TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8161196.3.1
(825 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR749838.1|DR749838 88-L020592-065-004-H11-SeLA MPIZ-ADI... 160 1e-051
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 159 3e-051
ref|NM_124200.2| Arabidopsis thaliana transcription factor/... 159 3e-051
gb|AY039957.1| Arabidopsis thaliana unknown protein (At5g48... 159 3e-051
gb|AY142607.1| Arabidopsis thaliana unknown protein (At5g48... 159 3e-051
gb|AV822621.1|AV822621 AV822621 RAFL5 Arabidopsis thaliana ... 159 1e-050
emb|BX842291.1|CNS0A16Z Arabidopsis thaliana Full-length cD... 156 1e-049
gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome II... 159 1e-049
ref|NM_111644.3| Arabidopsis thaliana transcription factor/... 159 1e-049
ref|NM_202521.1| Arabidopsis thaliana zinc ion binding AT3G... 159 1e-049
ref|NM_001035582.1| Arabidopsis thaliana zinc ion binding A... 159 1e-049
emb|BX823694.1|CNS0A5E9 Arabidopsis thaliana Full-length cD... 159 1e-049
gb|DR749974.1|DR749974 80-L020592-065-004-H10-SeLA MPIZ-ADI... 159 2e-049
emb|BX822094.1|CNS0A64S Arabidopsis thaliana Full-length cD... 113 3e-045
gb|BX838637.1|BX838637 BX838637 Arabidopsis thaliana Flower... 148 2e-044
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 159 1e-037
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 159 1e-037
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 159 1e-037
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 159 1e-037
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 154 4e-036
gb|AY037206.1| Arabidopsis thaliana At1g28050/F13K9_15 mRNA... 154 4e-036
gb|BT002067.1| Arabidopsis thaliana putative CONSTANS-like ... 154 4e-036
gb|BT002681.1| Arabidopsis thaliana At1g28050/F13K9_15 gene... 154 4e-036
gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BA... 154 4e-036
gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9... 154 4e-036
emb|CS137514.1| Sequence 485 from Patent WO2005047516 154 4e-036
emb|CS137680.1| Sequence 651 from Patent WO2005047516 154 4e-036
emb|CS145522.1| Sequence 29 from Patent EP1566444 154 4e-036
emb|CS145562.1| Sequence 69 from Patent EP1566444 154 4e-036
ref|NM_179880.1| Arabidopsis thaliana transcription factor/... 154 4e-036
ref|NM_102570.3| Arabidopsis thaliana transcription factor/... 154 4e-036
ref|NM_201860.1| Arabidopsis thaliana zinc ion binding AT2G... 154 4e-036
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 154 4e-036
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 154 4e-036
gb|AV821281.1|AV821281 AV821281 RAFL3 Arabidopsis thaliana ... 152 2e-035
gb|CK118704.1|CK118704 216d21.p1 AtM1 Arabidopsis thaliana ... 152 2e-035
emb|BX819212.1|CNS0A9XD Arabidopsis thaliana Full-length cD... 150 4e-035
emb|BX818986.1|CNS0A9T9 Arabidopsis thaliana Full-length cD... 150 6e-035
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 128 5e-034
emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ... 128 5e-034
emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosom... 128 5e-034
gb|DR749726.1|DR749726 96-L020592-065-004-H12-SeLA MPIZ-ADI... 127 7e-034
gb|DR751089.1|DR751089 25-L021269-065-004-H12S-SeLA MPIZ-AD... 126 1e-033
ref|NM_117613.2| Arabidopsis thaliana transcription factor/... 125 5e-033
dbj|AP000739.1| Arabidopsis thaliana genomic DNA, chromosom... 117 1e-032
ref|NM_113084.1| Arabidopsis thaliana transcription factor/... 113 1e-031
gb|DR750961.1|DR750961 30-L021271-065-005-D09S-SeLA MPIZ-AD... 116 1e-031
emb|BX814831.1|CNS0AANX Arabidopsis thaliana Full-length cD... 125 4e-031
emb|BX821321.1|CNS0A96S Arabidopsis thaliana Full-length cD... 125 5e-030
emb|BX820857.1|CNS0AACO Arabidopsis thaliana Full-length cD... 121 9e-030
gb|BX839204.1|BX839204 BX839204 Arabidopsis thaliana Adult ... 120 2e-029
gb|AQ962274.1|AQ962274 LERGE40TF LERG Arabidopsis thaliana ... 105 4e-029
gb|BE521198.1|BE521198 M18B3STM Arabidopsis developing seed... 119 1e-028
emb|AL807619.1| Arabidopsis thaliana transposon insertion S... 128 2e-028
emb|BX323620.1| Arabidopsis thaliana transposon insertion S... 128 2e-028
emb|BX323634.1| Arabidopsis thaliana transposon insertion S... 128 2e-028
emb|BX323654.1| Arabidopsis thaliana transposon insertion S... 128 2e-028
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 128 2e-028
gb|BP796064.1|BP796064 BP796064 RAFL3 Arabidopsis thaliana ... 105 3e-027
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 104 3e-027
gb|AC016447.5|AC016447 Arabidopsis thaliana chromosome 1 BA... 104 3e-027
dbj|AK117800.1| Arabidopsis thaliana At1g68190 mRNA for put... 104 3e-027
ref|NM_105490.2| Arabidopsis thaliana transcription factor/... 104 3e-027
gb|B78508.1|B78508 T30N16TFC TAMU Arabidopsis thaliana geno... 104 3e-027
gb|DR749840.1|DR749840 88-L021127-065-005-H11-SeLA MPIZ-ADI... 104 3e-027
gb|DR749790.1|DR749790 92-L021127-065-005-D12-SeLA MPIZ-ADI... 121 4e-026
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 109 2e-024
gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J2... 109 2e-024
ref|NM_201983.1| Arabidopsis thaliana zinc ion binding AT2G... 109 2e-024
gb|BT023413.1| Arabidopsis thaliana At2g47890 gene, complet... 109 2e-024
ref|NM_130356.3| Arabidopsis thaliana transcription factor/... 109 2e-024
emb|BX821011.1|CNS0A8OW Arabidopsis thaliana Full-length cD... 109 2e-024
emb|BX821202.1|CNS0A86T Arabidopsis thaliana Full-length cD... 109 2e-024
emb|AX412450.1| Sequence 214 from Patent WO0222675 109 2e-024
emb|AX412898.1| Sequence 662 from Patent WO0222675 109 2e-024
emb|AX507288.1| Sequence 1983 from Patent WO0216655 109 2e-024
emb|CQ806120.1| Sequence 2531 from Patent WO2004035798 109 2e-024
gb|BX838577.1|BX838577 BX838577 Arabidopsis thaliana Flower... 109 2e-024
gb|AV551250.1|AV551250 AV551250 Arabidopsis thaliana roots ... 109 2e-024
gb|DR750047.1|DR750047 76-L021127-065-005-D10-SeLA MPIZ-ADI... 109 2e-024
emb|BX819180.1|CNS0A8VS Arabidopsis thaliana Full-length cD... 109 6e-024
gb|BX838041.1|BX838041 BX838041 Arabidopsis thaliana Hormon... 109 9e-024
gb|T04394.1|T04394 441 Lambda-PRL2 Arabidopsis thaliana cDN... 99 6e-023
gb|AI993392.1|AI993392 701496174 A. thaliana, Ohio State cl... 109 1e-022
gb|B95968.1|B95968 T30K6TF TAMU Arabidopsis thaliana genomi... 104 5e-021
>gb|DR749838.1|DR749838 88-L020592-065-004-H11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 004-H11, mRNA sequence
Length = 935
Score = 160 bits (344), Expect(2) = 1e-051
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +3 / +2
Query: 363 IMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVR 542
+M +C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVR
Sbjct: 71 LMGSMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVR 250
Query: 543 CLEDNTSLCQNCDWNGHDAASGAS 614
C ++ SLCQNCDW+GHD + +
Sbjct: 251 CSDERVSLCQNCDWSGHDGKNSTT 322
Score = 65.7 bits (137), Expect(2) = 1e-051
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IWSF D+ +AE
Sbjct: 326 SHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 433
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 159 bits (341), Expect(2) = 3e-051
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / -1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 54719 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 54540
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 54539 RVSLCQNCDWSGHDGKNSTT 54480
Score = 65.7 bits (137), Expect(2) = 3e-051
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3 / -1
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IWSF D+ +AE
Sbjct: 54476 SHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 54369
>ref|NM_124200.2| Arabidopsis thaliana transcription factor/ zinc ion binding
AT5G48250 mRNA, complete cds
Length = 1704
Score = 159 bits (341), Expect(2) = 3e-051
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / +3
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 192 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 371
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 372 RVSLCQNCDWSGHDGKNSTT 431
Score = 65.7 bits (137), Expect(2) = 3e-051
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IWSF D+ +AE
Sbjct: 435 SHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 542
>gb|AY039957.1| Arabidopsis thaliana unknown protein (At5g48250) mRNA, complete cds
Length = 1689
Score = 159 bits (341), Expect(2) = 3e-051
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 194 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 373
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 374 RVSLCQNCDWSGHDGKNSTT 433
Score = 65.7 bits (137), Expect(2) = 3e-051
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IWSF D+ +AE
Sbjct: 437 SHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 544
>gb|AY142607.1| Arabidopsis thaliana unknown protein (At5g48250) mRNA, complete cds
Length = 1153
Score = 159 bits (341), Expect(2) = 3e-051
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 10 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 189
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 190 RVSLCQNCDWSGHDGKNSTT 249
Score = 65.7 bits (137), Expect(2) = 3e-051
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IWSF D+ +AE
Sbjct: 253 SHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 360
>gb|AV822621.1|AV822621 AV822621 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-09-I21 5',
mRNA sequence
Length = 653
Score = 159 bits (341), Expect(2) = 1e-050
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 194 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 373
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 374 RVSLCQNCDWSGHDGKNSTT 433
Score = 63.8 bits (133), Expect(2) = 1e-050
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +3 / +2
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSSAELS IW F D+ +AE
Sbjct: 437 SHHKRQTINCYSGCPSSAELSSIWXFCMDLNISSAE 544
>emb|BX842291.1|CNS0A16Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH31ZB07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1475
Score = 156 bits (335), Expect(2) = 1e-049
Identities = 55/80 (68%), Positives = 67/80 (83%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+ C QPASVRC ++
Sbjct: 161 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCEMCNAQPASVRCSDE 340
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 341 RVSLCQNCDWSGHDGKNSTT 400
Score = 63.4 bits (132), Expect(2) = 1e-049
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +3 / +2
Query: 612 SGHKRQAINCYSGCPSSAELSRIWSFITDIPTVAAE 719
S HKRQ INCYSGCPSS ELS IWSF D+ +AE
Sbjct: 404 SHHKRQTINCYSGCPSSPELSSIWSFCMDLNISSAE 511
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
sequence
Length = 79296
Score = 159 bits (342), Expect(2) = 1e-049
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +2
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 28484 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 28663
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 28664 RCVEERVSLCQNCDWSGHN 28720
Score = 59.7 bits (124), Expect(2) = 1e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 28736 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 28852
>ref|NM_111644.3| Arabidopsis thaliana transcription factor/ zinc ion binding
AT3G07650 transcript variant AT3G07650.1 mRNA, complete
cds
Length = 1946
Score = 159 bits (342), Expect(2) = 1e-049
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +2
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 191 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 370
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 371 RCVEERVSLCQNCDWSGHN 427
Score = 59.7 bits (124), Expect(2) = 1e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 443 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 559
>ref|NM_202521.1| Arabidopsis thaliana zinc ion binding AT3G07650 transcript variant
AT3G07650.2 mRNA, complete cds
Length = 1936
Score = 159 bits (342), Expect(2) = 1e-049
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +1
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 181 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 360
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 361 RCVEERVSLCQNCDWSGHN 417
Score = 59.7 bits (124), Expect(2) = 1e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 433 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 549
>ref|NM_001035582.1| Arabidopsis thaliana zinc ion binding AT3G07650 transcript variant
AT3G07650.3 mRNA, complete cds
Length = 1837
Score = 159 bits (342), Expect(2) = 1e-049
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +3
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 207 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 386
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 387 RCVEERVSLCQNCDWSGHN 443
Score = 59.7 bits (124), Expect(2) = 1e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 459 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 575
>emb|BX823694.1|CNS0A5E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS68ZC04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1775
Score = 159 bits (342), Expect(2) = 1e-049
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +1
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 181 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 360
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 361 RCVEERVSLCQNCDWSGHN 417
Score = 59.7 bits (124), Expect(2) = 1e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 433 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 549
>gb|DR749974.1|DR749974 80-L020592-065-004-H10-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 004-H10, mRNA sequence
Length = 907
Score = 159 bits (341), Expect(2) = 2e-049
Identities = 56/74 (75%), Positives = 67/74 (90%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+VRC+E+
Sbjct: 83 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEE 262
Query: 555 NTSLCQNCDWNGHD 596
SLCQNCDW+GH+
Sbjct: 263 RVSLCQNCDWSGHN 304
Score = 59.7 bits (124), Expect(2) = 2e-049
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 320 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 436
>emb|BX822094.1|CNS0A64S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB11ZF02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1713
Score = 113 bits (241), Expect(3) = 3e-045
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +3 / +1
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQP 530
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QP
Sbjct: 181 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQP 351
Score = 59.7 bits (124), Expect(3) = 3e-045
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HKRQ I+CYSGCPSS+EL+ IWSF D+
Sbjct: 434 NSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDL 550
Score = 50.1 bits (103), Expect(3) = 3e-045
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / +2
Query: 522 LQPASVRCLEDNTSLCQNCDWNGHD 596
L A+VRC+E+ SLCQNCDW+GH+
Sbjct: 344 LSHATVRCVEERVSLCQNCDWSGHN 418
>gb|BX838637.1|BX838637 BX838637 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB26ZC01 5PRIM, mRNA sequence
Length = 1133
Score = 148 bits (317), Expect(2) = 2e-044
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3 / +2
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSC RSVHSANALS+RH RTL+C + QPA+V
Sbjct: 191 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCHRSVHSANALSKRHSRTLVCKKSNAQPATV 370
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ S+CQNCDW+GH+
Sbjct: 371 RCVEERVSICQNCDWSGHN 427
Score = 53.8 bits (111), Expect(2) = 2e-044
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 585 NGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDI 701
N +++ HK+Q I+ YSGCPSS+EL+ IWSF D+
Sbjct: 443 NSSSSSTSPQQHKKQTISSYSGCPSSSELASIWSFCLDL 559
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 159 bits (342), Expect = 1e-037
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +3
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 2438469 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 2438648
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 2438649 RCVEERVSLCQNCDWSGHN 2438705
Score = 117 bits (250), Expect = 5e-025
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 348 LILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQ 527
+I+S M P C C +++IYC+SD A LCL+CD VHSAN LS RH R+L+C++C Q
Sbjct: 7658584 IIMSPSMEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQ 7658763
Query: 528 PASVRCLEDNTSLCQNCDWN 587
PA++RCL++ S CQ C W+
Sbjct: 7658764 PAAIRCLDEKVSYCQGCHWH 7658823
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 159 bits (342), Expect = 1e-037
Identities = 58/79 (73%), Positives = 69/79 (87%)
Frame = +3 / +2
Query: 360 RIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASV 539
R M +C FCG+QRSM+YCRSDAA LCLSCDRSVHSANALS+RH RTL+C+RC QPA+V
Sbjct: 2442494 RKMGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATV 2442673
Query: 540 RCLEDNTSLCQNCDWNGHD 596
RC+E+ SLCQNCDW+GH+
Sbjct: 2442674 RCVEERVSLCQNCDWSGHN 2442730
Score = 117 bits (250), Expect = 5e-025
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 348 LILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQ 527
+I+S M P C C +++IYC+SD A LCL+CD VHSAN LS RH R+L+C++C Q
Sbjct: 7706737 IIMSPSMEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQ 7706916
Query: 528 PASVRCLEDNTSLCQNCDWN 587
PA++RCL++ S CQ C W+
Sbjct: 7706917 PAAIRCLDEKVSYCQGCHWH 7706976
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 159 bits (341), Expect = 1e-037
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / -2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 17673231 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 17673052
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 17673051 RVSLCQNCDWSGHDGKNSTT 17672992
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 159 bits (341), Expect = 1e-037
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +3 / -2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAA LCLSCDR+VHSANALS+RH RTL+C+RC QPASVRC ++
Sbjct: 19580330 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 19580151
Query: 555 NTSLCQNCDWNGHDAASGAS 614
SLCQNCDW+GHD + +
Sbjct: 19580150 RVSLCQNCDWSGHDGKNSTT 19580091
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / -1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 9786417 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 9786238
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 9786237 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 9786112
>gb|AY037206.1| Arabidopsis thaliana At1g28050/F13K9_15 mRNA, complete cds
Length = 1644
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 127 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 306
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 307 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 432
>gb|BT002067.1| Arabidopsis thaliana putative CONSTANS-like B-box zinc finger
protein (At2g33500) mRNA, complete cds
Length = 1566
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 233 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 412
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 413 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 547
>gb|BT002681.1| Arabidopsis thaliana At1g28050/F13K9_15 gene, complete cds
Length = 1302
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 25 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 204
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 205 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 330
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete
sequence
Length = 126991
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / -3
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 63947 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 63768
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 63767 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 63642
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete
sequence
Length = 152593
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / -3
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 93878 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 93699
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 93698 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 93564
>emb|CS137514.1| Sequence 485 from Patent WO2005047516
Length = 1558
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 215 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 394
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 395 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 529
>emb|CS137680.1| Sequence 651 from Patent WO2005047516
Length = 1630
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 121 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 300
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 301 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 426
>emb|CS145522.1| Sequence 29 from Patent EP1566444
Length = 1630
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 121 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 300
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 301 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 426
>emb|CS145562.1| Sequence 69 from Patent EP1566444
Length = 1558
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 215 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 394
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 395 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 529
>ref|NM_179880.1| Arabidopsis thaliana transcription factor/ zinc ion binding
AT2G33500 transcript variant AT2G33500.1 mRNA, complete
cds
Length = 1589
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 233 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 412
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 413 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 547
>ref|NM_102570.3| Arabidopsis thaliana transcription factor/ zinc ion binding
AT1G28050 mRNA, complete cds
Length = 1695
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 178 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 357
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 358 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 483
>ref|NM_201860.1| Arabidopsis thaliana zinc ion binding AT2G33500 transcript variant
AT2G33500.2 mRNA, complete cds
Length = 1586
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 233 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 412
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 413 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 547
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 154 bits (330), Expect = 4e-036
Identities = 53/105 (50%), Positives = 74/105 (70%)
Frame = +3 / -1
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 14197098 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 14196919
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 14196918 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 14196784
Score = 109 bits (232), Expect = 1e-022
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
LC +C +++YC++D+A LCL+CD+ VH AN L +H R+LLCD C P+S+ C +
Sbjct: 19615348 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETE 19615527
Query: 555 NTSLCQNCDWNGHDAAS 605
+ LCQNCDW H A+S
Sbjct: 19615528 RSVLCQNCDWQHHTASS 19615578
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 154 bits (330), Expect = 4e-036
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +3 / -1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 9777620 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 9777441
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A+ +SGCPS+ EL+ +W
Sbjct: 9777440 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALW 9777315
Score = 104 bits (221), Expect = 5e-021
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +3 / +2
Query: 342 ISLILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCG 521
+ +I+ M +C FC R+++YC +D A+LCL+CD VHSAN+LS RH RT+LCD C
Sbjct: 25563050 LCIIIIENMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCK 25563229
Query: 522 LQPASVRCLEDNTSLCQNCDWNGHDAAS 605
QP VRC + LC C+ H S
Sbjct: 25563230 NQPCVVRCFDHKMFLCHGCNDKFHGGGS 25563313
>gb|AV821281.1|AV821281 AV821281 RAFL3 Arabidopsis thaliana cDNA clone RAFL03-05-O03 5',
mRNA sequence
Length = 516
Score = 152 bits (326), Expect = 2e-035
Identities = 52/102 (50%), Positives = 72/102 (70%)
Frame = +3 / +2
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN
Sbjct: 128 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 307
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S + H R A +SGCPS+ EL+ +W
Sbjct: 308 LILCQECDWDVHGSCSVSDAHVRSAXEGFSGCPSALELAALW 433
>gb|CK118704.1|CK118704 216d21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D21216
5-PRIME, mRNA sequence
Length = 544
Score = 152 bits (326), Expect = 2e-035
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +3 / +1
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 166 VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 345
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
DN LCQ CDW+ H + S ++ H+R A+ +SGCP EL+ +W
Sbjct: 346 TDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPXVLELAAVW 480
>emb|BX819212.1|CNS0A9XD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB58ZA02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1443
Score = 150 bits (323), Expect = 4e-035
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +3 / +1
Query: 369 VPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCL 548
V C FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC
Sbjct: 121 VVACEFCGERTAVLFCRADTARLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCF 300
Query: 549 EDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
D LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 301 TDRLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 435
>emb|BX818986.1|CNS0A9T9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB34ZG09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1484
Score = 150 bits (322), Expect = 6e-035
Identities = 51/100 (51%), Positives = 72/100 (72%)
Frame = +3 / +3
Query: 384 FCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTS 563
FCG++ ++++CR+D A LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC DN
Sbjct: 183 FCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLV 362
Query: 564 LCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIW 683
LCQ CDW+ H + S ++ H+R A+ +SGCPS EL+ +W
Sbjct: 363 LCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVW 482
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 128 bits (274), Expect(2) = 5e-034
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +3 / -2
Query: 342 ISLILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCG 521
+ L R M C FCG ++++IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C
Sbjct: 4623873 LEFCLRRSMEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCS 4623694
Query: 522 LQPASVRCLEDNTSLCQNCDW 584
LQP +V C+ +N SLCQ C W
Sbjct: 4623693 LQPTAVHCMNENVSLCQGCQW 4623631
Score = 38.6 bits (78), Expect(2) = 5e-034
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS ++ +IWS
Sbjct: 4623606 GHRLQSLNPYSDCPSPSDFGKIWS 4623535
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3
Length = 200252
Score = 128 bits (274), Expect(2) = 5e-034
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +3 / -1
Query: 342 ISLILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCG 521
+ L R M C FCG ++++IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C
Sbjct: 75773 LEFCLRRSMEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCS 75594
Query: 522 LQPASVRCLEDNTSLCQNCDW 584
LQP +V C+ +N SLCQ C W
Sbjct: 75593 LQPTAVHCMNENVSLCQGCQW 75531
Score = 38.6 bits (78), Expect(2) = 5e-034
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS ++ +IWS
Sbjct: 75506 GHRLQSLNPYSDCPSPSDFGKIWS 75435
>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41
Length = 197419
Score = 128 bits (274), Expect(2) = 5e-034
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +3 / -2
Query: 342 ISLILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCG 521
+ L R M C FCG ++++IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C
Sbjct: 29250 LEFCLRRSMEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCS 29071
Query: 522 LQPASVRCLEDNTSLCQNCDW 584
LQP +V C+ +N SLCQ C W
Sbjct: 29070 LQPTAVHCMNENVSLCQGCQW 29008
Score = 38.6 bits (78), Expect(2) = 5e-034
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS ++ +IWS
Sbjct: 28983 GHRLQSLNPYSDCPSPSDFGKIWS 28912
>gb|DR749726.1|DR749726 96-L020592-065-004-H12-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 004-H12, mRNA sequence
Length = 866
Score = 127 bits (273), Expect(2) = 7e-034
Identities = 43/73 (58%), Positives = 58/73 (79%)
Frame = +3 / +2
Query: 366 MVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRC 545
M LC FCG ++++IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C LQP +V C
Sbjct: 74 MEALCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 253
Query: 546 LEDNTSLCQNCDW 584
+ +N SLCQ C W
Sbjct: 254 MNENVSLCQGCQW 292
Score = 38.6 bits (78), Expect(2) = 7e-034
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS ++ +IWS
Sbjct: 317 GHRLQSLNPYSDCPSPSDFGKIWS 388
>gb|DR751089.1|DR751089 25-L021269-065-004-H12S-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 004-H12, mRNA sequence
Length = 582
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 42/69 (60%), Positives = 56/69 (81%)
Frame = +3 / +3
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG ++S+IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C LQP +V C+ +N
Sbjct: 111 CDFCGTEKSLIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNEN 290
Query: 558 TSLCQNCDW 584
SLCQ C W
Sbjct: 291 VSLCQGCQW 317
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS + S+IWS
Sbjct: 342 GHRLQSLNPYSDCPSPSHFSKIWS 413
>ref|NM_117613.2| Arabidopsis thaliana transcription factor/ zinc ion binding
AT4G15250 mRNA, complete cds
Length = 993
Score = 125 bits (267), Expect(2) = 5e-033
Identities = 41/69 (59%), Positives = 56/69 (81%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C FCG ++++IYC+SD+A LCL+CD +VHSAN LS+RH R+LLC++C LQP +V C+ +N
Sbjct: 13 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNEN 192
Query: 558 TSLCQNCDW 584
SLCQ C W
Sbjct: 193 VSLCQGCQW 219
Score = 38.6 bits (78), Expect(2) = 5e-033
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 615 GHKRQAINCYSGCPSSAELSRIWS 686
GH+ Q++N YS CPS ++ +IWS
Sbjct: 244 GHRLQSLNPYSDCPSPSDFGKIWS 315
>dbj|AP000739.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MEK6
Length = 6184
Score = 117 bits (250), Expect(2) = 1e-032
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +3 / +3
Query: 348 LILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQ 527
+I+S M P C C +++IYC+SD A LCL+CD VHSAN LS RH R+L+C++C Q
Sbjct: 3819 IIMSPSMEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQ 3998
Query: 528 PASVRCLEDNTSLCQNCDWN 587
PA++RCL++ S CQ C W+
Sbjct: 3999 PAAIRCLDEKVSYCQGCHWH 4058
Score = 45.1 bits (92), Expect(2) = 1e-032
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 591 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIP 704
H++ GH+ Q++N +SGCPS + +R+WS I + P
Sbjct: 4056 HESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILEPP 4169
>ref|NM_113084.1| Arabidopsis thaliana transcription factor/ zinc ion binding
AT3G21880 mRNA, complete cds
Length = 1095
Score = 113 bits (242), Expect(2) = 1e-031
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3 / +1
Query: 366 MVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRC 545
M P C C +++IYC+SD A LCL+CD VHSAN LS RH R+L+C++C QPA++RC
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRC 180
Query: 546 LEDNTSLCQNCDWN 587
L++ S CQ C W+
Sbjct: 181 LDEKVSYCQGCHWH 222
Score = 45.1 bits (92), Expect(2) = 1e-031
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 591 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIP 704
H++ GH+ Q++N +SGCPS + +R+WS I + P
Sbjct: 220 HESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILEPP 333
>gb|DR750961.1|DR750961 30-L021271-065-005-D09S-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D09, mRNA sequence
Length = 463
Score = 116 bits (248), Expect(2) = 1e-031
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +3 / +2
Query: 354 LSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPA 533
+S M P C C +++IYC+SD A LCL+CD VHSAN LS RH R+L+C +C QPA
Sbjct: 104 MSPSMEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICQKCFSQPA 283
Query: 534 SVRCLEDNTSLCQNCDWN 587
++RCL++N S CQ C W+
Sbjct: 284 AIRCLDENVSYCQGCHWH 337
Score = 42.3 bits (86), Expect(2) = 1e-031
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 591 HDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIP 704
H++ GH Q++N ++GCPS + +R+WS I + P
Sbjct: 335 HESNCSELGHTVQSLNPFAGCPSPTDFNRMWSAIPEPP 448
>emb|BX814831.1|CNS0AANX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS10ZA09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1584
Score = 125 bits (268), Expect(2) = 4e-031
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 435 LCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGAS 614
LCL CD+ VH+AN LSR+H R+ +CD CG +P SVRC DN LCQ CDW+ H + S +
Sbjct: 206 LCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSD 385
Query: 615 GHKRQAINCYSGCPSSAELSRIW 683
H R A+ +SGCPS+ EL+ +W
Sbjct: 386 AHVRSAVEGFSGCPSALELAALW 454
Score = 31.8 bits (63), Expect(2) = 4e-031
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 378 CGFCGKQRSMIYCRSDAAS 434
C FCG++ ++++CR+D A+
Sbjct: 150 CDFCGERTAVLFCRADTAN 206
>emb|BX821321.1|CNS0A96S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL33ZH05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1525
Score = 125 bits (268), Expect(2) = 5e-030
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 435 LCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGAS 614
LCL CD+ VHSAN LSR+H R+ +CD C +P SVRC DN LCQ CDW+ H + S ++
Sbjct: 268 LCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSA 447
Query: 615 GHKRQAINCYSGCPSSAELSRIW 683
H+R A+ +SGCPS EL+ +W
Sbjct: 448 THERSAVEGFSGCPSVLELAAVW 516
Score = 28.1 bits (55), Expect(2) = 5e-030
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 384 FCGKQRSMIYCRSDAAS 434
FCG++ ++++CR+D A+
Sbjct: 218 FCGERTAVLFCRADTAN 268
>emb|BX820857.1|CNS0AACO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH76ZA04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1487
Score = 121 bits (258), Expect(2) = 9e-030
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +3 / +1
Query: 435 LCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGAS 614
LCL CD VHSAN LSR+H R+ +CD C +P SVRC DN LCQ C W+ H + S ++
Sbjct: 232 LCLPCDHHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECYWDVHGSCSSSA 411
Query: 615 GHKRQAINCYSGCPSSAELSRIW 683
H+R A+ +SGCPS EL+ +W
Sbjct: 412 THERSAVEGFSGCPSVLELAAVW 480
Score = 31.8 bits (63), Expect(2) = 9e-030
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3 / +2
Query: 369 VPLCGFCGKQRSMIYCRSDAAS 434
V C FCG++ ++++CR+D A+
Sbjct: 167 VVACEFCGERTAVLFCRADTAN 232
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,776,378,455
Number of Sequences: 1013581
Number of extensions: 27445234
Number of successful extensions: 247039
Number of sequences better than 1.0e-020: 106
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 53675906372
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)