct: 31407 TTMVTRYDSFRSLRAACEPIYPAPPVTKTCVTPGSCREN 31291
Score = 60.6 bits (126), Expect(4) = 6e-053
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A VNKIF ENAFDAVMHFAA AYVGEST P
Sbjct: 31597 AKAVNKIFTENAFDAVMHFAAVAYVGESTQFP 31692
Score = 50.6 bits (104), Expect(4) = 9e-025
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT A AAKCITAS AFS NILLT
Sbjct: 31691 GNCVLSPTYATAAKCITASKAFSVNILLT 31605
Score = 43.2 bits (88), Expect(4) = 6e-053
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSV 116
D ++K +GKI+ LT LCIF LKQSP F SV
Sbjct: 31080 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSV 31190
Score = 28.6 bits (56), Expect(4) = 9e-025
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 335 FLVPQISKDEL*STRLRK*ALQNLYCSHISSR*II 231
F + +IS ++L +R RK* LQN CS I+ *I+
Sbjct: 31602 FGISKISINKLKPSRFRK*FLQNPDCSEIAP**IV 31498
Score = 22.6 bits (43), Expect(4) = 9e-025
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1 / -3
Query: 94 GDCFRANIQSVVRTRAAMIFPTLRGFRLAS 5
GDC + VR IFP F L S
Sbjct: 31168 GDCLSMKMHKAVREAVKRIFPK*LFFFLGS 31079
>ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN ROOT); NAD binding /
UDP-glucose 4-epimerase/ catalytic AT5G44480 (DUR) mRNA,
complete cds
Length = 1311
Score = 166 bits (357), Expect(2) = 5e-052
Identities = 73/112 (65%), Positives = 83/112 (74%)
Frame = +3 / +1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
+ + K GK++ L L I + QS F S FS+ E GVTHVLVTGGAGYIGSH
Sbjct: 148 EPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSH 327
Query: 186 AALRLLQDSYRVTIVDNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
AALRLL+DSYRVTIVDNLSRGN+GAVK LQ LFPQ GRLQFI+ADLGD +V
Sbjct: 328 AALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAV 483
Score = 110 bits (234), Expect(2) = 2e-030
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = -1 / -2
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR*LSCKSLKAACEPI*PAPPVTK 149
SP+SA MN SLP CGN C+ TAP FP +RLSTMVTR S +SLKAAC+PI*PAPPVT
Sbjct: 470 SPKSA*MN*SLPVCGNNCCKVLTAPRFPRERLSTMVTRYESLRSLKAACDPI*PAPPVTN 291
Query: 148 TWVTPGSWRENTL 110
T VTP S EN L
Sbjct: 290 T*VTPSSL*ENAL 252
Score = 60.2 bits (125), Expect(2) = 5e-052
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / +1
Query: 436 VNKIFAENAFDAVMHFAAXAYVGESTLEP 522
V KIF+ENAFDAVMHFAA AYVGESTL P
Sbjct: 481 VEKIFSENAFDAVMHFAAVAYVGESTLYP 567
Score = 44.1 bits (90), Expect(2) = 2e-030
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G VLSPT*A AAKCITAS AFS I T
Sbjct: 566 G*RVLSPT*ATAAKCITASKAFSEKIFST 480
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
sequence
Length = 108484
Score = 86.3 bits (182), Expect(4) = 5e-051
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3 / -3
Query: 117 FSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
FSR EPGVTHVLVTGGAGYIGSHAALRLL+DSYRVTIV
Sbjct: 35072 FSRSEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIV 34959
Score = 73.5 bits (154), Expect(4) = 5e-051
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3 / -1
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
DNLSRGN+GAVK+LQ LFP+PG+LQFI+ADLGD +V
Sbjct: 34870 DNLSRGNLGAVKILQQLFPEPGKLQFIYADLGDANAV 34760
Score = 62.0 bits (129), Expect(4) = 5e-051
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1 / -2
Query: 433 QVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
QVNKIF+ENAFDAVMHFAA AYVGEST P
Sbjct: 34671 QVNKIFSENAFDAVMHFAAVAYVGESTQFP 34582
Score = 62.0 bits (129), Expect(3) = 2e-030
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1 / +1
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S + KAAC+PI PAPPVT+T VTPGS REN
Sbjct: 34957 TTMVTRYESFRRRKAACDPIYPAPPVTRTCVTPGSLREN 35073
Score = 55.1 bits (114), Expect(3) = 2e-030
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -3 / +2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G+ VLSPT*A AAKCITASNAFS NILLT
Sbjct: 34583 GNCVLSPT*ATAAKCITASNAFSENILLT 34669
Score = 54.7 bits (113), Expect(3) = 2e-030
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -1 / +3
Query: 355 SIDEDTDFWSPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLS 230
++ + T F SPRSA MN S PG GN C+ TAP FP DRLS
Sbjct: 34746 TMKDHTAFASPRSA*MN*SFPGSGNSCCKILTAPRFPRDRLS 34871
Score = 37.7 bits (76), Expect(4) = 5e-051
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3 / -3
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSV 116
D ++ +GKI+ + LT +CI L QSP F SV
Sbjct: 35264 DPKKNNNYMGKIVLVMTLTAMCILLLNQSPTFNTPSV 35154
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 83.5 bits (176), Expect(3) = 1e-047
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / -1
Query: 111 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
S FSR E GVTHVLVTGGAGYIGSHAALRLL+DSYRVTIV
Sbjct: 6944119 SQFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIV 6944000
Score = 81.3 bits (171), Expect(3) = 1e-047
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3 / -1
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
DNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 6943900 DNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 6943790
Score = 65.2 bits (136), Expect(3) = 1e-047
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 415 FHLTASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
+ + QV+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 6943731 YEFCSFQVDKIFSENAFDAVMHFAAVAYVGESTLDP 6943624
Score = 61.6 bits (128), Expect(3) = 4e-029
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S KSL AAC+PI PAPPVT T VTP S REN
Sbjct: 6943998 TTMVTRYESFKSLNAACDPIYPAPPVTNT*VTPSSLREN 6944114
Score = 55.6 bits (115), Expect(3) = 4e-029
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -1 / +3
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTM 224
SP+SA +N SLPG GN PC+T TAP FP +RLS +
Sbjct: 6943803 SPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSCL 6943907
Score = 50.1 bits (103), Expect(3) = 4e-029
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -3 / +2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
GS VLSPT A AAKCITASNAFS IL T
Sbjct: 6943625 GSRVLSPTYATAAKCITASNAFSEKILST 6943711
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
Length = 197568
Score = 83.5 bits (176), Expect(3) = 1e-047
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / -2
Query: 111 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
S FSR E GVTHVLVTGGAGYIGSHAALRLL+DSYRVTIV
Sbjct: 35504 SQFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIV 35385
Score = 81.3 bits (171), Expect(3) = 1e-047
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3 / -2
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
DNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 35285 DNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 35175
Score = 65.2 bits (136), Expect(3) = 1e-047
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1 / -3
Query: 415 FHLTASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
+ + QV+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 35116 YEFCSFQVDKIFSENAFDAVMHFAAVAYVGESTLDP 35009
Score = 61.6 bits (128), Expect(3) = 5e-029
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1 / +1
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S KSL AAC+PI PAPPVT T VTP S REN
Sbjct: 35383 TTMVTRYESFKSLNAACDPIYPAPPVTNT*VTPSSLREN 35499
Score = 55.6 bits (115), Expect(3) = 5e-029
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -1 / +1
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTM 224
SP+SA +N SLPG GN PC+T TAP FP +RLS +
Sbjct: 35188 SPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSCL 35292
Score = 50.1 bits (103), Expect(3) = 5e-029
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
GS VLSPT A AAKCITASNAFS IL T
Sbjct: 35010 GSRVLSPTYATAAKCITASNAFSEKILST 35096
>emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BAC clone F9F13 (ESSA project)
Length = 109936
Score = 83.5 bits (176), Expect(3) = 1e-047
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3 / -1
Query: 111 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
S FSR E GVTHVLVTGGAGYIGSHAALRLL+DSYRVTIV
Sbjct: 49957 SQFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIV 49838
Score = 81.3 bits (171), Expect(3) = 1e-047
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3 / -1
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSV 341
DNLSRGN+GAVKVLQGLFP+PGRLQFI+ADLGD K+V
Sbjct: 49738 DNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAV 49628
Score = 65.2 bits (136), Expect(3) = 1e-047
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 415 FHLTASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
+ + QV+KIF+ENAFDAVMHFAA AYVGESTL+P
Sbjct: 49569 YEFCSFQVDKIFSENAFDAVMHFAAVAYVGESTLDP 49462
Score = 61.6 bits (128), Expect(3) = 5e-029
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1 / +3
Query: 232 STMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
+TMVTR S KSL AAC+PI PAPPVT T VTP S REN
Sbjct: 49836 TTMVTRYESFKSLNAACDPIYPAPPVTNT*VTPSSLREN 49952
Score = 55.6 bits (115), Expect(3) = 5e-029
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -1 / +3
Query: 328 SPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTM 224
SP+SA +N SLPG GN PC+T TAP FP +RLS +
Sbjct: 49641 SPKSA*IN*SLPGSGNNPCKTLTAPRFPRERLSCL 49745
Score = 50.1 bits (103), Expect(3) = 5e-029
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -3 / +2
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
GS VLSPT A AAKCITASNAFS IL T
Sbjct: 49463 GSRVLSPTYATAAKCITASNAFSEKILST 49549
>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16
Length = 61290
Score = 81.3 bits (171), Expect(3) = 2e-043
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +3 / +3
Query: 117 FSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
FS+ E GVTHVLVTGGAGYIGSHAALRLL+DSYRVTIV
Sbjct: 35310 FSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIV 35423
Score = 72.1 bits (151), Expect(3) = 2e-043
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +3 / +2
Query: 231 DNLSRGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
DNLSRGN+GAVK LQ LFPQ GRLQFI+ADLGD +VS
Sbjct: 35504 DNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVS 35617
Score = 62.5 bits (130), Expect(3) = 2e-043
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1 / +2
Query: 433 QVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
QV KIF+ENAFDAVMHFAA AYVGESTL P
Sbjct: 35702 QVEKIFSENAFDAVMHFAAVAYVGESTLYP 35791
Score = 61.6 bits (128), Expect(3) = 9e-027
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 235 LSTMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWREN 116
++TMVTR S +SLKAAC+PI*PAPPVT T VTP S EN
Sbjct: 35428 VTTMVTRYESLRSLKAACDPI*PAPPVTNT*VTPSSL*EN 35309
Score = 53.8 bits (111), Expect(3) = 9e-027
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 346 EDTDFWSPRSAKMNCSLPGCGNKPCRTFTAPIFPLDRLSTMVTR 215
+DT SP+SA MN SLP CGN C+ TAP FP +RLS T+
Sbjct: 35619 KDTAKGSPKSA*MN*SLPVCGNNCCKVLTAPRFPRERLSCCDTK 35488
Score = 44.1 bits (90), Expect(3) = 9e-027
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3 / -1
Query: 521 GSNVLSPT*AXAAKCITASNAFSANILLT 435
G VLSPT*A AAKCITAS AFS I T
Sbjct: 35790 G*RVLSPT*ATAAKCITASKAFSEKIFST 35704
>gb|CC795106.1|CC795106 SALK_069746.55.40.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_069746.55.40.x,
DNA sequence
Length = 479
Score = 88.6 bits (187), Expect(2) = 9e-024
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3 / -3
Query: 117 FSRHEPGVTHVLVTGGAGYIGSHAALRLLQDSYRVTIV 230
FSRHEPGVTHVLVTGGAGYIGSHAALRLL++SYRVTIV
Sbjct: 171 FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIV 58
Score = 43.2 bits (88), Expect(2) = 9e-024
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3 / -1
Query: 6 DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSV 116
D ++K +GKI+ LT LCIF LKQSP F SV
Sbjct: 383 DPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSV 273
>gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA, complete cds
Length = 1125
Score = 64.8 bits (135), Expect(2) = 4e-022
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3 / +1
Query: 243 RGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
RGN+GAVK+LQ LFP+PG+LQFI+ADLGD +V+
Sbjct: 22 RGNLGAVKILQQLFPEPGKLQFIYADLGDANAVN 123
Score = 61.6 bits (128), Expect(2) = 4e-022
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1 / +1
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A+ VNKIF+ENAFDAVMHFAA AYVGEST P
Sbjct: 109 ANAVNKIFSENAFDAVMHFAAVAYVGESTQFP 204
>ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalytic AT2G34850 mRNA,
complete cds
Length = 1106
Score = 64.8 bits (135), Expect(2) = 4e-022
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3 / +3
Query: 243 RGNMGAVKVLQGLFPQPGRLQFIFADLGDQKSVS 344
RGN+GAVK+LQ LFP+PG+LQFI+ADLGD +V+
Sbjct: 3 RGNLGAVKILQQLFPEPGKLQFIYADLGDANAVN 104
Score = 61.6 bits (128), Expect(2) = 4e-022
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1 / +3
Query: 427 ASQVNKIFAENAFDAVMHFAAXAYVGESTLEP 522
A+ VNKIF+ENAFDAVMHFAA AYVGEST P
Sbjct: 90 ANAVNKIFSENAFDAVMHFAAVAYVGESTQFP 185
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,126,202,947
Number of Sequences: 1013581
Number of extensions: 16331782
Number of successful extensions: 251302
Number of sequences better than 1.0e-020: 27
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 29173533530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)