TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8616263.2.1
(509 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV558873.1|AV558873 AV558873 Arabidopsis thaliana green ... 184 2e-045
emb|BX832306.1|CNS09ZLF Arabidopsis thaliana Full-length cD... 184 2e-045
gb|BT015359.1| Arabidopsis thaliana At5g60020 gene, complet... 184 2e-045
gb|BT015890.1| Arabidopsis thaliana At5g60020 gene, complet... 184 2e-045
ref|NM_125395.3| Arabidopsis thaliana copper ion binding AT... 184 2e-045
gb|AV441001.1|AV441001 AV441001 Arabidopsis thaliana above-... 179 4e-044
ref|NM_128470.3| Arabidopsis thaliana copper ion binding AT... 174 1e-042
emb|BX842419.1|CNS0A7PD Arabidopsis thaliana Full-length cD... 172 7e-042
emb|AL089527.1|CNS00TCP Arabidopsis thaliana genome survey ... 106 3e-041
dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosom... 106 4e-041
emb|AL096216.1|CNS00YII Arabidopsis thaliana genome survey ... 106 4e-041
ref|NM_125281.1| Arabidopsis thaliana copper ion binding AT... 167 2e-040
gb|AV532135.1|AV532135 AV532135 Arabidopsis thaliana flower... 164 2e-039
gb|AV540676.1|AV540676 AV540676 Arabidopsis thaliana roots ... 164 2e-039
gb|AY052669.1| Arabidopsis thaliana At2g38080/T8P21. mRNA, ... 164 2e-039
gb|AY065187.1| Arabidopsis thaliana putative diphenol oxida... 164 2e-039
gb|AY114636.1| Arabidopsis thaliana putative diphenol oxida... 164 2e-039
emb|BX819300.1|CNS0A9ZV Arabidopsis thaliana Full-length cD... 164 2e-039
emb|BX821553.1|CNS0AA40 Arabidopsis thaliana Full-length cD... 164 2e-039
ref|NM_129364.2| Arabidopsis thaliana IRX12; copper ion bin... 164 2e-039
gb|AY063730.1| Arabidopsis thaliana At2g38080/T8P21. mRNA, ... 164 2e-039
gb|BT014855.1| Arabidopsis thaliana At5g01190 gene, complet... 162 6e-039
ref|NM_120197.3| Arabidopsis thaliana copper ion binding AT... 162 6e-039
gb|BP787187.1|BP787187 BP787187 RAFL7 Arabidopsis thaliana ... 162 6e-039
gb|AV792270.1|AV792270 AV792270 RAFL7 Arabidopsis thaliana ... 162 8e-039
gb|AI998334.1|AI998334 701545291 A. thaliana, Columbia Col-... 158 1e-037
gb|AV784834.1|AV784834 AV784834 RAFL6 Arabidopsis thaliana ... 157 2e-037
gb|AV522586.1|AV522586 AV522586 Arabidopsis thaliana aboveg... 157 2e-037
gb|BP620902.1|BP620902 BP620902 RAFL16 Arabidopsis thaliana... 157 2e-037
gb|AY065128.1| Arabidopsis thaliana laccase (diphenol oxida... 157 2e-037
gb|AY081592.1| Arabidopsis thaliana laccase (diphenol oxida... 157 2e-037
emb|BX831939.1|CNS0A0YM Arabidopsis thaliana Full-length cD... 157 2e-037
emb|BX832282.1|CNS0A126 Arabidopsis thaliana Full-length cD... 157 2e-037
emb|BX831525.1|CNS0A1O5 Arabidopsis thaliana Full-length cD... 157 2e-037
ref|NM_120404.3| Arabidopsis thaliana copper ion binding AT... 157 2e-037
gb|AV539260.1|AV539260 AV539260 Arabidopsis thaliana roots ... 155 9e-037
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 155 1e-036
gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis tha... 155 1e-036
gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsi... 155 1e-036
ref|NM_101674.3| Arabidopsis thaliana copper ion binding AT... 155 1e-036
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 155 1e-036
gb|AI994215.1|AI994215 701500341 A. thaliana, Ohio State cl... 155 1e-036
emb|AL806682.1| Arabidopsis thaliana transposon insertion S... 155 1e-036
emb|AL806699.1| Arabidopsis thaliana transposon insertion S... 155 1e-036
gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4... 100 1e-035
gb|AV815278.1|AV815278 AV815278 RAFL9 Arabidopsis thaliana ... 151 2e-035
gb|B27688.1|B27688 T14H9TFB TAMU Arabidopsis thaliana genom... 99 3e-035
emb|BX822041.1|CNS0AAEO Arabidopsis thaliana Full-length cD... 149 4e-035
emb|AL807518.1| Arabidopsis thaliana transposon insertion S... 92 4e-035
emb|AL807557.1| Arabidopsis thaliana transposon insertion S... 92 4e-035
emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5... 92 5e-035
gb|AA585817.1|AA585817 28466 Lambda-PRL2 Arabidopsis thalia... 149 8e-035
dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosom... 91 9e-034
gb|AV546787.1|AV546787 AV546787 Arabidopsis thaliana roots ... 145 1e-033
emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome... 83 1e-033
dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosom... 83 1e-033
gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M... 95 3e-033
gb|AV787312.1|AV787312 AV787312 RAFL6 Arabidopsis thaliana ... 143 3e-033
gb|AV797382.1|AV797382 AV797382 RAFL9 Arabidopsis thaliana ... 143 5e-033
gb|BX835965.1|BX835965 BX835965 Arabidopsis thaliana Hormon... 137 3e-031
gb|AV538466.1|AV538466 AV538466 Arabidopsis thaliana roots ... 137 3e-031
gb|AV538596.1|AV538596 AV538596 Arabidopsis thaliana roots ... 137 3e-031
ref|NM_128574.1| Arabidopsis thaliana copper ion binding AT... 137 3e-031
emb|AX412603.1| Sequence 367 from Patent WO0222675 135 1e-030
emb|AX507215.1| Sequence 1910 from Patent WO0216655 135 1e-030
dbj|AK221241.1| Arabidopsis thaliana mRNA for putative lacc... 135 1e-030
emb|BX820001.1|CNS0A80N Arabidopsis thaliana Full-length cD... 84 3e-030
gb|AV561049.1|AV561049 AV561049 Arabidopsis thaliana green ... 133 3e-030
gb|AV563756.1|AV563756 AV563756 Arabidopsis thaliana green ... 133 3e-030
gb|B28556.1|B28556 T13C14TR TAMU Arabidopsis thaliana genom... 77 3e-030
gb|BP595630.1|BP595630 BP595630 RAFL15 Arabidopsis thaliana... 133 5e-030
gb|BE521176.1|BE521176 M18A3XTM Arabidopsis developing seed... 131 2e-029
gb|BE521178.1|BE521178 M18A4XP Arabidopsis developing seed ... 131 2e-029
gb|AU227405.1|AU227405 AU227405 RAFL15 Arabidopsis thaliana... 131 2e-029
gb|AV555534.1|AV555534 AV555534 Arabidopsis thaliana green ... 131 2e-029
gb|AV556399.1|AV556399 AV556399 Arabidopsis thaliana green ... 131 2e-029
gb|AV556618.1|AV556618 AV556618 Arabidopsis thaliana green ... 131 2e-029
gb|AV559179.1|AV559179 AV559179 Arabidopsis thaliana green ... 131 2e-029
gb|AV559182.1|AV559182 AV559182 Arabidopsis thaliana green ... 131 2e-029
gb|AV560195.1|AV560195 AV560195 Arabidopsis thaliana green ... 131 2e-029
gb|AV563443.1|AV563443 AV563443 Arabidopsis thaliana green ... 131 2e-029
gb|AV564567.1|AV564567 AV564567 Arabidopsis thaliana green ... 131 2e-029
gb|AV564942.1|AV564942 AV564942 Arabidopsis thaliana green ... 131 2e-029
gb|BP593146.1|BP593146 BP593146 RAFL15 Arabidopsis thaliana... 131 2e-029
gb|BP593699.1|BP593699 BP593699 RAFL15 Arabidopsis thaliana... 131 2e-029
gb|BT002919.1| Arabidopsis thaliana clone RAFL15-04-D21 (R2... 131 2e-029
gb|BT005152.1| Arabidopsis thaliana clone U20177 putative l... 131 2e-029
emb|CS130513.1| Sequence 31 from Patent WO2005063995 131 2e-029
ref|NM_124184.2| Arabidopsis thaliana copper ion binding AT... 131 2e-029
gb|AF506030.1| Arabidopsis thaliana laccase (lac1) mRNA, co... 129 7e-029
ref|NM_129597.2| Arabidopsis thaliana copper ion binding AT... 129 7e-029
gb|AV557342.1|AV557342 AV557342 Arabidopsis thaliana green ... 126 6e-028
gb|AV561650.1|AV561650 AV561650 Arabidopsis thaliana green ... 126 6e-028
emb|BX832095.1|CNS0A27I Arabidopsis thaliana Full-length cD... 126 6e-028
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 126 6e-028
emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome... 126 6e-028
ref|NM_120795.3| Arabidopsis thaliana copper ion binding AT... 126 6e-028
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 126 6e-028
gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E... 76 7e-028
gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9... 76 7e-028
emb|BX831710.1|CNS09ZVI Arabidopsis thaliana Full-length cD... 125 8e-028
ref|NM_120972.1| Arabidopsis thaliana copper ion binding AT... 125 8e-028
ref|NM_120621.1| Arabidopsis thaliana copper ion binding AT... 125 1e-027
gb|BP602522.1|BP602522 BP602522 RAFL16 Arabidopsis thaliana... 102 1e-027
gb|BZ382558.1|BZ382558 SALK_118473.54.40.x Arabidopsis thal... 77 1e-027
gb|BP594393.1|BP594393 BP594393 RAFL15 Arabidopsis thaliana... 124 2e-027
gb|AV543742.1|AV543742 AV543742 Arabidopsis thaliana roots ... 120 3e-026
gb|AV545019.1|AV545019 AV545019 Arabidopsis thaliana roots ... 120 3e-026
gb|AV548944.1|AV548944 AV548944 Arabidopsis thaliana roots ... 120 3e-026
gb|BP588013.1|BP588013 BP588013 RAFL15 Arabidopsis thaliana... 120 3e-026
ref|NM_120181.3| Arabidopsis thaliana copper ion binding AT... 120 3e-026
gb|AV809466.1|AV809466 AV809466 RAFL9 Arabidopsis thaliana ... 78 3e-026
gb|BT004971.1| Arabidopsis thaliana clone U50490 putative l... 119 5e-026
dbj|AK117639.1| Arabidopsis thaliana At3g09220 mRNA for put... 119 5e-026
ref|NM_111756.2| Arabidopsis thaliana copper ion binding AT... 119 5e-026
ref|NM_130222.1| Arabidopsis thaliana copper ion binding AT... 116 3e-025
ref|NM_120182.2| Arabidopsis thaliana copper ion binding AT... 116 3e-025
gb|AV542740.1|AV542740 AV542740 Arabidopsis thaliana roots ... 115 9e-025
gb|BE521179.1|BE521179 M18A4XTM Arabidopsis developing seed... 115 1e-024
gb|AU225962.1|AU225962 AU225962 RAFL14 Arabidopsis thaliana... 81 2e-024
gb|AV816241.1|AV816241 AV816241 RAFL9 Arabidopsis thaliana ... 113 4e-024
emb|BX295241.1| Arabidopsis thaliana transposon insertion S... 77 6e-024
dbj|AB010692.1| Arabidopsis thaliana genomic DNA, chromosom... 68 2e-023
dbj|AB017064.1| Arabidopsis thaliana genomic DNA, chromosom... 80 3e-023
gb|AQ965370.1|AQ965370 LERIB75TR LERG Arabidopsis thaliana ... 66 3e-023
gb|BP792246.1|BP792246 BP792246 RAFL7 Arabidopsis thaliana ... 110 4e-023
gb|AV556615.1|AV556615 AV556615 Arabidopsis thaliana green ... 109 6e-023
gb|BH904558.1|BH904558 SALK_104662.54.50.x Arabidopsis thal... 68 8e-023
gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome II... 68 3e-022
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 68 3e-022
gb|AV787178.1|AV787178 AV787178 RAFL6 Arabidopsis thaliana ... 50 3e-022
gb|AA394577.1|AA394577 26160 Lambda-PRL2 Arabidopsis thalia... 90 3e-022
gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A... 64 5e-022
gb|B78182.1|B78182 T31J14TF TAMU Arabidopsis thaliana genom... 106 5e-022
gb|AY078937.1| Arabidopsis thaliana At2g46570/F13A10.10 mRN... 63 1e-021
gb|AQ965371.1|AQ965371 LERIB75TRB LERG Arabidopsis thaliana... 66 1e-021
gb|CC056391.1|CC056391 SALK_103610.32.15.n Arabidopsis thal... 68 3e-021
gb|AY200380.1|AY200380 AY200380 Arabidopsis thaliana Landsb... 65 5e-021
gb|AV548054.1|AV548054 AV548054 Arabidopsis thaliana roots ... 103 5e-021
>gb|AV558873.1|AV558873 AV558873 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ107c08F 3', mRNA sequence
Length = 555
Score = 184 bits (396), Expect = 2e-045
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLV
Sbjct: 482 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLV 303
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
LDG P QKLLPPP+DLPKC*
Sbjct: 302 LDGDKPDQKLLPPPADLPKC* 240
Score = 127 bits (272), Expect = 2e-028
Identities = 55/83 (66%), Positives = 61/83 (73%)
Frame = +1 / +1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP
Sbjct: 232 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPP 411
Query: 439 AGTPTVLRSTGSTRLNLDGSLTG 507
GTPTV S GSTRL GSL G
Sbjct: 412 DGTPTVFLSIGSTRLKFLGSLFG 480
>emb|BX832306.1|CNS09ZLF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZD11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2013
Score = 184 bits (396), Expect = 2e-045
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLV
Sbjct: 1568 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLV 1747
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
LDG P QKLLPPP+DLPKC*
Sbjct: 1748 LDGDKPDQKLLPPPADLPKC* 1810
Score = 127 bits (272), Expect = 2e-028
Identities = 55/83 (66%), Positives = 61/83 (73%)
Frame = +1 / -1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP
Sbjct: 1818 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPP 1639
Query: 439 AGTPTVLRSTGSTRLNLDGSLTG 507
GTPTV S GSTRL GSL G
Sbjct: 1638 DGTPTVFLSIGSTRLKFLGSLFG 1570
>gb|BT015359.1| Arabidopsis thaliana At5g60020 gene, complete cds
Length = 2004
Score = 184 bits (396), Expect = 2e-045
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLV
Sbjct: 1568 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLV 1747
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
LDG P QKLLPPP+DLPKC*
Sbjct: 1748 LDGDKPDQKLLPPPADLPKC* 1810
Score = 127 bits (272), Expect = 2e-028
Identities = 55/83 (66%), Positives = 61/83 (73%)
Frame = +1 / -1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP
Sbjct: 1818 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPP 1639
Query: 439 AGTPTVLRSTGSTRLNLDGSLTG 507
GTPTV S GSTRL GSL G
Sbjct: 1638 DGTPTVFLSIGSTRLKFLGSLFG 1570
>gb|BT015890.1| Arabidopsis thaliana At5g60020 gene, complete cds
Length = 1734
Score = 184 bits (396), Expect = 2e-045
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -1 / +1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLV
Sbjct: 1492 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLV 1671
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
LDG P QKLLPPP+DLPKC*
Sbjct: 1672 LDGDKPDQKLLPPPADLPKC* 1734
Score = 126 bits (269), Expect = 6e-028
Identities = 55/80 (68%), Positives = 58/80 (72%)
Frame = +1 / -2
Query: 268 QHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGT 447
QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP GT
Sbjct: 1733 QHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPPDGT 1554
Query: 448 PTVLRSTGSTRLNLDGSLTG 507
PTV S GSTRL GSL G
Sbjct: 1553 PTVFLSIGSTRLKFLGSLFG 1494
>ref|NM_125395.3| Arabidopsis thaliana copper ion binding AT5G60020 mRNA, complete cds
Length = 2049
Score = 184 bits (396), Expect = 2e-045
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLV
Sbjct: 1568 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLV 1747
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
LDG P QKLLPPP+DLPKC*
Sbjct: 1748 LDGDKPDQKLLPPPADLPKC* 1810
Score = 127 bits (272), Expect = 2e-028
Identities = 55/83 (66%), Positives = 61/83 (73%)
Frame = +1 / -1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP
Sbjct: 1818 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPP 1639
Query: 439 AGTPTVLRSTGSTRLNLDGSLTG 507
GTPTV S GSTRL GSL G
Sbjct: 1638 DGTPTVFLSIGSTRLKFLGSLFG 1570
>gb|AV441001.1|AV441001 AV441001 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ19h10_f 3', mRNA
sequence
Length = 434
Score = 179 bits (386), Expect = 4e-044
Identities = 66/77 (85%), Positives = 70/77 (90%)
Frame = -1 / -2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDP+ERNTVGVP+GGW AIRFLADNPGVWFMHCHLE HT+WGLRMAWLVLDG
Sbjct: 427 DPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLVLDGD 248
Query: 317 LPHQKLLPPPSDLPKC* 267
P QKLLPPP+DLPKC*
Sbjct: 247 KPDQKLLPPPADLPKC* 197
Score = 125 bits (268), Expect(2) = 2e-027
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = +1 / +3
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TPGLSAR R+A HPP
Sbjct: 189 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTPGLSARNRIAAHPP 368
Query: 439 AGTPTVLRSTGSTRLNLDGSL 501
GTPTV S GSTRL GSL
Sbjct: 369 DGTPTVFLSIGSTRLKFLGSL 431
Score = 17.6 bits (32), Expect(2) = 2e-027
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / +3
Query: 83 EEKNYKKVQVS*ER 124
EEKN + V+ *ER
Sbjct: 105 EEKNEENVRSL*ER 146
>ref|NM_128470.3| Arabidopsis thaliana copper ion binding AT2G29130 mRNA, complete cds
Length = 2022
Score = 174 bits (375), Expect = 1e-042
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = -1 / +1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP +NLVDPVERNT+ +P+GGWVAIRFLADNPGVW MHCH+E H +WGL MAW+V
Sbjct: 1480 NPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVV 1659
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QKLLPPPSD PKC*L
Sbjct: 1660 LDGDLPNQKLLPPPSDFPKC*L 1725
Score = 118 bits (252), Expect = 1e-025
Identities = 51/81 (62%), Positives = 58/81 (71%)
Frame = +1 / -2
Query: 265 NQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAG 444
+QHLGKS+GGG SF GR PS T A++RP + S WQC++ TPGLSARKRMATHPP G
Sbjct: 1724 SQHLGKSEGGGRSF*FGRSPSKTTQAMVRPQLK*ISMWQCISHTPGLSARKRMATHPPEG 1545
Query: 445 TPTVLRSTGSTRLNLDGSLTG 507
V RSTGSTRL GS G
Sbjct: 1544 ILMVFRSTGSTRL*CFGSRAG 1482
>emb|BX842419.1|CNS0A7PD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL2ZD01 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 510
Score = 172 bits (370), Expect = 7e-042
Identities = 62/82 (75%), Positives = 70/82 (85%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP NLVDPVERNT+ +P+GGWVAIRFLADNPGVW MHCH+E H +WGL MAW+V
Sbjct: 50 NPARDPKHHNLVDPVERNTINIPSGGWVAIRFLADNPGVWVMHCHIEIHLSWGLTMAWVV 229
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QKLLPPPSD PKC*L
Sbjct: 230 LDGDLPNQKLLPPPSDFPKC*L 295
Score = 115 bits (245), Expect = 1e-024
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +1 / -1
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLGKS+GGG SF GR PS T A++RP + S WQC+ TPGLSARKRMATHPP G
Sbjct: 288 HLGKSEGGGRSF*FGRSPSKTTQAMVRPQLK*ISMWQCITHTPGLSARKRMATHPPEGIL 109
Query: 451 TVLRSTGSTRLNLDGSLTG 507
V RSTGSTRL GS G
Sbjct: 108 MVFRSTGSTRL*CFGSRAG 52
>emb|AL089527.1|CNS00TCP Arabidopsis thaliana genome survey sequence SP6 end of BAC T4B13 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 425
Score = 106 bits (226), Expect(2) = 3e-041
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1 / -3
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HT+WGLRMAWLVLDG P QKLLPPP+DLPKC*
Sbjct: 192 GVWFMHCHLEVHTSWGLRMAWLVLDGDKPDQKLLPPPADLPKC* 61
Score = 83.5 bits (176), Expect(2) = 3e-041
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPG
Sbjct: 390 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPG 277
Score = 73.0 bits (153), Expect(2) = 2e-024
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +2
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TP
Sbjct: 53 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTP 193
Score = 60.6 bits (126), Expect(2) = 2e-024
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 397 PGLSARKRMATHPPAGTPTVLRSTGSTRLNLDGSLTG 507
PGLSAR R+A HPP GTPTV S GSTRL GSL G
Sbjct: 278 PGLSARNRIAAHPPDGTPTVFLSIGSTRLKFLGSLFG 388
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10
Length = 84325
Score = 106 bits (226), Expect(2) = 4e-041
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1 / +3
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HT+WGLRMAWLVLDG P QKLLPPP+DLPKC*
Sbjct: 83559 GVWFMHCHLEVHTSWGLRMAWLVLDGDKPDQKLLPPPADLPKC* 83690
Score = 83.5 bits (176), Expect(2) = 4e-041
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPG
Sbjct: 83361 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPG 83474
Score = 73.0 bits (153), Expect(2) = 2e-024
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / -1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TP
Sbjct: 83698 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTP 83558
Score = 60.6 bits (126), Expect(2) = 2e-024
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 397 PGLSARKRMATHPPAGTPTVLRSTGSTRLNLDGSLTG 507
PGLSAR R+A HPP GTPTV S GSTRL GSL G
Sbjct: 83473 PGLSARNRIAAHPPDGTPTVFLSIGSTRLKFLGSLFG 83363
>emb|AL096216.1|CNS00YII Arabidopsis thaliana genome survey sequence SP6 end of BAC T16J19
of TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 720
Score = 106 bits (226), Expect(2) = 4e-041
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1 / -1
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HT+WGLRMAWLVLDG P QKLLPPP+DLPKC*
Sbjct: 192 GVWFMHCHLEVHTSWGLRMAWLVLDGDKPDQKLLPPPADLPKC* 61
Score = 83.5 bits (176), Expect(2) = 4e-041
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
DP DP FNLVDP+ERNTVGVP+GGW AIRFLADNPG
Sbjct: 390 DPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPG 277
Score = 73.0 bits (153), Expect(2) = 2e-024
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +2
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
+++QHLGKS GGG SF G PS T+ AILRP +VC SK QCMN TP
Sbjct: 53 KNSQHLGKSAGGGRSF*SGLSPSRTSQAILRPQLVCTSK*QCMNHTP 193
Score = 60.6 bits (126), Expect(2) = 2e-024
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 397 PGLSARKRMATHPPAGTPTVLRSTGSTRLNLDGSLTG 507
PGLSAR R+A HPP GTPTV S GSTRL GSL G
Sbjct: 278 PGLSARNRIAAHPPDGTPTVFLSIGSTRLKFLGSLFG 388
>ref|NM_125281.1| Arabidopsis thaliana copper ion binding AT5G58910 mRNA, complete cds
Length = 1572
Score = 167 bits (360), Expect = 2e-040
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP FNLVDPVERNTVGVPAGGW AIRF+ADNPGVWFMHCHLE HTTWGL+MA++V
Sbjct: 1330 NPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLELHTTWGLKMAFVV 1509
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P Q LLPPP+DLPKC*
Sbjct: 1510 DNGHGPDQSLLPPPADLPKC* 1572
Score = 119 bits (255), Expect = 5e-026
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +1 / -2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGGS+ W G P ST +AI P VVC SK QCMN TPGLSA MA PPAGTP
Sbjct: 1568 HLGRSAGGGSNDWSGP*PLSTTNAIFNPQVVCNSK*QCMNHTPGLSAMNLMAVQPPAGTP 1389
Query: 451 TVLRSTGSTRLNLDGSLTG 507
TV STGST+LN GS +G
Sbjct: 1388 TVFLSTGSTKLNAFGSFSG 1332
>gb|AV532135.1|AV532135 AV532135 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB036d04F 3', mRNA sequence
Length = 559
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / -3
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 428 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 249
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 248 GPNQSILPPPKDLPKC*V 195
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / +1
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 202 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 381
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 382 IVFLSTGSTKLKFFGS 429
>gb|AV540676.1|AV540676 AV540676 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ153f04F 3', mRNA sequence
Length = 537
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / -3
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 436 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 257
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 256 GPNQSILPPPKDLPKC*V 203
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / +3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 210 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 389
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 390 IVFLSTGSTKLKFFGS 437
>gb|AY052669.1| Arabidopsis thaliana At2g38080/T8P21. mRNA, complete cds
Length = 1891
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1463 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1642
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 1643 GPNQSILPPPKDLPKC*V 1696
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1689 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1510
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1509 IVFLSTGSTKLKFFGS 1462
>gb|AY065187.1| Arabidopsis thaliana putative diphenol oxidase (At2g38080; F16M14.1)
mRNA, complete cds
Length = 1937
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1529 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1708
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 1709 GPNQSILPPPKDLPKC*V 1762
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1755 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1576
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1575 IVFLSTGSTKLKFFGS 1528
>gb|AY114636.1| Arabidopsis thaliana putative diphenol oxidase (At2g38080) mRNA,
complete cds
Length = 1759
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1447 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1626
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 1627 GPNQSILPPPKDLPKC*V 1680
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1673 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1494
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1493 IVFLSTGSTKLKFFGS 1446
>emb|BX819300.1|CNS0A9ZV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB66ZE03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1967
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1517 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1696
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 1697 GPNQSILPPPKDLPKC*V 1750
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1743 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1564
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1563 IVFLSTGSTKLKFFGS 1516
>emb|BX821553.1|CNS0AA40 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL52ZF06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 611
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 157 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 336
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 337 GPNQSILPPPKDLPKC*V 390
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -1
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 383 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 204
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 203 IVFLSTGSTKLKFFGS 156
>ref|NM_129364.2| Arabidopsis thaliana IRX12; copper ion binding AT2G38080 (IRX12)
mRNA, complete cds
Length = 2019
Score = 164 bits (353), Expect = 2e-039
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1525 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1704
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 1705 GPNQSILPPPKDLPKC*V 1758
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1751 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1572
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1571 IVFLSTGSTKLKFFGS 1524
>gb|AY063730.1| Arabidopsis thaliana At2g38080/T8P21. mRNA, complete cds
Length = 1677
Score = 164 bits (352), Expect = 2e-039
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1447 DPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1626
Query: 317 LPHQKLLPPPSDLPKC* 267
P+Q +LPPP DLPKC*
Sbjct: 1627 GPNQSILPPPKDLPKC* 1677
Score = 111 bits (236), Expect = 2e-023
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = +1 / -2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 1673 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 1494
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 1493 IVFLSTGSTKLKFFGS 1446
>gb|BT014855.1| Arabidopsis thaliana At5g01190 gene, complete cds
Length = 1677
Score = 162 bits (349), Expect = 6e-039
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
D +KFNLVDPVERNTVGVP+GGW AIRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1447 DSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1626
Query: 317 LPHQKLLPPPSDLPKC* 267
P+Q + PPPSDLPKC*
Sbjct: 1627 GPNQSIRPPPSDLPKC* 1677
Score = 127 bits (272), Expect = 2e-028
Identities = 52/74 (70%), Positives = 55/74 (74%)
Frame = +1 / -2
Query: 268 QHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGT 447
QHLG+S GGG W G LP ST AI PHVVC SKWQC+NQTPGLSAR +A PP GT
Sbjct: 1676 QHLGRSLGGGRIDWLGPLPFSTKKAIFSPHVVCTSKWQCINQTPGLSARNLIAAQPPEGT 1497
Query: 448 PTVLRSTGSTRLNL 489
PTV STGSTRLNL
Sbjct: 1496 PTVFLSTGSTRLNL 1455
>ref|NM_120197.3| Arabidopsis thaliana copper ion binding AT5G01190 mRNA, complete cds
Length = 1821
Score = 162 bits (349), Expect = 6e-039
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
D +KFNLVDPVERNTVGVP+GGW AIRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 1447 DSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 1626
Query: 317 LPHQKLLPPPSDLPKC* 267
P+Q + PPPSDLPKC*
Sbjct: 1627 GPNQSIRPPPSDLPKC* 1677
Score = 127 bits (273), Expect = 2e-028
Identities = 53/76 (69%), Positives = 56/76 (73%)
Frame = +1 / -2
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPA 441
S QHLG+S GGG W G LP ST AI PHVVC SKWQC+NQTPGLSAR +A PP
Sbjct: 1682 SFQHLGRSLGGGRIDWLGPLPFSTKKAIFSPHVVCTSKWQCINQTPGLSARNLIAAQPPE 1503
Query: 442 GTPTVLRSTGSTRLNL 489
GTPTV STGSTRLNL
Sbjct: 1502 GTPTVFLSTGSTRLNL 1455
>gb|BP787187.1|BP787187 BP787187 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-03-F10 3',
mRNA sequence
Length = 423
Score = 162 bits (349), Expect = 6e-039
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = -1 / -3
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
D +KFNLVDPVERNTVGVP+GGW AIRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 346 DSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGK 167
Query: 317 LPHQKLLPPPSDLPKC* 267
P+Q + PPPSDLPKC*
Sbjct: 166 GPNQSIRPPPSDLPKC* 116
Score = 127 bits (273), Expect = 2e-028
Identities = 53/76 (69%), Positives = 56/76 (73%)
Frame = +1 / +3
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPA 441
S QHLG+S GGG W G LP ST AI PHVVC SKWQC+NQTPGLSAR +A PP
Sbjct: 111 SFQHLGRSLGGGRIDWLGPLPFSTKKAIFSPHVVCTSKWQCINQTPGLSARNLIAAQPPE 290
Query: 442 GTPTVLRSTGSTRLNL 489
GTPTV STGSTRLNL
Sbjct: 291 GTPTVFLSTGSTRLNL 338
>gb|AV792270.1|AV792270 AV792270 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-14-E01 3',
mRNA sequence
Length = 416
Score = 162 bits (348), Expect = 8e-039
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = -1 / -2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGS 318
DP FNLVDPVERNT+GVP+GGWV IRF DNPGVWFMHCHLE HTTWGL+MA+LV +G
Sbjct: 409 DPKNFNLVDPVERNTIGVPSGGWVVIRFRPDNPGVWFMHCHLEVHTTWGLKMAFLVENGK 230
Query: 317 LPHQKLLPPPSDLPKC*L 264
P+Q +LPPP DLPKC*+
Sbjct: 229 GPNQSILPPPKDLPKC*V 176
Score = 109 bits (232), Expect = 8e-023
Identities = 48/76 (63%), Positives = 50/76 (65%)
Frame = +1 / +3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLS M THPP GTP
Sbjct: 183 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSGLNLMTTHPPDGTP 362
Query: 451 TVLRSTGSTRLNLDGS 498
V STGST+L GS
Sbjct: 363 IVFLSTGSTKLKFFGS 410
>gb|AI998334.1|AI998334 701545291 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701545291, mRNA sequence
Length = 483
Score = 158 bits (340), Expect = 1e-037
Identities = 58/74 (78%), Positives = 66/74 (89%)
Frame = -1 / -1
Query: 485 FNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQ 306
FNLVDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G P+Q
Sbjct: 483 FNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQ 304
Query: 305 KLLPPPSDLPKC*L 264
+LPPP DLPKC*+
Sbjct: 303 SILPPPKDLPKC*V 262
Score = 107 bits (229), Expect = 2e-022
Identities = 47/71 (66%), Positives = 49/71 (69%)
Frame = +1 / +2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 269 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 448
Query: 451 TVLRSTGSTRL 483
V STGST+L
Sbjct: 449 IVFLSTGSTKL 481
>gb|AV784834.1|AV784834 AV784834 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-08-M01 3',
mRNA sequence
Length = 692
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 420 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 241
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 240 ENGETPELSVLPPPKDYPSC* 178
>gb|AV522586.1|AV522586 AV522586 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ83c03F 3', mRNA
sequence
Length = 485
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 420 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 241
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 240 ENGETPELSVLPPPKDYPSC* 178
>gb|BP620902.1|BP620902 BP620902 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-39-D16 3',
mRNA sequence
Length = 426
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 420 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 241
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 240 ENGETPELSVLPPPKDYPSC* 178
>gb|AY065128.1| Arabidopsis thaliana laccase (diphenol oxidase)-like protein
(MOK16.17) mRNA, complete cds
Length = 1936
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1518 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1697
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1698 ENGETPELSVLPPPKDYPSC* 1760
>gb|AY081592.1| Arabidopsis thaliana laccase (diphenol oxidase)-like protein
(MOK16.17) mRNA, complete cds
Length = 1833
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1432 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1611
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1612 ENGETPELSVLPPPKDYPSC* 1674
>emb|BX831939.1|CNS0A0YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH40ZC08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1880
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1499 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1678
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1679 ENGETPELSVLPPPKDYPSC* 1741
>emb|BX832282.1|CNS0A126 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH63ZA06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1880
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1502 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1681
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1682 ENGETPELSVLPPPKDYPSC* 1744
>emb|BX831525.1|CNS0A1O5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH12ZD11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1909
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1500 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1679
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1680 ENGETPELSVLPPPKDYPSC* 1742
>ref|NM_120404.3| Arabidopsis thaliana copper ion binding AT5G03260 mRNA, complete cds
Length = 1937
Score = 157 bits (338), Expect = 2e-037
Identities = 58/81 (71%), Positives = 64/81 (79%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ERNTVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 1518 DPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 1697
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 1698 ENGETPELSVLPPPKDYPSC* 1760
>gb|AV539260.1|AV539260 AV539260 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ129g04F 3', mRNA sequence
Length = 444
Score = 155 bits (333), Expect = 9e-037
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDP ER+TVGVP GGW AIRF ADNPGVWFMHCHLE HT WGL+MA++V
Sbjct: 412 DPKKDPAKFNLVDPPERSTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAFVV 233
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P +LPPP D P C*
Sbjct: 232 ENGEAPELSVLPPPKDYPSC* 170
Score = 102 bits (217), Expect = 9e-021
Identities = 47/77 (61%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 277 GKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTPTV 456
G S GGG + G P ST AI +PH+V SK QC+NQTPGLSA MA PP GTPTV
Sbjct: 180 G*SLGGGRTESSGASPFSTTKAIFKPHIVWTSK*QCINQTPGLSALNLMAAQPPVGTPTV 359
Query: 457 LRSTGSTRLNLDGSLTG 507
L S GSTRLNL GS G
Sbjct: 360 LLSGGSTRLNLAGSFLG 410
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 6239045 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 6238866
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 6238865 KDGPLPSQTLLPPPHDLPQC*KMSSII 6238785
>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I,
complete sequence
Length = 92948
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 30610 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 30431
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 30430 KDGPLPSQTLLPPPHDLPQC*KMSSII 30350
>gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 81129
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 45306 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 45127
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 45126 KDGPLPSQTLLPPPHDLPQC*KMSSII 45046
>ref|NM_101674.3| Arabidopsis thaliana copper ion binding AT1G18140 mRNA, complete cds
Length = 1931
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 1547 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 1726
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 1727 KDGPLPSQTLLPPPHDLPQC*KMSSII 1807
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 6239221 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 6239042
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 6239041 KDGPLPSQTLLPPPHDLPQC*KMSSII 6238961
>gb|AI994215.1|AI994215 701500341 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701500341, mRNA sequence
Length = 451
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 335 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 156
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 155 KDGPLPSQTLLPPPHDLPQC*KMSSII 75
>emb|AL806682.1| Arabidopsis thaliana transposon insertion STS SM_3.19975, sequence
tagged site
Length = 360
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 268 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 89
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 88 KDGPLPSQTLLPPPHDLPQC*KMSSII 8
>emb|AL806699.1| Arabidopsis thaliana transposon insertion STS SM_3.19969, sequence
tagged site
Length = 350
Score = 155 bits (332), Expect = 1e-036
Identities = 59/87 (67%), Positives = 66/87 (75%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP ++NLVDP ERNT VP GGW AIR ADNPGVWF+HCHLE HT+WGL M ++V
Sbjct: 268 DPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIV 89
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
DG LP Q LLPPP DLP+C* SS I
Sbjct: 88 KDGPLPSQTLLPPPHDLPQC*KMSSII 8
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete sequence
Length = 108393
Score = 100 bits (213), Expect(2) = 1e-035
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -1 / -2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC*L 264
GVW MHCH+E H +WGL MAW+VLDG LP+QKLLPPPSD PKC*L
Sbjct: 105056 GVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC*L 104922
Score = 79.9 bits (168), Expect(2) = 1e-035
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
+P DP +NLVDPVERNT+ +P+GGWVAIRFLADNPG
Sbjct: 105321 NPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPG 105208
>gb|AV815278.1|AV815278 AV815278 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-86-B19 3',
mRNA sequence
Length = 412
Score = 151 bits (324), Expect = 2e-035
Identities = 55/71 (77%), Positives = 63/71 (88%)
Frame = -1 / -2
Query: 476 VDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLL 297
VDPVERNT+GVP+GGWV IRF ADNPGVWFMHCHLE HTTWGL+MA+LV +G P+Q +L
Sbjct: 411 VDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIL 232
Query: 296 PPPSDLPKC*L 264
PPP DLPKC*+
Sbjct: 231 PPPKDLPKC*V 199
Score = 105 bits (223), Expect = 1e-021
Identities = 46/69 (66%), Positives = 47/69 (68%)
Frame = +1 / +2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGG G LP ST AI PHVVC SK QCMNQTPGLSA M THPP GTP
Sbjct: 206 HLGRSLGGGKID*LGPLPFSTKKAIFNPHVVCTSK*QCMNQTPGLSALNLMTTHPPDGTP 385
Query: 451 TVLRSTGST 477
V STGST
Sbjct: 386 IVFLSTGST 412
>gb|B27688.1|B27688 T14H9TFB TAMU Arabidopsis thaliana genomic clone T14H9, DNA
sequence
Length = 379
Score = 98.7 bits (209), Expect(2) = 3e-035
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = -1 / -2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPK 273
GVWFMHCHLE HT+WG+RMAW+VLDG P QKLLPPP+DLP+
Sbjct: 192 GVWFMHCHLEVHTSWGMRMAWIVLDGDKPDQKLLPPPADLPR 67
Score = 71.2 bits (149), Expect(2) = 3e-035
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -1 / -2
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
DP FN+VDPVE+NTVGVP GGW AIRF ADNPG
Sbjct: 378 DPRDFNVVDPVEKNTVGVPYGGWAAIRFGADNPG 277
>emb|BX822041.1|CNS0AAEO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL94ZA07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 498
Score = 149 bits (321), Expect = 4e-035
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = -1 / +1
Query: 464 ERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPS 285
ERNT+ +P+GGWVAIRFLADNPGVW MHCH+E H +WGL MAW+VLDG LP+QKLLPPPS
Sbjct: 1 ERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPS 180
Query: 284 DLPKC*L 264
D PKC*L
Sbjct: 181 DFPKC*L 201
>emb|AL807518.1| Arabidopsis thaliana transposon insertion STS SM_3.20902, sequence
tagged site
Length = 439
Score = 92.3 bits (195), Expect(2) = 4e-035
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -1 / +2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HTTWGL+MA+LV +G P+Q + PPPSDLPKC*
Sbjct: 260 GVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIRPPPSDLPKC* 391
Score = 79.0 bits (166), Expect(2) = 1e-024
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +1 / -2
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
S QHLG+S GGG W G LP ST AI PHVVC SKWQC+NQTP
Sbjct: 396 SFQHLGRSLGGGRIDWLGPLPFSTKKAIFSPHVVCTSKWQCINQTP 259
Score = 77.1 bits (162), Expect(2) = 4e-035
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFM 384
D +KFNLVDPVERNTVGVP+GGW AIRF ADNPG + +
Sbjct: 43 DSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGFYLI 156
Score = 55.1 bits (114), Expect(2) = 1e-024
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1 / -3
Query: 397 PGLSARKRMATHPPAGTPTVLRSTGSTRLNL 489
PGLSAR +A PP GTPTV STGSTRLNL
Sbjct: 143 PGLSARNLIAAQPPEGTPTVFLSTGSTRLNL 51
>emb|AL807557.1| Arabidopsis thaliana transposon insertion STS SM_3.20891, sequence
tagged site
Length = 445
Score = 92.3 bits (195), Expect(2) = 4e-035
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -1 / +2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HTTWGL+MA+LV +G P+Q + PPPSDLPKC*
Sbjct: 260 GVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIRPPPSDLPKC* 391
Score = 79.0 bits (166), Expect(2) = 1e-024
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +1 / -2
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
S QHLG+S GGG W G LP ST AI PHVVC SKWQC+NQTP
Sbjct: 396 SFQHLGRSLGGGRIDWLGPLPFSTKKAIFSPHVVCTSKWQCINQTP 259
Score = 77.1 bits (162), Expect(2) = 4e-035
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -1 / +1
Query: 497 DPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFM 384
D +KFNLVDPVERNTVGVP+GGW AIRF ADNPG + +
Sbjct: 43 DSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGFYLI 156
Score = 55.1 bits (114), Expect(2) = 1e-024
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1 / -3
Query: 397 PGLSARKRMATHPPAGTPTVLRSTGSTRLNL 489
PGLSAR +A PP GTPTV STGSTRLNL
Sbjct: 143 PGLSARNLIAAQPPEGTPTVFLSTGSTRLNL 51
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 951,840,062
Number of Sequences: 1013581
Number of extensions: 11417810
Number of successful extensions: 278349
Number of sequences better than 1.0e-020: 150
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 28548395340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)