TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF332176.2.1
(912 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS ... 103 7e-055
gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R2... 100 2e-048
ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS ... 100 2e-048
emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cD... 100 2e-048
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 63 5e-048
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 63 6e-048
gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis tha... 63 6e-048
gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6)... 51 7e-034
gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, comp... 91 1e-032
ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS ... 91 1e-032
gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R2... 91 1e-032
gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRN... 91 1e-032
gb|BT005024.1| Arabidopsis thaliana clone U20717 putative b... 91 1e-032
emb|AX589887.1| Sequence 69 from Patent WO02081695 91 1e-032
emb|AX652050.1| Sequence 948 from Patent WO03000898 91 1e-032
emb|CQ805662.1| Sequence 2073 from Patent WO2004035798 91 1e-032
ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS ... 81 5e-031
gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, compl... 81 5e-031
gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/... 81 5e-031
gb|AY133801.1| Arabidopsis thaliana clone U10238 putative b... 81 5e-031
gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II s... 57 3e-029
ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS ... 53 2e-028
emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cD... 81 9e-027
gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADI... 81 9e-026
emb|AL049803.1|F26K10 Arabidopsis thaliana clone F26K10, **... 59 1e-021
emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome ... 47 6e-021
gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H1... 56 6e-021
>ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)
AT1G65680 (ATEXPB2) mRNA, complete cds
Length = 822
Score = 103 bits (220), Expect(4) = 7e-055
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSGTAFGAMA + +LR+ G + I +K+V C Y G TVTF +++GSN N AVLV
Sbjct: 397 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLV 576
Query: 392 EYENGDGDVVQVDLMESSPDD 454
Y NGDG++ +++L ++ D
Sbjct: 577 AYVNGDGEIGRIELKQALDSD 639
Score = 75.3 bits (158), Expect(4) = 7e-055
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V PPFS M S G +FK GKGCG+CYQ++C + ACS TV+IT
Sbjct: 184 GSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVIT 363
Query: 182 D 184
D
Sbjct: 364 D 366
Score = 48.3 bits (99), Expect(4) = 7e-055
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 473 WEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
W M +SWG++W++D PL+ P SLRVT+
Sbjct: 643 WLSMSQSWGAVWKLDVSSPLRAPLSLRVTS 732
Score = 46.4 bits (95), Expect(4) = 7e-055
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQF 646
ESGKT+VA VIPA+WQP +Y S V F
Sbjct: 736 ESGKTVVASNVIPANWQPGAIYKSNVNF 819
>gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R20474) putative
beta-expansin (At2g45110) mRNA, complete cds
Length = 977
Score = 100 bits (213), Expect(4) = 2e-048
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2 / +3
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAV 385
P H DLSG A GA+AK D+LR AG+I + +KR C Y G + F ++ G+NP Y++
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISF 608
Query: 386 LVEYENGDGDVVQVDL 433
+VEYENGDGD+ V++
Sbjct: 609 VVEYENGDGDLSNVEI 656
Score = 76.7 bits (161), Expect(4) = 2e-048
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = +2 / +3
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V PP AM S G +F +GKGCG+CYQ+ C HPACSG TV IT
Sbjct: 216 GSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTIT 395
Query: 182 D 184
D
Sbjct: 396 D 398
Score = 42.8 bits (87), Expect(4) = 2e-048
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
+ ES K +VA VIPA+W+PD Y SIV F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 31.8 bits (63), Expect(4) = 2e-048
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +2 / +3
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M+E ++W++++ L+GPF++R+T+
Sbjct: 669 GSFISMQEMRSAVWKVNSGSALRGPFNIRLTS 764
>ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
AT2G45110 (ATEXPB4) mRNA, complete cds
Length = 956
Score = 100 bits (213), Expect(4) = 2e-048
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2 / +3
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAV 385
P H DLSG A GA+AK D+LR AG+I + +KR C Y G + F ++ G+NP Y++
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISF 608
Query: 386 LVEYENGDGDVVQVDL 433
+VEYENGDGD+ V++
Sbjct: 609 VVEYENGDGDLSNVEI 656
Score = 76.7 bits (161), Expect(4) = 2e-048
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = +2 / +3
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V PP AM S G +F +GKGCG+CYQ+ C HPACSG TV IT
Sbjct: 216 GSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTIT 395
Query: 182 D 184
D
Sbjct: 396 D 398
Score = 42.8 bits (87), Expect(4) = 2e-048
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
+ ES K +VA VIPA+W+PD Y SIV F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 31.8 bits (63), Expect(4) = 2e-048
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +2 / +3
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M+E ++W++++ L+GPF++R+T+
Sbjct: 669 GSFISMQEMRSAVWKVNSGSALRGPFNIRLTS 764
>emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL25ZE08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 923
Score = 100 bits (213), Expect(4) = 2e-048
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2 / +2
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAV 385
P H DLSG A GA+AK D+LR AG+I + +KR C Y G + F ++ G+NP Y++
Sbjct: 398 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISF 577
Query: 386 LVEYENGDGDVVQVDL 433
+VEYENGDGD+ V++
Sbjct: 578 VVEYENGDGDLSNVEI 625
Score = 76.7 bits (161), Expect(4) = 2e-048
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = +2 / +2
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V PP AM S G +F +GKGCG+CYQ+ C HPACSG TV IT
Sbjct: 185 GSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTIT 364
Query: 182 D 184
D
Sbjct: 365 D 367
Score = 42.8 bits (87), Expect(4) = 2e-048
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
+ ES K +VA VIPA+W+PD Y SIV F
Sbjct: 731 SGESHKVIVAYNVIPANWKPDESYRSIVNF 820
Score = 31.8 bits (63), Expect(4) = 2e-048
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M+E ++W++++ L+GPF++R+T+
Sbjct: 638 GSFISMQEMRSAVWKVNSGSALRGPFNIRLTS 733
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 63.4 bits (132), Expect(6) = 5e-048
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2 / +2
Query: 308 RVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSPDD 454
RV C Y G TVTF +++GSN N AVLV Y NGDG++ +++L ++ D
Sbjct: 8669384 RVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 8669530
Score = 53.8 bits (111), Expect(6) = 5e-048
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 11 GGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQI 127
GG V PPFS M S G +FK GKGCG+CYQ+
Sbjct: 8668883 GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 8668999
Score = 48.3 bits (99), Expect(6) = 5e-048
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2 / +2
Query: 473 WEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
W M +SWG++W++D PL+ P SLRVT+
Sbjct: 8669534 WLSMSQSWGAVWKLDVSSPLRAPLSLRVTS 8669623
Score = 46.4 bits (95), Expect(6) = 5e-048
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQF 646
ESGKT+VA VIPA+WQP +Y S V F
Sbjct: 8669627 ESGKTVVASNVIPANWQPGAIYKSNVNF 8669710
Score = 45.5 bits (93), Expect(6) = 5e-048
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSGTAFGAMA + +LR+ G + I +K+
Sbjct: 8669171 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 8669269
Score = 27.2 bits (53), Expect(6) = 5e-048
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 122 QIRCKAHPACSGVAETVIITD 184
Q++C + ACS TV+ITD
Sbjct: 8669078 QVKCTSKSACSKNPVTVVITD 8669140
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 63.4 bits (132), Expect(6) = 6e-048
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 308 RVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSPDD 454
RV C Y G TVTF +++GSN N AVLV Y NGDG++ +++L ++ D
Sbjct: 107140 RVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 107286
Score = 53.8 bits (111), Expect(6) = 6e-048
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 11 GGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQI 127
GG V PPFS M S G +FK GKGCG+CYQ+
Sbjct: 106639 GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 106755
Score = 48.3 bits (99), Expect(6) = 6e-048
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 473 WEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
W M +SWG++W++D PL+ P SLRVT+
Sbjct: 107290 WLSMSQSWGAVWKLDVSSPLRAPLSLRVTS 107379
Score = 46.4 bits (95), Expect(6) = 6e-048
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQF 646
ESGKT+VA VIPA+WQP +Y S V F
Sbjct: 107383 ESGKTVVASNVIPANWQPGAIYKSNVNF 107466
Score = 45.5 bits (93), Expect(6) = 6e-048
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSGTAFGAMA + +LR+ G + I +K+
Sbjct: 106927 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 107025
Score = 27.2 bits (53), Expect(6) = 6e-048
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 122 QIRCKAHPACSGVAETVIITD 184
Q++C + ACS TV+ITD
Sbjct: 106834 QVKCTSKSACSKNPVTVVITD 106896
>gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis thaliana BAC F1E22, complete sequence
Length = 92356
Score = 63.4 bits (132), Expect(6) = 6e-048
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2 / +3
Query: 308 RVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSPDD 454
RV C Y G TVTF +++GSN N AVLV Y NGDG++ +++L ++ D
Sbjct: 25587 RVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 25733
Score = 53.8 bits (111), Expect(6) = 6e-048
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 11 GGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQI 127
GG V PPFS M S G +FK GKGCG+CYQ+
Sbjct: 25086 GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 25202
Score = 52.4 bits (108), Expect(6) = 2e-027
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 311 VPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDL 433
V C Y + F ++ G+NP Y++ +VEYENGDGD+ +++
Sbjct: 27864 VECLYRRTNIAFRMDPGANPYYISFVVEYENGDGDLAYIEI 27986
Score = 48.3 bits (99), Expect(6) = 6e-048
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2 / +3
Query: 473 WEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
W M +SWG++W++D PL+ P SLRVT+
Sbjct: 25737 WLSMSQSWGAVWKLDVSSPLRAPLSLRVTS 25826
Score = 46.9 bits (96), Expect(6) = 2e-027
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
P HFDLSG A GA+A+ D LR AG++ + ++R
Sbjct: 27551 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRR 27655
Score = 46.4 bits (95), Expect(6) = 6e-048
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQF 646
ESGKT+VA VIPA+WQP +Y S V F
Sbjct: 25830 ESGKTVVASNVIPANWQPGAIYKSNVNF 25913
Score = 45.5 bits (93), Expect(6) = 6e-048
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSGTAFGAMA + +LR+ G + I +K+
Sbjct: 25374 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 25472
Score = 40.0 bits (81), Expect(6) = 2e-027
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQFE**YM 661
ES K ++A VIPA+W+P+ Y S+V F+* ++
Sbjct: 28098 ESHKVVLAYNVIPANWKPNETYRSVVNFK*SFL 28196
Score = 39.6 bits (80), Expect(6) = 2e-027
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 47 PPFSAMTSCGNEPIFKDGKGCGSCYQI 127
PP M S G +F +G GCG+C+Q+
Sbjct: 27007 PPLYGMVSAGGPSVFNNGIGCGTCFQV 27087
Score = 38.6 bits (78), Expect(6) = 2e-027
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLV 583
G + PM+E ++W++ + PL GPF++R+T+ +V
Sbjct: 27999 GEFIPMQEMRSAVWKISSGSPLTGPFNIRLTSAESHKVV 28115
Score = 34.5 bits (69), Expect(6) = 2e-027
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 119 YQIRCKAHPACSGVAETVIITD 184
YQI C HPACS TV ITD
Sbjct: 27455 YQILCNGHPACSRRPITVTITD 27520
Score = 27.2 bits (53), Expect(6) = 6e-048
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 122 QIRCKAHPACSGVAETVIITD 184
Q++C + ACS TV+ITD
Sbjct: 25281 QVKCTSKSACSKNPVTVVITD 25343
>gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6) gene, complete cds
Length = 2504
Score = 51.0 bits (105), Expect(6) = 7e-034
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 311 VPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDL 433
V C Y + F ++ G+NP Y++ +VEYENGDGD+ ++
Sbjct: 2179 VECLYRRTNIAFRMDPGANPYYISFVVEYENGDGDLAYTEI 2301
Score = 44.6 bits (91), Expect(6) = 7e-034
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2 / +2
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
P HFDLSG A GA+A+ D LR AG++ + + R
Sbjct: 1865 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYIR 1969
Score = 40.5 bits (82), Expect(6) = 7e-034
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLV 583
G + PM+E ++W++++ PL GPF++R+T+ +V
Sbjct: 2314 GTFIPMQEMRSAVWKVNSGSPLTGPFNIRLTSAESHNVV 2430
Score = 39.6 bits (80), Expect(6) = 7e-034
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 47 PPFSAMTSCGNEPIFKDGKGCGSCYQI 127
PP M S G +F +G GCG+C+Q+
Sbjct: 1319 PPLYGMVSAGGPSVFNNGIGCGTCFQV 1399
Score = 38.6 bits (78), Expect(6) = 7e-034
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 563 ESGKTLVADQVIPADWQPDNVYSSIVQFE* 652
ES +VA VIPA+W+P+ Y S+V F+*
Sbjct: 2413 ESHNVVVAYNVIPANWKPNETYRSVVNFK* 2502
Score = 34.5 bits (69), Expect(6) = 7e-034
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 119 YQIRCKAHPACSGVAETVIITD 184
YQI C HPACS TV ITD
Sbjct: 1769 YQILCNGHPACSRRPITVTITD 1834
>gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, complete sequence
Length = 1137
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 628
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 629 EYEDGEGDIGSMHIRQA 679
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +2
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 227 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 406
Query: 182 DMN 190
D +
Sbjct: 407 DQS 415
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
>ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)
AT2G20750 (ATEXPB1) mRNA, complete cds
Length = 1137
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 628
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 629 EYEDGEGDIGSMHIRQA 679
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +2
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 227 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 406
Query: 182 DMN 190
D +
Sbjct: 407 DQS 415
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
>gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R20717) putative
beta-expansin pollen allergen protein (At2g20750) mRNA,
complete cds
Length = 1124
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 447 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 626
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 627 EYEDGEGDIGSMHIRQA 677
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 225 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 404
Query: 182 DMN 190
D +
Sbjct: 405 DQS 413
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 774 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 863
>gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRNA, partial cds
Length = 1037
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 351 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 530
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 531 EYEDGEGDIGSMHIRQA 581
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 129 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 308
Query: 182 DMN 190
D +
Sbjct: 309 DQS 317
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 678 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 767
>gb|BT005024.1| Arabidopsis thaliana clone U20717 putative beta-expansin pollen
allergen protein (At2g20750) mRNA, complete cds
Length = 847
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 564
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 565 EYEDGEGDIGSMHIRQA 615
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 163 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 342
Query: 182 DMN 190
D +
Sbjct: 343 DQS 351
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|AX589887.1| Sequence 69 from Patent WO02081695
Length = 816
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 564
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 565 EYEDGEGDIGSMHIRQA 615
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 163 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 342
Query: 182 DMN 190
D +
Sbjct: 343 DQS 351
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|AX652050.1| Sequence 948 from Patent WO03000898
Length = 816
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 564
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 565 EYEDGEGDIGSMHIRQA 615
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 163 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 342
Query: 182 DMN 190
D +
Sbjct: 343 DQS 351
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|CQ805662.1| Sequence 2073 from Patent WO2004035798
Length = 816
Score = 91.3 bits (193), Expect(3) = 1e-032
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG AFG MA HN +R+ G+++I ++R C+Y G + FH+ GS +L++L+
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLI 564
Query: 392 EYENGDGDVVQVDLMES 442
EYE+G+GD+ + + ++
Sbjct: 565 EYEDGEGDIGSMHIRQA 615
Score = 57.0 bits (118), Expect(3) = 1e-032
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIIT 181
G GG V++ PF A + +FK G+GCG+CY++RC CS A T+I T
Sbjct: 163 GSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIAT 342
Query: 182 DMN 190
D +
Sbjct: 343 DQS 351
Score = 32.2 bits (64), Expect(3) = 1e-032
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)
AT4G28250 (ATEXPB3) mRNA, complete cds
Length = 1299
Score = 81.3 bits (171), Expect(3) = 5e-031
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLV 639
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 640 EFEDGEGDIGSMHIRQA 690
Score = 58.3 bits (121), Expect(3) = 5e-031
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 283 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 35.4 bits (71), Expect(3) = 5e-031
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
>gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, complete sequence
Length = 1257
Score = 81.3 bits (171), Expect(3) = 5e-031
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 465 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLV 644
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 645 EFEDGEGDIGSMHIRQA 695
Score = 58.3 bits (121), Expect(3) = 5e-031
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2 / +3
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 288 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 434
Score = 35.4 bits (71), Expect(3) = 5e-031
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 792 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 881
>gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/allergen protein
(At4g28250) mRNA, complete cds
Length = 1216
Score = 81.3 bits (171), Expect(3) = 5e-031
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLV 639
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 640 EFEDGEGDIGSMHIRQA 690
Score = 58.3 bits (121), Expect(3) = 5e-031
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 283 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 35.4 bits (71), Expect(3) = 5e-031
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
>gb|AY133801.1| Arabidopsis thaliana clone U10238 putative beta-expansin/allergen
protein (At4g28250) mRNA, complete cds
Length = 826
Score = 81.3 bits (171), Expect(3) = 5e-031
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 364 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLV 543
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 544 EFEDGEGDIGSMHIRQA 594
Score = 58.3 bits (121), Expect(3) = 5e-031
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 187 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 333
Score = 35.4 bits (71), Expect(3) = 5e-031
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 691 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 780
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
sequence. Sequence from clones T13E15, T14P1
Length = 87885
Score = 57.0 bits (118), Expect(5) = 3e-029
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2 / +2
Query: 8 VGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDM 187
VGG V PP AM S G +F +GKGCG+CYQ+R + A + V ++I+ +
Sbjct: 65468 VGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVRMNVYRARAIVIYVLLISFI 65647
Query: 188 NYY 196
N +
Sbjct: 65648 NAF 65656
Score = 55.1 bits (114), Expect(5) = 3e-029
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2 / +2
Query: 317 CQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDL 433
C Y G + F ++ G+NP Y++ +VEYENGDGD+ V++
Sbjct: 66551 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEI 66667
Score = 48.7 bits (100), Expect(5) = 3e-029
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 206 PYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
P H DLSG A GA+AK D+LR AG+I + +KR
Sbjct: 66078 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKR 66182
Score = 42.8 bits (87), Expect(5) = 3e-029
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
+ ES K +VA VIPA+W+PD Y SIV F
Sbjct: 66773 SGESHKVIVAYNVIPANWKPDESYRSIVNF 66862
Score = 31.8 bits (63), Expect(5) = 3e-029
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M+E ++W++++ L+GPF++R+T+
Sbjct: 66680 GSFISMQEMRSAVWKVNSGSALRGPFNIRLTS 66775
>ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)
AT3G60570 (ATEXPB5) mRNA, complete cds
Length = 759
Score = 53.3 bits (110), Expect(5) = 2e-028
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2 / +1
Query: 2 GRVGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
G GG V P+ M S G +FKDGKGCG+CY+++C
Sbjct: 145 GTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKC 276
Score = 40.5 bits (82), Expect(5) = 2e-028
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAG 286
HFDLSG AFGA+AK D+LR+ G
Sbjct: 355 HFDLSGKAFGALAKRGKGDQLRNLG 429
Score = 37.3 bits (75), Expect(5) = 2e-028
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 338 VTFHIERGSNPNYLAVLVEYENGDGDVVQVDL 433
+ H++ G+NP Y++ V++ NGDG+ +++
Sbjct: 445 IAIHVDAGANPYYMSFAVKFANGDGNFACIEV 540
Score = 35.4 bits (71), Expect(5) = 2e-028
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2 / +1
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M E ++WR+ PL+GPF++R+T+
Sbjct: 553 GQYMKMEEMRSAVWRLSPGVPLKGPFNIRLTS 648
Score = 34.1 bits (68), Expect(5) = 2e-028
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 566 SGKTLVADQVIPADWQPDNVYSSIVQF 646
SGK ++A VIP W P +Y S V F
Sbjct: 655 SGKKIIAKGVIPEKWSPGAIYHSKVNF 735
>emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB87ZG06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1257
Score = 81.3 bits (171), Expect(4) = 9e-027
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSMLV 628
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 629 EFEDGEGDIGSMHIRQA 679
Score = 35.4 bits (71), Expect(4) = 9e-027
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 776 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 865
Score = 33.1 bits (66), Expect(4) = 9e-027
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 113 SCYQIRCKAHPACSGVAETVIITD 184
+CY++RC CS A TVIITD
Sbjct: 347 TCYKVRCLDKSICSRRAVTVIITD 418
Score = 28.1 bits (55), Expect(4) = 9e-027
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCG 112
V++ P A N +FK+G+GCG
Sbjct: 273 VDVKPLHARVGAVNPILFKNGEGCG 347
>gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M153Q 5-PRIME, mRNA sequence
Length = 816
Score = 81.3 bits (171), Expect(2) = 9e-026
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSG FG +A + LR+ G+I + ++R C+Y G + FH+ GS +L++LV
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLV 628
Query: 392 EYENGDGDVVQVDLMES 442
E+E+G+GD+ + + ++
Sbjct: 629 EFEDGEGDIGSMHIRQA 679
Score = 58.3 bits (121), Expect(2) = 9e-026
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2 / +2
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 272 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 418
>emb|AL049803.1|F26K10 Arabidopsis thaliana clone F26K10, *** SEQUENCING IN PROGRESS ***
Length = 49311
Score = 59.3 bits (123), Expect(4) = 1e-021
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +2 / -3
Query: 8 VGGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITD 184
VGG V++ P A N +FK+G+GCG+CY++RC CS A TVIITD
Sbjct: 28456 VGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 28280
Score = 51.9 bits (107), Expect(4) = 1e-021
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2 / -2
Query: 305 KRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDV 418
KR C+Y G + FH+ GS +L++LVE+E+G+GD+
Sbjct: 27848 KRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDI 27735
Score = 36.3 bits (73), Expect(4) = 1e-021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / -3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSG FG +A + LR+ G+I + ++R
Sbjct: 28249 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRR 28151
Score = 35.4 bits (71), Expect(4) = 1e-021
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / -3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T +GKTL A V+P +W P YSS + F
Sbjct: 27313 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 27224
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10
Length = 103787
Score = 46.9 bits (96), Expect(5) = 6e-021
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2 / +2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSG AFGA+AK D+LR+ G + + +KR
Sbjct: 93335 HFDLSGKAFGALAKRGKGDQLRNLGELKVSYKR 93433
Score = 46.4 bits (95), Expect(5) = 6e-021
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 11 GGGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQI 127
GG V P+ M S G +FKDGKGCG+CY++
Sbjct: 93047 GGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRV 93163
Score = 44.1 bits (90), Expect(5) = 6e-021
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 317 CQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDL 433
C++P + H++ G+NP Y++ V++ NGDG+ +++
Sbjct: 93675 CKHPKTMIAIHVDAGANPYYMSFAVKFANGDGNFACIEV 93791
Score = 35.4 bits (71), Expect(5) = 6e-021
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
G + M E ++WR+ PL+GPF++R+T+
Sbjct: 93804 GQYMKMEEMRSAVWRLSPGVPLKGPFNIRLTS 93899
Score = 34.1 bits (68), Expect(5) = 6e-021
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +3
Query: 566 SGKTLVADQVIPADWQPDNVYSSIVQF 646
SGK ++A VIP W P +Y S V F
Sbjct: 93906 SGKKIIAKGVIPEKWSPGAIYHSKVNF 93986
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
sequence
Length = 129667
Score = 56.1 bits (116), Expect(4) = 6e-021
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2 / -2
Query: 38 VNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMN 190
V++ PF A + +FK G+GCG+CY++RC CS A T+I TD +
Sbjct: 90201 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 90049
Score = 51.0 bits (105), Expect(4) = 6e-021
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 308 RVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDV 418
R C+Y G + FH+ GS +L++L+EYE+G+GD+
Sbjct: 89685 RTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDI 89575
Score = 45.1 bits (92), Expect(4) = 6e-021
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2 / -2
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKR 310
HFDLSG AFG MA HN +R+ G+++I ++R
Sbjct: 90015 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRR 89917
Score = 32.2 bits (64), Expect(4) = 6e-021
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / -3
Query: 557 TNESGKTLVADQVIPADWQPDNVYSSIVQF 646
T + KTL A VIP++W P Y+S + F
Sbjct: 89372 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 89283
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,412,761,208
Number of Sequences: 1013581
Number of extensions: 17071402
Number of successful extensions: 135468
Number of sequences better than 1.0e-020: 28
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 60816279238
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)