TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE36e08.yg.2.1
(352 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF506030.1| Arabidopsis thaliana laccase (lac1) mRNA, co... 181 9e-045
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 181 9e-045
ref|NM_129597.2| Arabidopsis thaliana copper ion binding AT... 181 9e-045
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 181 9e-045
dbj|AB010692.1| Arabidopsis thaliana genomic DNA, chromosom... 175 4e-043
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 175 4e-043
ref|NM_120621.1| Arabidopsis thaliana copper ion binding AT... 175 4e-043
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 175 4e-043
gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E... 104 1e-036
gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9... 104 1e-036
ref|NM_128574.1| Arabidopsis thaliana copper ion binding AT... 104 1e-036
emb|AX412603.1| Sequence 367 from Patent WO0222675 104 1e-036
emb|AX507215.1| Sequence 1910 from Patent WO0216655 104 1e-036
dbj|AK221241.1| Arabidopsis thaliana mRNA for putative lacc... 104 1e-036
gb|BH749209.1|BH749209 SALK_047455.54.75.x Arabidopsis thal... 142 4e-033
gb|BH749210.1|BH749210 SALK_047456.56.00.x Arabidopsis thal... 142 4e-033
gb|BX835965.1|BX835965 BX835965 Arabidopsis thaliana Hormon... 99 1e-032
emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome... 100 2e-029
ref|NM_120795.3| Arabidopsis thaliana copper ion binding AT... 100 2e-029
emb|BX831710.1|CNS09ZVI Arabidopsis thaliana Full-length cD... 100 2e-029
gb|BV012013.1| MASC_STS13812 Arabidopsis thaliana (Lezoux/P... 80 2e-026
gb|BV012015.1| MASC_STS13810 Arabidopsis thaliana (Wassilew... 80 2e-026
gb|BV012010.1| MASC_STS13807 Arabidopsis thaliana (Guecking... 80 2e-026
gb|BV012009.1| MASC_STS13814 Arabidopsis thaliana (C24 acce... 80 2e-026
emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5... 80 3e-026
ref|NM_120182.2| Arabidopsis thaliana copper ion binding AT... 80 3e-026
gb|BV012011.1| MASC_STS13811 Arabidopsis thaliana (Weininge... 79 3e-026
gb|AU229348.1|AU229348 AU229348 RAFL16 Arabidopsis thaliana... 79 1e-025
gb|BV012014.1| MASC_STS13808 Arabidopsis thaliana (Koncheze... 77 2e-025
gb|BV012012.1| MASC_STS13813 Arabidopsis thaliana (Cap Verd... 77 2e-025
gb|AQ968416.1|AQ968416 LERJC35TF LERG Arabidopsis thaliana ... 79 2e-025
ref|NM_120181.3| Arabidopsis thaliana copper ion binding AT... 79 3e-025
dbj|AK117360.1| Arabidopsis thaliana At5g01040 mRNA for put... 79 3e-025
dbj|AK176457.1| Arabidopsis thaliana mRNA for laccase -like... 79 3e-025
gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome II... 73 5e-025
gb|AQ968417.1|AQ968417 LERJC35TR LERG Arabidopsis thaliana ... 79 5e-025
dbj|AK117639.1| Arabidopsis thaliana At3g09220 mRNA for put... 73 5e-025
ref|NM_111756.2| Arabidopsis thaliana copper ion binding AT... 73 5e-025
gb|BT004971.1| Arabidopsis thaliana clone U50490 putative l... 73 5e-025
dbj|AB017064.1| Arabidopsis thaliana genomic DNA, chromosom... 84 3e-024
ref|NM_124184.2| Arabidopsis thaliana copper ion binding AT... 84 3e-024
gb|BT002919.1| Arabidopsis thaliana clone RAFL15-04-D21 (R2... 84 3e-024
gb|BT005152.1| Arabidopsis thaliana clone U20177 putative l... 84 3e-024
emb|CS130513.1| Sequence 31 from Patent WO2005063995 84 3e-024
emb|BX832175.1|CNS0A10T Arabidopsis thaliana Full-length cD... 76 1e-023
gb|BP804301.1|BP804301 BP804301 RAFL16 Arabidopsis thaliana... 69 4e-023
dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosom... 74 6e-021
ref|NM_120197.3| Arabidopsis thaliana copper ion binding AT... 74 6e-021
gb|BT014855.1| Arabidopsis thaliana At5g01190 gene, complet... 74 6e-021
ref|NM_125281.1| Arabidopsis thaliana copper ion binding AT... 74 6e-021
emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome... 79 8e-021
dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosom... 79 8e-021
ref|NM_120404.3| Arabidopsis thaliana copper ion binding AT... 79 9e-021
gb|AY065128.1| Arabidopsis thaliana laccase (diphenol oxida... 79 9e-021
emb|BX831525.1|CNS0A1O5 Arabidopsis thaliana Full-length cD... 79 9e-021
emb|BX831939.1|CNS0A0YM Arabidopsis thaliana Full-length cD... 79 9e-021
emb|BX832282.1|CNS0A126 Arabidopsis thaliana Full-length cD... 79 9e-021
gb|AY081592.1| Arabidopsis thaliana laccase (diphenol oxida... 79 9e-021
>gb|AF506030.1| Arabidopsis thaliana laccase (lac1) mRNA, complete cds
Length = 1782
Score = 181 bits (389), Expect = 9e-045
Identities = 69/115 (60%), Positives = 86/115 (74%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH+H IPGVFT DFPA PPV FD+T N+ R+
Sbjct: 1175 CQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDFPAKPPVKFDYTGNNISRS 1354
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QP +GT+LY+++YG+ VQIV QDTGI E HP+H+HGY FY++A GFGN++P
Sbjct: 1355 LYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNP 1519
>gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete
sequence
Length = 82652
Score = 181 bits (389), Expect = 9e-045
Identities = 69/115 (60%), Positives = 86/115 (74%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH+H IPGVFT DFPA PPV FD+T N+ R+
Sbjct: 48942 CQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDFPAKPPVKFDYTGNNISRS 48763
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QP +GT+LY+++YG+ VQIV QDTGI E HP+H+HGY FY++A GFGN++P
Sbjct: 48762 LYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNP 48598
>ref|NM_129597.2| Arabidopsis thaliana copper ion binding AT2G40370 mRNA, complete cds
Length = 1778
Score = 181 bits (389), Expect = 9e-045
Identities = 69/115 (60%), Positives = 86/115 (74%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH+H IPGVFT DFPA PPV FD+T N+ R+
Sbjct: 1175 CQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDFPAKPPVKFDYTGNNISRS 1354
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QP +GT+LY+++YG+ VQIV QDTGI E HP+H+HGY FY++A GFGN++P
Sbjct: 1355 LYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNP 1519
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 181 bits (389), Expect = 9e-045
Identities = 69/115 (60%), Positives = 86/115 (74%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH+H IPGVFT DFPA PPV FD+T N+ R+
Sbjct: 16866032 CQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDFPAKPPVKFDYTGNNISRS 16865853
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QP +GT+LY+++YG+ VQIV QDTGI E HP+H+HGY FY++A GFGN++P
Sbjct: 16865852 LYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNP 16865688
Score = 104 bits (221), Expect = 1e-021
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / -1
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 12895341 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 12895162
>dbj|AB010692.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18I23
Length = 72691
Score = 175 bits (377), Expect = 4e-043
Identities = 67/115 (58%), Positives = 85/115 (73%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH + IPGVFT DFP+ PPV FD+T N+ RA
Sbjct: 47678 CQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPSKPPVKFDYTGNNISRA 47857
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QPVKGT+LY+++YG+ VQ+V QDT I +E HP+H+HGY FY++ GFGN++P
Sbjct: 47858 LFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEGFGNFNP 48022
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 175 bits (377), Expect = 4e-043
Identities = 67/115 (58%), Positives = 85/115 (73%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH + IPGVFT DFP+ PPV FD+T N+ RA
Sbjct: 1515410 CQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPSKPPVKFDYTGNNISRA 1515589
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QPVKGT+LY+++YG+ VQ+V QDT I +E HP+H+HGY FY++ GFGN++P
Sbjct: 1515590 LFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEGFGNFNP 1515754
>ref|NM_120621.1| Arabidopsis thaliana copper ion binding AT5G05390 mRNA, complete cds
Length = 1698
Score = 175 bits (377), Expect = 4e-043
Identities = 67/115 (58%), Positives = 85/115 (73%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH + IPGVFT DFP+ PPV FD+T N+ RA
Sbjct: 1117 CQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPSKPPVKFDYTGNNISRA 1296
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QPVKGT+LY+++YG+ VQ+V QDT I +E HP+H+HGY FY++ GFGN++P
Sbjct: 1297 LFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEGFGNFNP 1461
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 175 bits (377), Expect = 4e-043
Identities = 67/115 (58%), Positives = 85/115 (73%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
CQG ASM VSF LP SLLQAH + IPGVFT DFP+ PPV FD+T N+ RA
Sbjct: 1596373 CQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPSKPPVKFDYTGNNISRA 1596552
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
L+QPVKGT+LY+++YG+ VQ+V QDT I +E HP+H+HGY FY++ GFGN++P
Sbjct: 1596553 LFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEGFGNFNP 1596717
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete
sequence
Length = 83796
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / +3
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 17376 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 17555
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +3
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 17208 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 17372
>gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9 map m283, complete
sequence
Length = 79272
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / -2
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 4043 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 3864
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / -2
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 4211 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 4047
>ref|NM_128574.1| Arabidopsis thaliana copper ion binding AT2G30210 mRNA, complete cds
Length = 2002
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 1297 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 1476
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 1129 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 1293
>emb|AX412603.1| Sequence 367 from Patent WO0222675
Length = 1713
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 1297 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 1476
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 1129 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 1293
>emb|AX507215.1| Sequence 1910 from Patent WO0216655
Length = 1713
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 1297 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 1476
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 1129 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 1293
>dbj|AK221241.1| Arabidopsis thaliana mRNA for putative laccase, complete cds,
clone: RAFL24-01-E24
Length = 875
Score = 104 bits (221), Expect(2) = 1e-036
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 250 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNP 429
Score = 70.3 bits (147), Expect(2) = 1e-036
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
P CQG ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 82 PRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 246
>gb|BH749209.1|BH749209 SALK_047455.54.75.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_047455.54.75.x,
DNA sequence
Length = 301
Score = 142 bits (305), Expect = 4e-033
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = -1 / -2
Query: 247 IPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEE 68
IPGVFT DFP+ PPV FD+T N+ RAL+QPVKGT+LY+++YG+ VQ+V QDT I +E
Sbjct: 252 IPGVFTTDFPSKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSEN 73
Query: 67 HPMHIHGYHFYVLATGFGNYDP 2
HP+H+HGY FY++ GFGN++P
Sbjct: 72 HPIHLHGYDFYIVGEGFGNFNP 7
>gb|BH749210.1|BH749210 SALK_047456.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_047456.56.00.x,
DNA sequence
Length = 302
Score = 142 bits (305), Expect = 4e-033
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = -1 / -3
Query: 247 IPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEE 68
IPGVFT DFP+ PPV FD+T N+ RAL+QPVKGT+LY+++YG+ VQ+V QDT I +E
Sbjct: 252 IPGVFTTDFPSKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSEN 73
Query: 67 HPMHIHGYHFYVLATGFGNYDP 2
HP+H+HGY FY++ GFGN++P
Sbjct: 72 HPIHLHGYDFYIVGEGFGNFNP 7
>gb|BX835965.1|BX835965 BX835965 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH39ZF07 3PRIM,
mRNA sequence
Length = 759
Score = 98.7 bits (209), Expect(2) = 1e-032
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -1 / -3
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP+KG + Y+++Y + VQIV Q+T I E HPMH+HGY FYV+ +GFGN++P
Sbjct: 595 NVSRGLWQPIKGKKAYKLKYKSNVQIVLQETRIVTPENHPMHLHGYQFYVVGSGFGNFNP 416
Score = 62.0 bits (129), Expect(2) = 1e-032
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -1 / -3
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
ASM +SF LP + S++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 727 ASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYT 599
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project)
Length = 104607
Score = 99.6 bits (211), Expect(3) = 2e-029
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = -1 / +3
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP +GT+ Y++++ + VQI+ QDT I E HPMH+HGY FYV+ TG GN++P
Sbjct: 16362 NVSRGLWQPTRGTKAYKLKFNSQVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNP 16541
Score = 36.3 bits (73), Expect(3) = 2e-029
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 241 GVFTDDFPALPPVFFDFT 188
GVFT DFP PPV FD+T
Sbjct: 16305 GVFTTDFPPTPPVTFDYT 16358
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / +3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
CQG AS+ VSF P S++QA+Y P
Sbjct: 16197 CQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGTP 16301
>ref|NM_120795.3| Arabidopsis thaliana copper ion binding AT5G07130 mRNA, complete cds
Length = 1803
Score = 99.6 bits (211), Expect(3) = 2e-029
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = -1 / +2
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP +GT+ Y++++ + VQI+ QDT I E HPMH+HGY FYV+ TG GN++P
Sbjct: 1292 NVSRGLWQPTRGTKAYKLKFNSQVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNP 1471
Score = 36.3 bits (73), Expect(3) = 2e-029
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 241 GVFTDDFPALPPVFFDFT 188
GVFT DFP PPV FD+T
Sbjct: 1235 GVFTTDFPPTPPVTFDYT 1288
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
CQG AS+ VSF P S++QA+Y P
Sbjct: 1127 CQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGTP 1231
>emb|BX831710.1|CNS09ZVI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH25ZC04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1768
Score = 99.6 bits (211), Expect(3) = 2e-029
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = -1 / +2
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
NV R LWQP +GT+ Y++++ + VQI+ QDT I E HPMH+HGY FYV+ TG GN++P
Sbjct: 1292 NVSRGLWQPTRGTKAYKLKFNSQVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNP 1471
Score = 36.3 bits (73), Expect(3) = 2e-029
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 241 GVFTDDFPALPPVFFDFT 188
GVFT DFP PPV FD+T
Sbjct: 1235 GVFTTDFPPTPPVTFDYT 1288
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
CQG AS+ VSF P S++QA+Y P
Sbjct: 1127 CQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGTP 1231
>gb|BV012013.1| MASC_STS13812 Arabidopsis thaliana (Lezoux/Puy-de-Dome-0 accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 604
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / -3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 302 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 147
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 506 CVGPLXXRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 348
>gb|BV012015.1| MASC_STS13810 Arabidopsis thaliana (Wassilewskija-0 accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 604
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / -3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 302 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 147
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 506 CVGPLXXRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 348
>gb|BV012010.1| MASC_STS13807 Arabidopsis thaliana (Gueckingen-0 accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 606
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / -2
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 305 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 150
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 509 CVGPLDXRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 351
>gb|BV012009.1| MASC_STS13814 Arabidopsis thaliana (C24 accession) genomic DNA
Arabidopsis thaliana STS genomic, sequence tagged site
Length = 610
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / -1
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 310 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 155
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -1 / -1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 514 CVGPLXXRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 356
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project)
Length = 118507
Score = 80.3 bits (169), Expect(2) = 3e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / -3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 14159 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 14004
Score = 79.4 bits (167), Expect(2) = 3e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / -2
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 9381 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 9226
Score = 74.4 bits (156), Expect(2) = 6e-021
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1 / +3
Query: 154 VKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
+K T+LY++ Y + VQ+V QDTG A E HP+H+HG++F+V+ G GNY+
Sbjct: 69522 MKATKLYKLPYNSTVQVVLQDTGNVAPENHPIHLHGFNFFVVGLGTGNYN 69671
Score = 58.8 bits (122), Expect(2) = 3e-026
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 14363 CVGPLDQRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 14205
Score = 56.5 bits (117), Expect(2) = 3e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 9582 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 9424
Score = 46.9 bits (96), Expect(2) = 6e-021
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 274 SLLQAHYHHIPGVFTDDFPALPPVFFDFTSQ 182
+LLQAHY ++ G++T DFPA P FDFT +
Sbjct: 69408 ALLQAHYFNLTGIYTTDFPAKPRRVFDFTGK 69500
>ref|NM_120182.2| Arabidopsis thaliana copper ion binding AT5G01050 mRNA, complete cds
Length = 1884
Score = 80.3 bits (169), Expect(2) = 3e-026
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1 / +1
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 1315 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 1470
Score = 58.8 bits (122), Expect(2) = 3e-026
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 1111 CVGPLDQRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 1269
>gb|BV012011.1| MASC_STS13811 Arabidopsis thaliana (Weiningen-0 accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 604
Score = 79.4 bits (167), Expect(2) = 3e-026
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + +R+ V+IV Q+TGI E HPMH+HG++FYVL GFGNYDP
Sbjct: 303 PERKTSVKTIRFXXTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDP 458
Score = 58.8 bits (122), Expect(2) = 3e-026
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -1 / +3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 99 CVGPLXXXLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 257
>gb|AU229348.1|AU229348 AU229348 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-C12 3',
mRNA sequence
Length = 507
Score = 79.4 bits (167), Expect(2) = 1e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / -3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 190 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 35
Score = 56.5 bits (117), Expect(2) = 1e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 391 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 233
>gb|BV012014.1| MASC_STS13808 Arabidopsis thaliana (Konchezero accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 604
Score = 77.1 bits (162), Expect(2) = 2e-025
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -1 / -3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYD
Sbjct: 302 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYD 150
Score = 58.8 bits (122), Expect(2) = 2e-025
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 506 CVGPLDQRLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 348
>gb|BV012012.1| MASC_STS13813 Arabidopsis thaliana (Cap Verde Islands-0 accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 606
Score = 77.1 bits (162), Expect(2) = 2e-025
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -1 / -2
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
P + T + +R+ + V+IV Q+TGI E HPMH+HG++FYVL GFGNYD
Sbjct: 305 PERKTSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYD 153
Score = 58.8 bits (122), Expect(2) = 2e-025
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I GV+TDDFP PP+ FDFT
Sbjct: 509 CVGPLXXXLAGSLNNRTFMIPERISMQEAYFYNITGVYTDDFPDQPPLKFDFT 351
>gb|AQ968416.1|AQ968416 LERJC35TF LERG Arabidopsis thaliana genomic clone LERJC35, DNA
sequence
Length = 662
Score = 79.4 bits (167), Expect(2) = 2e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / +3
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 345 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 500
Score = 56.5 bits (117), Expect(2) = 2e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / +3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 144 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 302
>ref|NM_120181.3| Arabidopsis thaliana copper ion binding AT5G01040 mRNA, complete cds
Length = 2371
Score = 79.4 bits (167), Expect(2) = 3e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / +2
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 1340 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 1495
Score = 56.5 bits (117), Expect(2) = 3e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 1139 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 1297
>dbj|AK117360.1| Arabidopsis thaliana At5g01040 mRNA for putative laccase, complete
cds, clone: RAFL16-93-C12
Length = 1627
Score = 79.4 bits (167), Expect(2) = 3e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / +1
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 1438 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 1593
Score = 56.5 bits (117), Expect(2) = 3e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 1237 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 1395
>dbj|AK176457.1| Arabidopsis thaliana mRNA for laccase -like protein, partial cds,
clone: RAFL24-23-C17
Length = 1627
Score = 79.4 bits (167), Expect(2) = 3e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / +1
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 1438 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 1593
Score = 56.5 bits (117), Expect(2) = 3e-025
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 1237 CIGPLGQRYAGSLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 1395
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence,
complete sequence
Length = 106688
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -1 / -1
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
K T +++ V++V Q+ + AAE HPMH+HG++F+VLA GFGNYDP
Sbjct: 24524 KSTSAKILKFNTTVEVVLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDP 24375
Score = 62.5 bits (130), Expect(2) = 5e-025
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNV 176
ASM SF LP +S+L+A +H + G+FT DFP PPV FD+T+ NV
Sbjct: 24698 ASMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNV 24558
>gb|AQ968417.1|AQ968417 LERJC35TR LERG Arabidopsis thaliana genomic clone LERJC35, DNA
sequence
Length = 538
Score = 79.4 bits (167), Expect(2) = 5e-025
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -1 / -2
Query: 157 PVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
P + T + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 318 PERKTSVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 163
Score = 54.7 bits (113), Expect(2) = 5e-025
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
C G S +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 519 CIGPLGQRYAGSHNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 361
>dbj|AK117639.1| Arabidopsis thaliana At3g09220 mRNA for putative laccase, complete
cds, clone: RAFL17-29-M06
Length = 1964
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -1 / +3
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
K T +++ V++V Q+ + AAE HPMH+HG++F+VLA GFGNYDP
Sbjct: 1383 KSTSAKILKFNTTVEVVLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDP 1532
Score = 62.5 bits (130), Expect(2) = 5e-025
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1 / +3
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNV 176
ASM SF LP +S+L+A +H + G+FT DFP PPV FD+T+ NV
Sbjct: 1209 ASMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNV 1349
>ref|NM_111756.2| Arabidopsis thaliana copper ion binding AT3G09220 mRNA, complete cds
Length = 1964
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -1 / +3
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
K T +++ V++V Q+ + AAE HPMH+HG++F+VLA GFGNYDP
Sbjct: 1383 KSTSAKILKFNTTVEVVLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDP 1532
Score = 62.5 bits (130), Expect(2) = 5e-025
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1 / +3
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNV 176
ASM SF LP +S+L+A +H + G+FT DFP PPV FD+T+ NV
Sbjct: 1209 ASMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNV 1349
>gb|BT004971.1| Arabidopsis thaliana clone U50490 putative laccase (diphenol oxidase)
(At3g09220) mRNA, complete cds
Length = 1735
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -1 / +1
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
K T +++ V++V Q+ + AAE HPMH+HG++F+VLA GFGNYDP
Sbjct: 1318 KSTSAKILKFNTTVEVVLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDP 1467
Score = 62.5 bits (130), Expect(2) = 5e-025
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1 / +1
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNV 176
ASM SF LP +S+L+A +H + G+FT DFP PPV FD+T+ NV
Sbjct: 1144 ASMSNHSFVLPKKLSILEAVFHDVKGIFTADFPDQPPVKFDYTNPNV 1284
>dbj|AB017064.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDN11
Length = 83373
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C+G ASM +SF P V +L+A+Y+HI GV+ FP PP+ F+FT++N P
Sbjct: 65696 CEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLF 65517
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGI 83
L P T + + +G VV++V Q T +
Sbjct: 65516 LETPRLATEVKVIEFGQVVELVIQGTSL 65433
Score = 47.8 bits (98), Expect(2) = 3e-024
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 70 EHPMHIHGYHFYVLATGFGNYD 5
+HPMH+HG+ FYV+ GFGNY+
Sbjct: 65417 DHPMHLHGFSFYVVGVGFGNYN 65352
>ref|NM_124184.2| Arabidopsis thaliana copper ion binding AT5G48100 mRNA, complete cds
Length = 2063
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C+G ASM +SF P V +L+A+Y+HI GV+ FP PP+ F+FT++N P
Sbjct: 1264 CEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLF 1443
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGI 83
L P T + + +G VV++V Q T +
Sbjct: 1444 LETPRLATEVKVIEFGQVVELVIQGTSL 1527
Score = 47.8 bits (98), Expect(2) = 3e-024
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 70 EHPMHIHGYHFYVLATGFGNYD 5
+HPMH+HG+ FYV+ GFGNY+
Sbjct: 1543 DHPMHLHGFSFYVVGVGFGNYN 1608
>gb|BT002919.1| Arabidopsis thaliana clone RAFL15-04-D21 (R20177) putative laccase
(diphenol oxidase) family protein (At5g48100) mRNA,
complete cds
Length = 1861
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C+G ASM +SF P V +L+A+Y+HI GV+ FP PP+ F+FT++N P
Sbjct: 1135 CEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLF 1314
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGI 83
L P T + + +G VV++V Q T +
Sbjct: 1315 LETPRLATEVKVIEFGQVVELVIQGTSL 1398
Score = 47.8 bits (98), Expect(2) = 3e-024
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 70 EHPMHIHGYHFYVLATGFGNYD 5
+HPMH+HG+ FYV+ GFGNY+
Sbjct: 1414 DHPMHLHGFSFYVVGVGFGNYN 1479
>gb|BT005152.1| Arabidopsis thaliana clone U20177 putative laccase (diphenol oxidase)
family protein (At5g48100) mRNA, complete cds
Length = 1729
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C+G ASM +SF P V +L+A+Y+HI GV+ FP PP+ F+FT++N P
Sbjct: 1102 CEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLF 1281
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGI 83
L P T + + +G VV++V Q T +
Sbjct: 1282 LETPRLATEVKVIEFGQVVELVIQGTSL 1365
Score = 47.8 bits (98), Expect(2) = 3e-024
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 70 EHPMHIHGYHFYVLATGFGNYD 5
+HPMH+HG+ FYV+ GFGNY+
Sbjct: 1381 DHPMHLHGFSFYVVGVGFGNYN 1446
>emb|CS130513.1| Sequence 31 from Patent WO2005063995
Length = 1473
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C+G ASM +SF P V +L+A+Y+HI GV+ FP PP+ F+FT++N P
Sbjct: 877 CEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLF 1056
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGI 83
L P T + + +G VV++V Q T +
Sbjct: 1057 LETPRLATEVKVIEFGQVVELVIQGTSL 1140
Score = 47.8 bits (98), Expect(2) = 3e-024
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1 / +1
Query: 70 EHPMHIHGYHFYVLATGFGNYD 5
+HPMH+HG+ FYV+ GFGNY+
Sbjct: 1156 DHPMHLHGFSFYVVGVGFGNYN 1221
>emb|BX832175.1|CNS0A10T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH57ZA08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1569
Score = 76.2 bits (160), Expect(2) = 1e-023
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -1 / +1
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
K + ++R+ + V+IV Q+T I + E HPMH+HG++FYVL GFGNYDP
Sbjct: 1339 KKASVKKIRFNSTVEIVLQNTAIISPESHPMHLHGFNFYVLGYGFGNYDP 1488
Score = 54.2 bits (112), Expect(2) = 1e-023
Identities = 17/42 (40%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 313 SMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
S+ +F +P+ +S+ +A++++I G++TDDFP PP+ FD+T
Sbjct: 1166 SLNNRTFMIPERISMQEAYFYNISGIYTDDFPNQPPLKFDYT 1291
>gb|BP804301.1|BP804301 BP804301 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-01-E24 5',
mRNA sequence
Length = 379
Score = 68.9 bits (144), Expect(3) = 4e-023
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = -1 / +3
Query: 181 NVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMH 56
NV R LWQP+KGT+ Y+++Y + VQIV QDT I E HPMH
Sbjct: 252 NVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMH 377
Score = 48.3 bits (99), Expect(3) = 4e-023
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 283 DTVSLLQAHYHHIPGVFTDDFPALPPVFFDFT 188
+ ++QA+Y PG+FT DFP +PPV FD+T
Sbjct: 153 EVTPVMQAYYQGTPGIFTTDFPPVPPVQFDYT 248
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1 / +2
Query: 352 PFCQGXXXXXXGASMXXVSFQLP 284
P CQG ASM +SF LP
Sbjct: 83 PACQGPNGTRFAASMNNMSFVLP 151
>dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M22
Length = 77758
Score = 73.9 bits (155), Expect(2) = 6e-021
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -1 / -1
Query: 154 VKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
+KGT+LYR+ Y A VQIV Q+T + ++ HP H+HG++F+ + G GN++P
Sbjct: 43048 MKGTKLYRLPYNATVQIVLQNTAMILSDNHPFHLHGFNFFEVGRGLGNFNP 42896
Score = 47.3 bits (97), Expect(2) = 6e-021
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1 / -1
Query: 274 SLLQAHYHHIPGVFTDDFPALPPVFFDFTS 185
+LLQAH+ +I GVFTDDFPA P +D+T+
Sbjct: 43168 ALLQAHFFNISGVFTDDFPAKPSNPYDYTA 43079
>ref|NM_120197.3| Arabidopsis thaliana copper ion binding AT5G01190 mRNA, complete cds
Length = 1821
Score = 74.4 bits (156), Expect(2) = 6e-021
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1 / +1
Query: 154 VKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
+K T+LY++ Y + VQ+V QDTG A E HP+H+HG++F+V+ G GNY+
Sbjct: 1288 MKATKLYKLPYNSTVQVVLQDTGNVAPENHPIHLHGFNFFVVGLGTGNYN 1437
Score = 46.9 bits (96), Expect(2) = 6e-021
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 274 SLLQAHYHHIPGVFTDDFPALPPVFFDFTSQ 182
+LLQAHY ++ G++T DFPA P FDFT +
Sbjct: 1174 ALLQAHYFNLTGIYTTDFPAKPRRVFDFTGK 1266
>gb|BT014855.1| Arabidopsis thaliana At5g01190 gene, complete cds
Length = 1677
Score = 74.4 bits (156), Expect(2) = 6e-021
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1 / +1
Query: 154 VKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
+K T+LY++ Y + VQ+V QDTG A E HP+H+HG++F+V+ G GNY+
Sbjct: 1288 MKATKLYKLPYNSTVQVVLQDTGNVAPENHPIHLHGFNFFVVGLGTGNYN 1437
Score = 46.9 bits (96), Expect(2) = 6e-021
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 274 SLLQAHYHHIPGVFTDDFPALPPVFFDFTSQ 182
+LLQAHY ++ G++T DFPA P FDFT +
Sbjct: 1174 ALLQAHYFNLTGIYTTDFPAKPRRVFDFTGK 1266
>ref|NM_125281.1| Arabidopsis thaliana copper ion binding AT5G58910 mRNA, complete cds
Length = 1572
Score = 73.9 bits (155), Expect(2) = 6e-021
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -1 / +1
Query: 154 VKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
+KGT+LYR+ Y A VQIV Q+T + ++ HP H+HG++F+ + G GN++P
Sbjct: 1183 MKGTKLYRLPYNATVQIVLQNTAMILSDNHPFHLHGFNFFEVGRGLGNFNP 1335
Score = 47.3 bits (97), Expect(2) = 6e-021
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1 / +1
Query: 274 SLLQAHYHHIPGVFTDDFPALPPVFFDFTS 185
+LLQAH+ +I GVFTDDFPA P +D+T+
Sbjct: 1063 ALLQAHFFNISGVFTDDFPAKPSNPYDYTA 1152
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 439,847,275
Number of Sequences: 1013581
Number of extensions: 5040708
Number of successful extensions: 189805
Number of sequences better than 1.0e-020: 71
length of database: 302,980,290
effective HSP length: 53
effective length of database: 249,260,497
effective search space used: 15703411311
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)