TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021176.2.1
(1318 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_112830.2| Arabidopsis thaliana structural constituen... 137 1e-080
dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosom... 136 4e-070
gb|AV552923.1|AV552923 AV552923 Arabidopsis thaliana roots ... 108 7e-054
dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosom... 104 1e-053
gb|BT011223.1| Arabidopsis thaliana 102 1e-053
ref|NM_125445.1| Arabidopsis thaliana unknown protein AT5G6... 102 1e-053
ref|NM_124817.2| Arabidopsis thaliana unknown protein AT5G5... 114 2e-053
gb|BT023723.1| Arabidopsis thaliana At5g54370 mRNA, complet... 114 2e-053
emb|CQ805856.1| Sequence 2267 from Patent WO2004035798 114 2e-053
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 143 3e-052
gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BA... 143 3e-052
gb|AC064840.2|AC064840 Arabidopsis thaliana chromosome I BA... 143 3e-052
ref|NM_104362.2| Arabidopsis thaliana unknown protein AT1G5... 143 3e-052
ref|NM_125446.2| Arabidopsis thaliana unknown protein AT5G6... 104 4e-049
gb|BT000598.1| Arabidopsis thaliana late embryonic abundant... 104 4e-049
gb|AY054263.1| Arabidopsis thaliana AT5g60530/muf9_180 mRNA... 104 1e-048
gb|AY142522.1| Arabidopsis thaliana unknown protein (At4g27... 103 1e-048
ref|NM_118874.2| Arabidopsis thaliana unknown protein AT4G2... 103 1e-048
emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome... 103 1e-042
emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome ... 103 1e-042
emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosom... 103 6e-042
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 103 2e-038
gb|AV543918.1|AV543918 AV543918 Arabidopsis thaliana roots ... 137 4e-036
gb|AV546945.1|AV546945 AV546945 Arabidopsis thaliana roots ... 127 3e-033
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 143 1e-032
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 136 2e-030
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 136 2e-030
gb|AV552371.1|AV552371 AV552371 Arabidopsis thaliana roots ... 88 3e-030
dbj|AP000380.1| Arabidopsis thaliana genomic DNA, chromosom... 114 2e-029
gb|CW841669.1|CW841669 ET11466.Ds3.04.02.2003.jw87.708 Arab... 76 7e-028
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 114 8e-024
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 114 8e-024
emb|AJ834201.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834511.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834512.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834513.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834514.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834515.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
emb|AJ834516.1| Arabidopsis thaliana T-DNA flanking sequenc... 65 7e-023
gb|AI998070.1|AI998070 701515527 A. thaliana, Columbia Col-... 109 2e-022
>ref|NM_112830.2| Arabidopsis thaliana structural constituent of cell wall AT3G19430
mRNA, complete cds
Length = 1878
Score = 137 bits (294), Expect(5) = 1e-080
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = +1 / +1
Query: 715 NGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQ 894
N + V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQ
Sbjct: 1279 NNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQ 1458
Query: 895 TYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
TYRS+YV+R + MP MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 1459 TYRSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNN 1602
Score = 88.1 bits (186), Expect(5) = 1e-080
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
GM+RDFTW+Q+IA+LF H LYVGA KTA WDD VDR+ ++ DG + L A WTS
Sbjct: 1051 GMARDFTWVQSIAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTS 1227
Score = 87.7 bits (185), Expect(5) = 1e-080
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG++D++FC++SD +LHINAHFIGK A
Sbjct: 919 CQDPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRA 1050
Score = 76.7 bits (161), Expect(5) = 3e-040
Identities = 45/102 (44%), Positives = 62/102 (60%)
Frame = -3 / -2
Query: 1007 ATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCA 828
A QS AK V LSPP+ G+ RLT* + V P TP T ++ + NLK RSR A
Sbjct: 1571 AAEQSGAKSPVV*NSLSPPITGMWTPILTRLT*LDL*VCPKTPSTLSLRSWNLKPRSR*A 1392
Query: 827 RQSSAVTPYRCTLDSSSVMGTALALMVNLPSSETSTPLAALV 702
RQSS+ T L+SS V+GT LA++++ PS+ TS L +++
Sbjct: 1391 RQSSSFTS*PWILESSIVIGTTLAVILSKPSTSTSRLLVSVL 1266
Score = 56.1 bits (116), Expect(5) = 3e-040
Identities = 27/39 (69%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK ALM R SE QK S PWK*K PSPPMKRGS
Sbjct: 1040 LPMK*ALM*RLGSEIRQKLESFLPWK*KVRPSPPMKRGS 924
Score = 48.3 bits (99), Expect(5) = 3e-040
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -2 / -1
Query: 630 LAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGH 499
++V+ + + V+ ++PRG L G+DV V+ EE+G+GLDP EV H
Sbjct: 1185 ISVERDGNPVNGIIPRGSL*GSDV*TVSAEEYGNGLDPCEVTCH 1054
Score = 37.3 bits (75), Expect(5) = 1e-080
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 1066 EIAGITCASGMGGQGVVCKK* 1128
E+ ++CASG+GG+GVVCK+*
Sbjct: 1618 ELPEMSCASGLGGKGVVCKR* 1680
Score = 32.7 bits (65), Expect(5) = 3e-040
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 1133 LGYFLHTTPWPPMPLAQVMPAISDTI 1056
+ Y L TTP PP PLAQ++ S+ +
Sbjct: 1685 VSYLLQTTPLPPKPLAQLISGSSNLL 1608
Score = 29.0 bits (57), Expect(5) = 1e-080
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1 / +1
Query: 235 RPRKLYPYCPGKPMECPAECSQSCYAD 315
R +K C G CPA+C +SC D
Sbjct: 790 RCKKQRSPCYGVEYTCPADCPRSCQVD 870
Score = 28.1 bits (55), Expect(5) = 3e-040
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3 / -2
Query: 356 PGTLHTQTGLQELQSA*HDWEHSAGHSIGLP 264
PG QTGLQ QS * + SAG P
Sbjct: 911 PGLSQLQTGLQVTQST*QERGQSAGQVYSTP 819
>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14
Length = 83097
Score = 136 bits (291), Expect(5) = 4e-070
Identities = 55/106 (51%), Positives = 72/106 (67%)
Frame = +1 / -2
Query: 721 VLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTY 900
+ V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQTY
Sbjct: 50003 IQVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQTY 49824
Query: 901 RSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
RS+YV+R + MP MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 49823 RSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNN 49686
Score = 88.1 bits (186), Expect(5) = 4e-070
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / -3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
GM+RDFTW+Q+IA+LF H LYVGA KTA WDD VDR+ ++ DG + L A WTS
Sbjct: 50413 GMARDFTWVQSIAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTS 50237
Score = 87.7 bits (185), Expect(5) = 4e-070
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +1 / -3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG++D++FC++SD +LHINAHFIGK A
Sbjct: 50545 CQDPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRA 50414
Score = 73.5 bits (154), Expect(4) = 3e-028
Identities = 43/94 (45%), Positives = 57/94 (60%)
Frame = -3 / +1
Query: 1007 ATAQSAAKRLDVV*LLSPPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCA 828
A QS AK V LSPP+ G+ RLT* + V P TP T ++ + NLK RSR A
Sbjct: 49717 AAEQSGAKSPVV*NSLSPPITGMWTPILTRLT*LDL*VCPKTPSTLSLRSWNLKPRSR*A 49896
Query: 827 RQSSAVTPYRCTLDSSSVMGTALALMVNLPSSET 726
RQSS+ T L+SS V+GT LA++++ PS+ T
Sbjct: 49897 RQSSSFTS*PWILESSIVIGTTLAVILSKPSTST 49998
Score = 56.1 bits (116), Expect(4) = 3e-028
Identities = 27/39 (69%), Positives = 27/39 (69%)
Frame = -3 / +3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK*KALPSPPMKRGS 366
LPMK ALM R SE QK S PWK*K PSPPMKRGS
Sbjct: 50424 LPMK*ALM*RLGSEIRQKLESFLPWK*KVRPSPPMKRGS 50540
Score = 48.3 bits (99), Expect(4) = 3e-028
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -2 / +2
Query: 630 LAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGH 499
++V+ + + V+ ++PRG L G+DV V+ EE+G+GLDP EV H
Sbjct: 50279 ISVERDGNPVNGIIPRGSL*GSDV*TVSAEEYGNGLDPCEVTCH 50410
Score = 37.3 bits (75), Expect(5) = 4e-070
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1 / -2
Query: 1066 EIAGITCASGMGGQGVVCKK* 1128
E+ ++CASG+GG+GVVCK+*
Sbjct: 49670 ELPEMSCASGLGGKGVVCKR* 49608
Score = 32.7 bits (65), Expect(4) = 3e-028
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3 / +1
Query: 1133 LGYFLHTTPWPPMPLAQVMPAISDTI 1056
+ Y L TTP PP PLAQ++ S+ +
Sbjct: 49603 VSYLLQTTPLPPKPLAQLISGSSNLL 49680
Score = 29.0 bits (57), Expect(5) = 4e-070
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1 / -3
Query: 235 RPRKLYPYCPGKPMECPAECSQSCYAD 315
R +K C G CPA+C +SC D
Sbjct: 50767 RCKKQRSPCYGVEYTCPADCPRSCQVD 50687
>gb|AV552923.1|AV552923 AV552923 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ49b06R 5', mRNA sequence
Length = 561
Score = 108 bits (231), Expect(3) = 7e-054
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = +1 / +3
Query: 715 NGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQ 894
N + V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQ
Sbjct: 318 NNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQ 497
Query: 895 TYRSDYVNRFDVKASMPTMGG 957
TYRS+YV+R + MP MGG
Sbjct: 498 TYRSNYVSRVKIGVHMPVMGG 560
Score = 88.1 bits (186), Expect(3) = 7e-054
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / +3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
GM+RDFTW+Q+IA+LF H LYVGA KTA WDD VDR+ ++ DG + L A WTS
Sbjct: 90 GMARDFTWVQSIAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTS 266
Score = 68.9 bits (144), Expect(3) = 5e-023
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = -3 / -3
Query: 956 PPMVGIEALTSNRLT*SERYVWPTTPCTSAVSAPNLKARSRCARQSSAVTPYRCTLDSSS 777
PP+ G+ RLT* + V P TP T ++ + NLK RSR ARQSS+ T L+SS
Sbjct: 559 PPITGM*TPILTRLT*LDL*VCPKTPSTLSLRSWNLKPRSR*ARQSSSFTS*PWILESSI 380
Query: 776 VMGTALALMVNLPSSETSTPLAALV 702
V+GT LA++++ PS+ TS L +++
Sbjct: 379 VIGTTLAVILSKPSTSTSRLLVSVL 305
Score = 56.1 bits (116), Expect(3) = 7e-054
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1 / +3
Query: 406 FHGRRDADFCVLSDRDLHINAHFIGKHGA 492
FHG++D++FC++SD +LHINAHFIGK A
Sbjct: 3 FHGKKDSNFCLISDPNLHINAHFIGKRRA 89
Score = 48.3 bits (99), Expect(3) = 5e-023
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -2 / -2
Query: 630 LAVQGELHAVDVVVPRGRLPGADVELVAVEEHGDGLDPREVPGH 499
++V+ + + V+ ++PRG L G+DV V+ EE+G+GLDP EV H
Sbjct: 224 ISVERDGNPVNGIIPRGSL*GSDV*TVSAEEYGNGLDPCEVTCH 93
Score = 31.3 bits (62), Expect(3) = 5e-023
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -3 / -3
Query: 482 LPMKCALMWRSRSESTQKSASRRPWK 405
LPMK ALM R SE QK S PWK
Sbjct: 79 LPMK*ALM*RLGSEIRQKLESFLPWK 2
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9
Length = 77298
Score = 104 bits (222), Expect(3) = 4e-049
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / -1
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 55077 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 54898
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 54897 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 54718
Query: 1030 SRDRD 1044
S D
Sbjct: 54717 SLSAD 54703
Score = 102 bits (218), Expect(3) = 1e-053
Identities = 48/112 (42%), Positives = 61/112 (54%)
Frame = +1 / -2
Query: 694 VTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTAD 873
V RT N V V++ G I PI +EE RVH+Y + DD AHL+ FKF L+
Sbjct: 52643 VERTDERNNVRVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDL 52464
Query: 874 VHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
V GV+G+TYR YV+ MP MGG+ Y T SLF+ C V R+ G
Sbjct: 52463 VEGVLGKTYRPGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 52308
Score = 75.8 bits (159), Expect(3) = 1e-053
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1 / -2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRF+GGDG FYFHG +D +F ++SD +L INAHFIG A
Sbjct: 52976 CYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPA 52845
Score = 73.5 bits (154), Expect(3) = 1e-053
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1 / -2
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA +V+FD H L + A+K A+WDD VD + + +GE V + +A W
Sbjct: 52844 GRTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEW 52674
Score = 71.6 bits (150), Expect(3) = 4e-049
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / -1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD +L INAHFIG
Sbjct: 55389 CYDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIG 55270
Score = 60.6 bits (126), Expect(3) = 4e-049
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1 / -1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA+ V+F+ H+L + A + WD+ D + DGE + L + W
Sbjct: 55257 GRTRDFTWVQALNVMFENHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEW 55087
>gb|BT011223.1| Arabidopsis thaliana
Length = 1232
Score = 102 bits (218), Expect(3) = 1e-053
Identities = 48/112 (42%), Positives = 61/112 (54%)
Frame = +1 / +3
Query: 694 VTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTAD 873
V RT N V V++ G I PI +EE RVH+Y + DD AHL+ FKF L+
Sbjct: 759 VERTDERNNVRVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDL 938
Query: 874 VHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
V GV+G+TYR YV+ MP MGG+ Y T SLF+ C V R+ G
Sbjct: 939 VEGVLGKTYRPGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 1094
Score = 75.8 bits (159), Expect(3) = 1e-053
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRF+GGDG FYFHG +D +F ++SD +L INAHFIG A
Sbjct: 426 CYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPA 557
Score = 73.5 bits (154), Expect(3) = 1e-053
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1 / +3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA +V+FD H L + A+K A+WDD VD + + +GE V + +A W
Sbjct: 558 GRTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEW 728
>ref|NM_125445.1| Arabidopsis thaliana unknown protein AT5G60520 mRNA, complete cds
Length = 1017
Score = 102 bits (218), Expect(3) = 1e-053
Identities = 48/112 (42%), Positives = 61/112 (54%)
Frame = +1 / +1
Query: 694 VTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTAD 873
V RT N V V++ G I PI +EE RVH+Y + DD AHL+ FKF L+
Sbjct: 661 VERTDERNNVRVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDL 840
Query: 874 VHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
V GV+G+TYR YV+ MP MGG+ Y T SLF+ C V R+ G
Sbjct: 841 VEGVLGKTYRPGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 996
Score = 75.8 bits (159), Expect(3) = 1e-053
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRF+GGDG FYFHG +D +F ++SD +L INAHFIG A
Sbjct: 328 CYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPA 459
Score = 73.5 bits (154), Expect(3) = 1e-053
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA +V+FD H L + A+K A+WDD VD + + +GE V + +A W
Sbjct: 460 GRTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEW 630
>ref|NM_124817.2| Arabidopsis thaliana unknown protein AT5G54370 mRNA, complete cds
Length = 1235
Score = 114 bits (243), Expect(3) = 2e-053
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 604 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 783
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 784 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 954
Score = 70.7 bits (148), Expect(3) = 2e-053
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
AC DPRFIGGDG FYFHG+ + +F ++SD DL IN FIG A
Sbjct: 280 ACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPA 414
Score = 66.6 bits (139), Expect(3) = 2e-053
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ ++ + A KTA+WD+++D ++ + DG+ + + T +
Sbjct: 403 HRPAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLST 582
Query: 664 WTS 672
W S
Sbjct: 583 WYS 591
>gb|BT023723.1| Arabidopsis thaliana At5g54370 mRNA, complete cds
Length = 1144
Score = 114 bits (243), Expect(3) = 2e-053
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 596 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 775
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 776 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 946
Score = 70.7 bits (148), Expect(3) = 2e-053
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1 / +2
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
AC DPRFIGGDG FYFHG+ + +F ++SD DL IN FIG A
Sbjct: 272 ACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPA 406
Score = 66.6 bits (139), Expect(3) = 2e-053
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +1 / +2
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ ++ + A KTA+WD+++D ++ + DG+ + + T +
Sbjct: 395 HRPAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLST 574
Query: 664 WTS 672
W S
Sbjct: 575 WYS 583
>emb|CQ805856.1| Sequence 2267 from Patent WO2004035798
Length = 1014
Score = 114 bits (243), Expect(3) = 2e-053
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 580 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 759
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 760 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 930
Score = 70.7 bits (148), Expect(3) = 2e-053
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
AC DPRFIGGDG FYFHG+ + +F ++SD DL IN FIG A
Sbjct: 256 ACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPA 390
Score = 66.6 bits (139), Expect(3) = 2e-053
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ ++ + A KTA+WD+++D ++ + DG+ + + T +
Sbjct: 379 HRPAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLST 558
Query: 664 WTS 672
W S
Sbjct: 559 WYS 567
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 143 bits (307), Expect(3) = 3e-052
Identities = 60/178 (33%), Positives = 95/178 (53%)
Frame = +1 / +3
Query: 568 ARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRF 747
A K WD VD + L+ +G+ + L G + W+ + + RTS N VLV+L
Sbjct: 4823112 ATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSVLVTLQDIA 4823291
Query: 748 TIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFD 927
I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+++V GV+G+TY+ D+ N
Sbjct: 4823292 EIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYKEDFKNPAK 4823471
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMG 1101
+MP +GG+ Y T+SL C Y+ S D+ + + + T S G
Sbjct: 4823472 PGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCTGGSSSG 4823645
Score = 73.0 bits (153), Expect(3) = 3e-052
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1 / +3
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRFIGGDG FYFHG+RD F ++SD D +NA FIG
Sbjct: 4822899 ACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIG 4823021
Score = 30.9 bits (61), Expect(3) = 3e-052
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 493 DGMSRDFTWIQAIAVLF 543
+G +RDFTWIQ++ ++F
Sbjct: 4823031 NGRARDFTWIQSLGLIF 4823081
>gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BAC F14C21 genomic sequence, complete
sequence
Length = 102135
Score = 143 bits (307), Expect(3) = 3e-052
Identities = 60/178 (33%), Positives = 95/178 (53%)
Frame = +1 / -1
Query: 568 ARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRF 747
A K WD VD + L+ +G+ + L G + W+ + + RTS N VLV+L
Sbjct: 81279 ATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSVLVTLQDIA 81100
Query: 748 TIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFD 927
I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+++V GV+G+TY+ D+ N
Sbjct: 81099 EIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYKEDFKNPAK 80920
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMG 1101
+MP +GG+ Y T+SL C Y+ S D+ + + + T S G
Sbjct: 80919 PGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCTGGSSSG 80746
Score = 73.0 bits (153), Expect(3) = 3e-052
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1 / -1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRFIGGDG FYFHG+RD F ++SD D +NA FIG
Sbjct: 81492 ACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIG 81370
Score = 30.9 bits (61), Expect(3) = 3e-052
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 493 DGMSRDFTWIQAIAVLF 543
+G +RDFTWIQ++ ++F
Sbjct: 81360 NGRARDFTWIQSLGLIF 81310
>gb|AC064840.2|AC064840 Arabidopsis thaliana chromosome I BAC T24C10 genomic sequence, complete
sequence
Length = 77923
Score = 143 bits (307), Expect(3) = 3e-052
Identities = 60/178 (33%), Positives = 95/178 (53%)
Frame = +1 / +1
Query: 568 ARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRF 747
A K WD VD + L+ +G+ + L G + W+ + + RTS N VLV+L
Sbjct: 13120 ATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSVLVTLQDIA 13299
Query: 748 TIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFD 927
I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+++V GV+G+TY+ D+ N
Sbjct: 13300 EIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYKEDFKNPAK 13479
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMG 1101
+MP +GG+ Y T+SL C Y+ S D+ + + + T S G
Sbjct: 13480 PGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCTGGSSSG 13653
Score = 73.0 bits (153), Expect(3) = 3e-052
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRFIGGDG FYFHG+RD F ++SD D +NA FIG
Sbjct: 12907 ACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIG 13029
Score = 30.9 bits (61), Expect(3) = 3e-052
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 493 DGMSRDFTWIQAIAVLF 543
+G +RDFTWIQ++ ++F
Sbjct: 13039 NGRARDFTWIQSLGLIF 13089
>ref|NM_104362.2| Arabidopsis thaliana unknown protein AT1G54890 mRNA, complete cds
Length = 1131
Score = 143 bits (307), Expect(3) = 3e-052
Identities = 60/178 (33%), Positives = 95/178 (53%)
Frame = +1 / +1
Query: 568 ARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRF 747
A K WD VD + L+ +G+ + L G + W+ + + RTS N VLV+L
Sbjct: 511 ATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSVLVTLQDIA 690
Query: 748 TIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFD 927
I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+++V GV+G+TY+ D+ N
Sbjct: 691 EIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYKEDFKNPAK 870
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMG 1101
+MP +GG+ Y T+SL C Y+ S D+ + + + T S G
Sbjct: 871 PGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCTGGSSSG 1044
Score = 73.0 bits (153), Expect(3) = 3e-052
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 358 ACGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
AC DPRFIGGDG FYFHG+RD F ++SD D +NA FIG
Sbjct: 298 ACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIG 420
Score = 30.9 bits (61), Expect(3) = 3e-052
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 493 DGMSRDFTWIQAIAVLF 543
+G +RDFTWIQ++ ++F
Sbjct: 430 NGRARDFTWIQSLGLIF 480
>ref|NM_125446.2| Arabidopsis thaliana unknown protein AT5G60530 mRNA, complete cds
Length = 1704
Score = 104 bits (222), Expect(3) = 4e-049
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / +2
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 1034 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 1213
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 1214 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 1393
Query: 1030 SRDRD 1044
S D
Sbjct: 1394 SLSAD 1408
Score = 71.6 bits (150), Expect(3) = 4e-049
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD +L INAHFIG
Sbjct: 722 CYDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIG 841
Score = 60.6 bits (126), Expect(3) = 4e-049
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1 / +2
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA+ V+F+ H+L + A + WD+ D + DGE + L + W
Sbjct: 854 GRTRDFTWVQALNVMFENHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEW 1024
>gb|BT000598.1| Arabidopsis thaliana late embryonic abundant protein
(At5g60530/muf9_180) mRNA, complete cds
Length = 1320
Score = 104 bits (222), Expect(3) = 4e-049
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / +1
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 940 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 1119
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 1120 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 1299
Query: 1030 SRDRD 1044
S D
Sbjct: 1300 SLSAD 1314
Score = 71.6 bits (150), Expect(3) = 4e-049
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD +L INAHFIG
Sbjct: 628 CYDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIG 747
Score = 60.6 bits (126), Expect(3) = 4e-049
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1 / +1
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA+ V+F+ H+L + A + WD+ D + DGE + L + W
Sbjct: 760 GRTRDFTWVQALNVMFENHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEW 930
>gb|AY054263.1| Arabidopsis thaliana AT5g60530/muf9_180 mRNA, complete cds
Length = 1675
Score = 104 bits (222), Expect(3) = 1e-048
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / +2
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 1034 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 1213
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 1214 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 1393
Query: 1030 SRDRD 1044
S D
Sbjct: 1394 SLSAD 1408
Score = 71.6 bits (150), Expect(3) = 1e-048
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIG 480
C DPRF+GGDG FYFHG + +F ++SD +L INAHFIG
Sbjct: 722 CYDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIG 841
Score = 59.3 bits (123), Expect(3) = 1e-048
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1 / +2
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G RDFTW+QA+ V+F+ H+L + A + WD+ D + DGE + L + W
Sbjct: 854 GRIRDFTWVQALNVMFENHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEW 1024
>gb|AY142522.1| Arabidopsis thaliana unknown protein (At4g27400) mRNA, complete cds
Length = 1057
Score = 103 bits (220), Expect(3) = 1e-048
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 589 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 768
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 769 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 918
Score = 66.1 bits (138), Expect(3) = 1e-048
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 388 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 567
Query: 664 WTS 672
W S
Sbjct: 568 WYS 576
Score = 65.2 bits (136), Expect(3) = 1e-048
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 268 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 399
>ref|NM_118874.2| Arabidopsis thaliana unknown protein AT4G27400 mRNA, complete cds
Length = 1057
Score = 103 bits (220), Expect(3) = 1e-048
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +1
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 589 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 768
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 769 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 918
Score = 66.1 bits (138), Expect(3) = 1e-048
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 388 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 567
Query: 664 WTS 672
W S
Sbjct: 568 WYS 576
Score = 65.2 bits (136), Expect(3) = 1e-048
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 268 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 399
>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project)
Length = 82381
Score = 103 bits (220), Expect(3) = 1e-042
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 29789 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 29968
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 29969 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 30118
Score = 65.2 bits (136), Expect(3) = 1e-042
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 29458 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 29637
Query: 664 W 666
W
Sbjct: 29638 W 29640
Score = 65.2 bits (136), Expect(3) = 1e-042
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 29338 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 29469
>emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome 4, P1 clone M4I22 (ESSA project)
Length = 83371
Score = 103 bits (220), Expect(3) = 1e-042
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 82209 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 82388
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 82389 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 82538
Score = 65.2 bits (136), Expect(3) = 1e-042
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +2
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 81878 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 82057
Query: 664 W 666
W
Sbjct: 82058 W 82060
Score = 65.2 bits (136), Expect(3) = 1e-042
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 81758 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 81889
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
Length = 200001
Score = 103 bits (220), Expect(3) = 6e-042
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 16683 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 16862
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 16863 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 17012
Score = 65.2 bits (136), Expect(3) = 6e-042
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +2
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 16352 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 16531
Query: 664 W 666
W
Sbjct: 16532 W 16534
Score = 65.2 bits (136), Expect(3) = 6e-042
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +2
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 16232 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 16363
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 103 bits (220), Expect(3) = 2e-038
Identities = 39/110 (35%), Positives = 65/110 (59%)
Frame = +1 / +2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R + N V+V++ + I N VP+T+E+ R+H Y + DDC AH ++ FKF L+
Sbjct: 9618974 IKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLS 9619153
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYA 1017
V G++G+TYR D+ N MP +GG+ ++ TSSL + C ++
Sbjct: 9619154 PKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFS 9619303
Score = 65.2 bits (136), Expect(3) = 2e-038
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +1
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 9618643 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 9618822
Query: 664 W 666
W
Sbjct: 9618823 W 9618825
Score = 65.2 bits (136), Expect(3) = 2e-038
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +1
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 9618523 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 9618654
>gb|AV543918.1|AV543918 AV543918 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ28a04F 3', mRNA sequence
Length = 616
Score = 137 bits (294), Expect(2) = 4e-036
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = +1 / -3
Query: 715 NGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQ 894
N + V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQ
Sbjct: 518 NNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQ 339
Query: 895 TYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
TYRS+YV+R + MP MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 338 TYRSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNN 195
Score = 37.3 bits (75), Expect(2) = 4e-036
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1 / -3
Query: 1066 EIAGITCASGMGGQGVVCKK* 1128
E+ ++CASG+GG+GVVCK+*
Sbjct: 179 ELPEMSCASGLGGKGVVCKR* 117
>gb|AV546945.1|AV546945 AV546945 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL22c01F 3', mRNA sequence
Length = 551
Score = 127 bits (273), Expect(2) = 3e-033
Identities = 51/91 (56%), Positives = 65/91 (71%)
Frame = +1 / -3
Query: 766 VPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFDVKASMP 945
VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQTYRS+YV+R + MP
Sbjct: 546 VPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQTYRSNYVSRVKIGVHMP 367
Query: 946 TMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 366 VMGGDREFQTTGLFAPDCSAARFTGNGDSNN 274
Score = 37.3 bits (75), Expect(2) = 3e-033
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1 / -3
Query: 1066 EIAGITCASGMGGQGVVCKK* 1128
E+ ++CASG+GG+GVVCK+*
Sbjct: 258 ELPEMSCASGLGGKGVVCKR* 196
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 143 bits (307), Expect = 1e-032
Identities = 60/178 (33%), Positives = 95/178 (53%)
Frame = +1 / +2
Query: 568 ARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTSGAVPALSVTRTSAANGVLVSLDGRF 747
A K WD VD + L+ +G+ + L G + W+ + + RTS N VLV+L
Sbjct: 20467517 ATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSVLVTLQDIA 20467696
Query: 748 TIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTYRSDYVNRFD 927
I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+++V GV+G+TY+ D+ N
Sbjct: 20467697 EIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYKEDFKNPAK 20467876
Query: 928 VKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDDGVAMVSEIAGITCASGMG 1101
+MP +GG+ Y T+SL C Y+ S D+ + + + T S G
Sbjct: 20467877 PGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCTGGSSSG 20468050
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 136 bits (291), Expect = 2e-030
Identities = 55/106 (51%), Positives = 72/106 (67%)
Frame = +1 / -3
Query: 721 VLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTY 900
+ V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQTY
Sbjct: 6704398 IQVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQTY 6704219
Query: 901 RSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
RS+YV+R + MP MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 6704218 RSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNN 6704081
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 136 bits (291), Expect = 2e-030
Identities = 55/106 (51%), Positives = 72/106 (67%)
Frame = +1 / -2
Query: 721 VLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALTADVHGVVGQTY 900
+ V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF L+ +V GV+GQTY
Sbjct: 6736783 IQVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQTY 6736604
Query: 901 RSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
RS+YV+R + MP MGGD + T+ LFA DC+ AR+ +G S +
Sbjct: 6736603 RSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNN 6736466
>gb|AV552371.1|AV552371 AV552371 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ28a04R 5', mRNA sequence
Length = 394
Score = 88.1 bits (186), Expect(2) = 3e-030
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1 / +2
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAWTS 672
GM+RDFTW+Q+IA+LF H LYVGA KTA WDD VDR+ ++ DG + L A WTS
Sbjct: 20 GMARDFTWVQSIAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTS 196
Score = 67.0 bits (140), Expect(2) = 3e-030
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +1 / +2
Query: 715 NGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKF 855
N + V ++G I A VPIT E+SR+H Y V DDCLAHLDL FKF
Sbjct: 248 NNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKF 388
>dbj|AP000380.1| Arabidopsis thaliana genomic DNA, chromosome 5, genomic PCR product
GA469
Length = 7717
Score = 114 bits (243), Expect(2) = 2e-029
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 299 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 478
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 479 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 649
Score = 44.6 bits (91), Expect(2) = 2e-029
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +1 / +1
Query: 523 QAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
QA+ LF+ ++ + A KTA+WD+++D ++ + DG+ + + T + W
Sbjct: 1 QALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLSTW 144
>gb|CW841669.1|CW841669 ET11466.Ds3.04.02.2003.jw87.708 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET11466, DNA sequence
Length = 708
Score = 75.8 bits (159), Expect(2) = 7e-028
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRF+GGDG FYFHG +D +F ++SD +L INAHFIG A
Sbjct: 234 CYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPA 365
Score = 71.6 bits (150), Expect(2) = 7e-028
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +1 / +3
Query: 496 GMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAAW 666
G +RDFTW+QA +V+FD H L + A+K A+WDD VD + + +GE V + + W
Sbjct: 366 GRTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEGEW 536
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 114 bits (243), Expect = 8e-024
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 19747530 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 19747709
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 19747710 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 19747880
Score = 104 bits (222), Expect = 6e-021
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / -2
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 21619890 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 21619711
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 21619710 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 21619531
Query: 1030 SRDRD 1044
S D
Sbjct: 21619530 SLSAD 21619516
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 114 bits (243), Expect = 8e-024
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1 / +3
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + R S N V+V++ + I N VP+T+E+ R+H Y V +DDC AHL++ F+F L+
Sbjct: 22093359 IKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLS 22093538
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRD 1038
V G++G+TYR D+ N +MP +GG+ ++ TSSL + DC ++ S D
Sbjct: 22093539 PKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEID 22093709
Score = 104 bits (222), Expect = 6e-021
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +1 / -2
Query: 670 SGAVPALSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAF 849
SG + + RT N V V + + PI +EE+RVH Y + DD AHL+ F
Sbjct: 24351803 SGQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQF 24351624
Query: 850 KFGALTADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGG 1029
KF L+ V GV+G+TYR DYV+ MP +GG+ Y T SLF+ C + R+ P
Sbjct: 24351623 KFLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEE 24351444
Query: 1030 SRDRD 1044
S D
Sbjct: 24351443 SLSAD 24351429
>emb|AJ834201.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
013H05
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834511.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H06
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834512.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H07
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834513.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H08
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834514.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H09
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834515.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H10
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>emb|AJ834516.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
031H11
Length = 402
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1 / +3
Query: 484 HGADGMSRDFTWIQAIAVLFDGHELYVGARKTAAWDDDVDRMELTLDGEPVRLLPGTDAA 663
H G +RDFTWIQA+ LF+ H+ + K A WD ++D ++ T+DG+ + + T +
Sbjct: 159 HRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLST 338
Query: 664 W 666
W
Sbjct: 339 W 341
Score = 65.2 bits (136), Expect(2) = 7e-023
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 361 CGDPRFIGGDGNAFYFHGRRDADFCVLSDRDLHINAHFIGKHGA 492
C DPRFIGGDG FYFHG+ + F ++SD D INA F G A
Sbjct: 39 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPA 170
>gb|AI998070.1|AI998070 701515527 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis thaliana
cDNA clone 701515527, mRNA sequence
Length = 487
Score = 109 bits (232), Expect = 2e-022
Identities = 46/138 (33%), Positives = 75/138 (54%)
Frame = +1 / -2
Query: 688 LSVTRTSAANGVLVSLDGRFTIRANAVPITEEESRVHRYGVTADDCLAHLDLAFKFGALT 867
+ + RTS N VLV+L I N VP+T+E+ +H+YG+ DDC AHL++ F+F L+
Sbjct: 474 IKIERTSDINSVLVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLS 295
Query: 868 ADVHGVVGQTYRSDYVNRFDVKASMPTMGGDSNYTTSSLFAADCAVARYAPSGGSRDRDD 1047
++V GV+G+TY+ D+ + + P +GG+ Y T+SL C + S D+ +
Sbjct: 294 SNVEGVLGRTYKEDFKSPSKPGVARPVVGGEDKYRTASLLETSCNACVCSGGSRSLDKIE 115
Query: 1048 GVAMVSEIAGITCASGMG 1101
+ + T S G
Sbjct: 114 PLLLNQNTVDCTGGSSSG 61
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,792,744,891
Number of Sequences: 1013581
Number of extensions: 21701364
Number of successful extensions: 177034
Number of sequences better than 1.0e-020: 47
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 93423551913
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)