TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAM14e11.yg.2.1
(197 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 136 3e-031
gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 136 3e-031
gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 136 3e-031
gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F... 136 3e-031
ref|NM_100370.2| Arabidopsis thaliana transferase, transfer... 136 3e-031
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 136 3e-031
gb|CB257846.1|CB257846 44-E011804-014-004-H12-T7R MPIZ-ADIS... 133 2e-030
gb|AV529117.1|AV529117 AV529117 Arabidopsis thaliana aboveg... 133 2e-030
gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 133 2e-030
gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosph... 133 2e-030
gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosph... 133 2e-030
emb|CQ805578.1| Sequence 1989 from Patent WO2004035798 133 2e-030
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 133 2e-030
ref|NM_122035.1| Arabidopsis thaliana transferase, transfer... 133 2e-030
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 133 2e-030
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 126 3e-028
emb|CQ805456.1| Sequence 1867 from Patent WO2004035798 126 3e-028
dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 3e-028
emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome... 126 3e-028
emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosom... 126 3e-028
dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 3e-028
dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 3e-028
dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 3e-028
ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT... 126 3e-028
ref|NM_117080.4| Arabidopsis thaliana transferase, transfer... 126 3e-028
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 126 3e-028
emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome ... 79 1e-023
emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5... 79 2e-023
ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G1... 79 2e-023
gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA... 79 2e-023
gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene... 79 2e-023
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / -3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 1394593 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 1394414
Query: 16 EQWGL 2
EQWGL
Sbjct: 1394413 EQWGL 1394399
>gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3471
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 1108 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 1287
Query: 16 EQWGL 2
EQWGL
Sbjct: 1288 EQWGL 1302
>gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3189
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 1000 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 1179
Query: 16 EQWGL 2
EQWGL
Sbjct: 1180 EQWGL 1194
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
Length = 89713
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 28077 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 28256
Query: 16 EQWGL 2
EQWGL
Sbjct: 28257 EQWGL 28271
>ref|NM_100370.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT1G04920 mRNA, complete cds
Length = 3469
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 1108 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 1287
Query: 16 EQWGL 2
EQWGL
Sbjct: 1288 EQWGL 1302
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 136 bits (291), Expect = 3e-031
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -2 / -3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQ+LKQGR SKE+I+STYKI RRIE EEL+LDA+ELVITSTRQEID
Sbjct: 1394517 PMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEID 1394338
Query: 16 EQWGL 2
EQWGL
Sbjct: 1394337 EQWGL 1394323
>gb|CB257846.1|CB257846 44-E011804-014-004-H12-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771H124Q 5-PRIME, mRNA sequence
Length = 625
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 121 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 300
Query: 16 EQWGL 2
EQW L
Sbjct: 301 EQWRL 315
>gb|AV529117.1|AV529117 AV529117 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27g06R 5', mRNA
sequence
Length = 539
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 293 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 472
Query: 16 EQWGL 2
EQW L
Sbjct: 473 EQWRL 487
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24
Length = 101458
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 52530 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 52351
Query: 16 EQWGL 2
EQW L
Sbjct: 52350 EQWRL 52336
>gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3494
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 1063 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 1242
Query: 16 EQWGL 2
EQW L
Sbjct: 1243 EQWRL 1257
>gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3163
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 997 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 1176
Query: 16 EQWGL 2
EQW L
Sbjct: 1177 EQWRL 1191
>emb|CQ805578.1| Sequence 1989 from Patent WO2004035798
Length = 3132
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 997 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 1176
Query: 16 EQWGL 2
EQW L
Sbjct: 1177 EQWRL 1191
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 6562453 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 6562274
Query: 16 EQWGL 2
EQW L
Sbjct: 6562273 EQWRL 6562259
>ref|NM_122035.1| Arabidopsis thaliana transferase, transferring glycosyl groups
AT5G20280 mRNA, complete cds
Length = 3478
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 1063 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 1242
Query: 16 EQWGL 2
EQW L
Sbjct: 1243 EQWRL 1257
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 133 bits (286), Expect = 2e-030
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+LTGHSLGR+KLEQ+L+QGR+SKEEI+STYKIMRRIEGEEL+LD SE+VITSTRQEID
Sbjct: 6848129 PMLLTGHSLGRDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEID 6847950
Query: 16 EQWGL 2
EQW L
Sbjct: 6847949 EQWRL 6847935
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 2229392 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 2229571
Query: 16 EQWGL 2
QWGL
Sbjct: 2229572 AQWGL 2229586
>emb|CQ805456.1| Sequence 1867 from Patent WO2004035798
Length = 3252
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1159 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1338
Query: 16 EQWGL 2
QWGL
Sbjct: 1339 AQWGL 1353
>dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-62-A14
Length = 3438
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1213 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1392
Query: 16 EQWGL 2
QWGL
Sbjct: 1393 AQWGL 1407
>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
Length = 85907
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 43538 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 43717
Query: 16 EQWGL 2
QWGL
Sbjct: 43718 AQWGL 43732
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
Length = 198005
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 141899 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 142078
Query: 16 EQWGL 2
QWGL
Sbjct: 142079 AQWGL 142093
>dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL21-92-G10
Length = 3462
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1224 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1403
Query: 16 EQWGL 2
QWGL
Sbjct: 1404 AQWGL 1418
>dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-49-M07
Length = 3438
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1213 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1392
Query: 16 EQWGL 2
QWGL
Sbjct: 1393 AQWGL 1407
>dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-83-J09
Length = 3438
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1213 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1392
Query: 16 EQWGL 2
QWGL
Sbjct: 1393 AQWGL 1407
>ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT4G10120 transcript variant
AT4G10120.2 mRNA, complete cds
Length = 3468
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1224 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1403
Query: 16 EQWGL 2
QWGL
Sbjct: 1404 AQWGL 1418
>ref|NM_117080.4| Arabidopsis thaliana transferase, transferring glycosyl groups
AT4G10120 transcript variant AT4G10120.1 mRNA, complete
cds
Length = 3457
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 1213 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 1392
Query: 16 EQWGL 2
QWGL
Sbjct: 1393 AQWGL 1407
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 126 bits (269), Expect = 3e-028
Identities = 50/65 (76%), Positives = 60/65 (92%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNK EQ+L+QGR+++E+ID TYKIMRRIE EE +LDA+E+V+TSTRQEID
Sbjct: 6316661 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 6316840
Query: 16 EQWGL 2
QWGL
Sbjct: 6316841 AQWGL 6316855
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA
project)
Length = 110992
Score = 79.0 bits (166), Expect(2) = 1e-023
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 124 KEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGL 2
KEEI+S YKI RRIE EEL LDASE+VITSTRQE+DEQW L
Sbjct: 661 KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRL 783
Score = 51.0 bits (105), Expect(2) = 1e-023
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKE 119
PMV TGHSLGR+KLEQ+LKQGR +E
Sbjct: 592 PMVFTGHSLGRDKLEQLLKQGRPKEE 669
>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
Length = 96379
Score = 79.0 bits (166), Expect(2) = 2e-023
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2 / +3
Query: 124 KEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGL 2
KEEI+S YKI RRIE EEL LDASE+VITSTRQE+DEQW L
Sbjct: 89040 KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRL 89162
Score = 51.0 bits (105), Expect(2) = 2e-023
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKE 119
PMV TGHSLGR+KLEQ+LKQGR +E
Sbjct: 88971 PMVFTGHSLGRDKLEQLLKQGRPKEE 89048
>ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G11110 mRNA, complete cds
Length = 3576
Score = 79.0 bits (166), Expect(2) = 2e-023
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2 / +3
Query: 124 KEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGL 2
KEEI+S YKI RRIE EEL LDASE+VITSTRQE+DEQW L
Sbjct: 1284 KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRL 1406
Score = 51.0 bits (105), Expect(2) = 2e-023
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKE 119
PMV TGHSLGR+KLEQ+LKQGR +E
Sbjct: 1215 PMVFTGHSLGRDKLEQLLKQGRPKEE 1292
>gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA, complete cds
Length = 2803
Score = 79.0 bits (166), Expect(2) = 2e-023
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 124 KEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGL 2
KEEI+S YKI RRIE EEL LDASE+VITSTRQE+DEQW L
Sbjct: 640 KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRL 762
Score = 51.0 bits (105), Expect(2) = 2e-023
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKE 119
PMV TGHSLGR+KLEQ+LKQGR +E
Sbjct: 571 PMVFTGHSLGRDKLEQLLKQGRPKEE 648
>gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene, complete cds
Length = 2685
Score = 79.0 bits (166), Expect(2) = 2e-023
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 124 KEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGL 2
KEEI+S YKI RRIE EEL LDASE+VITSTRQE+DEQW L
Sbjct: 625 KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRL 747
Score = 51.0 bits (105), Expect(2) = 2e-023
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKE 119
PMV TGHSLGR+KLEQ+LKQGR +E
Sbjct: 556 PMVFTGHSLGRDKLEQLLKQGRPKEE 633
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 400,179,952
Number of Sequences: 1013581
Number of extensions: 4398940
Number of successful extensions: 338717
Number of sequences better than 1.0e-020: 37
length of database: 302,980,290
effective HSP length: 49
effective length of database: 253,314,821
effective search space used: 4053037136
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)