TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ2b01.yg.2.1
(541 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPON... 164 2e-044
ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPON... 164 2e-044
ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPON... 164 2e-044
emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for puta... 164 2e-044
emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for puta... 164 2e-044
emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for puta... 164 2e-044
dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidin... 164 2e-044
dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin rec... 163 4e-044
dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin rec... 163 4e-044
emb|AX537479.1| Sequence 5 from Patent EP1241182 163 4e-044
emb|CS063639.1| Sequence 1 from Patent EP1522586 163 4e-044
dbj|DD159606.1| Transformed Cell co-expressing both of cyto... 163 4e-044
emb|AX505345.1| Sequence 40 from Patent WO0216655 164 2e-039
ref|NM_102494.2| Arabidopsis thaliana AHK3 (ARABIDOPSIS HIS... 155 8e-038
emb|AX507714.1| Sequence 2409 from Patent WO0216655 155 8e-038
dbj|AB046870.1| Arabidopsis thaliana AHK3 mRNA for histidin... 155 8e-038
emb|AX537477.1| Sequence 3 from Patent EP1241182 155 8e-038
emb|CS063643.1| Sequence 5 from Patent EP1522586 155 8e-038
dbj|DD159608.1| Transformed Cell co-expressing both of cyto... 155 8e-038
gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K... 86 3e-036
gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis tha... 79 4e-030
ref|NM_122966.2| Arabidopsis thaliana AHK2 (ARABIDOPSIS HIS... 126 7e-030
dbj|AB046869.1| Arabidopsis thaliana AHK2 mRNA for histidin... 126 7e-030
emb|AX537475.1| Sequence 1 from Patent EP1241182 126 7e-030
emb|CS063641.1| Sequence 3 from Patent EP1522586 126 7e-030
dbj|DD159607.1| Transformed Cell co-expressing both of cyto... 126 7e-030
gb|BT002530.1| Arabidopsis thaliana histidine kinase-like p... 126 7e-030
gb|BT008407.1| Arabidopsis thaliana At5g35750 gene, complet... 126 7e-030
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 79 3e-028
dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosom... 69 2e-024
>ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.2 mRNA, complete cds
Length = 3658
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1636 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1815
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1816 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1935
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -3
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1931 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1752
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1751 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1635
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1999 SYNTLSGYEAADGRNSWDSF 2058
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2096 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2004
>ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.3 mRNA, complete cds
Length = 3654
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1632 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1811
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1812 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1931
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -3
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1927 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1748
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1747 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1631
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1995 SYNTLSGYEAADGRNSWDSF 2054
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2092 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2000
>ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.1 mRNA, complete cds
Length = 3637
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1635 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1814
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1815 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1934
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -1
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1930 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1751
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1750 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1634
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1998 SYNTLSGYEAADGRNSWDSF 2057
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -1
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2095 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2003
>emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 1
Length = 3620
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1640 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1819
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1820 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1939
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -3
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1935 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1756
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1755 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1639
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 2003 SYNTLSGYEAADGRNSWDSF 2062
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2100 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2008
>emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 3
Length = 3612
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1632 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1811
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1812 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1931
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -3
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1927 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1748
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1747 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1631
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1995 SYNTLSGYEAADGRNSWDSF 2054
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2092 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2000
>emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 2
Length = 3503
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1523 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1702
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1703 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1822
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -3
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1818 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1639
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1638 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1522
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1886 SYNTLSGYEAADGRNSWDSF 1945
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -3
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 1983 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1891
>dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidine kinase, complete cds
Length = 3243
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1570 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 1749
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1750 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1869
Score = 118 bits (252), Expect(2) = 4e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1865 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 1686
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1685 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1569
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1933 SYNTLSGYEAADGRNSWDSF 1992
Score = 28.1 bits (55), Expect(2) = 4e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2030 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1938
>dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1b, complete cds
Length = 3694
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1638 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 1817
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1818 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1937
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -1
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1933 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMPLFLD 1754
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1753 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1637
Score = 36.3 bits (73), Expect(2) = 4e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 2001 SYNTLSGYEAADGRNSWDSF 2060
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -1
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2098 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 2006
>dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1a, complete cds
Length = 3649
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1601 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 1780
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1781 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1900
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1896 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMPLFLD 1717
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1716 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1600
Score = 36.3 bits (73), Expect(2) = 4e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1964 SYNTLSGYEAADGRNSWDSF 2023
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 2061 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1969
>emb|AX537479.1| Sequence 5 from Patent EP1241182
Length = 3174
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1501 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 1680
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1681 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1800
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1796 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMPLFLD 1617
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1616 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1500
Score = 36.3 bits (73), Expect(2) = 4e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1864 SYNTLSGYEAADGRNSWDSF 1923
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 1961 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1869
>emb|CS063639.1| Sequence 1 from Patent EP1522586
Length = 3174
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1501 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 1680
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1681 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1800
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1796 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMPLFLD 1617
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1616 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1500
Score = 36.3 bits (73), Expect(2) = 4e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1864 SYNTLSGYEAADGRNSWDSF 1923
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 1961 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1869
>dbj|DD159606.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3174
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 1501 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKGIELAVFVSDKVPEIVK 1680
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 1681 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 1800
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 1796 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMPLFLD 1617
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 1616 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 1500
Score = 36.3 bits (73), Expect(2) = 4e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 1864 SYNTLSGYEAADGRNSWDSF 1923
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 472 SSKRDSLSERSIXKYCQLFRXXAASNPLRVL 380
+S D SE QLFR AAS PL VL
Sbjct: 1961 NSDNDCSSETKCLNESQLFRPSAAS*PLNVL 1869
>emb|AX505345.1| Sequence 40 from Patent WO0216655
Length = 1803
Score = 164 bits (353), Expect = 2e-039
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IELAVFV D VP+ V
Sbjct: 232 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVK 411
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEA 311
GD RFRQI+ NLVGN+VKFTE+GH+FV+V LA+ S E+
Sbjct: 412 GDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKDES 531
Score = 118 bits (252), Expect = 1e-025
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = -1 / -2
Query: 307 SIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRD 128
S F+ SA+ T T P SVNLT PT+F+ IC NL SP T GTLS T TASSM D
Sbjct: 527 SSFDCSARWTLTKICPFSVNLTEFPTRFMIICLNLPESPLTISGTLSETKTASSMLLFLD 348
Query: 127 FEENKEITSSMRERRSKGTASSSNFPASIFARSRTSFXN 11
EN+E TSS ER S GT S+S+FPASI ARSRTSF N
Sbjct: 347 SSENRERTSSNIERISNGTDSNSSFPASILARSRTSFIN 231
>ref|NM_102494.2| Arabidopsis thaliana AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) AT1G27320
(AHK3) mRNA, complete cds
Length = 3283
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1504 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1683
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1684 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1785
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1813 TASSPESTLSGLPVADRQRSWENF 1884
>emb|AX507714.1| Sequence 2409 from Patent WO0216655
Length = 3279
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1600 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1779
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1780 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1881
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1909 TASSPESTLSGLPVADRQRSWENF 1980
>dbj|AB046870.1| Arabidopsis thaliana AHK3 mRNA for histidine kinase, complete cds
Length = 3111
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1504 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1683
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1684 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1785
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1813 TASSPESTLSGLPVADRQRSWENF 1884
>emb|AX537477.1| Sequence 3 from Patent EP1241182
Length = 3111
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1504 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1683
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1684 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1785
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1813 TASSPESTLSGLPVADRQRSWENF 1884
>emb|CS063643.1| Sequence 5 from Patent EP1522586
Length = 3111
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1504 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1683
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1684 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1785
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1813 TASSPESTLSGLPVADRQRSWENF 1884
>dbj|DD159608.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3111
Score = 155 bits (333), Expect(2) = 8e-038
Identities = 63/94 (67%), Positives = 81/94 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +ELAV++ D VP ++
Sbjct: 1504 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLI 1683
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDP RFRQILTNL+GN++KFTE+GH+FV V L D
Sbjct: 1684 GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVD 1785
Score = 23.5 bits (45), Expect(2) = 8e-038
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 1813 TASSPESTLSGLPVADRQRSWENF 1884
>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete
sequence
Length = 73009
Score = 85.8 bits (181), Expect(4) = 3e-036
Identities = 35/48 (72%), Positives = 44/48 (91%)
Frame = +3 / -1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLDRAKIEAGKLELE+VPFD+RS++DDV+SLFS +SR K IE++
Sbjct: 11452 LINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIEVS 11309
Score = 53.8 bits (111), Expect(4) = 3e-036
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAVFV D VP+ V GD RFRQI+ NLVGN+VK
Sbjct: 11239 QLAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVK 11138
Score = 36.3 bits (73), Expect(4) = 3e-036
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 375 AFNTLSGFEAAXXRNSWQYF 434
++NTLSG+EAA RNSW F
Sbjct: 10928 SYNTLSGYEAADGRNSWDSF 10869
Score = 33.1 bits (66), Expect(4) = 3e-036
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 246 KFTERGHVFVRVCLADNSNMEA 311
+FTE+GH+FV+V LA+ S E+
Sbjct: 11057 QFTEKGHIFVKVHLAEQSKDES 10992
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I,
complete sequence
Length = 99690
Score = 79.0 bits (166), Expect(4) = 4e-030
Identities = 32/51 (62%), Positives = 44/51 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFV 164
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +E+ ++
Sbjct: 34042 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVEVTYYM 34194
Score = 57.0 bits (118), Expect(4) = 4e-030
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / +2
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV++ D VP ++GDP RFRQILTNL+GN++K
Sbjct: 34265 QLAVYISDRVPDMLIGDPGRFRQILTNLMGNSIK 34366
Score = 28.6 bits (56), Expect(4) = 4e-030
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 246 KFTERGHVFVRVCLAD 293
+FTE+GH+FV V L D
Sbjct: 34450 QFTEKGHIFVTVHLVD 34497
Score = 23.5 bits (45), Expect(4) = 4e-030
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3 / +1
Query: 363 TTNGAFNTLSGFEAAXXRNSWQYF 434
T + +TLSG A + SW+ F
Sbjct: 34525 TASSPESTLSGLPVADRQRSWENF 34596
>ref|NM_122966.2| Arabidopsis thaliana AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) AT5G35750
(AHK2) mRNA, complete cds
Length = 3903
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 1915 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 2094
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 2095 GDPSRFRQIITNLVGNSIKFTQ 2160
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 2161 ERGHIFISVHLAD 2199
>dbj|AB046869.1| Arabidopsis thaliana AHK2 mRNA for histidine kinase, complete cds
Length = 3531
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 1915 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 2094
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 2095 GDPSRFRQIITNLVGNSIKFTQ 2160
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 2161 ERGHIFISVHLAD 2199
>emb|AX537475.1| Sequence 1 from Patent EP1241182
Length = 3531
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 1915 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 2094
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 2095 GDPSRFRQIITNLVGNSIKFTQ 2160
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 2161 ERGHIFISVHLAD 2199
>emb|CS063641.1| Sequence 3 from Patent EP1522586
Length = 3531
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 1915 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 2094
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 2095 GDPSRFRQIITNLVGNSIKFTQ 2160
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 2161 ERGHIFISVHLAD 2199
>dbj|DD159607.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3531
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 1915 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 2094
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 2095 GDPSRFRQIITNLVGNSIKFTQ 2160
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 2161 ERGHIFISVHLAD 2199
>gb|BT002530.1| Arabidopsis thaliana histidine kinase-like protein (At5g35750)
mRNA, complete cds
Length = 2347
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 363 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 542
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 543 GDPSRFRQIITNLVGNSIKFTQ 608
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 609 ERGHIFISVHLAD 647
>gb|BT008407.1| Arabidopsis thaliana At5g35750 gene, complete cds
Length = 1959
Score = 126 bits (270), Expect(2) = 7e-030
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IELAV+V VP V+
Sbjct: 343 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVV 522
Query: 192 GDPWRFRQILTNLVGNAVKFTE 257
GDP RFRQI+TNLVGN++KFT+
Sbjct: 523 GDPSRFRQIITNLVGNSIKFTQ 588
Score = 25.8 bits (50), Expect(2) = 7e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 589 ERGHIFISVHLAD 627
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 79.0 bits (166), Expect(3) = 3e-028
Identities = 32/51 (62%), Positives = 44/51 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFV 164
L N+VLD+AKIE+GKLELE V FDLR ++DDV+SLFSSKS++K +E+ ++
Sbjct: 9498940 LINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVEVTYYM 9499092
Score = 57.0 bits (118), Expect(3) = 3e-028
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / +2
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV++ D VP ++GDP RFRQILTNL+GN++K
Sbjct: 9499163 QLAVYISDRVPDMLIGDPGRFRQILTNLMGNSIK 9499264
Score = 28.6 bits (56), Expect(3) = 3e-028
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 246 KFTERGHVFVRVCLAD 293
+FTE+GH+FV V L D
Sbjct: 9499348 QFTEKGHIFVTVHLVD 9499395
>dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXH1
Length = 87210
Score = 69.3 bits (145), Expect(3) = 2e-024
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +3 / -1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEL 152
L N+VLD+AKIE+G+LELE VPFD+R ++D+V SL S K+ EK IE+
Sbjct: 59613 LINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIEV 59473
Score = 56.5 bits (117), Expect(3) = 2e-024
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 144 IELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
++LAV+V VP V+GDP RFRQI+TNLVGN++K
Sbjct: 59387 LQLAVYVSSQVPDVVVGDPSRFRQIITNLVGNSIK 59283
Score = 25.8 bits (50), Expect(3) = 2e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 255 ERGHVFVRVCLAD 293
ERGH+F+ V LAD
Sbjct: 59187 ERGHIFISVHLAD 59149
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 960,668,603
Number of Sequences: 1013581
Number of extensions: 12888958
Number of successful extensions: 194750
Number of sequences better than 1.0e-020: 32
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 30656933540
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)