TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBN21e06.xg.2.1
(704 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY060556.1| Arabidopsis thaliana At1g52150/F5F19_21 mRNA... 240 4e-062
emb|AX505646.1| Sequence 341 from Patent WO0216655 240 4e-062
emb|AJ439449.1|ATH439449 Arabidopsis thaliana mRNA for home... 240 4e-062
ref|NM_104096.2| Arabidopsis thaliana ATHB-15 (INCURVATA 4)... 240 4e-062
ref|NM_179464.1| Arabidopsis thaliana ATHB-15 (INCURVATA 4)... 240 4e-062
ref|NM_125462.2| Arabidopsis thaliana REV (REVOLUTA); DNA b... 176 6e-059
gb|AF188994.1| Arabidopsis thaliana homeodomain-leucine zip... 176 6e-059
emb|CQ879860.1| Sequence 7 from Patent WO2004063379 176 6e-059
gb|AF233592.1|AF233592 Arabidopsis thaliana REVOLUTA mRNA, ... 176 6e-059
emb|CQ804028.1| Sequence 439 from Patent WO2004035798 176 2e-058
emb|BX830562.1|CNS09YQ2 Arabidopsis thaliana Full-length cD... 176 3e-058
gb|DR751613.1|DR751613 44-L022148-065-007-D06-SeLB MPIZ-ADI... 154 2e-057
gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F... 95 2e-052
emb|Y11122.1|ATHB14 A.thaliana ATHB-14 gene 95 3e-052
emb|BX815318.1|CNS0AATA Arabidopsis thaliana Full-length cD... 158 5e-052
ref|NM_102785.3| Arabidopsis thaliana PHV (PHAVOLUTA); DNA ... 158 5e-052
emb|AX506311.1| Sequence 1006 from Patent WO0216655 158 5e-052
emb|AJ440967.1|ATH440967 Arabidopsis thaliana mRNA for home... 158 5e-052
gb|DR751584.1|DR751584 60-L022148-065-007-D08-SeLB MPIZ-ADI... 157 7e-052
gb|BX835677.1|BX835677 BX835677 Arabidopsis thaliana Adult ... 155 3e-051
gb|AY099791.1| Arabidopsis thaliana homeodomain transcripti... 177 9e-051
ref|NM_129025.2| Arabidopsis thaliana PHB (PHABULOSA); DNA ... 177 9e-051
gb|BT000335.1| Arabidopsis thaliana homeodomain transcripti... 177 9e-051
emb|AX507862.1| Sequence 2557 from Patent WO0216655 177 9e-051
emb|AJ441291.1|ATH441291 Arabidopsis thaliana mRNA for home... 177 9e-051
gb|BX836701.1|BX836701 BX836701 Arabidopsis thaliana Flower... 177 9e-051
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 91 1e-050
gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F... 91 1e-050
gb|AY902309.1| Arabidopsis thaliana CORONA (CNA) gene, comp... 91 1e-050
dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosom... 80 2e-048
gb|AY170127.1| Arabidopsis thaliana homeodomain-leucine zip... 80 2e-048
emb|BX818192.1|CNS0AEBW Arabidopsis thaliana Full-length cD... 146 4e-047
emb|BX816452.1|CNS0AD1U Arabidopsis thaliana Full-length cD... 140 1e-046
gb|CF773335.1|CF773335 AG_FSL_15G09 Arabidopsis ag-1 35S:AG... 155 2e-044
ref|NM_119441.3| Arabidopsis thaliana ATHB-8 (HOMEOBOX GENE... 97 3e-044
gb|AY099631.1| Arabidopsis thaliana HD-zip transcription fa... 97 3e-044
emb|AX505386.1| Sequence 81 from Patent WO0216655 97 3e-044
gb|BT008798.1| Arabidopsis thaliana At4g32880 gene, complet... 97 3e-044
emb|AJ441292.1|ATH441292 Arabidopsis thaliana mRNA for home... 97 3e-044
gb|AV535435.1|AV535435 AV535435 Arabidopsis thaliana flower... 97 3e-044
gb|AV803829.1|AV803829 AV803829 RAFL9 Arabidopsis thaliana ... 180 4e-044
gb|DR751598.1|DR751598 52-L022148-065-007-D07-SeLB MPIZ-ADI... 96 6e-044
gb|DR751573.1|DR751573 68-L022148-065-007-D09-SeLB MPIZ-ADI... 96 6e-044
dbj|AK221046.1| Arabidopsis thaliana mRNA for HD-Zip protei... 158 6e-044
gb|AI998244.1|AI998244 701544894 A. thaliana, Columbia Col-... 143 2e-039
gb|AV531880.1|AV531880 AV531880 Arabidopsis thaliana flower... 140 1e-038
gb|AV523113.1|AV523113 AV523113 Arabidopsis thaliana aboveg... 160 4e-038
gb|CW843912.1|CW843912 GT10271.Ds3.09.29.2002.jw63.524 Arab... 87 2e-037
emb|BX813689.1|CNS0ADQZ Arabidopsis thaliana Full-length cD... 156 5e-037
gb|BP613588.1|BP613588 BP613588 RAFL16 Arabidopsis thaliana... 97 1e-036
gb|AV547587.1|AV547587 AV547587 Arabidopsis thaliana roots ... 131 7e-036
gb|T88239.1|T88239 11935 Lambda-PRL2 Arabidopsis thaliana c... 152 1e-035
gb|BX836111.1|BX836111 BX836111 Arabidopsis thaliana Hormon... 151 2e-035
gb|AV546728.1|AV546728 AV546728 Arabidopsis thaliana roots ... 129 3e-035
emb|Z50851.1|ATHB8GN A.thaliana athb-8 gene 78 4e-035
gb|AV548912.1|AV548912 AV548912 Arabidopsis thaliana roots ... 145 1e-033
gb|AV546349.1|AV546349 AV546349 Arabidopsis thaliana roots ... 144 2e-033
gb|AV556191.1|AV556191 AV556191 Arabidopsis thaliana green ... 142 1e-032
emb|AL049915.1|T16I18 Arabidopsis thaliana clone T16I18, **... 78 3e-032
gb|AV816036.1|AV816036 AV816036 RAFL9 Arabidopsis thaliana ... 139 7e-032
emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosom... 78 1e-030
gb|AI999508.1|AI999508 701556212 A. thaliana, Columbia Col-... 97 2e-030
gb|BP827375.1|BP827375 BP827375 RAFL19 Arabidopsis thaliana... 92 6e-030
gb|BP611955.1|BP611955 BP611955 RAFL16 Arabidopsis thaliana... 95 3e-029
gb|BP592955.1|BP592955 BP592955 RAFL15 Arabidopsis thaliana... 129 7e-029
gb|BP794843.1|BP794843 BP794843 RAFL7 Arabidopsis thaliana ... 129 1e-028
gb|AV556888.1|AV556888 AV556888 Arabidopsis thaliana green ... 107 1e-028
gb|BP608671.1|BP608671 BP608671 RAFL16 Arabidopsis thaliana... 128 1e-028
gb|AV522953.1|AV522953 AV522953 Arabidopsis thaliana aboveg... 74 7e-028
gb|AV810645.1|AV810645 AV810645 RAFL9 Arabidopsis thaliana ... 97 9e-028
gb|AV803476.1|AV803476 AV803476 RAFL9 Arabidopsis thaliana ... 125 1e-027
gb|BP615376.1|BP615376 BP615376 RAFL16 Arabidopsis thaliana... 97 5e-027
gb|BP606389.1|BP606389 BP606389 RAFL16 Arabidopsis thaliana... 122 2e-026
gb|AU229970.1|AU229970 AU229970 RAFL19 Arabidopsis thaliana... 103 2e-026
gb|BP604021.1|BP604021 BP604021 RAFL16 Arabidopsis thaliana... 121 3e-026
emb|Y10922.1|ATHB9 A.thaliana ATHB-9 gene 86 7e-026
gb|AV792007.1|AV792007 AV792007 RAFL7 Arabidopsis thaliana ... 118 1e-025
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 78 3e-025
gb|AI099605.1|AI099605 34331 Lambda-PRL2 Arabidopsis thalia... 115 1e-024
gb|BP820882.1|BP820882 BP820882 RAFL19 Arabidopsis thaliana... 66 1e-024
gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC ... 86 1e-023
gb|AV547109.1|AV547109 AV547109 Arabidopsis thaliana roots ... 112 1e-023
gb|BP652280.1|BP652280 BP652280 RAFL19 Arabidopsis thaliana... 101 3e-023
gb|AV814701.1|AV814701 AV814701 RAFL9 Arabidopsis thaliana ... 107 3e-022
gb|BP606103.1|BP606103 BP606103 RAFL16 Arabidopsis thaliana... 107 3e-022
gb|BP792506.1|BP792506 BP792506 RAFL7 Arabidopsis thaliana ... 106 8e-022
gb|BP778123.1|BP778123 BP778123 RAFL7 Arabidopsis thaliana ... 98 1e-021
gb|AA394727.1|AA394727 26510 Lambda-PRL2 Arabidopsis thalia... 91 5e-021
>gb|AY060556.1| Arabidopsis thaliana At1g52150/F5F19_21 mRNA, complete cds
Length = 3415
Score = 240 bits (518), Expect = 4e-062
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 2776 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 2955
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+A L G+CLS MGR V
Sbjct: 2956 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPV 3135
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 3136 SYERAVAWKVLNEEENAHCICFVFINWSFV* 3228
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQL K Q SS TFQATA S ET P+ +RH P R+A PC + G S
Sbjct: 3224 TKDQLMNTKQMQ*AFSSSLSTFQATALSYETGLPMLERHIPP*RHAKPCCMICGNSEQRV 3045
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
FLP SS I S+ S RAT VVS+MS+P W V TG + EQ AS Q ++ DS
Sbjct: 3044 FLPLSSNIFSKEMS*RATNVVSSMSSPAWFANVKTGKAFIEQQIIASV*CQRFLRIDS 2871
Score = 35.4 bits (71), Expect(2) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 109 LTKSAPK*YR*LWQIQRTSVAASGEPE 29
L+ S P * *LWQIQR SV ASG P+
Sbjct: 2852 LSSSTPM*PL*LWQIQRASVWASGVPK 2772
>emb|AX505646.1| Sequence 341 from Patent WO0216655
Length = 2511
Score = 240 bits (518), Expect = 4e-062
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 2059 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 2238
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+A L G+CLS MGR V
Sbjct: 2239 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPV 2418
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 2419 SYERAVAWKVLNEEENAHCICFVFINWSFV* 2511
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQL K Q SS TFQATA S ET P+ +RH P R+A PC + G S
Sbjct: 2507 TKDQLMNTKQMQ*AFSSSLSTFQATALSYETGLPMLERHIPP*RHAKPCCMICGNSEQRV 2328
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
FLP SS I S+ S RAT VVS+MS+P W V TG + EQ AS Q ++ DS
Sbjct: 2327 FLPLSSNIFSKEMS*RATNVVSSMSSPAWFANVKTGKAFIEQQIIASV*CQRFLRIDS 2154
Score = 35.4 bits (71), Expect(2) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 109 LTKSAPK*YR*LWQIQRTSVAASGEPE 29
L+ S P * *LWQIQR SV ASG P+
Sbjct: 2135 LSSSTPM*PL*LWQIQRASVWASGVPK 2055
>emb|AJ439449.1|ATH439449 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein
(ATHB-15 gene)
Length = 2511
Score = 240 bits (518), Expect = 4e-062
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 2059 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 2238
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+A L G+CLS MGR V
Sbjct: 2239 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPV 2418
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 2419 SYERAVAWKVLNEEENAHCICFVFINWSFV* 2511
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQL K Q SS TFQATA S ET P+ +RH P R+A PC + G S
Sbjct: 2507 TKDQLMNTKQMQ*AFSSSLSTFQATALSYETGLPMLERHIPP*RHAKPCCMICGNSEQRV 2328
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
FLP SS I S+ S RAT VVS+MS+P W V TG + EQ AS Q ++ DS
Sbjct: 2327 FLPLSSNIFSKEMS*RATNVVSSMSSPAWFANVKTGKAFIEQQIIASV*CQRFLRIDS 2154
Score = 35.4 bits (71), Expect(2) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 109 LTKSAPK*YR*LWQIQRTSVAASGEPE 29
L+ S P * *LWQIQR SV ASG P+
Sbjct: 2135 LSSSTPM*PL*LWQIQRASVWASGVPK 2055
>ref|NM_104096.2| Arabidopsis thaliana ATHB-15 (INCURVATA 4); DNA binding /
transcription factor AT1G52150 (ATHB-15) transcript
variant AT1G52150.1 mRNA, complete cds
Length = 3430
Score = 240 bits (518), Expect = 4e-062
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 2776 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 2955
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+A L G+CLS MGR V
Sbjct: 2956 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPV 3135
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 3136 SYERAVAWKVLNEEENAHCICFVFINWSFV* 3228
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQL K Q SS TFQATA S ET P+ +RH P R+A PC + G S
Sbjct: 3224 TKDQLMNTKQMQ*AFSSSLSTFQATALSYETGLPMLERHIPP*RHAKPCCMICGNSEQRV 3045
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
FLP SS I S+ S RAT VVS+MS+P W V TG + EQ AS Q ++ DS
Sbjct: 3044 FLPLSSNIFSKEMS*RATNVVSSMSSPAWFANVKTGKAFIEQQIIASV*CQRFLRIDS 2871
Score = 35.4 bits (71), Expect(2) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 109 LTKSAPK*YR*LWQIQRTSVAASGEPE 29
L+ S P * *LWQIQR SV ASG P+
Sbjct: 2852 LSSSTPM*PL*LWQIQRASVWASGVPK 2772
>ref|NM_179464.1| Arabidopsis thaliana ATHB-15 (INCURVATA 4); DNA binding /
transcription factor AT1G52150 (ATHB-15) transcript
variant AT1G52150.2 mRNA, complete cds
Length = 3433
Score = 240 bits (518), Expect = 4e-062
Identities = 92/151 (60%), Positives = 116/151 (76%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 2779 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 2958
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+A L G+CLS MGR V
Sbjct: 2959 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPV 3138
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 3139 SYERAVAWKVLNEEENAHCICFVFINWSFV* 3231
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQL K Q SS TFQATA S ET P+ +RH P R+A PC + G S
Sbjct: 3227 TKDQLMNTKQMQ*AFSSSLSTFQATALSYETGLPMLERHIPP*RHAKPCCMICGNSEQRV 3048
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
FLP SS I S+ S RAT VVS+MS+P W V TG + EQ AS Q ++ DS
Sbjct: 3047 FLPLSSNIFSKEMS*RATNVVSSMSSPAWFANVKTGKAFIEQQIIASV*CQRFLRIDS 2874
Score = 35.4 bits (71), Expect(2) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 109 LTKSAPK*YR*LWQIQRTSVAASGEPE 29
L+ S P * *LWQIQR SV ASG P+
Sbjct: 2855 LSSSTPM*PL*LWQIQRASVWASGVPK 2775
>ref|NM_125462.2| Arabidopsis thaliana REV (REVOLUTA); DNA binding / lipid binding /
transcription factor AT5G60690 (REV) mRNA, complete cds
Length = 3860
Score = 176 bits (378), Expect(3) = 6e-059
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +1
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2872 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 3051
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 3052 CSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKV 3165
Score = 103 bits (219), Expect(2) = 2e-025
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -1
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 3164 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2985
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2984 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2838
Score = 51.5 bits (106), Expect(3) = 6e-059
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QSY +HLG++L++
Sbjct: 2755 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLT 2850
Score = 41.4 bits (84), Expect(3) = 6e-059
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 3187 NNNLHCLAFSFVNWSFV*FD 3246
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 3245 SNHTKDQFTKEKARQCRL 3192
>gb|AF188994.1| Arabidopsis thaliana homeodomain-leucine zipper protein
interfascicular fiberless 1 (IFL1) mRNA, complete cds
Length = 3169
Score = 176 bits (378), Expect(3) = 6e-059
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +1
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2665 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 2844
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 2845 CSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKV 2958
Score = 103 bits (219), Expect(2) = 2e-025
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -3
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 2957 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2778
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2777 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2631
Score = 51.5 bits (106), Expect(3) = 6e-059
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QSY +HLG++L++
Sbjct: 2548 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLT 2643
Score = 41.4 bits (84), Expect(3) = 6e-059
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 2980 NNNLHCLAFSFVNWSFV*FD 3039
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 3038 SNHTKDQFTKEKARQCRL 2985
>emb|CQ879860.1| Sequence 7 from Patent WO2004063379
Length = 3169
Score = 176 bits (378), Expect(3) = 6e-059
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +1
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2665 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 2844
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 2845 CSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKV 2958
Score = 103 bits (219), Expect(2) = 2e-025
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -3
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 2957 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2778
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2777 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2631
Score = 51.5 bits (106), Expect(3) = 6e-059
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QSY +HLG++L++
Sbjct: 2548 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLT 2643
Score = 41.4 bits (84), Expect(3) = 6e-059
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 2980 NNNLHCLAFSFVNWSFV*FD 3039
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 3038 SNHTKDQFTKEKARQCRL 2985
>gb|AF233592.1|AF233592 Arabidopsis thaliana REVOLUTA mRNA, complete cds
Length = 2821
Score = 176 bits (378), Expect(3) = 6e-059
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +2
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2348 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 2527
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 2528 CSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKV 2641
Score = 103 bits (219), Expect(2) = 2e-025
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -2
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 2640 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2461
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2460 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2314
Score = 51.5 bits (106), Expect(3) = 6e-059
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QSY +HLG++L++
Sbjct: 2231 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLT 2326
Score = 41.4 bits (84), Expect(3) = 6e-059
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 2663 NNNLHCLAFSFVNWSFV*FD 2722
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 2721 SNHTKDQFTKEKARQCRL 2668
>emb|CQ804028.1| Sequence 439 from Patent WO2004035798
Length = 2529
Score = 176 bits (378), Expect(3) = 2e-058
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +1
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2161 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 2340
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 2341 CSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKV 2454
Score = 103 bits (219), Expect(2) = 1e-024
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -2
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 2453 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2274
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2273 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2127
Score = 51.5 bits (106), Expect(3) = 2e-058
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QSY +HLG++L++
Sbjct: 2044 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLT 2139
Score = 39.6 bits (80), Expect(3) = 2e-058
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV* 485
+ N+HCLAF FVNWSFV*
Sbjct: 2476 NNNLHCLAFSFVNWSFV* 2529
Score = 32.2 bits (64), Expect(2) = 1e-024
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTL 437
TKDQ TK+KARQC L
Sbjct: 2525 TKDQFTKEKARQCRL 2481
>emb|BX830562.1|CNS09YQ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB90ZC01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 3152
Score = 176 bits (378), Expect(3) = 3e-058
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = +3 / +1
Query: 129 ESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKAL 308
+S+L + WDHQDA+LCCS K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+
Sbjct: 2776 DSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAI 2955
Query: 309 HAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
++ KLM+QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 2956 CSDFAKLMQQGFARLPSGICVSTMGRHVSYEQAVAWKV 3069
Score = 102 bits (218), Expect(2) = 3e-025
Identities = 51/109 (46%), Positives = 61/109 (55%)
Frame = -2 / -1
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 3068 TFQATACS*LTCLPIVDTQIPEGKRANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 2889
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSA 95
VS+MS P W +NTG EQH+ AS S ++S SE + ++
Sbjct: 2888 VSSMSRPAWFANMNTGCGFNEQHRMASW*SHRSFSTESSLPSESIVSNS 2742
Score = 49.2 bits (101), Expect(3) = 3e-058
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVS 110
G KL GSPEA TL +WI QS+ +HLG++L++
Sbjct: 2659 GSKLSPGSPEAVTLAQWISQSHSHHLGSELLT 2754
Score = 41.4 bits (84), Expect(3) = 3e-058
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 3091 NNNLHCLAFSFVNWSFV*FD 3150
Score = 34.5 bits (69), Expect(2) = 3e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 3149 SNHTKDQFTKEKARQCRL 3096
>gb|DR751613.1|DR751613 44-L022148-065-007-D06-SeLB MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 007-D06, mRNA sequence
Length = 920
Score = 154 bits (331), Expect(2) = 2e-057
Identities = 59/102 (57%), Positives = 77/102 (75%)
Frame = +3 / -3
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 621 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 442
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+Q
Sbjct: 441 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQ 316
Score = 90.9 bits (192), Expect(2) = 2e-057
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +3 / -1
Query: 327 LMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV 482
L QG+A L G+CLS MGR VSYE+AVAWKVL E+ N HC+ F F+NWSFV
Sbjct: 248 LFFQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 93
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete
sequence
Length = 69817
Score = 95.5 bits (202), Expect(4) = 2e-052
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +3 / +2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QGYA+LPAGVC S MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 32834 QGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 32983
Score = 89.0 bits (188), Expect(4) = 2e-052
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+Q + +
Sbjct: 32610 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQVFVF 32765
Score = 68.4 bits (143), Expect(2) = 7e-022
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISF 323
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC F
Sbjct: 32982 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCKTKF 32821
Score = 57.4 bits (119), Expect(2) = 7e-022
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 32752 CCMILGNSEQRALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 32609
Score = 42.3 bits (86), Expect(4) = 2e-052
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 108 SHSDQAGESLLTMFWDHQDAVLCCSFK 188
S S +G++LL W+H DA+LCCS K
Sbjct: 32432 SDSQTSGDTLLHQLWNHSDAILCCSLK 32512
Score = 37.7 bits (76), Expect(4) = 2e-052
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 36 SPEAATLVRWICQSYRYHL 92
SPEA TLVRWI +SYRY +
Sbjct: 32259 SPEALTLVRWISRSYRYFI 32315
>emb|Y11122.1|ATHB14 A.thaliana ATHB-14 gene
Length = 5316
Score = 95.5 bits (202), Expect(4) = 3e-052
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +3 / +1
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QGYA+LPAGVC S MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 4903 QGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 5052
Score = 89.0 bits (188), Expect(4) = 3e-052
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3 / +2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+Q + +
Sbjct: 4679 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQVFVF 4834
Score = 68.4 bits (143), Expect(2) = 8e-022
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISF 323
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC F
Sbjct: 5051 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCKTKF 4890
Score = 57.4 bits (119), Expect(2) = 8e-022
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 4821 CCMILGNSEQRALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 4678
Score = 42.3 bits (86), Expect(4) = 3e-052
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3 / +1
Query: 108 SHSDQAGESLLTMFWDHQDAVLCCSFK 188
S S +G++LL W+H DA+LCCS K
Sbjct: 4501 SDSQTSGDTLLHQLWNHSDAILCCSLK 4581
Score = 37.7 bits (76), Expect(4) = 3e-052
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 36 SPEAATLVRWICQSYRYHL 92
SPEA TLVRWI +SYRY +
Sbjct: 4328 SPEALTLVRWISRSYRYFI 4384
>emb|BX815318.1|CNS0AATA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS51ZC10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2956
Score = 158 bits (339), Expect(3) = 5e-052
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 2536 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 2715
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 2716 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 2826
Score = 105 bits (223), Expect(3) = 1e-026
Identities = 50/101 (49%), Positives = 59/101 (58%)
Frame = -2 / -3
Query: 487 HQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSAC 308
HQT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 2828 HQTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQ 2649
Query: 307 SAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 2648 RALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 2526
Score = 45.5 bits (93), Expect(3) = 5e-052
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 2344 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 2454
Score = 41.8 bits (85), Expect(3) = 5e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 2461 GDTLLKQLWDHSDAILCCSLK 2523
Score = 27.2 bits (53), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 2432 RSAPV*IL*LRVIQRTRVRASGE 2364
Score = 27.2 bits (53), Expect(3) = 1e-026
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 2519 REQHNMASLWSQSCLSNVSP 2460
>ref|NM_102785.3| Arabidopsis thaliana PHV (PHAVOLUTA); DNA binding / transcription
factor AT1G30490 (PHV) mRNA, complete cds
Length = 2878
Score = 158 bits (339), Expect(3) = 5e-052
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 2395 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 2574
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 2575 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 2685
Score = 105 bits (223), Expect(3) = 1e-026
Identities = 50/101 (49%), Positives = 59/101 (58%)
Frame = -2 / -3
Query: 487 HQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSAC 308
HQT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 2687 HQTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQ 2508
Query: 307 SAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 2507 RALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 2385
Score = 45.5 bits (93), Expect(3) = 5e-052
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 2203 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 2313
Score = 41.8 bits (85), Expect(3) = 5e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 2320 GDTLLKQLWDHSDAILCCSLK 2382
Score = 27.2 bits (53), Expect(3) = 1e-026
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 2291 RSAPV*IL*LRVIQRTRVRASGE 2223
Score = 27.2 bits (53), Expect(3) = 1e-026
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 2378 REQHNMASLWSQSCLSNVSP 2319
>emb|AX506311.1| Sequence 1006 from Patent WO0216655
Length = 2526
Score = 158 bits (339), Expect(3) = 5e-052
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 2236 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 2415
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 2416 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 2526
Score = 101 bits (215), Expect(3) = 2e-025
Identities = 49/100 (49%), Positives = 58/100 (58%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 2525 QTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQR 2346
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 2345 ALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 2226
Score = 45.5 bits (93), Expect(3) = 5e-052
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 2044 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 2154
Score = 41.8 bits (85), Expect(3) = 5e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 2161 GDTLLKQLWDHSDAILCCSLK 2223
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 2132 RSAPV*IL*LRVIQRTRVRASGE 2064
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 2219 REQHNMASLWSQSCLSNVSP 2160
>emb|AJ440967.1|ATH440967 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein (hb9
gene)
Length = 2526
Score = 158 bits (339), Expect(3) = 5e-052
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 2236 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 2415
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 2416 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 2526
Score = 101 bits (215), Expect(3) = 2e-025
Identities = 49/100 (49%), Positives = 58/100 (58%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 2525 QTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQR 2346
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 2345 ALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 2226
Score = 45.5 bits (93), Expect(3) = 5e-052
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 2044 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 2154
Score = 41.8 bits (85), Expect(3) = 5e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 2161 GDTLLKQLWDHSDAILCCSLK 2223
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 2132 RSAPV*IL*LRVIQRTRVRASGE 2064
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 2219 REQHNMASLWSQSCLSNVSP 2160
>gb|DR751584.1|DR751584 60-L022148-065-007-D08-SeLB MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 007-D08, mRNA sequence
Length = 875
Score = 157 bits (338), Expect(3) = 7e-052
Identities = 63/96 (65%), Positives = 77/96 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 381 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 202
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV 482
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV
Sbjct: 201 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV 94
Score = 99.1 bits (210), Expect(3) = 8e-025
Identities = 48/99 (48%), Positives = 57/99 (57%)
Frame = -2 / +2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
T DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S A
Sbjct: 95 TNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQRA 274
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 275 LRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 391
Score = 45.5 bits (93), Expect(3) = 7e-052
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 573 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 463
Score = 41.8 bits (85), Expect(3) = 7e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 456 GDTLLKQLWDHSDAILCCSLK 394
Score = 27.2 bits (53), Expect(3) = 8e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 485 RSAPV*IL*LRVIQRTRVRASGE 553
Score = 27.2 bits (53), Expect(3) = 8e-025
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +2
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 398 REQHNMASLWSQSCLSNVSP 457
>gb|BX835677.1|BX835677 BX835677 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS85ZB09 3PRIM, mRNA
sequence
Length = 1142
Score = 155 bits (333), Expect(3) = 3e-051
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +3 / -1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M QGYA LPAG+C+S
Sbjct: 422 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIM*QGYANLPAGICVS 243
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 242 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 132
Score = 104 bits (222), Expect(3) = 2e-026
Identities = 50/101 (49%), Positives = 59/101 (58%)
Frame = -2 / +1
Query: 487 HQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSAC 308
HQT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 130 HQTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCYMILANSEQ 309
Query: 307 SAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 310 RALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 432
Score = 45.5 bits (93), Expect(3) = 3e-051
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 614 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 504
Score = 41.8 bits (85), Expect(3) = 3e-051
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 497 GDTLLKQLWDHSDAILCCSLK 435
Score = 27.2 bits (53), Expect(3) = 2e-026
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 526 RSAPV*IL*LRVIQRTRVRASGE 594
Score = 27.2 bits (53), Expect(3) = 2e-026
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 439 REQHNMASLWSQSCLSNVSP 498
>gb|AY099791.1| Arabidopsis thaliana homeodomain transcription factor (At2g34710)
mRNA, complete cds
Length = 3062
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 2547 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 2726
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 2727 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 2837
Score = 116 bits (248), Expect(3) = 5e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 2836 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 2657
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 2656 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 2546
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / +3
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 2379 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 2483
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 2446 RSAPV*RL*LREIQRTRVRASGE 2378
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + E AAQD + ++PE Q+ + +R+
Sbjct: 2555 ENR*SVCFEGAAQDCIRVIPELMQQRVTTGLRI 2457
>ref|NM_129025.2| Arabidopsis thaliana PHB (PHABULOSA); DNA binding / transcription
factor AT2G34710 (PHB) mRNA, complete cds
Length = 3060
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 2545 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 2724
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 2725 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 2835
Score = 116 bits (248), Expect(3) = 5e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 2834 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 2655
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 2654 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 2544
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 2377 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 2481
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 2444 RSAPV*RL*LREIQRTRVRASGE 2376
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + E AAQD + ++PE Q+ + +R+
Sbjct: 2553 ENR*SVCFEGAAQDCIRVIPELMQQRVTTGLRI 2455
>gb|BT000335.1| Arabidopsis thaliana homeodomain transcription factor (At2g34710)
mRNA, complete cds
Length = 2663
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 2269 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 2448
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 2449 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 2559
Score = 116 bits (248), Expect(3) = 5e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / -1
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 2558 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 2379
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 2378 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 2268
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 2101 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 2205
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 2168 RSAPV*RL*LREIQRTRVRASGE 2100
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1 / -3
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + E AAQD + ++PE Q+ + +R+
Sbjct: 2277 ENR*SVCFEGAAQDCIRVIPELMQQRVTTGLRI 2179
>emb|AX507862.1| Sequence 2557 from Patent WO0216655
Length = 2559
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 2269 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 2448
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 2449 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 2559
Score = 116 bits (248), Expect(3) = 5e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 2558 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 2379
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 2378 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 2268
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 2101 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 2205
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 2168 RSAPV*RL*LREIQRTRVRASGE 2100
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + E AAQD + ++PE Q+ + +R+
Sbjct: 2277 ENR*SVCFEGAAQDCIRVIPELMQQRVTTGLRI 2179
>emb|AJ441291.1|ATH441291 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein 14
(ATHB-14 gene)
Length = 2559
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 2269 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 2448
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 2449 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 2559
Score = 116 bits (248), Expect(3) = 5e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / -2
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 2558 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 2379
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 2378 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 2268
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 2101 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 2205
Score = 28.6 bits (56), Expect(3) = 5e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 2168 RSAPV*RL*LREIQRTRVRASGE 2100
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + E AAQD + ++PE Q+ + +R+
Sbjct: 2277 ENR*SVCFEGAAQDCIRVIPELMQQRVTTGLRI 2179
>gb|BX836701.1|BX836701 BX836701 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB76ZE12 3PRIM, mRNA sequence
Length = 1098
Score = 177 bits (382), Expect(2) = 9e-051
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S
Sbjct: 478 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCAS 299
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKVL +D + HCLAF FVNWSFV*
Sbjct: 298 SMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV* 188
Score = 116 bits (248), Expect(3) = 3e-029
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -2 / +3
Query: 484 QTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACS 305
QT DQ T KA+Q SS RTF ACS*+T P+ D HTPAGR A*PC + G S
Sbjct: 189 QTNDQFTNMKAKQWFDSSSSRTFHTVACS*DTILPMLDAHTPAGR*A*PCCMILGNSEQR 368
Query: 304 AFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
A PGSS +LS + S RAT+VVS+MS P+W V TG
Sbjct: 369 ALRPGSSRVLSSIMS*RATRVVSSMSKPVWFANVKTG 479
Score = 45.1 bits (92), Expect(2) = 9e-051
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / -3
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLL 140
SPEA TLVRWI +SY H GADL Q L
Sbjct: 646 SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 542
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / +3
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L +IQRT V ASGE
Sbjct: 579 RSAPV*RL*LREIQRTRVRASGE 647
Score = 23.5 bits (45), Expect(3) = 3e-029
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 209 ESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRV 111
E++ + +E AAQD + ++PE Q+ + +R+
Sbjct: 470 ENR*SVCIEGAAQDCIRVIPELMQQRVTTGLRI 568
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 91.3 bits (193), Expect(4) = 1e-050
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -3
Query: 327 LMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L QG+A L G+CLS MGR VSYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 3769335 LFFQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV* 3769177
Score = 79.9 bits (168), Expect(4) = 1e-050
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3 / -2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+Q
Sbjct: 3769546 PVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQ 3769403
Score = 44.1 bits (90), Expect(4) = 1e-050
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3 / -2
Query: 81 RYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
R ++G +L+ + ES+L W H DA++CCS K
Sbjct: 3769756 RGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMK 3769649
Score = 43.2 bits (88), Expect(4) = 1e-050
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / -3
Query: 33 GSPEAATLVRWICQSYRY 86
G+PEA TL RWICQSYRY
Sbjct: 3769896 GTPEAQTLARWICQSYRY 3769843
>gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 sequence, complete sequence
Length = 110893
Score = 91.3 bits (193), Expect(4) = 1e-050
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -2
Query: 327 LMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L QG+A L G+CLS MGR VSYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 101559 LFFQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV* 101401
Score = 79.9 bits (168), Expect(4) = 1e-050
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3 / -1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+Q
Sbjct: 101770 PVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQ 101627
Score = 44.1 bits (90), Expect(4) = 1e-050
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3 / -1
Query: 81 RYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
R ++G +L+ + ES+L W H DA++CCS K
Sbjct: 101980 RGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMK 101873
Score = 43.2 bits (88), Expect(4) = 1e-050
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / -2
Query: 33 GSPEAATLVRWICQSYRY 86
G+PEA TL RWICQSYRY
Sbjct: 102120 GTPEAQTLARWICQSYRY 102067
>gb|AY902309.1| Arabidopsis thaliana CORONA (CNA) gene, complete cds
Length = 4250
Score = 91.3 bits (193), Expect(4) = 1e-050
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +2
Query: 327 LMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L QG+A L G+CLS MGR VSYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 3989 LFFQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV* 4147
Score = 79.9 bits (168), Expect(4) = 1e-050
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+Q
Sbjct: 3778 PVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQ 3921
Score = 44.1 bits (90), Expect(4) = 1e-050
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3 / +2
Query: 81 RYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
R ++G +L+ + ES+L W H DA++CCS K
Sbjct: 3554 RGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMK 3661
Score = 43.2 bits (88), Expect(4) = 1e-050
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRY 86
G+PEA TL RWICQSYRY
Sbjct: 3413 GTPEAQTLARWICQSYRY 3466
>dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24
Length = 77999
Score = 79.9 bits (168), Expect(5) = 2e-048
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
+PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+ ++ KLM+Q
Sbjct: 44753 QPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQ 44899
Score = 62.5 bits (130), Expect(5) = 2e-048
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +3 / +1
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 44974 QGFACLPSGICVSTMGRHVSYEQAVAWKV 45060
Score = 43.2 bits (88), Expect(5) = 2e-048
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3 / +3
Query: 63 WICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
++C S + L S + +S+L + WDHQDA+LCCS K
Sbjct: 44547 YVCFSSHHLGSELLTIDSLGSDDSVLKLLWDHQDAILCCSLK 44672
Score = 41.8 bits (85), Expect(5) = 2e-048
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYRY 86
G KL GSPEA TL +WI QSYR+
Sbjct: 44408 GSKLSPGSPEAVTLAQWISQSYRW 44479
Score = 41.4 bits (84), Expect(5) = 2e-048
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 45082 NNNLHCLAFSFVNWSFV*FD 45141
>gb|AY170127.1| Arabidopsis thaliana homeodomain-leucine zipper protein (IFL1) gene,
complete cds
Length = 6711
Score = 79.9 bits (168), Expect(5) = 2e-048
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
+PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+ ++ KLM+Q
Sbjct: 6102 QPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQ 6248
Score = 62.5 bits (130), Expect(5) = 2e-048
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +3 / +2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
QG+A LP+G+C+S MGRHVSYEQAVAWKV
Sbjct: 6323 QGFACLPSGICVSTMGRHVSYEQAVAWKV 6409
Score = 43.2 bits (88), Expect(5) = 2e-048
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3 / +1
Query: 63 WICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
++C S + L S + +S+L + WDHQDA+LCCS K
Sbjct: 5896 YVCFSSHHLGSELLTIDSLGSDDSVLKLLWDHQDAILCCSLK 6021
Score = 41.8 bits (85), Expect(5) = 2e-048
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 15 GQKLISGSPEAATLVRWICQSYRY 86
G KL GSPEA TL +WI QSYR+
Sbjct: 5757 GSKLSPGSPEAVTLAQWISQSYRW 5828
Score = 41.4 bits (84), Expect(5) = 2e-048
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 6431 NNNLHCLAFSFVNWSFV*FD 6490
>emb|BX818192.1|CNS0AEBW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZF04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 824
Score = 146 bits (314), Expect(3) = 4e-047
Identities = 60/97 (61%), Positives = 72/97 (74%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLET L+ LQD+ LDK D GR+AL +E K+M+QGYA LPAG+C
Sbjct: 388 PVFTFANQAGLDMLETKLLELQDIMLDKTLDNSGRRALCSEFAKIMQQGYANLPAGICFL 567
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ + + HCLAF V+WSFV*
Sbjct: 568 SMGRPVSYEQATVWKVVDNNESNHCLAFTLVSWSFV* 678
Score = 92.3 bits (195), Expect(3) = 2e-021
Identities = 44/101 (43%), Positives = 56/101 (55%)
Frame = -2 / -1
Query: 487 HQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSAC 308
HQT DQLT+ KA+Q TF ACS ET P+ +H PAGR+A PC + S
Sbjct: 680 HQTNDQLTRVKAKQWFDSLLSTTFHTVACSYETGLPMLKKHIPAGRFAYPCCMILANSEQ 501
Query: 307 SAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P S +LS + S + +VS+MS P W VNTG +L
Sbjct: 500 RALRPELSSVLSSIIS*SSKSLVSSMSKPAWFANVNTGEAL 378
Score = 41.8 bits (85), Expect(3) = 4e-047
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 313 GDTLLKQLWDHSDAILCCSLK 375
Score = 40.5 bits (82), Expect(3) = 4e-047
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H A+L Q+
Sbjct: 196 GSMQLPTSPEALTLVRWITRSYSIHTDAELFGADSQS 306
Score = 27.2 bits (53), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 371 REQHNMASLWSQSCLSNVSP 312
Score = 22.6 bits (43), Expect(3) = 2e-021
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 100 SAPK*YR*LWQIQRTSVAASGE 35
SA * *L IQRT V ASGE
Sbjct: 281 SASV*IL*LRVIQRTRVRASGE 216
>emb|BX816452.1|CNS0AD1U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH49ZH04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1088
Score = 140 bits (301), Expect(3) = 1e-046
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 798 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 977
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVN 470
MGR VSYEQA WKV+ ++ + HC F ++
Sbjct: 978 SMGRPVSYEQATVWKVVDDNESNHCFPFTLLS 1073
Score = 89.0 bits (188), Expect(3) = 1e-021
Identities = 43/98 (43%), Positives = 54/98 (55%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
+ +L + K +Q S TF ACS ET P+ D H PAGR+A PC + S A
Sbjct: 1081 RSELRRVKGKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQRAL 902
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 901 RPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 788
Score = 45.5 bits (93), Expect(3) = 1e-046
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQA 125
G + SPEA TLVRWI +SY H GADL Q+
Sbjct: 606 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQS 716
Score = 41.4 bits (84), Expect(3) = 1e-046
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 723 GDTLLKQVWDHSDAILCCSLK 785
Score = 27.2 bits (53), Expect(3) = 1e-021
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 103 KSAPK*YR*LWQIQRTSVAASGE 35
+SAP * *L IQRT V ASGE
Sbjct: 694 RSAPV*IL*LRVIQRTRVRASGE 626
Score = 26.7 bits (52), Expect(3) = 1e-021
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ + + SP
Sbjct: 781 REQHNMASLWSQTCLSNVSP 722
>gb|CF773335.1|CF773335 AG_FSL_15G09 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 15G09, mRNA sequence
Length = 387
Score = 155 bits (334), Expect(2) = 2e-044
Identities = 59/103 (57%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFGN 215
+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF N
Sbjct: 1 TPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFAN 180
Query: 216 QMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGY 344
Q G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+
Sbjct: 181 QAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGF 309
Score = 46.0 bits (94), Expect(2) = 2e-044
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3 / +2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWK 419
+ +A L G+CLS MGR VSYE+A AWK
Sbjct: 302 RAFACLQGGICLSSMGRPVSYERAAAWK 385
>ref|NM_119441.3| Arabidopsis thaliana ATHB-8 (HOMEOBOX GENE 8); DNA binding /
transcription factor AT4G32880 (ATHB-8) mRNA, complete
cds
Length = 3005
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / +3
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 2697 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 2876
Query: 474 SFV* 485
SF+*
Sbjct: 2877 SFI* 2888
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 2595 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 2702
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 2442 SPEAHTLARWISHSYRCYLGVDLL 2513
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 2523 GTDLLKSLWHHPDAVMCCSLK 2585
>gb|AY099631.1| Arabidopsis thaliana HD-zip transcription factor (athb-8) (At4g32880)
mRNA, complete cds
Length = 3004
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / +3
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 2697 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 2876
Query: 474 SFV* 485
SF+*
Sbjct: 2877 SFI* 2888
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 2595 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 2702
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 2442 SPEAHTLARWISHSYRCYLGVDLL 2513
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 2523 GTDLLKSLWHHPDAVMCCSLK 2585
>emb|AX505386.1| Sequence 81 from Patent WO0216655
Length = 2502
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / +1
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 2311 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 2490
Query: 474 SFV* 485
SF+*
Sbjct: 2491 SFI* 2502
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 2209 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 2316
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 2056 SPEAHTLARWISHSYRCYLGVDLL 2127
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 2137 GTDLLKSLWHHPDAVMCCSLK 2199
>gb|BT008798.1| Arabidopsis thaliana At4g32880 gene, complete cds
Length = 2502
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / +1
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 2311 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 2490
Query: 474 SFV* 485
SF+*
Sbjct: 2491 SFI* 2502
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 2209 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 2316
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 2056 SPEAHTLARWISHSYRCYLGVDLL 2127
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 2137 GTDLLKSLWHHPDAVMCCSLK 2199
>emb|AJ441292.1|ATH441292 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein 8
(hb-8 gene)
Length = 2502
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / +1
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 2311 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 2490
Query: 474 SFV* 485
SF+*
Sbjct: 2491 SFI* 2502
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 2209 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 2316
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 2056 SPEAHTLARWISHSYRCYLGVDLL 2127
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 2137 GTDLLKSLWHHPDAVMCCSLK 2199
>gb|AV535435.1|AV535435 AV535435 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB096c10F 3', mRNA sequence
Length = 561
Score = 96.8 bits (205), Expect(4) = 3e-044
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / -2
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 296 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 117
Query: 474 SFV* 485
SF+*
Sbjct: 116 SFI* 105
Score = 63.8 bits (133), Expect(4) = 3e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / -2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 398 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 291
Score = 40.9 bits (83), Expect(4) = 3e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 551 SPEAHTLARWISHSYRCYLGVDLL 480
Score = 35.4 bits (71), Expect(4) = 3e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 470 GTDLLKSLWHHPDAVMCCSLK 408
>gb|AV803829.1|AV803829 AV803829 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-36-P06 3',
mRNA sequence
Length = 410
Score = 180 bits (388), Expect = 4e-044
Identities = 70/107 (65%), Positives = 87/107 (81%)
Frame = +3 / -2
Query: 165 AVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGY 344
A++CCS K PVFTF NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+QG+
Sbjct: 409 AIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGF 230
Query: 345 AYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
A L G+CLS MGR VSYE+AVAWKVL E+ N HC+ F F+NWSFV*
Sbjct: 229 ACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV* 89
>gb|DR751598.1|DR751598 52-L022148-065-007-D07-SeLB MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 007-D07, mRNA sequence
Length = 928
Score = 96.4 bits (204), Expect(4) = 6e-044
Identities = 32/63 (50%), Positives = 48/63 (76%)
Frame = +3 / -3
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 281 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 102
Query: 474 SFV 482
SF+
Sbjct: 101 SFI 93
Score = 63.8 bits (133), Expect(4) = 6e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 383 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 276
Score = 40.9 bits (83), Expect(4) = 6e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 536 SPEAHTLARWISHSYRCYLGVDLL 465
Score = 35.0 bits (70), Expect(4) = 6e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / -3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 455 GTDLLKSLWRHPDAVMCCSLK 393
>gb|DR751573.1|DR751573 68-L022148-065-007-D09-SeLB MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 007-D09, mRNA sequence
Length = 925
Score = 96.4 bits (204), Expect(4) = 6e-044
Identities = 32/63 (50%), Positives = 48/63 (76%)
Frame = +3 / -3
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 281 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNW 102
Query: 474 SFV 482
SF+
Sbjct: 101 SFI 93
Score = 63.8 bits (133), Expect(4) = 6e-044
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 383 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 276
Score = 40.9 bits (83), Expect(4) = 6e-044
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 36 SPEAATLVRWICQSYRYHLGADLV 107
SPEA TL RWI SYR +LG DL+
Sbjct: 536 SPEAHTLARWISHSYRCYLGVDLL 465
Score = 35.0 bits (70), Expect(4) = 6e-044
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / -3
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G LL W H DAV+CCS K
Sbjct: 455 GTDLLKSLWRHPDAVMCCSLK 393
>dbj|AK221046.1| Arabidopsis thaliana mRNA for HD-Zip protein, partial cds, clone:
RAFL22-75-F10
Length = 589
Score = 158 bits (339), Expect(2) = 6e-044
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +3 / +2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
PVFTF NQ G+DMLETTLVALQD+ LDK D+ GR+AL +E K+M+QGYA LPAG+C+S
Sbjct: 110 PVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVS 289
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR VSYEQA WKV+ ++ + HCLAF V+WSFV*
Sbjct: 290 SMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV* 400
Score = 105 bits (223), Expect(2) = 1e-023
Identities = 50/101 (49%), Positives = 59/101 (58%)
Frame = -2 / -2
Query: 487 HQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSAC 308
HQT DQLT+ KA+Q S TF ACS ET P+ D H PAGR+A PC + S
Sbjct: 402 HQTNDQLTRVKAKQWFDSLSSTTFHTVACSYETGLPMLDTHIPAGRFAYPCCMILANSEQ 223
Query: 307 SAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSL 185
A P SS +LS + S AT VVS+MS P W VNTG +L
Sbjct: 222 RALRPESSSVLSSIIS*SATSVVSSMSKPAWFANVNTGEAL 100
Score = 41.8 bits (85), Expect(2) = 6e-044
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 126 GESLLTMFWDHQDAVLCCSFK 188
G++LL WDH DA+LCCS K
Sbjct: 35 GDTLLKQLWDHSDAILCCSLK 97
Score = 27.2 bits (53), Expect(2) = 1e-023
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 184 KEQHKTAS*WSQNIVKSDSP 125
+EQH AS WSQ+ + + SP
Sbjct: 93 REQHNMASLWSQSCLSNVSP 34
>gb|AI998244.1|AI998244 701544894 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701544894, mRNA sequence
Length = 425
Score = 143 bits (307), Expect(2) = 2e-039
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 159 QDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
QDA+LCCS K +PV N +DMLETT VALQD+TL+KI DE GRKA+ ++ KLM+Q
Sbjct: 423 QDAILCCSLKPQPVCXXANXAXLDMLETTXVALQDITLEKIXDESGRKAICSDFAKLMQQ 244
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKV 422
G+A LP+G C+S MGRHVSYEQAVAWKV
Sbjct: 243 GFACLPSGXCVSTMGRHVSYEQAVAWKV 160
Score = 87.7 bits (185), Expect(2) = 1e-020
Identities = 44/87 (50%), Positives = 48/87 (55%)
Frame = -2 / +2
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 161 TFQATACS*LTCLPIVDTQXPXGKQANPCCISLAKSEQIALRPDSSXIFSSVISCKATXV 340
Query: 241 VSNMSTPIWLPKVNTGFSLKEQHKTAS 161
VS+MS TG EQH+ AS
Sbjct: 341 VSSMSRXAXFANXQTGCGFNEQHRMAS 421
Score = 41.4 bits (84), Expect(2) = 2e-039
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / -3
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 138 NNNLHCLAFSFVNWSFV*FD 79
Score = 34.5 bits (69), Expect(2) = 1e-020
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 80 SNHTKDQFTKEKARQCRL 133
>gb|AV531880.1|AV531880 AV531880 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB032a12F 3', mRNA sequence
Length = 581
Score = 140 bits (301), Expect(2) = 1e-038
Identities = 57/81 (70%), Positives = 69/81 (85%)
Frame = +3 / -2
Query: 180 SFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPA 359
S K +PVF F NQ G+DMLETTLVALQD+TL+KI DE GRKA+ ++ KLM+QG+A LP+
Sbjct: 580 SLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPS 401
Query: 360 GVCLSGMGRHVSYEQAVAWKV 422
G+C+S MGRHVSYEQAVAWKV
Sbjct: 400 GICVSTMGRHVSYEQAVAWKV 338
Score = 91.3 bits (193), Expect(2) = 8e-022
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = -2 / +3
Query: 421 TFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCRATKV 242
TFQATACS* T PI D P G+ A PC IS S A P SS I S V SC+AT V
Sbjct: 339 TFQATACS*LTCLPIVDTQIPEGKQANPCCISLAKSEQIALRPDSSNIFSSVISCKATSV 518
Query: 241 VSNMSTPIWLPKVNTGFSLKE 179
VS+MS P W +NTG E
Sbjct: 519 VSSMSRPAWFANMNTGCGFNE 581
Score = 41.4 bits (84), Expect(2) = 1e-038
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / -2
Query: 432 DGNVHCLAFCFVNWSFV*CD 491
+ N+HCLAF FVNWSFV* D
Sbjct: 316 NNNLHCLAFSFVNWSFV*FD 257
Score = 34.5 bits (69), Expect(2) = 8e-022
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 490 SHQTKDQLTKQKARQCTL 437
S+ TKDQ TK+KARQC L
Sbjct: 258 SNHTKDQFTKEKARQCRL 311
>gb|AV523113.1|AV523113 AV523113 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL16d11F 3', mRNA
sequence
Length = 415
Score = 160 bits (344), Expect = 4e-038
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = +3 / -1
Query: 222 GVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYE 401
G+DMLETTLVALQD+ LDK DEPGRKAL +E PK+M+QGYA+LPAGVC S MGR VSYE
Sbjct: 415 GLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYE 236
Query: 402 QAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QA WKVL +D + HCLAF FVNWSFV*
Sbjct: 235 QATVWKVLEDDESNHCLAFMFVNWSFV* 152
>gb|CW843912.1|CW843912 GT10271.Ds3.09.29.2002.jw63.524 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT10271, DNA sequence
Length = 524
Score = 87.2 bits (184), Expect(3) = 2e-037
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+ LDK DEPGRK L +E PK+M+Q + +
Sbjct: 384 PVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKGLCSEFPKIMQQVFVF 229
Score = 76.7 bits (161), Expect(3) = 2e-037
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3 / -2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAF 458
QGYA+LPAGVC S MGR VSYEQA WKVL +D + HCLAF
Sbjct: 160 QGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAF 38
Score = 32.2 bits (64), Expect(3) = 2e-037
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 150 WDHQDAVLCCSFK 188
W+H DA+LCCS K
Sbjct: 520 WNHSDAILCCSLK 482
>emb|BX813689.1|CNS0ADQZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB33ZB08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1249
Score = 156 bits (336), Expect = 5e-037
Identities = 62/117 (52%), Positives = 80/117 (68%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
G+PEA TL RWICQSYR ++G +L+ + ES+L W H DA++CCS K PVFTF
Sbjct: 653 GTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFA 832
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMG 383
NQ G+DMLETTLVALQD++L+KI D+ GRK L +E P++M+Q AG G
Sbjct: 833 NQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQASRAFKAGYVSQAWG 1003
>gb|BP613588.1|BP613588 BP613588 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-K11 3',
mRNA sequence
Length = 505
Score = 96.8 bits (205), Expect(3) = 1e-036
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3 / -3
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNW 473
G+K L +E P++M+QG+ + G+C+S MGR V+YE+AV WKVL +D + HC+ F F+NW
Sbjct: 326 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRPVTYEKAVGWKVLNDDEDPHCICFMFLNW 147
Query: 474 SFV* 485
SF+*
Sbjct: 146 SFI* 135
Score = 63.8 bits (133), Expect(3) = 1e-036
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRK 302
PVFTF NQ G+DMLETTLVALQD+TLDKI D K
Sbjct: 428 PVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGK 321
Score = 33.1 bits (66), Expect(3) = 1e-036
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 135 LLTMFWDHQDAVLCCSFK 188
LL W H DAV+CCS K
Sbjct: 491 LLKSLWHHPDAVMCCSLK 438
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,447,196,320
Number of Sequences: 1013581
Number of extensions: 20187777
Number of successful extensions: 139647
Number of sequences better than 1.0e-020: 95
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 43827116212
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)