TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.2
(494 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU238898.1|AU238898 AU238898 RAFL19 Arabidopsis thaliana... 179 4e-044
gb|BT005586.1| Arabidopsis thaliana clone U50754 putative L... 179 4e-044
dbj|AK118044.1| Arabidopsis thaliana At2g45800 mRNA for put... 179 4e-044
ref|NM_130143.2| Arabidopsis thaliana zinc ion binding AT2G... 179 4e-044
gb|BT022103.1| Arabidopsis thaliana At3g61230 mRNA, complet... 179 6e-044
ref|NM_115987.2| Arabidopsis thaliana zinc ion binding AT3G... 179 6e-044
emb|BX825681.1|CNS0A6AT Arabidopsis thaliana Full-length cD... 175 1e-042
emb|BX821642.1|CNS0A9BE Arabidopsis thaliana Full-length cD... 171 2e-041
gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence 125 4e-041
ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G... 125 4e-041
emb|BX817923.1|CNS0AE65 Arabidopsis thaliana Full-length cD... 123 2e-040
ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding A... 117 1e-037
ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding A... 117 1e-037
ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding A... 117 1e-037
ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G... 117 1e-037
gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, comp... 117 1e-037
gb|AY063924.1| Arabidopsis thaliana putative transcription ... 117 1e-037
ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G... 117 1e-037
emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cD... 117 1e-037
emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cD... 117 1e-037
emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription fa... 117 1e-037
emb|CS137644.1| Sequence 615 from Patent WO2005047516 117 1e-037
gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Ara... 117 1e-037
gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA... 117 1e-037
gb|BP561356.1|BP561356 BP561356 RAFL6 Arabidopsis thaliana ... 117 1e-037
gb|AY091249.1| Arabidopsis thaliana putative transcription ... 117 1e-037
gb|AV552065.1|AV552065 AV552065 Arabidopsis thaliana roots ... 117 1e-037
gb|AF370574.1|AF370574 Arabidopsis thaliana transcription f... 115 7e-037
gb|CB254686.1|CB254686 62-E018429-019-008-L15-T7R MPIZ-ADIS... 117 7e-037
gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA... 111 1e-035
ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G... 111 1e-035
emb|CS137532.1| Sequence 503 from Patent WO2005047516 111 1e-035
emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cD... 111 1e-035
emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cD... 111 1e-035
gb|AV553161.1|AV553161 AV553161 Arabidopsis thaliana roots ... 117 2e-035
emb|AX412775.1| Sequence 539 from Patent WO0222675 109 6e-035
gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA... 109 6e-035
gb|AV554564.1|AV554564 AV554564 Arabidopsis thaliana roots ... 117 8e-035
gb|BE038914.1|BE038914 AB05H02 AB Arabidopsis thaliana cDNA... 111 1e-034
gb|CF652626.1|CF652626 67-L020164-066-001-E18-SP6P MPIZ-ADI... 113 1e-032
gb|BP562171.1|BP562171 BP562171 RAFL9 Arabidopsis thaliana ... 117 2e-032
gb|CB264898.1|CB264898 24-E014661-035-002-P06-T7R MPIZ-ADIS... 117 1e-031
gb|CK119661.1|CK119661 211c15.p1 AtM1 Arabidopsis thaliana ... 117 1e-031
gb|AV554173.1|AV554173 AV554173 Arabidopsis thaliana roots ... 115 1e-030
emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cD... 64 2e-028
ref|NM_100894.2| Arabidopsis thaliana transcription factor/... 100 3e-028
gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, comp... 100 3e-028
gb|AF370569.1|AF370569 Arabidopsis thaliana similar to tran... 100 3e-028
gb|CB263957.1|CB263957 02-E011587-008-014-D07-pBl2 MPIZ-ADI... 100 3e-028
gb|CB263958.1|CB263958 02-E011587-008-014-D07-rev MPIZ-ADIS... 100 3e-028
emb|AX412728.1| Sequence 492 from Patent WO0222675 100 3e-028
gb|CB263312.1|CB263312 26-E8880-008-014-D07-pBl2 MPIZ-ADIS-... 100 3e-028
gb|CB254062.1|CB254062 81-E010933-019-003-B21-T7R MPIZ-ADIS... 100 3e-028
gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis th... 66 5e-028
gb|AV536967.1|AV536967 AV536967 Arabidopsis thaliana liquid... 103 1e-027
ref|NM_001036468.1| Arabidopsis thaliana zinc ion binding A... 118 1e-025
gb|AV824278.1|AV824278 AV824278 RAFL6 Arabidopsis thaliana ... 111 2e-025
gb|T23011.1|T23011 5019 Lambda-PRL2 Arabidopsis thaliana cD... 117 2e-025
gb|CB257341.1|CB257341 32-E011583-027-006-P08-T7R MPIZ-ADIS... 117 2e-025
gb|CB254107.1|CB254107 79-E010698-019-002-N19-T7R MPIZ-ADIS... 117 2e-025
gb|AY072143.1| Arabidopsis thaliana At1g10200 mRNA sequence 100 2e-024
gb|AV831505.1|AV831505 AV831505 RAFL9 Arabidopsis thaliana ... 100 2e-024
gb|T42925.1|T42925 6188 Lambda-PRL2 Arabidopsis thaliana cD... 112 8e-024
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 66 1e-023
gb|BP851492.1|BP851492 BP851492 RAFL21 Arabidopsis thaliana... 111 1e-023
emb|BX817691.1|CNS0AE7D Arabidopsis thaliana Full-length cD... 66 2e-023
gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I1... 70 2e-022
gb|CF652509.1|CF652509 60-L020164-066-001-G16-SP6P MPIZ-ADI... 93 3e-022
gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M... 59 3e-022
emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome ... 59 1e-021
emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome... 68 1e-021
gb|BX841501.1|BX841501 BX841501 Arabidopsis thaliana Flower... 97 2e-021
>gb|AU238898.1|AU238898 AU238898 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-27-K11 5',
mRNA sequence
Length = 642
Score = 179 bits (386), Expect = 4e-044
Identities = 73/141 (51%), Positives = 86/141 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG + +YSSMD LYCK
Sbjct: 112 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 291
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLT 430
HFEQLFK +G++SKNF LTR PSKLSS FSGT DK A C+KT YP +T
Sbjct: 292 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 471
Query: 431 LXXXXYHKXXXKCSXXXXXLT 493
+ YHK +C+ LT
Sbjct: 472 MEGESYHKTCFRCTHSGCPLT 534
>gb|BT005586.1| Arabidopsis thaliana clone U50754 putative LIM-domain protein
(At2g45800) mRNA, complete cds
Length = 712
Score = 179 bits (386), Expect = 4e-044
Identities = 73/141 (51%), Positives = 86/141 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG + +YSSMD LYCK
Sbjct: 1 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 180
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLT 430
HFEQLFK +G++SKNF LTR PSKLSS FSGT DK A C+KT YP +T
Sbjct: 181 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 360
Query: 431 LXXXXYHKXXXKCSXXXXXLT 493
+ YHK +C+ LT
Sbjct: 361 MEGESYHKTCFRCTHSGCPLT 423
>dbj|AK118044.1| Arabidopsis thaliana At2g45800 mRNA for putative LIM-domain
protein, complete cds, clone: RAFL19-27-K11
Length = 991
Score = 179 bits (386), Expect = 4e-044
Identities = 73/141 (51%), Positives = 86/141 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG + +YSSMD LYCK
Sbjct: 112 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 291
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLT 430
HFEQLFK +G++SKNF LTR PSKLSS FSGT DK A C+KT YP +T
Sbjct: 292 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 471
Query: 431 LXXXXYHKXXXKCSXXXXXLT 493
+ YHK +C+ LT
Sbjct: 472 MEGESYHKTCFRCTHSGCPLT 534
>ref|NM_130143.2| Arabidopsis thaliana zinc ion binding AT2G45800 transcript variant
AT2G45800.1 mRNA, complete cds
Length = 1224
Score = 179 bits (386), Expect = 4e-044
Identities = 73/141 (51%), Positives = 86/141 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG + +YSSMD LYCK
Sbjct: 112 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 291
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLT 430
HFEQLFK +G++SKNF LTR PSKLSS FSGT DK A C+KT YP +T
Sbjct: 292 HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 471
Query: 431 LXXXXYHKXXXKCSXXXXXLT 493
+ YHK +C+ LT
Sbjct: 472 MEGESYHKTCFRCTHSGCPLT 534
>gb|BT022103.1| Arabidopsis thaliana At3g61230 mRNA, complete cds
Length = 710
Score = 179 bits (385), Expect = 6e-044
Identities = 70/140 (50%), Positives = 88/140 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+FTG DKC CDKT + +DL+T YHK+C HC G +C+YSSMD LYCKTH
Sbjct: 58 AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 237
Query: 254 FEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTL 433
FEQLFK +G+FSKNF + T+AP++LSS FSGT DK AAC+KT YP +T+
Sbjct: 238 FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 417
Query: 434 XXXXYHKXXXKCSXXXXXLT 493
YHK +C+ LT
Sbjct: 418 EGESYHKTCFRCAHSGCPLT 477
>ref|NM_115987.2| Arabidopsis thaliana zinc ion binding AT3G61230 mRNA, complete cds
Length = 1351
Score = 179 bits (385), Expect = 6e-044
Identities = 70/140 (50%), Positives = 88/140 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+FTG DKC CDKT + +DL+T YHK+C HC G +C+YSSMD LYCKTH
Sbjct: 101 AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 280
Query: 254 FEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTL 433
FEQLFK +G+FSKNF + T+AP++LSS FSGT DK AAC+KT YP +T+
Sbjct: 281 FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 460
Query: 434 XXXXYHKXXXKCSXXXXXLT 493
YHK +C+ LT
Sbjct: 461 EGESYHKTCFRCAHSGCPLT 520
>emb|BX825681.1|CNS0A6AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL56ZA06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 912
Score = 175 bits (376), Expect = 1e-042
Identities = 69/140 (49%), Positives = 87/140 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+FTG DKC C KT + +DL+T YHK+C HC G +C+YSSMD LYCKTH
Sbjct: 101 AFTGTTDKCKACYKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 280
Query: 254 FEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTL 433
FEQLFK +G+FSKNF + T+AP++LSS FSGT DK AAC+KT YP +T+
Sbjct: 281 FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 460
Query: 434 XXXXYHKXXXKCSXXXXXLT 493
YHK +C+ LT
Sbjct: 461 EGESYHKTCFRCAHSGCPLT 520
>emb|BX821642.1|CNS0A9BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL60ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 944
Score = 171 bits (367), Expect = 2e-041
Identities = 70/141 (49%), Positives = 85/141 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +DLLT YHK+C HCKG + +YSSMD LYCK
Sbjct: 55 MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 234
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLT 430
HFEQLFK +G++SKN LTR PSKLS+ FSGT +K A C+KT YP +T
Sbjct: 235 HFEQLFKESGNYSKNNQAGKTEKPNDHLTRTPSKLSTFFSGTQNKCATCKKTVYPLEKVT 414
Query: 431 LXXXXYHKXXXKCSXXXXXLT 493
+ YHK +C+ LT
Sbjct: 415 MEGERYHKTCFRCTHNGCPLT 477
>gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence
Length = 3229
Score = 125 bits (268), Expect(2) = 4e-041
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +D+L+ YHK+C HCKG M +YSSMD LYCKT
Sbjct: 2453 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 2632
Query: 251 HFEQLFKXTGSFSKNFTP 304
HFEQLFK +G+FSKNF P
Sbjct: 2633 HFEQLFKESGNFSKNFQP 2686
Score = 64.3 bits (134), Expect(2) = 4e-041
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2 / +2
Query: 317 SDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
++K LTR PSK+SS F GT DK AAC+KT YP + + +HK +C+ LT
Sbjct: 2693 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLT 2869
>ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G01780 mRNA, complete cds
Length = 765
Score = 125 bits (268), Expect(2) = 4e-041
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +D+L+ YHK+C HCKG M +YSSMD LYCKT
Sbjct: 148 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 327
Query: 251 HFEQLFKXTGSFSKNFTP 304
HFEQLFK +G+FSKNF P
Sbjct: 328 HFEQLFKESGNFSKNFQP 381
Score = 64.3 bits (134), Expect(2) = 4e-041
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2 / +1
Query: 317 SDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
++K LTR PSK+SS F GT DK AAC+KT YP + + +HK +C+ LT
Sbjct: 388 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLT 564
>emb|BX817923.1|CNS0AE65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL50ZE05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 931
Score = 123 bits (263), Expect(2) = 2e-040
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG DKC CDKT + +D+L+ YHK+C HCKG M +YSSMD LYC T
Sbjct: 149 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCNT 328
Query: 251 HFEQLFKXTGSFSKNFTP 304
HFEQLFK +G+FSKNF P
Sbjct: 329 HFEQLFKESGNFSKNFQP 382
Score = 64.3 bits (134), Expect(2) = 2e-040
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2 / +2
Query: 317 SDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
++K LTR PSK+SS F GT DK AAC+KT YP + + +HK +C+ LT
Sbjct: 389 TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLT 565
>ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.5 mRNA, complete cds
Length = 1046
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 242 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 421
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 422 HFEQLFKESGSFNKNFQSPAKSADK 496
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 509 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 649
>ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.3 mRNA, complete cds
Length = 1042
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 238 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 417
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 418 HFEQLFKESGSFNKNFQSPAKSADK 492
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 505 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 645
>ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.4 mRNA, complete cds
Length = 1030
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 226 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 405
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 406 HFEQLFKESGSFNKNFQSPAKSADK 480
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 493 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 633
>ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.1 mRNA, complete cds
Length = 1010
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 207 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 386
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 387 HFEQLFKESGSFNKNFQSPAKSADK 461
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 474 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 614
>gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, complete sequence
Length = 991
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 207 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 386
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 387 HFEQLFKESGSFNKNFQSPAKSADK 461
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 474 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 614
>gb|AY063924.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
mRNA, complete cds
Length = 977
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 177 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 356
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 357 HFEQLFKESGSFNKNFQSPAKSADK 431
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 444 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 584
>ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
AT3G55770.2 mRNA, complete cds
Length = 943
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 139 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 318
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 319 HFEQLFKESGSFNKNFQSPAKSADK 393
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 406 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 546
>emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB6ZE02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 935
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 166 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 345
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 346 HFEQLFKESGSFNKNFQSPAKSADK 420
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 433 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 573
>emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH38ZH03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 883
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 169 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 348
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 349 HFEQLFKESGSFNKNFQSPAKSADK 423
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 436 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 576
>emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription factor L2
Length = 882
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 76 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 255
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 256 HFEQLFKESGSFNKNFQSPAKSADK 330
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 343 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 483
>emb|CS137644.1| Sequence 615 from Patent WO2005047516
Length = 861
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 76 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 255
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 256 HFEQLFKESGSFNKNFQSPAKSADK 330
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 343 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 483
>gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 750
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 126 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 305
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 306 HFEQLFKESGSFNKNFQSPAKSADK 380
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 393 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 533
>gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA 5' similar to transcription
factor l2, mRNA sequence
Length = 709
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 188 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 367
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 368 HFEQLFKESGSFNKNFQSPAKSADK 442
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 455 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 595
>gb|BP561356.1|BP561356 BP561356 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-K09 5',
mRNA sequence
Length = 659
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 179 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 358
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 359 HFEQLFKESGSFNKNFQSPAKSADK 433
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 446 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 586
>gb|AY091249.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
mRNA, complete cds
Length = 631
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 1 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 180
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 181 HFEQLFKESGSFNKNFQSPAKSADK 255
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 268 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 408
>gb|AV552065.1|AV552065 AV552065 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ20a03R 5', mRNA sequence
Length = 571
Score = 117 bits (250), Expect(2) = 1e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 158 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 337
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 338 HFEQLFKESGSFNKNFQSPAKSADK 412
Score = 60.6 bits (126), Expect(2) = 1e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 425 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 565
>gb|AF370574.1|AF370574 Arabidopsis thaliana transcription factor L2 (F1I16_180) mRNA,
complete cds
Length = 694
Score = 115 bits (245), Expect(2) = 7e-037
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
SFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK H
Sbjct: 3 SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 182
Query: 254 FEQLFKXTGSFSKNFTPXXXSSDK 325
FEQLFK +GSF+KNF S+DK
Sbjct: 183 FEQLFKESGSFNKNFQSPAKSADK 254
Score = 60.6 bits (126), Expect(2) = 7e-037
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C KT YP +T+ YHK KCS
Sbjct: 267 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 407
>gb|CB254686.1|CB254686 62-E018429-019-008-L15-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768L158Q 5-PRIME, mRNA sequence
Length = 558
Score = 117 bits (250), Expect(2) = 7e-037
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 109 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 288
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 289 HFEQLFKESGSFNKNFQSPAKSADK 363
Score = 58.3 bits (121), Expect(2) = 7e-037
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
LTR PS+++ FSGT +K A C T YP +T+ YHK KCS
Sbjct: 376 LTRTPSRVAGRFSGTQEKCATCSXTVYPIAKVTVESQTYHKSCFKCS 516
>gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
Length = 948
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 173 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 352
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 353 PHFEQLFKESGSFSKNF 403
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 446 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 586
>ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G39900 mRNA, complete cds
Length = 948
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 173 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 352
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 353 PHFEQLFKESGSFSKNF 403
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 446 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 586
>emb|CS137532.1| Sequence 503 from Patent WO2005047516
Length = 928
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 190 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 369
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 370 PHFEQLFKESGSFSKNF 420
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 463 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 603
>emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL12ZB11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 904
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 127 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 306
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 307 PHFEQLFKESGSFSKNF 357
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 400 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 540
>emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL12ZH07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 892
Score = 111 bits (237), Expect(2) = 1e-035
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 127 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 306
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 307 PHFEQLFKESGSFSKNF 357
Score = 60.2 bits (125), Expect(2) = 1e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 400 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 540
>gb|AV553161.1|AV553161 AV553161 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55d10R 5', mRNA sequence
Length = 568
Score = 117 bits (250), Expect(2) = 2e-035
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 177 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 356
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 357 HFEQLFKESGSFNKNFQSPAKSADK 431
Score = 53.8 bits (111), Expect(2) = 2e-035
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHK 454
LTR PS+++ FSGT +K A C KT YP +T+ YHK
Sbjct: 444 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHK 566
>emb|AX412775.1| Sequence 539 from Patent WO0222675
Length = 603
Score = 109 bits (232), Expect(2) = 6e-035
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 1 MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 180
Query: 251 HFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 181 HFEQLFKESGSFSKNF 228
Score = 60.2 bits (125), Expect(2) = 6e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 271 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 411
>gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
Length = 603
Score = 109 bits (232), Expect(2) = 6e-035
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 1 MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 180
Query: 251 HFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 181 HFEQLFKESGSFSKNF 228
Score = 60.2 bits (125), Expect(2) = 6e-035
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT YP +T+ YHK KCS
Sbjct: 271 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCS 411
>gb|AV554564.1|AV554564 AV554564 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ95b04R 5', mRNA sequence
Length = 525
Score = 117 bits (250), Expect(2) = 8e-035
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 138 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 317
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 318 HFEQLFKESGSFNKNFQSPAKSADK 392
Score = 51.5 bits (106), Expect(2) = 8e-035
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYH 451
LTR PS+++ FSGT +K A C KT YP +T+ YH
Sbjct: 405 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 524
>gb|BE038914.1|BE038914 AB05H02 AB Arabidopsis thaliana cDNA 5' similar to lim-domain
protein, mRNA sequence
Length = 716
Score = 111 bits (237), Expect(2) = 1e-034
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2 / +1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK C HCK + +YSSM+ +YC+
Sbjct: 91 TMSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCR 270
Query: 248 THFEQLFKXTGSFSKNF 298
HFEQLFK +GSFSKNF
Sbjct: 271 PHFEQLFKESGSFSKNF 321
Score = 56.5 bits (117), Expect(2) = 1e-034
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
L R PS+L+ FSGT DK A C KT Y +T+ YHK KCS
Sbjct: 364 LNRTPSRLAGMFSGTQDKCATCTKTVYAIEKVTVESQCYHKSCFKCS 504
>gb|CF652626.1|CF652626 67-L020164-066-001-E18-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001E181Q 5-PRIME, mRNA sequence
Length = 382
Score = 113 bits (241), Expect(2) = 1e-032
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
SFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK H
Sbjct: 1 SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 180
Query: 254 FEQLFKXTGSFSKNFTPXXXSSDK 325
FEQLFK +GSF+KNF S+D+
Sbjct: 181 FEQLFKESGSFNKNFQSPAKSADE 252
Score = 47.8 bits (98), Expect(2) = 1e-032
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXY 448
LTR PS+++ FSGT +K A C KT YP +T+ Y
Sbjct: 265 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEQVTVESQTY 381
>gb|BP562171.1|BP562171 BP562171 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-58-M08 5',
mRNA sequence
Length = 551
Score = 117 bits (250), Expect(2) = 2e-032
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 194 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 373
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 374 HFEQLFKESGSFNKNFQSPAKSADK 448
Score = 43.7 bits (89), Expect(2) = 2e-032
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR PS+++ FSGT +K A C KT YP
Sbjct: 461 LTRTPSRVAGRFSGTQEKCATCSKTVYP 544
>gb|CB264898.1|CB264898 24-E014661-035-002-P06-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000P062Q 5-PRIME, mRNA sequence
Length = 525
Score = 117 bits (250), Expect(2) = 1e-031
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 169 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 348
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 349 HFEQLFKESGSFNKNFQSPAKSADK 423
Score = 40.9 bits (83), Expect(2) = 1e-031
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR PS+++ FSGT + A C KT YP
Sbjct: 436 LTRTPSRVAGRFSGTQETCATCSKTVYP 519
>gb|CK119661.1|CK119661 211c15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C15211
5-PRIME, mRNA sequence
Length = 521
Score = 117 bits (250), Expect(2) = 1e-031
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 161 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 340
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK +GSF+KNF S+DK
Sbjct: 341 HFEQLFKESGSFNKNFQSPAKSADK 415
Score = 40.5 bits (82), Expect(2) = 1e-031
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR PS+++ FSGT + A C KT YP
Sbjct: 428 LTRTPSRVAGRFSGTQXECATCSKTVYP 511
>gb|AV554173.1|AV554173 AV554173 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ83b06R 5', mRNA sequence
Length = 476
Score = 115 bits (246), Expect(2) = 1e-030
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
MSFTG Q KC C+KT + ++LL+ YHK+C HCK + SYSSM+ LYCK
Sbjct: 64 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 243
Query: 251 HFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLF+ +GSF+KNF S+DK
Sbjct: 244 HFEQLFEESGSFNKNFQSPAKSADK 318
Score = 39.1 bits (79), Expect(2) = 1e-030
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTL 433
LTR PS+++ SGT K C KT YP +T+
Sbjct: 331 LTRTPSRVAGRVSGTQGKCGTCSKTVYPIEKVTV 432
>emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB71ZB02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1203
Score = 63.8 bits (133), Expect(3) = 2e-028
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 206 MCSYSSMDXXLYCKTHFEQLFKXTGSFSKNFTPXXXSSDK 325
+ SYSSM+ LYCK HFEQLFK +GSF+KNF S+DK
Sbjct: 350 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQSPAKSADK 469
Score = 57.4 bits (119), Expect(3) = 2e-028
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCK 193
MSFTG Q KC C+KT + ++LL+ YHK+C HCK
Sbjct: 214 MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCK 336
Score = 43.7 bits (89), Expect(3) = 2e-028
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR PS+++ FSGT +K A C KT YP
Sbjct: 482 LTRTPSRVAGRFSGTQEKCATCSKTVYP 565
>ref|NM_100894.2| Arabidopsis thaliana transcription factor/ zinc ion binding
AT1G10200 mRNA, complete cds
Length = 944
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D LT +YHK C HCKG + +Y+S + LYC+
Sbjct: 85 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 264
Query: 251 HFEQLFKXTGSFSKNF 298
HF+Q FK TGS K+F
Sbjct: 265 HFDQNFKRTGSLEKSF 312
Score = 46.4 bits (95), Expect(2) = 3e-028
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
A +K+S+ F GT +K C KT YP +++ YHK KC+
Sbjct: 367 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCT 498
>gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, complete sequence
Length = 886
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D LT +YHK C HCKG + +Y+S + LYC+
Sbjct: 85 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 264
Query: 251 HFEQLFKXTGSFSKNF 298
HF+Q FK TGS K+F
Sbjct: 265 HFDQNFKRTGSLEKSF 312
Score = 46.4 bits (95), Expect(2) = 3e-028
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
A +K+S+ F GT +K C KT YP +++ YHK KC+
Sbjct: 367 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCT 498
>gb|AF370569.1|AF370569 Arabidopsis thaliana similar to transcription factor SF3
(pir|IS37656) (F14N23.8) mRNA, complete cds
Length = 610
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D LT +YHK C HCKG + +Y+S + LYC+
Sbjct: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 180
Query: 251 HFEQLFKXTGSFSKNF 298
HF+Q FK TGS K+F
Sbjct: 181 HFDQNFKRTGSLEKSF 228
Score = 46.4 bits (95), Expect(2) = 3e-028
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2 / +1
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
A +K+S+ F GT +K C KT YP +++ YHK KC+
Sbjct: 283 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCT 414
>gb|CB263957.1|CB263957 02-E011587-008-014-D07-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D0714Q 5-PRIME, mRNA sequence
Length = 592
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D LT +YHK C HCKG + +Y+S + LYC+
Sbjct: 29 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 208
Query: 251 HFEQLFKXTGSFSKNF 298
HF+Q FK TGS K+F
Sbjct: 209 HFDQNFKRTGSLEKSF 256
Score = 46.4 bits (95), Expect(2) = 3e-028
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2 / +2
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
A +K+S+ F GT +K C KT YP +++ YHK KC+
Sbjct: 311 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCT 442
>gb|CB263958.1|CB263958 02-E011587-008-014-D07-rev MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D0714Q 5-PRIME, mRNA sequence
Length = 592
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +2 / +2
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D LT +YHK C HCKG + +Y+S + LYC+
Sbjct: 29 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 208
Query: 251 HFEQLFKXTGSFSKNF 298
HF+Q FK TGS K+F
Sbjct: 209 HFDQNFKRTGSLEKSF 256
Score = 46.4 bits (95), Expect(2) = 3e-028
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2 / +2
Query: 341 APSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
A +K+S+ F GT +K C KT YP +++ YHK KC+
Sbjct: 311 AGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCT 442
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 570,236,601
Number of Sequences: 1013581
Number of extensions: 4341242
Number of successful extensions: 78610
Number of sequences better than 1.0e-020: 84
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 27307160760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)