TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCF2e06.yg.2.1
(319 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY034958.1| Arabidopsis thaliana putative sucrose syntha... 176 1e-043
ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransfera... 176 1e-043
gb|CB260037.1|CB260037 04-E011178-013-009-H01-T7R MPIZ-ADIS... 174 1e-042
gb|AY099712.1| Arabidopsis thaliana sucrose-UDP glucosyltra... 174 1e-042
emb|AX506925.1| Sequence 1620 from Patent WO0216655 174 1e-042
emb|AX651931.1| Sequence 808 from Patent WO03000898 174 1e-042
ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHAS... 174 1e-042
ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNT... 174 1e-042
gb|CB254324.1|CB254324 72-E018427-019-008-O17-T7R MPIZ-ADIS... 172 3e-042
gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, ... 170 1e-041
gb|AY051001.1| Arabidopsis thaliana putative sucrose synthe... 170 1e-041
gb|AY142511.1| Arabidopsis thaliana putative sucrose synthe... 170 1e-041
emb|AX507720.1| Sequence 2415 from Patent WO0216655 170 1e-041
emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cD... 170 1e-041
ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransfera... 170 1e-041
gb|CD534456.1|CD534456 39G7 Arabidopsis Leaf Senescence Lib... 160 1e-038
ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHAS... 158 5e-038
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 123 2e-037
emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome... 123 2e-037
gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3 123 2e-037
emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome ... 77 2e-036
gb|AC074227.1|AC074227 Arabidopsis thaliana chromosome III ... 77 2e-036
gb|BE522048.1|BE522048 M23C8STM Arabidopsis developing seed... 150 1e-035
gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 73 2e-034
ref|NM_123077.2| Arabidopsis thaliana UDP-glycosyltransfera... 145 3e-034
emb|X70990.1|ATSUS1 A.thaliana gene for sucrose synthase 72 5e-034
ref|NM_105997.1| Arabidopsis thaliana UDP-glycosyltransfera... 137 1e-031
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 123 1e-027
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 93 5e-027
gb|AC012396.7|AC012396 Arabidopsis thaliana chromosome 1 BA... 93 5e-027
dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosom... 63 3e-025
gb|CB256112.1|CB256112 01-E012742-027-007-A02-T7R MPIZ-ADIS... 68 1e-023
emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene 63 8e-021
>gb|AY034958.1| Arabidopsis thaliana putative sucrose synthase (At3g43190) mRNA,
complete cds
Length = 1798
Score = 176 bits (381), Expect = 1e-043
Identities = 71/101 (70%), Positives = 83/101 (82%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+++ DI+R PFR E GI+R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 289 GSQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSD 468
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GNLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 469 GNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEK 591
Score = 101 bits (216), Expect = 6e-021
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = -3 / -3
Query: 293 MSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXETXXXXX 114
+SE GYLVFSKA*AMVH*VTP+LCA++ ATRLPSL* PMI+SG SF I T
Sbjct: 566 ISESGYLVFSKA*AMVH*VTPSLCANKDATRLPSL*FPMIKSGFPCNSFEISAATSSVKV 387
Query: 113 XXXXXXSXXEIXXRRMPFSFLKGXRMMS 30
S +I R +PFS LKG R +S
Sbjct: 386 SRYGQTSNLDIHLRTIPFSVLKGTRRIS 303
>ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT3G43190 mRNA,
complete cds
Length = 2717
Score = 176 bits (381), Expect = 1e-043
Identities = 71/101 (70%), Positives = 83/101 (82%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+++ DI+R PFR E GI+R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 1225 GSQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSD 1404
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GNLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1405 GNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEK 1527
Score = 101 bits (216), Expect = 6e-021
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 293 MSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXETXXXXX 114
+SE GYLVFSKA*AMVH*VTP+LCA++ ATRLPSL* PMI+SG SF I T
Sbjct: 1502 ISESGYLVFSKA*AMVH*VTPSLCANKDATRLPSL*FPMIKSGFPCNSFEISAATSSVKV 1323
Query: 113 XXXXXXSXXEIXXRRMPFSFLKGXRMMS 30
S +I R +PFS LKG R +S
Sbjct: 1322 SRYGQTSNLDIHLRTIPFSVLKGTRRIS 1239
>gb|CB260037.1|CB260037 04-E011178-013-009-H01-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770H019Q 5-PRIME, mRNA sequence
Length = 456
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 40 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 219
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 220 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 339
>gb|AY099712.1| Arabidopsis thaliana sucrose-UDP glucosyltransferase (At5g20830)
mRNA, complete cds
Length = 1942
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 1162 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 1341
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1342 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 1461
>emb|AX506925.1| Sequence 1620 from Patent WO0216655
Length = 2427
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 1075 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 1254
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1255 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 1374
>emb|AX651931.1| Sequence 808 from Patent WO03000898
Length = 2427
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 1075 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 1254
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1255 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 1374
>ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.1 mRNA, complete cds
Length = 2887
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 1162 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 1341
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1342 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 1461
>ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.2 mRNA, complete cds
Length = 2879
Score = 174 bits (375), Expect = 1e-042
Identities = 70/100 (70%), Positives = 81/100 (81%)
Frame = +1 / +2
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 1154 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG 1333
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
NLVA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 1334 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDK 1453
>gb|CB254324.1|CB254324 72-E018427-019-008-O17-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O178Q 5-PRIME, mRNA sequence
Length = 564
Score = 172 bits (372), Expect = 3e-042
Identities = 70/98 (71%), Positives = 80/98 (81%)
Frame = +1 / +2
Query: 25 HTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNL 204
+ DI+R PFR E GI+R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSDGNL
Sbjct: 2 YCDILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNL 181
Query: 205 VATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
VA+LLAHKLGVTQCTIAHALEKTKYP+SDIY K D +
Sbjct: 182 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEK 295
Score = 101 bits (216), Expect = 6e-021
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 293 MSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXETXXXXX 114
+SE GYLVFSKA*AMVH*VTP+LCA++ ATRLPSL* PMI+SG SF I T
Sbjct: 270 ISESGYLVFSKA*AMVH*VTPSLCANKDATRLPSL*FPMIKSGFPCNSFEISAATSSVKV 91
Query: 113 XXXXXXSXXEIXXRRMPFSFLKGXRMMS 30
S +I R +PFS LKG R +S
Sbjct: 90 SRYGQTSNLDIHLRTIPFSVLKGTRRIS 7
>gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, complete cds
Length = 2898
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +3
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1308 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1487
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1488 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1613
>gb|AY051001.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2904
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +2
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1283 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1462
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1463 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1588
>gb|AY142511.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2506
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +1
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1069 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1248
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1249 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1374
>emb|AX507720.1| Sequence 2415 from Patent WO0216655
Length = 2430
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +1
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1069 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1248
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1249 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1374
>emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZE09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2686
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +2
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1130 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1309
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1310 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1435
>ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT4G02280 mRNA,
complete cds
Length = 2913
Score = 170 bits (367), Expect = 1e-041
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +1 / +3
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 1308 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 1487
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
DGNLVA+L+AH++GVTQCTIAHALEKTKYP+SDIY FD++
Sbjct: 1488 DGNLVASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNK 1613
>gb|CD534456.1|CD534456 39G7 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 383
Score = 160 bits (345), Expect = 1e-038
Identities = 64/89 (71%), Positives = 74/89 (83%)
Frame = +1 / +1
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDG 198
+E+ DI+R PFR E GI+R IS + WPYLETYTED + + KE+ KPDLIIGNYSDG
Sbjct: 115 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELDGKPDLIIGNYSDG 294
Query: 199 NLVATLLAHKLGVTQCTIAHALEKTKYPN 285
NLVA+LLAHKLGVTQCTIAHALEKTKYP+
Sbjct: 295 NLVASLLAHKLGVTQCTIAHALEKTKYPD 381
>ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHASE 2);
UDP-glycosyltransferase/ sucrose synthase/ transferase,
transferring glycosyl groups AT5G49190 (SUS2) mRNA,
complete cds
Length = 2511
Score = 158 bits (341), Expect = 5e-038
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +1 / +1
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEH I+R PFR E GILR IS D WPYLET+ ED S I E+ P+LIIGNYS
Sbjct: 1060 SGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYS 1239
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIY 297
DGNLVA+LLA KLGV QC IAHALEKTKYP SDIY
Sbjct: 1240 DGNLVASLLASKLGVIQCNIAHALEKTKYPESDIY 1344
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 123 bits (265), Expect(2) = 2e-037
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1 / +3
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 995460 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 995639
Query: 193 DGNLVATLLAHKLGVTQCTIA 255
DGNLVA+L+AH++GVTQ ++
Sbjct: 995640 DGNLVASLMAHRMGVTQVRVS 995702
Score = 52.7 bits (109), Expect(2) = 2e-037
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1 / +3
Query: 241 QCTIAHALEKTKYPNSDIYLDKFDSQ 318
QCTIAHALEKTKYP+SDIY FD++
Sbjct: 995781 QCTIAHALEKTKYPDSDIYWKDFDNK 995858
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
Length = 194892
Score = 123 bits (265), Expect(2) = 2e-037
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1 / +2
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 32300 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 32479
Query: 193 DGNLVATLLAHKLGVTQCTIA 255
DGNLVA+L+AH++GVTQ ++
Sbjct: 32480 DGNLVASLMAHRMGVTQVRVS 32542
Score = 52.7 bits (109), Expect(2) = 2e-037
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1 / +2
Query: 241 QCTIAHALEKTKYPNSDIYLDKFDSQ 318
QCTIAHALEKTKYP+SDIY FD++
Sbjct: 32621 QCTIAHALEKTKYPDSDIYWKDFDNK 32698
>gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3
Length = 48689
Score = 123 bits (265), Expect(2) = 2e-037
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1 / -2
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 19978 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 19799
Query: 193 DGNLVATLLAHKLGVTQCTIA 255
DGNLVA+L+AH++GVTQ ++
Sbjct: 19798 DGNLVASLMAHRMGVTQVRVS 19736
Score = 52.7 bits (109), Expect(2) = 2e-037
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1 / -2
Query: 241 QCTIAHALEKTKYPNSDIYLDKFDSQ 318
QCTIAHALEKTKYP+SDIY FD++
Sbjct: 19657 QCTIAHALEKTKYPDSDIYWKDFDNK 19580
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15
Length = 110800
Score = 77.3 bits (163), Expect(3) = 2e-036
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +1 / -2
Query: 118 YTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQ 243
+++DV+ I KE+ KPDLIIGNYSDGNLVA+LLAHKLGVTQ
Sbjct: 16539 FSQDVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQ 16414
Score = 58.2 bits (121), Expect(3) = 2e-036
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
G+++ DI+R PFR E GI+R IS + WPYLET+TE
Sbjct: 16732 GSQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTE 16622
Score = 55.9 bits (116), Expect(3) = 2e-036
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 235 VTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
+TQCTIAHALEKTKYP+SDIY K D +
Sbjct: 16336 ITQCTIAHALEKTKYPDSDIYWKKLDEK 16253
>gb|AC074227.1|AC074227 Arabidopsis thaliana chromosome III clone TAMU-T15O15, *** SEQUENCING
IN PROGRESS ***, 3 unordered pieces
Length = 80970
Score = 77.3 bits (163), Expect(3) = 2e-036
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +1 / +1
Query: 118 YTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQ 243
+++DV+ I KE+ KPDLIIGNYSDGNLVA+LLAHKLGVTQ
Sbjct: 9709 FSQDVAAEISKELQGKPDLIIGNYSDGNLVASLLAHKLGVTQ 9834
Score = 58.2 bits (121), Expect(3) = 2e-036
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
G+++ DI+R PFR E GI+R IS + WPYLET+TE
Sbjct: 9516 GSQYCDILRVPFRTEKGIVRKWISRFEVWPYLETFTE 9626
Score = 55.9 bits (116), Expect(3) = 2e-036
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1 / +3
Query: 235 VTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
+TQCTIAHALEKTKYP+SDIY K D +
Sbjct: 9912 ITQCTIAHALEKTKYPDSDIYWKKLDEK 9995
>gb|BE522048.1|BE522048 M23C8STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M23C8 5', mRNA sequence
Length = 395
Score = 150 bits (323), Expect = 1e-035
Identities = 63/95 (66%), Positives = 70/95 (73%)
Frame = +1 / +3
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEH I+R PFR E GILR IS D WPYLET+ ED S I E+ P+LIIGNYS
Sbjct: 108 SGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYS 287
Query: 193 DGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIY 297
DGNLVA+LLA KLGV QC IAHAL+ TK P SDIY
Sbjct: 288 DGNLVASLLASKLGVIQCNIAHALKXTKLPESDIY 392
>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15
Length = 89490
Score = 73.2 bits (154), Expect(3) = 2e-034
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +1 / -2
Query: 124 EDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHAL 264
+D + + KE+ KPDLIIGNYSDGNLVA+LLAHKLGVTQ + L
Sbjct: 85253 QDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQVWLLETL 85113
Score = 58.6 bits (122), Expect(3) = 2e-034
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1 / -2
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
+E+ DI+R PFR E GI+R IS + WPYLETYTE
Sbjct: 85439 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE 85332
Score = 52.2 bits (108), Expect(3) = 2e-034
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1 / -1
Query: 241 QCTIAHALEKTKYPNSDIYLDKFDSQ 318
QCTIAHALEKTKYP+SDIY K D +
Sbjct: 85047 QCTIAHALEKTKYPDSDIYWKKLDDK 84970
>ref|NM_123077.2| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase
AT5G37180 mRNA, complete cds
Length = 2511
Score = 145 bits (313), Expect = 3e-034
Identities = 59/99 (59%), Positives = 78/99 (78%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
GT++++I+R PF ENGILR +S D +PYLE +T+D + I+ + KPDLIIGNY+D
Sbjct: 1051 GTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTKDATTKILDILEGKPDLIIGNYTD 1230
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFD 312
GNLVA+L+A+KLG+TQ TIAHALEKTKY +SDI +FD
Sbjct: 1231 GNLVASLMANKLGITQATIAHALEKTKYEDSDIKWKEFD 1347
>emb|X70990.1|ATSUS1 A.thaliana gene for sucrose synthase
Length = 5007
Score = 72.3 bits (152), Expect(3) = 5e-034
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1 / +2
Query: 124 EDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQ 243
+D + + KE+ KPDLIIGNYSDGNLVA+LLAHKLGVTQ
Sbjct: 3251 QDAAVELSKELDGKPDLIIGNYSDGNLVASLLAHKLGVTQ 3370
Score = 58.6 bits (122), Expect(3) = 5e-034
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
+E+ DI+R PFR E GI+R IS + WPYLETYTE
Sbjct: 3063 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE 3170
Score = 52.2 bits (108), Expect(3) = 5e-034
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 241 QCTIAHALEKTKYPNSDIYLDKFDSQ 318
QCTIAHALEKTKYP+SDIY K D +
Sbjct: 3454 QCTIAHALEKTKYPDSDIYWKKLDDK 3531
>ref|NM_105997.1| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase
AT1G73370 mRNA, complete cds
Length = 2883
Score = 137 bits (295), Expect = 1e-031
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
GT+H+ I+R PF G+LR +S D +PYLE +T+D + I++ + KPDLIIGNY+D
Sbjct: 1084 GTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTD 1263
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFD 312
GNLVA+L+A KLGVTQ TIAHALEKTKY +SD + D
Sbjct: 1264 GNLVASLMATKLGVTQGTIAHALEKTKYEDSDAKWKELD 1380
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 123 bits (265), Expect = 1e-027
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1 / +2
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYS 192
+GTEHT I+R PFR+E GILR IS D WPYLE Y +D + I+ E+ PD IIGNYS
Sbjct: 996650 SGTEHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYS 996829
Query: 193 DGNLVATLLAHKLGVTQCTIA 255
DGNLVA+L+AH++GVTQ ++
Sbjct: 996830 DGNLVASLMAHRMGVTQVRVS 996892
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 93.3 bits (198), Expect(2) = 5e-027
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +1 / -2
Query: 124 EDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLD 303
+D + I++ + KPDLIIGNY+DGNLVA+L+A KLGVTQ TIAHALEKTKY +SD
Sbjct: 11827813 QDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTKYEDSDAKWK 11827634
Query: 304 KFD 312
+ D
Sbjct: 11827633 ELD 11827625
Score = 48.1 bits (99), Expect(2) = 5e-027
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1 / -2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
GT+H+ I+R PF G+LR +S D +PYLE +T+
Sbjct: 11828014 GTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQ 11827904
>gb|AC012396.7|AC012396 Arabidopsis thaliana chromosome 1 BAC T9L24 genomic sequence, complete
sequence
Length = 90459
Score = 93.3 bits (198), Expect(2) = 5e-027
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +1 / +1
Query: 124 EDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLD 303
+D + I++ + KPDLIIGNY+DGNLVA+L+A KLGVTQ TIAHALEKTKY +SD
Sbjct: 66481 QDATSKILQRLDCKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTKYEDSDAKWK 66660
Query: 304 KFD 312
+ D
Sbjct: 66661 ELD 66669
Score = 48.1 bits (99), Expect(2) = 5e-027
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
GT+H+ I+R PF G+LR +S D +PYLE +T+
Sbjct: 66280 GTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQ 66390
>dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJG14
Length = 86121
Score = 63.2 bits (132), Expect(3) = 3e-025
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +1 / +2
Query: 109 LETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQ 243
++ Y D + I+ + KPDLIIGNY+DGNLVA+L+A+KLG+TQ
Sbjct: 82784 IKYYE*DATTKILDILEGKPDLIIGNYTDGNLVASLMANKLGITQ 82918
Score = 51.3 bits (106), Expect(3) = 3e-025
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
GT++++I+R PF ENGILR +S D +PYLE +T+
Sbjct: 82586 GTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTK 82696
Score = 38.5 bits (78), Expect(3) = 3e-025
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 247 TIAHALEKTKYPNSDIYLDKFD 312
TIAHALEKTKY +SDI +FD
Sbjct: 83016 TIAHALEKTKYEDSDIKWKEFD 83081
>gb|CB256112.1|CB256112 01-E012742-027-007-A02-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772A027Q 5-PRIME, mRNA sequence
Length = 684
Score = 68.2 bits (143), Expect(2) = 1e-023
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 142 IMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHAL 264
+ KE+ KPDLIIGNYSDG + +KLGVTQCTIAHAL
Sbjct: 562 LSKELNGKPDLIIGNYSDGKSCCFFIGYKLGVTQCTIAHAL 684
Score = 61.3 bits (128), Expect(2) = 1e-023
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 19 TEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTED 129
+E+ DI+R PFR E GI+R IS + WPYLETYTED
Sbjct: 438 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTED 548
>emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene
Length = 4441
Score = 62.7 bits (131), Expect(2) = 8e-021
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 13 AGTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTE 126
+GTEH I+R PFR E GILR IS D WPYLET+ E
Sbjct: 2319 SGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAE 2432
Score = 60.9 bits (127), Expect(2) = 8e-021
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = +1 / +1
Query: 127 DVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKY 279
D S I E+ P+LIIGNYSDGNLVA+LLA KLGV Q +AL K+
Sbjct: 2629 DASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQVDGFYALCNIKF 2781
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.317 0.135 0.399
Matrix: BLOSUM62
Number of Hits to DB: 586,607,578
Number of Sequences: 1013581
Number of extensions: 6660308
Number of successful extensions: 230311
Number of sequences better than 1.0e-020: 38
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 12961545844
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)