TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE8g03.yg.2.1
(360 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F... 90 2e-027
gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 90 2e-027
ref|NM_100370.2| Arabidopsis thaliana transferase, transfer... 90 2e-027
gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 90 2e-027
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 90 1e-025
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 91 5e-022
emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosom... 91 5e-022
emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome... 91 5e-022
gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 91 5e-022
gb|AV563250.1|AV563250 AV563250 Arabidopsis thaliana green ... 91 2e-021
gb|AV566769.1|AV566769 AV566769 Arabidopsis thaliana green ... 91 2e-021
gb|AI995432.1|AI995432 701674073 A. thaliana, Columbia Col-... 91 2e-021
ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT... 91 4e-021
dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosp... 91 4e-021
ref|NM_117080.4| Arabidopsis thaliana transferase, transfer... 91 4e-021
dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosp... 91 4e-021
dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosp... 91 4e-021
dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosp... 91 4e-021
emb|CQ805456.1| Sequence 1867 from Patent WO2004035798 91 4e-021
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
Length = 89713
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRS 56
RYLFVRW L V NMY++ G+ GDTD+EE++SG HKTVIV+G+ GS+ LLRS
Sbjct: 30643 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGLVTLGSDALLRS 30801
Score = 47.8 bits (98), Expect(3) = 2e-027
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+Q+VPLLASRSQALR
Sbjct: 30478 CRNSTRMQIVPLLASRSQALR 30540
Score = 23.5 bits (45), Expect(3) = 2e-027
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 40 KDDVVPSETP 11
+DD+VPSE+P
Sbjct: 30811 RDDIVPSESP 30840
>gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3471
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRS 56
RYLFVRW L V NMY++ G+ GDTD+EE++SG HKTVIV+G+ GS+ LLRS
Sbjct: 3019 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGLVTLGSDALLRS 3177
Score = 47.8 bits (98), Expect(3) = 2e-027
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+Q+VPLLASRSQALR
Sbjct: 2959 CRNSTRMQIVPLLASRSQALR 3021
Score = 23.5 bits (45), Expect(3) = 2e-027
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 40 KDDVVPSETP 11
+DD+VPSE+P
Sbjct: 3187 RDDIVPSESP 3216
>ref|NM_100370.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT1G04920 mRNA, complete cds
Length = 3469
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRS 56
RYLFVRW L V NMY++ G+ GDTD+EE++SG HKTVIV+G+ GS+ LLRS
Sbjct: 3019 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGLVTLGSDALLRS 3177
Score = 47.8 bits (98), Expect(3) = 2e-027
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+Q+VPLLASRSQALR
Sbjct: 2959 CRNSTRMQIVPLLASRSQALR 3021
Score = 23.5 bits (45), Expect(3) = 2e-027
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 40 KDDVVPSETP 11
+DD+VPSE+P
Sbjct: 3187 RDDIVPSESP 3216
>gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3189
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRS 56
RYLFVRW L V NMY++ G+ GDTD+EE++SG HKTVIV+G+ GS+ LLRS
Sbjct: 2911 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGLVTLGSDALLRS 3069
Score = 47.8 bits (98), Expect(3) = 2e-027
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / +1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+Q+VPLLASRSQALR
Sbjct: 2851 CRNSTRMQIVPLLASRSQALR 2913
Score = 23.5 bits (45), Expect(3) = 2e-027
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 40 KDDVVPSETP 11
+DD+VPSE+P
Sbjct: 3079 RDDIVPSESP 3108
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 89.5 bits (189), Expect(2) = 1e-025
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3 / -1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRS 56
RYLFVRW L V NMY++ G+ GDTD+EE++SG HKTVIV+G+ GS+ LLRS
Sbjct: 1392027 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGLVTLGSDALLRS 1391869
Score = 47.8 bits (98), Expect(2) = 1e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 358 CRNSTRLQVVPLLASRSQALR 296
CRNSTR+Q+VPLLASRSQALR
Sbjct: 1392192 CRNSTRMQIVPLLASRSQALR 1392130
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 91.3 bits (193), Expect(2) = 5e-022
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 2232234 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 2232413
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 2232414 DAVPQESP 2232437
Score = 33.6 bits (67), Expect(2) = 5e-022
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 349 STRLQVVPLLASRSQALR*EHIHN 278
+TRL V+PL ASR QALR E + N
Sbjct: 2232083 ATRLNVIPLCASRIQALRLETVTN 2232154
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
Length = 198005
Score = 91.3 bits (193), Expect(2) = 5e-022
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 144741 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 144920
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 144921 DAVPQESP 144944
Score = 33.6 bits (67), Expect(2) = 5e-022
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 349 STRLQVVPLLASRSQALR*EHIHN 278
+TRL V+PL ASR QALR E + N
Sbjct: 144590 ATRLNVIPLCASRIQALRLETVTN 144661
>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
Length = 85907
Score = 91.3 bits (193), Expect(2) = 5e-022
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 46380 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 46559
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 46560 DAVPQESP 46583
Score = 33.6 bits (67), Expect(2) = 5e-022
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 349 STRLQVVPLLASRSQALR*EHIHN 278
+TRL V+PL ASR QALR E + N
Sbjct: 46229 ATRLNVIPLCASRIQALRLETVTN 46300
>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
Length = 83922
Score = 91.3 bits (193), Expect(2) = 5e-022
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / -2
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 81872 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 81693
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 81692 DAVPQESP 81669
Score = 33.6 bits (67), Expect(2) = 5e-022
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / -1
Query: 349 STRLQVVPLLASRSQALR*EHIHN 278
+TRL V+PL ASR QALR E + N
Sbjct: 82023 ATRLNVIPLCASRIQALRLETVTN 81952
>gb|AV563250.1|AV563250 AV563250 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ183h10F 3', mRNA sequence
Length = 549
Score = 91.3 bits (193), Expect(2) = 2e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / -3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 430 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 251
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 250 DAVPQESP 227
Score = 30.9 bits (61), Expect(2) = 2e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 481 ATRLNVIPLCASRIQALR 428
>gb|AV566769.1|AV566769 AV566769 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ250b02F 3', mRNA sequence
Length = 554
Score = 91.3 bits (193), Expect(2) = 2e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / -1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 368 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 189
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 188 DAVPQESP 165
Score = 30.9 bits (61), Expect(2) = 2e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 419 ATRLNVIPLCASRIQALR 366
>gb|AI995432.1|AI995432 701674073 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701674073, mRNA sequence
Length = 557
Score = 91.3 bits (193), Expect(2) = 2e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / -1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 413 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 234
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 233 DAVPQESP 210
Score = 30.9 bits (61), Expect(2) = 2e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 464 ATRLNVIPLCASRIQALR 411
>ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT4G10120 transcript variant
AT4G10120.2 mRNA, complete cds
Length = 3468
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3039 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3218
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3219 DAVPQESP 3242
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2988 ATRLNVIPLCASRIQALR 3041
>dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL21-92-G10
Length = 3462
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +3
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3039 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3218
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3219 DAVPQESP 3242
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2988 ATRLNVIPLCASRIQALR 3041
>ref|NM_117080.4| Arabidopsis thaliana transferase, transferring glycosyl groups
AT4G10120 transcript variant AT4G10120.1 mRNA, complete
cds
Length = 3457
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3028 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3207
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3208 DAVPQESP 3231
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2977 ATRLNVIPLCASRIQALR 3030
>dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-62-A14
Length = 3438
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3028 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3207
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3208 DAVPQESP 3231
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2977 ATRLNVIPLCASRIQALR 3030
>dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-49-M07
Length = 3438
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3028 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3207
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3208 DAVPQESP 3231
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2977 ATRLNVIPLCASRIQALR 3030
>dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-83-J09
Length = 3438
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 3028 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3207
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3208 DAVPQESP 3231
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2977 ATRLNVIPLCASRIQALR 3030
>emb|CQ805456.1| Sequence 1867 from Patent WO2004035798
Length = 3252
Score = 91.3 bits (193), Expect(2) = 4e-021
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3 / +1
Query: 214 RYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTVIVRGVTEKGSEGLLRSPGSYKKD 35
RYL +RWG+ + GE GDTD+E++L GLHKT+I++GV SE LLRS ++K++
Sbjct: 2974 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKRE 3153
Query: 34 DVVPSETP 11
D VP E+P
Sbjct: 3154 DAVPQESP 3177
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 349 STRLQVVPLLASRSQALR 296
+TRL V+PL ASR QALR
Sbjct: 2923 ATRLNVIPLCASRIQALR 2976
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 776,690,302
Number of Sequences: 1013581
Number of extensions: 10664931
Number of successful extensions: 274918
Number of sequences better than 1.0e-020: 22
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 16451192802
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)