TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF1g01.yg.2.1
(335 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 188 5e-047
gb|AV831087.1|AV831087 AV831087 RAFL9 Arabidopsis thaliana ... 177 8e-044
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 177 8e-044
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 173 2e-042
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 173 2e-042
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 173 2e-042
emb|AX651854.1| Sequence 720 from Patent WO03000898 172 3e-042
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 172 3e-042
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 172 4e-042
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 172 4e-042
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 172 4e-042
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 172 4e-042
emb|AX506240.1| Sequence 935 from Patent WO0216655 170 1e-041
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 170 1e-041
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 168 6e-041
emb|AX059538.1| Sequence 271 from Patent WO0055325 168 6e-041
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 168 6e-041
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 168 6e-041
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 168 6e-041
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 168 6e-041
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 168 6e-041
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 166 2e-040
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 165 6e-040
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 164 8e-040
emb|AL094620.1|CNS00XA6 Arabidopsis thaliana genome survey ... 164 1e-039
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 111 1e-038
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 111 3e-038
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 109 9e-038
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 109 1e-037
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 109 1e-037
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 79 3e-037
gb|CL509491.1|CL509491 SAIL_812_E05.v2 SAIL Collection Arab... 108 9e-037
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 154 1e-036
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 101 6e-036
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 100 1e-035
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 79 2e-035
emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cD... 143 2e-033
gb|CW845819.1|CW845819 GT12585.Ds5.10.23.2003.jx32.525 Arab... 79 2e-029
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 77 2e-028
emb|AX412747.1| Sequence 511 from Patent WO0222675 108 9e-028
emb|AX508002.1| Sequence 2697 from Patent WO0216655 108 9e-028
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 117 9e-026
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 117 9e-026
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 117 9e-026
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 112 4e-024
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 112 4e-024
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 112 4e-024
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 111 1e-023
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 111 1e-023
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 109 4e-023
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 106 3e-022
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 106 3e-022
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 106 3e-022
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 188 bits (405), Expect = 5e-047
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
K+R Y PDVFDR+F ITRGGI KASRVINISEDI+AGFN+TLRQGN+THHEYIQVGKG
Sbjct: 4189 KIRMHYGHPDVFDRVFHITRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKG 4368
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 4369 RDVGLNQIALFEGKVAGGNGEQVLSRDV 4452
Score = 121 bits (259), Expect = 7e-027
Identities = 56/80 (70%), Positives = 60/80 (75%)
Frame = +3 / -1
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRLRTCSP PPATFPSN AI PTSRP PT IYS V FP R+V L PA ISSLIL+T
Sbjct: 4451 TSRLRTCSPFPPATFPSNRAI*LSPTSRPLPT*IYS**VTFP*RRVVLKPANISSLILMT 4272
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
R+A +PPRV N SKTSG
Sbjct: 4271 REALLIPPRVI*NTLSKTSG 4212
>gb|AV831087.1|AV831087 AV831087 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-84-B14 5',
mRNA sequence
Length = 547
Score = 177 bits (382), Expect = 8e-044
Identities = 73/79 (92%), Positives = 77/79 (97%)
Frame = -2 / +2
Query: 238 DVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIA 59
DVFDR+F ITRGGI KASRVINISEDI+AGFN+TLRQGN+THHEYIQVGKGRDVGLNQIA
Sbjct: 2 DVFDRVFHITRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIA 181
Query: 58 LFEGKVAGGNGEQVLSRDV 2
LFEGKVAGGNGEQVLSRDV
Sbjct: 182 LFEGKVAGGNGEQVLSRDV 238
Score = 118 bits (253), Expect = 5e-026
Identities = 55/79 (69%), Positives = 59/79 (74%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRLRTCSP PPATFPSN AI PTSRP PT IYS V FP R+V L PA ISSLIL+T
Sbjct: 237 TSRLRTCSPFPPATFPSNRAI*LSPTSRPLPT*IYS**VTFP*RRVVLKPANISSLILMT 58
Query: 183 RDAXXMPPRVXXNIRSKTS 239
R+A +PPRV N SKTS
Sbjct: 57 REALLIPPRVI*NTLSKTS 1
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 177 bits (382), Expect = 8e-044
Identities = 73/79 (92%), Positives = 77/79 (97%)
Frame = -2 / +2
Query: 238 DVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIA 59
DVFDR+F ITRGGI KASRVINISEDI+AGFN+TLRQGN+THHEYIQVGKGRDVGLNQIA
Sbjct: 2 DVFDRVFHITRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIA 181
Query: 58 LFEGKVAGGNGEQVLSRDV 2
LFEGKVAGGNGEQVLSRDV
Sbjct: 182 LFEGKVAGGNGEQVLSRDV 238
Score = 118 bits (253), Expect = 5e-026
Identities = 55/79 (69%), Positives = 59/79 (74%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRLRTCSP PPATFPSN AI PTSRP PT IYS V FP R+V L PA ISSLIL+T
Sbjct: 237 TSRLRTCSPFPPATFPSNRAI*LSPTSRPLPT*IYS**VTFP*RRVVLKPANISSLILMT 58
Query: 183 RDAXXMPPRVXXNIRSKTS 239
R+A +PPRV N SKTS
Sbjct: 57 REALLIPPRVI*NTLSKTS 1
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 173 bits (372), Expect = 2e-042
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASR IN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4147 KVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKG 4326
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 4327 RDVGLNQISLFEAKVACGNGEQTLSRDL 4410
Score = 108 bits (230), Expect = 7e-023
Identities = 48/79 (60%), Positives = 52/79 (65%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L CSP P AT S S IWFKPTS PFPTW+YS V P +VEL PA ISSL + R
Sbjct: 4406 SLLNVCSPFPQATLASKSDIWFKPTSLPFPTWMYS*WVTLPRLRVELKPAKISSLRFMPR 4227
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A MPPRV I SKTSG
Sbjct: 4226 EALLMPPRVMWKILSKTSG 4170
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 173 bits (372), Expect = 2e-042
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASR IN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4300 KVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKG 4479
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 4480 RDVGLNQISLFEAKVACGNGEQTLSRDL 4563
Score = 108 bits (230), Expect = 7e-023
Identities = 48/79 (60%), Positives = 52/79 (65%)
Frame = +3 / -3
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L CSP P AT S S IWFKPTS PFPTW+YS V P +VEL PA ISSL + R
Sbjct: 4559 SLLNVCSPFPQATLASKSDIWFKPTSLPFPTWMYS*WVTLPRLRVELKPAKISSLRFMPR 4380
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A MPPRV I SKTSG
Sbjct: 4379 EALLMPPRVMWKILSKTSG 4323
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 173 bits (372), Expect = 2e-042
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASR IN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4147 KVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKG 4326
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 4327 RDVGLNQISLFEAKVACGNGEQTLSRDL 4410
Score = 108 bits (230), Expect = 7e-023
Identities = 48/79 (60%), Positives = 52/79 (65%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S L CSP P AT S S IWFKPTS PFPTW+YS V P +VEL PA ISSL + R
Sbjct: 4406 SLLNVCSPFPQATLASKSDIWFKPTSLPFPTWMYS*WVTLPRLRVELKPAKISSLRFMPR 4227
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A MPPRV I SKTSG
Sbjct: 4226 EALLMPPRVMWKILSKTSG 4170
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 172 bits (371), Expect = 3e-042
Identities = 66/88 (75%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4372 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 4551
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4552 RDVGLNQISMFEAKIANGNGEQTLSRDI 4635
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 172 bits (371), Expect = 3e-042
Identities = 66/88 (75%), Positives = 79/88 (89%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4514 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 4693
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4694 RDVGLNQISMFEAKIANGNGEQTLSRDI 4777
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 172 bits (370), Expect = 4e-042
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PD+FDR+F +TRGGI KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4231 KVRFHYGHPDIFDRLFHLTRGGICKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 4410
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4411 RDVGLNQISMFEAKIANGNGEQTLSRDL 4494
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 172 bits (370), Expect = 4e-042
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 639 KVRFHYGHPDVFDRLFHLTRGGVCKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 818
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 819 RDVGLNQISMFEAKIANGNGEQTLSRDL 902
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 172 bits (370), Expect = 4e-042
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4249 KVRFHYGHPDVFDRLFHLTRGGVCKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 4428
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4429 RDVGLNQISMFEAKIANGNGEQTLSRDL 4512
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 172 bits (370), Expect = 4e-042
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PD+FDR+F +TRGGI KAS+VIN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 4231 KVRFHYGHPDIFDRLFHLTRGGICKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKG 4410
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4411 RDVGLNQISMFEAKIANGNGEQTLSRDL 4494
>emb|AX506240.1| Sequence 935 from Patent WO0216655
Length = 5273
Score = 170 bits (366), Expect = 1e-041
Identities = 70/88 (79%), Positives = 77/88 (87%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 3657 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 3836
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQVLSRDV
Sbjct: 3837 RDVGLNQISMFEAKVASGNGEQVLSRDV 3920
Score = 110 bits (235), Expect = 1e-023
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRLRTCSP P AT SN I F PTSRPFPT +YSW V FP V+LNPA +SSLI IT
Sbjct: 3919 TSRLRTCSPFPLATLASNIDI*FNPTSRPFPT*MYSWWVTFPPLNVQLNPAKMSSLIFIT 3740
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A MPPR+ S TSG
Sbjct: 3739 LEALLMPPRLKNQNLSNTSG 3680
>ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTHASE-LIKE 5);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT4G03550 (ATGSL05) mRNA, complete cds
Length = 5835
Score = 170 bits (366), Expect = 1e-041
Identities = 70/88 (79%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 3892 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 4071
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQVLSRDV
Sbjct: 4072 RDVGLNQISMFEAKVASGNGEQVLSRDV 4155
Score = 110 bits (235), Expect = 1e-023
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRLRTCSP P AT SN I F PTSRPFPT +YSW V FP V+LNPA +SSLI IT
Sbjct: 4154 TSRLRTCSPFPLATLASNIDI*FNPTSRPFPT*MYSWWVTFPPLNVQLNPAKMSSLIFIT 3975
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A MPPR+ S TSG
Sbjct: 3974 LEALLMPPRLKNQNLSNTSG 3915
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 11323 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 11502
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 11503 RDVGLNQISMFEAKVASGNGEQALSRDV 11586
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 11585 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 11406
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 11405 LEALLIPPRGTNQNRSNTSG 11346
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 1826 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 2005
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 2006 RDVGLNQISMFEAKVASGNGEQALSRDV 2089
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 2088 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 1909
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 1908 LEALLIPPRGTNQNRSNTSG 1849
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 180261 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 180082
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 180081 RDVGLNQISMFEAKVASGNGEQALSRDV 179998
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 179999 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 180178
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 180179 LEALLIPPRGTNQNRSNTSG 180238
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 2539651 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 2539830
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 2539831 RDVGLNQISMFEAKVASGNGEQALSRDV 2539914
Score = 117 bits (251), Expect = 9e-026
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 1576212 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 1576391
Query: 85 RDVGL 71
GL
Sbjct: 1576392 PQFGL 1576406
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 2539913 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 2539734
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 2539733 LEALLIPPRGTNQNRSNTSG 2539674
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 72848 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 73027
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 73028 RDVGLNQISMFEAKVASGNGEQALSRDV 73111
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 73110 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 72931
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 72930 LEALLIPPRGTNQNRSNTSG 72871
>ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHASE LIKE-1); 1,3-beta-glucan
synthase/ transferase, transferring glycosyl groups
AT4G04970 (ATGSL1) mRNA, complete cds
Length = 5827
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 3706 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 3885
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 3886 RDVGLNQISMFEAKVASGNGEQALSRDV 3969
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 3968 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 3789
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 3788 LEALLIPPRGTNQNRSNTSG 3729
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 168 bits (361), Expect = 6e-041
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 2540831 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 2541010
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KVA GNGEQ LSRDV
Sbjct: 2541011 RDVGLNQISMFEAKVASGNGEQALSRDV 2541094
Score = 117 bits (251), Expect = 9e-026
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 1577397 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 1577576
Query: 85 RDVGL 71
GL
Sbjct: 1577577 PQFGL 1577591
Score = 108 bits (231), Expect = 5e-023
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -1
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 2541093 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 2540914
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 2540913 LEALLIPPRGTNQNRSNTSG 2540854
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 166 bits (358), Expect = 2e-040
Identities = 64/88 (72%), Positives = 78/88 (88%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AGFNSTLR+G ++HHEYIQVGKG
Sbjct: 3985 KVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKG 4164
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE K+A G+GEQ LSRD+
Sbjct: 4165 RDVGLNQISMFEAKIANGSGEQTLSRDL 4248
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 165 bits (354), Expect = 6e-040
Identities = 66/88 (75%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PD+FDRIF ITRGG+ KAS+VIN+SEDI+ GFNSTLR G +THHEYIQVGKG
Sbjct: 4180 RVRFHYGHPDIFDRIFHITRGGVSKASKVINLSEDIFGGFNSTLRGGYVTHHEYIQVGKG 4359
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLN I++FE KVA GNGEQ LSRDV
Sbjct: 4360 RDVGLNPISIFEAKVANGNGEQTLSRDV 4443
Score = 104 bits (221), Expect = 1e-021
Identities = 48/80 (60%), Positives = 51/80 (63%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRL CSP P ATF S I F PTSRPFPTWIYS CV +P R+VEL P ISSL IT
Sbjct: 4442 TSRLSVCSPFPFATFASKIEIGFNPTSRPFPTWIYS*CVTYPPRRVELKPPKISSLKFIT 4263
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A PP V I S SG
Sbjct: 4262 FEALLTPPLVM*KILSNMSG 4203
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 164 bits (353), Expect = 8e-040
Identities = 65/88 (73%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PD+FDRIF ITRGGI KAS++IN+SEDI+AG+NSTLR G +THHEYIQ GKG
Sbjct: 4177 RVRFHYGHPDIFDRIFHITRGGISKASKIINLSEDIFAGYNSTLRGGYVTHHEYIQAGKG 4356
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVG+NQI+ FE KVA GNGEQ LSRDV
Sbjct: 4357 RDVGMNQISFFEAKVANGNGEQTLSRDV 4440
>emb|AL094620.1|CNS00XA6 Arabidopsis thaliana genome survey sequence T7 end of BAC T13I8 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 660
Score = 164 bits (352), Expect = 1e-039
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 280 KVRMHYGHPDVFDRFWFVPRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 459
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLN I++FE KVA GNGEQ LSRDV
Sbjct: 460 RDVGLN*ISMFEAKVASGNGEQALSRDV 543
Score = 108 bits (231), Expect(2) = 7e-024
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L CSPLP AT SN I FKPTS P PT +YSWCV FP KV+LNPA ISSL+ IT
Sbjct: 542 TSLLNACSPLPLATLASNIEI*FKPTSLPLPT*MYSWCVTFPPLKVQLNPANISSLMFIT 363
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
+A +PPR RS TSG
Sbjct: 362 LEALLIPPRGTNQNRSNTSG 303
Score = 21.7 bits (41), Expect(2) = 7e-024
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3 / -2
Query: 273 AXXXCPXXTKLXXXXXINXAS 335
A CP TKL IN AS
Sbjct: 269 ARTRCPKVTKLVS*ADINHAS 207
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 111 bits (236), Expect(2) = 1e-038
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 154 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
AGFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 64128 AGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDI 63976
Score = 69.3 bits (145), Expect(2) = 1e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 64332 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 64216
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 111 bits (236), Expect(2) = 3e-038
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = -2 / -2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+++GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 91289 LFSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 91131
Score = 68.4 bits (143), Expect(2) = 3e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 91487 RVRFHYGHPDVFDRLFHLTRGGVCKASKVINLSEDIFAG 91371
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 109 bits (232), Expect(2) = 9e-038
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -2 / -1
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ +GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 1649646 LVSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 1649488
Score = 100 bits (212), Expect(2) = 1e-035
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = -2 / +2
Query: 157 YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ G+NSTLR G +THHEYIQ GKGRDVG+NQI+ FE KVA GNGEQ LSRDV
Sbjct: 1986944 HPGYNSTLRGGYVTHHEYIQAGKGRDVGMNQISFFEAKVANGNGEQTLSRDV 1987099
Score = 70.7 bits (148), Expect(2) = 1e-035
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDRIF ITRGGI KAS++IN+SEDI+AG
Sbjct: 1986758 RVRFHYGHPDIFDRIFHITRGGISKASKIINLSEDIFAG 1986874
Score = 68.4 bits (143), Expect(2) = 9e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGGI KAS+VIN+SEDI+AG
Sbjct: 1649840 RVRFHYGHPDIFDRLFHLTRGGICKASKVINLSEDIFAG 1649724
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 109 bits (232), Expect(2) = 1e-037
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -2 / -2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ +GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 31294 LVSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 31136
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGGI KAS+VIN+SEDI+AG
Sbjct: 31488 RVRFHYGHPDIFDRLFHLTRGGICKASKVINLSEDIFAG 31372
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 109 bits (232), Expect(2) = 1e-037
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -2 / -3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ +GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 81843 LVSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 81685
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGGI KAS+VIN+SEDI+AG
Sbjct: 82037 RVRFHYGHPDIFDRLFHLTRGGICKASKVINLSEDIFAG 81921
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 79.0 bits (166), Expect(3) = 3e-037
Identities = 34/44 (77%), Positives = 35/44 (79%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTL 134
+VR Y PDVFDRIF ITRGGI KASRVINISEDIYAG S L
Sbjct: 19203 RVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGMRSRL 19072
Score = 76.7 bits (161), Expect(3) = 3e-037
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -2 / -3
Query: 112 HEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ ++ VGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 18793 NSFM*VGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 18683
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWI 104
TS LRTCSP PPATFPSN AIW PTS P PT++
Sbjct: 18684 TSLLRTCSPFPPATFPSNRAIWLSPTSLPLPTYM 18785
Score = 53.3 bits (110), Expect(3) = 3e-037
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2 / -3
Query: 160 IYAGFNSTLRQGNITHHEYIQ 98
I+AGFNSTLRQGNITHHEYIQ
Sbjct: 18931 IFAGFNSTLRQGNITHHEYIQ 18869
Score = 51.9 bits (107), Expect(3) = 3e-021
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3 / +2
Query: 150 PAYISSLILITRDAXXMPPRVXXNIRSKTSG 242
PAYISSL+LITRDA +PPRV NI S TSG
Sbjct: 19088 PAYISSLMLITRDALLIPPRVI*NILSNTSG 19180
Score = 35.0 bits (70), Expect(3) = 3e-021
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3 / +3
Query: 102 IYSWCVMFPWRKVELNPAYI 161
IYSW V+FP VELNPA I
Sbjct: 18873 IYSWWVIFPCLSVELNPANI 18932
>gb|CL509491.1|CL509491 SAIL_812_E05.v2 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_812_E05.v2, DNA sequence
Length = 886
Score = 108 bits (230), Expect(2) = 9e-037
Identities = 40/53 (75%), Positives = 49/53 (92%)
Frame = -2 / -2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+++GFN TLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 255 LFSGFNYTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 97
Score = 66.1 bits (138), Expect(2) = 9e-037
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN SEDI+AG
Sbjct: 453 RVRFHYGHPDVFDRLFHLTRGGVCKASKVINPSEDIFAG 337
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 154 bits (330), Expect = 1e-036
Identities = 61/88 (69%), Positives = 75/88 (85%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PDVFDRIF ITRGGI K+SR IN+SED++AG+N+TLR+G IT++EY+QVGKG
Sbjct: 4312 RVRFHYGHPDVFDRIFHITRGGISKSSRTINLSEDVFAGYNTTLRRGCITYNEYLQVGKG 4491
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+ FE KVA GN EQ +SRD+
Sbjct: 4492 RDVGLNQISKFEAKVANGNSEQTISRDI 4575
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 101 bits (216), Expect(2) = 6e-036
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
IS + GFNSTLR+G ++HHEYIQVGKGRDVGLNQI++FE K+A G+GEQ LSRD+
Sbjct: 61754 ISFWLLLGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDL 61924
Score = 69.8 bits (146), Expect(2) = 6e-036
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 61557 RVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAG 61673
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 100 bits (212), Expect(2) = 1e-035
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = -2 / -2
Query: 157 YAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ G+NSTLR G +THHEYIQ GKGRDVG+NQI+ FE KVA GNGEQ LSRDV
Sbjct: 66912 HPGYNSTLRGGYVTHHEYIQAGKGRDVGMNQISFFEAKVANGNGEQTLSRDV 66757
Score = 70.7 bits (148), Expect(2) = 1e-035
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDRIF ITRGGI KAS++IN+SEDI+AG
Sbjct: 67098 RVRFHYGHPDIFDRIFHITRGGISKASKIINLSEDIFAG 66982
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete
sequence
Length = 99128
Score = 79.4 bits (167), Expect(3) = 2e-035
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2 / +2
Query: 103 IQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+QVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 66716 LQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 66817
Score = 73.0 bits (153), Expect(3) = 2e-035
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
++R Y PDVFDR+F ITRGGI KASRVINISEDI+AG
Sbjct: 66326 RIRMHYGHPDVFDRVFHITRGGISKASRVINISEDIFAG 66442
Score = 49.2 bits (101), Expect(3) = 2e-035
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 157 YAGFNSTLRQGNITHHEYIQV 95
+ GFN+TLRQGN+THHEYIQV
Sbjct: 66594 FPGFNTTLRQGNVTHHEYIQV 66656
>emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH7ZB11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1717
Score = 143 bits (307), Expect = 2e-033
Identities = 60/87 (68%), Positives = 69/87 (79%)
Frame = -2 / +1
Query: 262 VRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGR 83
+ Y P+ F +IF IT I K SR+INIS DI++ FN+TLRQGN THHEYIQVGKGR
Sbjct: 1 IHIHYYHPNFFYKIFHITHNDISKTSRIINIS*DIFSAFNTTLRQGNFTHHEYIQVGKGR 180
Query: 82 DVGLNQIALFEGKVAGGNGEQVLSRDV 2
DVGLNQIALFE KVAGGN +QVLSR+V
Sbjct: 181 DVGLNQIALFEEKVAGGNSKQVLSRNV 261
>gb|CW845819.1|CW845819 GT12585.Ds5.10.23.2003.jx32.525 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT12585, DNA sequence
Length = 525
Score = 79.4 bits (167), Expect(2) = 2e-029
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2 / -3
Query: 154 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGG 32
AGFNSTLR+GN+THHEYIQVGKGRDVGLNQI++ ++ G
Sbjct: 130 AGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMLRPRLLTG 8
Score = 69.3 bits (145), Expect(2) = 2e-029
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDR+F +TRGG+ KAS+VIN+SEDI+AG
Sbjct: 334 RVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAG 218
>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
Length = 5281
Score = 77.1 bits (162), Expect(2) = 2e-028
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQ 128
+VR Y PDVFDRIF ITRGGI KASRVINISEDIYAG + L Q
Sbjct: 3559 RVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGRDVGLNQ 3696
Score = 69.3 bits (145), Expect(2) = 2e-028
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2 / +1
Query: 88 GRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 3673 GRDVGLNQIALFEGKVAGGNGEQVLSRDV 3759
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 108 bits (230), Expect(2) = 9e-028
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = -2 / +1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4060 GFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 4209
Score = 35.9 bits (72), Expect(2) = 9e-028
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRG 203
+VR Y PD+FDR+F +TRG
Sbjct: 4000 RVRFHYGHPDIFDRLFHLTRG 4062
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 108 bits (230), Expect(2) = 9e-028
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = -2 / +1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4060 GFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 4209
Score = 35.9 bits (72), Expect(2) = 9e-028
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRG 203
+VR Y PD+FDR+F +TRG
Sbjct: 4000 RVRFHYGHPDIFDRLFHLTRG 4062
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
Length = 159629
Score = 117 bits (251), Expect = 9e-026
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 38116 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 38295
Query: 85 RDVGL 71
GL
Sbjct: 38296 PQFGL 38310
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
sequence
Length = 116448
Score = 117 bits (251), Expect = 9e-026
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 16839 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 17018
Query: 85 RDVGL 71
GL
Sbjct: 17019 PQFGL 17033
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM,
complete sequence
Length = 95519
Score = 117 bits (251), Expect = 9e-026
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR + ++RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 14945 KVRMHYGHPDVFDRFWFLSRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 14766
Query: 85 RDVGL 71
GL
Sbjct: 14765 PQFGL 14751
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 112 bits (239), Expect = 4e-024
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +2
Query: 181 VINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
++ I +Y GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 12725 LLMIDSCLYIGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDL 12904
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 112 bits (239), Expect = 4e-024
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +1
Query: 181 VINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
++ I +Y GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 94927 LLMIDSCLYIGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDL 95106
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 112 bits (239), Expect = 4e-024
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +2
Query: 181 VINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
++ I +Y GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 5711582 LLMIDSCLYIGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDL 5711761
Score = 111 bits (236), Expect = 1e-023
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = -2 / +3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+++GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 13605198 LFSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 13605356
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 111 bits (236), Expect = 1e-023
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -2 / -2
Query: 154 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
AGFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 3925287 AGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDI 3925135
Score = 101 bits (216), Expect = 6e-021
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
IS + GFNSTLR+G ++HHEYIQVGKGRDVGLNQI++FE K+A G+GEQ LSRD+
Sbjct: 13465313 ISFWLLLGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDL 13465483
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 111 bits (236), Expect = 1e-023
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 154 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
AGFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 4112314 AGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDI 4112162
Score = 101 bits (216), Expect = 6e-021
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
IS + GFNSTLR+G ++HHEYIQVGKGRDVGLNQI++FE K+A G+GEQ LSRD+
Sbjct: 14549168 ISFWLLLGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDL 14549338
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 109 bits (232), Expect = 4e-023
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -2 / -3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ +GFNSTLR+GN+THHEYIQVGKGRDVGLNQI++FE K+A GNGEQ LSRD+
Sbjct: 1649769 LVSGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDL 1649611
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 508,094,689
Number of Sequences: 1013581
Number of extensions: 6032784
Number of successful extensions: 195788
Number of sequences better than 1.0e-020: 63
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 14457108826
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)