TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5532690.2.1
(863 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_121094.2| Arabidopsis thaliana hydrolase, hydrolyzin... 153 1e-065
gb|AY057483.1| Arabidopsis thaliana AT5g10560/F12B17_90 mRN... 153 1e-065
dbj|AK117237.1| Arabidopsis thaliana At5g10560 mRNA for put... 153 1e-065
emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome... 120 7e-062
gb|CW799122.1|CW799122 WiscDsLox322D02 Arabidopsis thaliana... 120 6e-047
dbj|AK221979.1| Arabidopsis thaliana mRNA for beta-xylosida... 83 1e-044
ref|NM_121010.2| Arabidopsis thaliana BXL3 (BETA-XYLOSIDASE... 79 1e-043
gb|AY053409.1| Arabidopsis thaliana AT5g09730/F17I14_80 mRN... 79 1e-043
emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome... 63 1e-040
dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosom... 63 1e-040
gb|CK121019.1|CK121019 205b06.p1 AtM1 Arabidopsis thaliana ... 64 4e-039
gb|AY143952.1| Arabidopsis thaliana At1g02640/T14P4_11 mRNA... 76 2e-038
dbj|AK221967.1| Arabidopsis thaliana mRNA for beta-xylosida... 88 2e-038
gb|AF367266.1|AF367266 Arabidopsis thaliana At1g02640/T14P4... 76 2e-038
ref|NM_100144.2| Arabidopsis thaliana BXL2 (BETA-XYLOSIDASE... 76 3e-038
emb|BX816519.1|CNS0AEJX Arabidopsis thaliana Full-length cD... 76 3e-038
emb|CQ805050.1| Sequence 1461 from Patent WO2004035798 88 4e-038
gb|AY080756.1| Arabidopsis thaliana At5g64570 mRNA sequence 88 4e-038
ref|NM_125853.2| Arabidopsis thaliana XYL4; hydrolase, hydr... 88 4e-038
gb|BX834212.1|BX834212 BX834212 Arabidopsis thaliana Adult ... 76 1e-037
gb|BX835114.1|BX835114 BX835114 Arabidopsis thaliana Flower... 76 2e-037
gb|AY064977.1| Arabidopsis thaliana At1g78060/F28K19_32 mRN... 99 2e-037
ref|NM_106455.2| Arabidopsis thaliana hydrolase, hydrolyzin... 99 2e-037
emb|CQ804774.1| Sequence 1185 from Patent WO2004035798 84 2e-035
gb|AY120767.1| Arabidopsis thaliana xylosidase (At5g49360) ... 84 3e-035
ref|NM_124313.2| Arabidopsis thaliana BXL1 (BETA-XYLOSIDASE... 84 4e-035
ref|NM_121007.1| Arabidopsis thaliana hydrolase, hydrolyzin... 81 5e-035
ref|NM_112852.1| Arabidopsis thaliana hydrolase, hydrolyzin... 77 2e-034
gb|CW842241.1|CW842241 ET12156.Ds3.09.23.2003.jx26.733 Arab... 76 5e-034
gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis tha... 55 1e-033
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 76 2e-033
emb|BX816501.1|CNS0ABUW Arabidopsis thaliana Full-length cD... 54 9e-031
gb|CW793948.1|CW793948 WiscDsLox353H03 Arabidopsis thaliana... 55 1e-030
dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosom... 62 4e-030
emb|BX829437.1|CNS0A1IM Arabidopsis thaliana Full-length cD... 81 2e-029
gb|BX835281.1|BX835281 BX835281 Arabidopsis thaliana Flower... 48 2e-028
gb|CK119681.1|CK119681 211d20.p1 AtM1 Arabidopsis thaliana ... 88 3e-028
gb|CK120608.1|CK120608 206p04.p1 AtM1 Arabidopsis thaliana ... 88 1e-027
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 76 2e-027
gb|CW839589.1|CW839589 GT8592.Ds3.04.19.2002.jw24.541 Arabi... 50 2e-027
dbj|AB023034.1| Arabidopsis thaliana genomic DNA, chromosom... 64 2e-026
gb|BP589175.1|BP589175 BP589175 RAFL15 Arabidopsis thaliana... 120 7e-026
gb|BP604928.1|BP604928 BP604928 RAFL16 Arabidopsis thaliana... 120 7e-026
gb|BP611267.1|BP611267 BP611267 RAFL16 Arabidopsis thaliana... 120 7e-026
gb|BP619691.1|BP619691 BP619691 RAFL16 Arabidopsis thaliana... 120 7e-026
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 120 7e-026
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 120 7e-026
gb|BX836799.1|BX836799 BX836799 Arabidopsis thaliana Flower... 79 1e-025
gb|BP595027.1|BP595027 BP595027 RAFL15 Arabidopsis thaliana... 118 2e-025
gb|BP602652.1|BP602652 BP602652 RAFL16 Arabidopsis thaliana... 118 2e-025
gb|AV563651.1|AV563651 AV563651 Arabidopsis thaliana green ... 79 3e-025
gb|AI992423.1|AI992423 701557689 A. thaliana, Ohio State cl... 76 3e-025
dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosom... 54 2e-024
emb|BX827044.1|CNS0A3C2 Arabidopsis thaliana Full-length cD... 62 4e-024
gb|BP612934.1|BP612934 BP612934 RAFL16 Arabidopsis thaliana... 113 9e-024
gb|BE522518.1|BE522518 M26D1STM Arabidopsis developing seed... 109 1e-022
emb|AL806723.1| Arabidopsis thaliana transposon insertion S... 55 3e-021
emb|AL806726.1| Arabidopsis thaliana transposon insertion S... 55 3e-021
gb|H76803.1|H76803 17234 Lambda-PRL2 Arabidopsis thaliana c... 76 4e-021
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 55 6e-021
>ref|NM_121094.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G10560 mRNA, complete cds
Length = 2474
Score = 153 bits (328), Expect(2) = 1e-065
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRADPSR 684
DPRI SI+W+GYPGE GGQ L EI+FG++NPGG+LP TWYPESFT + M+DM+MRA+ SR
Sbjct: 1699 DPRIGSIIWIGYPGETGGQALAEIIFGDFNPGGRLPTTWYPESFTDVAMSDMHMRANSSR 1878
Query: 683 GYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVS 561
GYPGRTYRFYTG V AP ++++S
Sbjct: 1879 GYPGRTYRFYTGPQVYSFGTGLSYTKFEYKILSAPIRLSLS 2001
Score = 120 bits (256), Expect(2) = 1e-065
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / +1
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 2086 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 2265
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 2266 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 2394
Score = 117 bits (251), Expect(2) = 3e-030
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +1 / -1
Query: 559 NDTVIFFGAKEMLYEYLE*LKPYPKPYTTSPV*NRYVLPG*PREGSALMFISVMGIAVKD 738
+D + GA ++LY *LKP PK T PV*N YVLPG PR+ ALM IS + +V D
Sbjct: 2003 SDKLSLIGADKILYSNFV*LKPVPKL*T*GPV*NLYVLPGYPRDELALMCISDIATSVND 1824
Query: 739 SGYQVIGSFPPGLYSPKRISGRTCPPTSPGYPSQRMLAIRG 861
SGY V+G+ PPGL SP IS CPP SPG P Q ML I G
Sbjct: 1823 SGYHVVGNLPPGLKSPNMISASACPPVSPG*PIQIMLPILG 1701
Score = 36.8 bits (74), Expect(2) = 3e-030
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +1 / -1
Query: 340 TRSKPTSCFIGKPGTLDFDLANRRTA*LPSMLP*FETAT*TENTRASHD 486
TRS P SCF G P N T *LPS+ P T T T N R S +
Sbjct: 2237 TRS*PISCFSGTPDKTGGIFENSITT*LPSISPVLLT*TRTLNRRDSQE 2091
>gb|AY057483.1| Arabidopsis thaliana AT5g10560/F12B17_90 mRNA, complete cds
Length = 2467
Score = 153 bits (328), Expect(2) = 1e-065
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRADPSR 684
DPRI SI+W+GYPGE GGQ L EI+FG++NPGG+LP TWYPESFT + M+DM+MRA+ SR
Sbjct: 1699 DPRIGSIIWIGYPGETGGQALAEIIFGDFNPGGRLPTTWYPESFTDVAMSDMHMRANSSR 1878
Query: 683 GYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVS 561
GYPGRTYRFYTG V AP ++++S
Sbjct: 1879 GYPGRTYRFYTGPQVYSFGTGLSYTKFEYKILSAPIRLSLS 2001
Score = 120 bits (256), Expect(2) = 1e-065
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / +1
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 2086 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 2265
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 2266 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 2394
Score = 117 bits (251), Expect(2) = 3e-030
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +1 / -3
Query: 559 NDTVIFFGAKEMLYEYLE*LKPYPKPYTTSPV*NRYVLPG*PREGSALMFISVMGIAVKD 738
+D + GA ++LY *LKP PK T PV*N YVLPG PR+ ALM IS + +V D
Sbjct: 2003 SDKLSLIGADKILYSNFV*LKPVPKL*T*GPV*NLYVLPGYPRDELALMCISDIATSVND 1824
Query: 739 SGYQVIGSFPPGLYSPKRISGRTCPPTSPGYPSQRMLAIRG 861
SGY V+G+ PPGL SP IS CPP SPG P Q ML I G
Sbjct: 1823 SGYHVVGNLPPGLKSPNMISASACPPVSPG*PIQIMLPILG 1701
Score = 36.8 bits (74), Expect(2) = 3e-030
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +1 / -3
Query: 340 TRSKPTSCFIGKPGTLDFDLANRRTA*LPSMLP*FETAT*TENTRASHD 486
TRS P SCF G P N T *LPS+ P T T T N R S +
Sbjct: 2237 TRS*PISCFSGTPDKTGGIFENSITT*LPSISPVLLT*TRTLNRRDSQE 2091
>dbj|AK117237.1| Arabidopsis thaliana At5g10560 mRNA for putative beta-xylosidase,
complete cds, clone: RAFL16-78-O20
Length = 2433
Score = 153 bits (328), Expect(2) = 1e-065
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -1 / +2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRADPSR 684
DPRI SI+W+GYPGE GGQ L EI+FG++NPGG+LP TWYPESFT + M+DM+MRA+ SR
Sbjct: 1664 DPRIGSIIWIGYPGETGGQALAEIIFGDFNPGGRLPTTWYPESFTDVAMSDMHMRANSSR 1843
Query: 683 GYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVS 561
GYPGRTYRFYTG V AP ++++S
Sbjct: 1844 GYPGRTYRFYTGPQVYSFGTGLSYTKFEYKILSAPIRLSLS 1966
Score = 120 bits (256), Expect(2) = 1e-065
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / +2
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 2051 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 2230
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 2231 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 2359
Score = 117 bits (251), Expect(2) = 3e-030
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +1 / -1
Query: 559 NDTVIFFGAKEMLYEYLE*LKPYPKPYTTSPV*NRYVLPG*PREGSALMFISVMGIAVKD 738
+D + GA ++LY *LKP PK T PV*N YVLPG PR+ ALM IS + +V D
Sbjct: 1968 SDKLSLIGADKILYSNFV*LKPVPKL*T*GPV*NLYVLPGYPRDELALMCISDIATSVND 1789
Query: 739 SGYQVIGSFPPGLYSPKRISGRTCPPTSPGYPSQRMLAIRG 861
SGY V+G+ PPGL SP IS CPP SPG P Q ML I G
Sbjct: 1788 SGYHVVGNLPPGLKSPNMISASACPPVSPG*PIQIMLPILG 1666
Score = 36.8 bits (74), Expect(2) = 3e-030
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +1 / -1
Query: 340 TRSKPTSCFIGKPGTLDFDLANRRTA*LPSMLP*FETAT*TENTRASHD 486
TRS P SCF G P N T *LPS+ P T T T N R S +
Sbjct: 2202 TRS*PISCFSGTPDKTGGIFENSITT*LPSISPVLLT*TRTLNRRDSQE 2056
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
Length = 113053
Score = 120 bits (256), Expect(3) = 7e-062
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / +3
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 28218 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 28397
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 28398 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 28526
Score = 90.4 bits (191), Expect(3) = 7e-062
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = -1 / +3
Query: 770 GGKLPITWYPESFTAIPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXX 591
GG+LP TWYPESFT + M+DM+MRA+ SRGYPGRTYRFYTG V
Sbjct: 27924 GGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKI 28103
Query: 590 SLAPKKITVS 561
AP ++++S
Sbjct: 28104 LSAPIRLSLS 28133
Score = 80.3 bits (169), Expect(3) = 4e-027
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +1 / -1
Query: 559 NDTVIFFGAKEMLYEYLE*LKPYPKPYTTSPV*NRYVLPG*PREGSALMFISVMGIAVKD 738
+D + GA ++LY *LKP PK T PV*N YVLPG PR+ ALM IS + +V D
Sbjct: 28135 SDKLSLIGADKILYSNFV*LKPVPKL*T*GPV*NLYVLPGYPRDELALMCISDIATSVND 27956
Query: 739 SGYQVIGSFPPGL 777
SGY V+G+ PP L
Sbjct: 27955 SGYHVVGNLPPTL 27917
Score = 68.4 bits (143), Expect(3) = 7e-062
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1 / +2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPG 768
DPRI SI+W+GYPGE GGQ L EI+FG++NPG
Sbjct: 27719 DPRIGSIIWIGYPGETGGQALAEIIFGDFNPG 27814
Score = 44.6 bits (91), Expect(3) = 4e-027
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +1 / -2
Query: 769 PGLYSPKRISGRTCPPTSPGYPSQRMLAIRG 861
PGL SP IS CPP SPG P Q ML I G
Sbjct: 27813 PGLKSPNMISASACPPVSPG*PIQIMLPILG 27721
Score = 36.8 bits (74), Expect(3) = 4e-027
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +1 / -1
Query: 340 TRSKPTSCFIGKPGTLDFDLANRRTA*LPSMLP*FETAT*TENTRASHD 486
TRS P SCF G P N T *LPS+ P T T T N R S +
Sbjct: 28369 TRS*PISCFSGTPDKTGGIFENSITT*LPSISPVLLT*TRTLNRRDSQE 28223
>gb|CW799122.1|CW799122 WiscDsLox322D02 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 871
Score = 120 bits (256), Expect(2) = 6e-047
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -3
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 494 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 315
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 314 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 186
Score = 90.4 bits (191), Expect(2) = 6e-047
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = -1 / -3
Query: 770 GGKLPITWYPESFTAIPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXX 591
GG+LP TWYPESFT + M+DM+MRA+ SRGYPGRTYRFYTG V
Sbjct: 788 GGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKI 609
Query: 590 SLAPKKITVS 561
AP ++++S
Sbjct: 608 LSAPIRLSLS 579
>dbj|AK221979.1| Arabidopsis thaliana mRNA for beta-xylosidase - like protein,
partial cds, clone: RAFL22-58-K12
Length = 934
Score = 82.6 bits (174), Expect(4) = 1e-044
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I SI+W+GYPGE GG +P+++FG +NP G LP+TWYP+S+
Sbjct: 184 DKKITSIMWVGYPGEAGGLAIPDVIFGRHNPSGNLPMTWYPQSY 315
Score = 63.4 bits (132), Expect(4) = 1e-044
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 325 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 492
Score = 61.1 bits (127), Expect(4) = 1e-044
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 664 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 843
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 844 SLNISV* 864
Score = 31.8 bits (63), Expect(4) = 1e-044
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 583 FEVHLNVKNTGDRAGSHTVFLFTTS 657
>ref|NM_121010.2| Arabidopsis thaliana BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing
O-glycosyl compounds AT5G09730 (BXL3) mRNA, complete cds
Length = 2430
Score = 79.0 bits (166), Expect(4) = 1e-043
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I SI+W+GYPGE GG + +++FG +NP G LP+TWYP+S+
Sbjct: 1678 DKKITSIMWVGYPGEAGGLAIADVIFGRHNPSGNLPMTWYPQSY 1809
Score = 63.4 bits (132), Expect(4) = 1e-043
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 1819 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 1986
Score = 61.1 bits (127), Expect(4) = 1e-043
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 2158 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 2337
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 2338 SLNISV* 2358
Score = 31.8 bits (63), Expect(4) = 1e-043
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 2077 FEVHLNVKNTGDRAGSHTVFLFTTS 2151
>gb|AY053409.1| Arabidopsis thaliana AT5g09730/F17I14_80 mRNA, complete cds
Length = 2418
Score = 79.0 bits (166), Expect(4) = 1e-043
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I SI+W+GYPGE GG + +++FG +NP G LP+TWYP+S+
Sbjct: 1678 DKKITSIMWVGYPGEAGGLAIADVIFGRHNPSGNLPMTWYPQSY 1809
Score = 63.4 bits (132), Expect(4) = 1e-043
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 1819 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 1986
Score = 61.1 bits (127), Expect(4) = 1e-043
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 2158 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 2337
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 2338 SLNISV* 2358
Score = 31.8 bits (63), Expect(4) = 1e-043
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 2077 FEVHLNVKNTGDRAGSHTVFLFTTS 2151
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project)
Length = 92491
Score = 63.4 bits (132), Expect(5) = 1e-040
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 32863 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 33030
Score = 61.1 bits (127), Expect(5) = 1e-040
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 33202 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 33381
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 33382 SLNISV* 33402
Score = 57.9 bits (120), Expect(4) = 3e-026
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1 / +2
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT+MNMR D S GY GRTYRFY G+ V APK ++++L
Sbjct: 44462 VPMTNMNMRPDKSNGYLGRTYRFYIGETVYAFGDGLSYTNFSHQLIKAPKFVSLNL 44629
Score = 56.1 bits (116), Expect(4) = 3e-026
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = -1 / +2
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G P KQL+GFE++ + V VD CK + + GKR L LG H+L VG +
Sbjct: 44801 VHGSPRKQLLGFEKIRLGKKEETVVRFKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKH 44980
Query: 203 ELSIEL*QG 177
+I +* G
Sbjct: 44981 SFNISV**G 45007
Score = 54.2 bits (112), Expect(5) = 1e-040
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKL 759
D +I SI+W+GYPGE GG + +++FG +NP L
Sbjct: 32629 DKKITSIMWVGYPGEAGGLAIADVIFGRHNPSNTL 32733
Score = 52.8 bits (109), Expect(4) = 3e-026
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKL 759
D +I SI+W+GYPGE GG + +++FG +NP L
Sbjct: 44226 DEKITSIMWVGYPGEAGGIAIADVIFGRHNPSKTL 44330
Score = 34.1 bits (68), Expect(4) = 3e-026
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 770 GGKLPITWYPESF 732
GGKLP+TWYP+S+
Sbjct: 44414 GGKLPMTWYPQSY 44452
Score = 31.8 bits (63), Expect(5) = 1e-040
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / +1
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 33121 FEVHLNVKNTGDRAGSHTVFLFTTS 33195
Score = 31.8 bits (63), Expect(5) = 1e-040
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 770 GGKLPITWYPESF 732
GG LP+TWYP+S+
Sbjct: 32815 GGNLPMTWYPQSY 32853
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16
Length = 68098
Score = 63.4 bits (132), Expect(5) = 1e-040
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / -1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 36721 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 36554
Score = 61.1 bits (127), Expect(5) = 1e-040
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / -1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 36382 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 36203
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 36202 SLNISV* 36182
Score = 57.9 bits (120), Expect(4) = 1e-026
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1 / -2
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT+MNMR D S GY GRTYRFY G+ V APK ++++L
Sbjct: 25122 VPMTNMNMRPDKSNGYLGRTYRFYIGETVYAFGDGLSYTNFSHQLIKAPKFVSLNL 24955
Score = 56.1 bits (116), Expect(4) = 1e-026
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = -1 / -2
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G P KQL+GFE++ + V VD CK + + GKR L LG H+L VG +
Sbjct: 24783 VHGSPRKQLLGFEKIRLGKKEETVVRFKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKH 24604
Query: 203 ELSIEL*QG 177
+I +* G
Sbjct: 24603 SFNISV**G 24577
Score = 54.2 bits (112), Expect(5) = 1e-040
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1 / -1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKL 759
D +I SI+W+GYPGE GG + +++FG +NP L
Sbjct: 36955 DKKITSIMWVGYPGEAGGLAIADVIFGRHNPSNTL 36851
Score = 52.8 bits (109), Expect(4) = 1e-026
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1 / -3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKL 759
D +I SI+W+GYPGE GG + +++FG +NP L
Sbjct: 25358 DEKITSIMWVGYPGEAGGIAIADVIFGRHNPSKTL 25254
Score = 34.1 bits (68), Expect(4) = 1e-026
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 770 GGKLPITWYPESF 732
GGKLP+TWYP+S+
Sbjct: 25170 GGKLPMTWYPQSY 25132
Score = 31.8 bits (63), Expect(5) = 1e-040
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / -1
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 36463 FEVHLNVKNTGDRAGSHTVFLFTTS 36389
Score = 31.8 bits (63), Expect(5) = 1e-040
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 770 GGKLPITWYPESF 732
GG LP+TWYP+S+
Sbjct: 36769 GGNLPMTWYPQSY 36731
>gb|CK121019.1|CK121019 205b06.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B06205
5-PRIME, mRNA sequence
Length = 702
Score = 63.8 bits (133), Expect(4) = 4e-039
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = -1 / +2
Query: 833 GYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
GYPGE GG + +++FG +NP G LP+TWYP+S+
Sbjct: 2 GYPGEAGGLAIADVIFGRHNPSGNLPMTWYPQSY 103
Score = 63.4 bits (132), Expect(4) = 4e-039
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1 / +2
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PM++MNMR D S+GYPGR+YRFYTG+ V AP+ +++SL
Sbjct: 113 VPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSL 280
Score = 61.1 bits (127), Expect(4) = 4e-039
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +2
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G PIKQL+GFE++ + V V+ CK +S + GKR + LG H+L VG +
Sbjct: 452 VHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKH 631
Query: 203 ELSIEL* 183
L+I +*
Sbjct: 632 SLNISV* 652
Score = 31.8 bits (63), Expect(4) = 4e-039
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / +2
Query: 467 FSVHVAVSNHGSMDGSHAVLLFARS 393
F VH+ V N G GSH V LF S
Sbjct: 371 FEVHLNVKNTGDRAGSHTVFLFTTS 445
>gb|AY143952.1| Arabidopsis thaliana At1g02640/T14P4_11 mRNA, complete cds
Length = 2307
Score = 76.2 bits (160), Expect(4) = 2e-038
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 1624 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 1755
Score = 63.4 bits (132), Expect(4) = 2e-038
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / +1
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 2095 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 2274
Query: 191 E 189
+
Sbjct: 2275 Q 2277
Score = 47.3 bits (97), Expect(4) = 2e-038
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 1759 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 1851
Score = 40.0 bits (81), Expect(4) = 2e-038
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +1
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 1981 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 2070
>dbj|AK221967.1| Arabidopsis thaliana mRNA for beta-xylosidase, partial cds, clone:
RAFL22-56-H01
Length = 1656
Score = 88.1 bits (186), Expect(3) = 2e-038
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 889 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 1020
Score = 59.7 bits (124), Expect(3) = 2e-038
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 1030 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 1197
Score = 58.3 bits (121), Expect(3) = 2e-038
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1 / +1
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
++ G P K LVGFE++ + V V+ CK +S + GKR + LG H+L VGD +
Sbjct: 1369 AIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLK 1548
Query: 206 FELSIEL* 183
LSI +*
Sbjct: 1549 HSLSIRI* 1572
>gb|AF367266.1|AF367266 Arabidopsis thaliana At1g02640/T14P4_11 mRNA, complete cds
Length = 2479
Score = 76.2 bits (160), Expect(4) = 2e-038
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 1712 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 1843
Score = 63.4 bits (132), Expect(4) = 2e-038
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / +2
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 2183 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 2362
Query: 191 E 189
+
Sbjct: 2363 Q 2365
Score = 47.3 bits (97), Expect(4) = 2e-038
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +2
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 1847 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 1939
Score = 40.0 bits (81), Expect(4) = 2e-038
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 2069 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 2158
>ref|NM_100144.2| Arabidopsis thaliana BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing
O-glycosyl compounds AT1G02640 (BXL2) mRNA, complete cds
Length = 2584
Score = 76.2 bits (160), Expect(4) = 3e-038
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 1712 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 1843
Score = 63.4 bits (132), Expect(4) = 3e-038
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / +2
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 2183 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 2362
Query: 191 E 189
+
Sbjct: 2363 Q 2365
Score = 47.3 bits (97), Expect(4) = 3e-038
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +2
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 1847 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 1939
Score = 40.0 bits (81), Expect(4) = 3e-038
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 2069 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 2158
>emb|BX816519.1|CNS0AEJX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH53ZF04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2459
Score = 76.2 bits (160), Expect(4) = 3e-038
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 1708 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 1839
Score = 63.4 bits (132), Expect(4) = 3e-038
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / +1
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 2179 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 2358
Query: 191 E 189
+
Sbjct: 2359 Q 2361
Score = 47.3 bits (97), Expect(4) = 3e-038
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 1843 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 1935
Score = 39.6 bits (80), Expect(4) = 3e-038
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / +1
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLF 402
A C+ L VHV V+N GS DG+H +L+F
Sbjct: 2065 ARCDRLSLGVHVEVTNVGSRDGTHTMLVF 2151
>emb|CQ805050.1| Sequence 1461 from Patent WO2004035798
Length = 2355
Score = 88.1 bits (186), Expect(3) = 4e-038
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 1672 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 1803
Score = 59.7 bits (124), Expect(3) = 4e-038
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 1813 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 1980
Score = 58.3 bits (121), Expect(3) = 4e-038
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1 / +1
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
++ G P K LVGFE++ + V V+ CK +S + GKR + LG H+L VGD +
Sbjct: 2152 AIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLK 2331
Query: 206 FELSIEL* 183
LSI +*
Sbjct: 2332 HSLSIRI* 2355
>gb|AY080756.1| Arabidopsis thaliana At5g64570 mRNA sequence
Length = 2488
Score = 88.1 bits (186), Expect(3) = 4e-038
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 1696 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 1827
Score = 59.7 bits (124), Expect(3) = 4e-038
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 1837 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 2004
Score = 58.3 bits (121), Expect(3) = 4e-038
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1 / +1
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
++ G P K LVGFE++ + V V+ CK +S + GKR + LG H+L VGD +
Sbjct: 2176 AIHGSPRKHLVGFEKIRLGKREEAVVSFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLK 2355
Query: 206 FELSIEL* 183
LSI +*
Sbjct: 2356 HSLSIRI* 2379
>ref|NM_125853.2| Arabidopsis thaliana XYL4; hydrolase, hydrolyzing O-glycosyl
compounds AT5G64570 (XYL4) mRNA, complete cds
Length = 2493
Score = 88.1 bits (186), Expect(3) = 4e-038
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 1698 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 1829
Score = 59.7 bits (124), Expect(3) = 4e-038
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / +3
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 1839 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 2006
Score = 58.3 bits (121), Expect(3) = 4e-038
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1 / +3
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
++ G P K LVGFE++ + V V+ CK +S + GKR + LG H+L VGD +
Sbjct: 2178 AIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLK 2357
Query: 206 FELSIEL* 183
LSI +*
Sbjct: 2358 HSLSIRI* 2381
>gb|BX834212.1|BX834212 BX834212 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS34ZG06 3PRIM, mRNA
sequence
Length = 1182
Score = 76.2 bits (160), Expect(4) = 1e-037
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 719 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 588
Score = 60.6 bits (126), Expect(4) = 1e-037
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -1 / -1
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G ++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 249 PKKQLVAFERVHVAVGEKKREQVNIHVCKYLSVVDRAGNRRMPIGDHGIHIGDESHTVSL 70
Query: 191 E 189
+
Sbjct: 69 Q 67
Score = 47.3 bits (97), Expect(4) = 1e-037
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / -2
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 584 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 492
Score = 36.8 bits (74), Expect(4) = 1e-037
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1 / -2
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLL 405
A C+ L VHV V+N GS DG+H +L+
Sbjct: 362 ARCDRLSLGVHVEVTNVGSRDGTHTMLV 279
>gb|BX835114.1|BX835114 BX835114 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB33ZG03 3PRIM, mRNA sequence
Length = 1097
Score = 76.2 bits (160), Expect(4) = 2e-037
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 709 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 578
Score = 57.4 bits (119), Expect(4) = 2e-037
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = -1 / -3
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G ++ + CK++S + G + +G H + +GDE +S+
Sbjct: 240 PKKQLVAFERVHVAVGEKKREQVNIHVCKYLSVVDRAGNPTIPIGDHGIHIGDEIHTVSL 61
Query: 191 E 189
+
Sbjct: 60 Q 58
Score = 47.3 bits (97), Expect(4) = 2e-037
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / -2
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 574 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 482
Score = 39.6 bits (80), Expect(4) = 2e-037
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / -2
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLF 402
A C+ L VHV V+N GS DG+H +L+F
Sbjct: 352 ARCDRLSLGVHVEVTNVGSRDGTHTMLVF 266
>gb|AY064977.1| Arabidopsis thaliana At1g78060/F28K19_32 mRNA, complete cds
Length = 2428
Score = 99.1 bits (210), Expect(4) = 2e-037
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -1 / +3
Query: 857 RIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRA 696
+I SI+W GYPGE GG + EI+FG++NPGG+LP+TWYP+SF I MTDM MR+
Sbjct: 1671 KIGSIIWAGYPGEAGGIAISEIIFGDHNPGGRLPVTWYPQSFVNIQMTDMRMRS 1832
Score = 55.1 bits (114), Expect(4) = 2e-037
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = -1 / +3
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL 186
KQLVGF+ + + G + +E + C+H+S AN G VL G + LTVGD E L + +
Sbjct: 2157 KQLVGFKSIVLSNGEKAEMEFEIGLCEHLSRANEFGVMVLEEGKYFLTVGDSELPLIVNV 2336
Query: 185 * 183
*
Sbjct: 2337 * 2339
Score = 35.4 bits (71), Expect(4) = 2e-037
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 707 NMRADPSRGYPGRTYRFYTGDVV 639
+MR + GYPGRTY+FY G V
Sbjct: 1815 DMRMRSATGYPGRTYKFYKGPKV 1883
Score = 34.1 bits (68), Expect(4) = 2e-037
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 482 CEALVFSVHVAVSNHGSMDGSHAVLLFAR 396
C+ V V V N G M G H VL+FAR
Sbjct: 2034 CDVAKTKVTVEVENQGEMAGKHPVLMFAR 2120
>ref|NM_106455.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G78060 mRNA, complete cds
Length = 2477
Score = 99.1 bits (210), Expect(4) = 2e-037
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -1 / +3
Query: 857 RIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRA 696
+I SI+W GYPGE GG + EI+FG++NPGG+LP+TWYP+SF I MTDM MR+
Sbjct: 1692 KIGSIIWAGYPGEAGGIAISEIIFGDHNPGGRLPVTWYPQSFVNIQMTDMRMRS 1853
Score = 55.1 bits (114), Expect(4) = 2e-037
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = -1 / +3
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL 186
KQLVGF+ + + G + +E + C+H+S AN G VL G + LTVGD E L + +
Sbjct: 2178 KQLVGFKSIVLSNGEKAEMEFEIGLCEHLSRANEFGVMVLEEGKYFLTVGDSELPLIVNV 2357
Query: 185 * 183
*
Sbjct: 2358 * 2360
Score = 35.4 bits (71), Expect(4) = 2e-037
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 707 NMRADPSRGYPGRTYRFYTGDVV 639
+MR + GYPGRTY+FY G V
Sbjct: 1836 DMRMRSATGYPGRTYKFYKGPKV 1904
Score = 34.1 bits (68), Expect(4) = 2e-037
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 482 CEALVFSVHVAVSNHGSMDGSHAVLLFAR 396
C+ V V V N G M G H VL+FAR
Sbjct: 2055 CDVAKTKVTVEVENQGEMAGKHPVLMFAR 2141
>emb|CQ804774.1| Sequence 1185 from Patent WO2004035798
Length = 2325
Score = 84.5 bits (178), Expect(4) = 2e-035
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTA 726
DPR+A+I+W GYPG+ GG + I+FG NPGGKLP+TWYP+ + A
Sbjct: 1636 DPRVAAIIWAGYPGQAGGAAIANIIFGAANPGGKLPMTWYPQDYVA 1773
Score = 64.3 bits (134), Expect(4) = 2e-035
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = -1 / +1
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIE 189
KQL+ FE+VH AG+ +V++ VD CKH+ + GKR + +G H L +GD + + ++
Sbjct: 2137 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQ 2313
Score = 34.5 bits (69), Expect(4) = 2e-035
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 689 SRGYPGRTYRFYTGDVV 639
S YPGRTYRFY G VV
Sbjct: 1807 SGNYPGRTYRFYKGPVV 1857
Score = 33.1 bits (66), Expect(4) = 2e-035
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 461 VHVAVSNHGSMDGSHAVLLFA 399
+HV VSN G DG+H V +FA
Sbjct: 2035 LHVEVSNTGEFDGTHTVFVFA 2097
>gb|AY120767.1| Arabidopsis thaliana xylosidase (At5g49360) mRNA, complete cds
Length = 2591
Score = 84.5 bits (178), Expect(4) = 3e-035
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTA 726
DPR+A+I+W GYPG+ GG + I+FG NPGGKLP+TWYP+ + A
Sbjct: 1711 DPRVAAIIWAGYPGQAGGAAIANIIFGAANPGGKLPMTWYPQDYVA 1848
Score = 64.3 bits (134), Expect(4) = 3e-035
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = -1 / +1
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIE 189
KQL+ FE+VH AG+ +V++ VD CKH+ + GKR + +G H L +GD + + ++
Sbjct: 2212 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQ 2388
Score = 34.5 bits (69), Expect(4) = 3e-035
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 689 SRGYPGRTYRFYTGDVV 639
S YPGRTYRFY G VV
Sbjct: 1882 SGNYPGRTYRFYKGPVV 1932
Score = 33.1 bits (66), Expect(4) = 3e-035
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 461 VHVAVSNHGSMDGSHAVLLFA 399
+HV VSN G DG+H V +FA
Sbjct: 2110 LHVEVSNTGEFDGTHTVFVFA 2172
>ref|NM_124313.2| Arabidopsis thaliana BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing
O-glycosyl compounds AT5G49360 (BXL1) mRNA, complete cds
Length = 2708
Score = 84.5 bits (178), Expect(4) = 4e-035
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTA 726
DPR+A+I+W GYPG+ GG + I+FG NPGGKLP+TWYP+ + A
Sbjct: 1719 DPRVAAIIWAGYPGQAGGAAIANIIFGAANPGGKLPMTWYPQDYVA 1856
Score = 64.3 bits (134), Expect(4) = 4e-035
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = -1 / +3
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIE 189
KQL+ FE+VH AG+ +V++ VD CKH+ + GKR + +G H L +GD + + ++
Sbjct: 2220 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQ 2396
Score = 34.5 bits (69), Expect(4) = 4e-035
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 689 SRGYPGRTYRFYTGDVV 639
S YPGRTYRFY G VV
Sbjct: 1890 SGNYPGRTYRFYKGPVV 1940
Score = 33.1 bits (66), Expect(4) = 4e-035
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 461 VHVAVSNHGSMDGSHAVLLFA 399
+HV VSN G DG+H V +FA
Sbjct: 2118 LHVEVSNTGEFDGTHTVFVFA 2180
>ref|NM_121007.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G09700 mRNA, complete cds
Length = 1236
Score = 80.8 bits (170), Expect(3) = 5e-035
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I SI+W+GYPGE GG + +++FG +NP GKLP+TWYP+S+
Sbjct: 556 DEKITSIMWVGYPGEAGGIAIADVIFGRHNPSGKLPMTWYPQSY 687
Score = 57.9 bits (120), Expect(3) = 5e-035
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT+MNMR D S GY GRTYRFY G+ V APK ++++L
Sbjct: 697 VPMTNMNMRPDKSNGYLGRTYRFYIGETVYAFGDGLSYTNFSHQLIKAPKFVSLNL 864
Score = 55.1 bits (114), Expect(3) = 5e-035
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = -1 / +1
Query: 383 VPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEF 204
V G P KQL+GFE++ + V VD CK + + GKR L LG H+L VG +
Sbjct: 1036 VHGSPRKQLLGFEKIRLGKKEETVVRFKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKH 1215
Query: 203 ELSIEL* 183
+I +*
Sbjct: 1216 SFNISV* 1236
>ref|NM_112852.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G19620 mRNA, complete cds
Length = 2346
Score = 77.1 bits (162), Expect(4) = 2e-034
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = -1 / +1
Query: 854 IASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
I ++LW+GYPGE GG + +++FG+YNP G+LP TWYP+ F
Sbjct: 1639 IRAVLWVGYPGEAGGDAIAQVIFGDYNPSGRLPETWYPQEF 1761
Score = 53.8 bits (111), Expect(4) = 2e-034
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -1 / +1
Query: 377 GFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVG 216
G P+ QLVGFERV + D CK +S + GKR L+ G H L +G
Sbjct: 2113 GVPLTQLVGFERVEVGRSMTEKFTVDFDVCKALSLVDTHGKRKLVTGHHKLVIG 2274
Score = 49.6 bits (102), Expect(4) = 2e-034
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTG 648
+ MTDMNMR + + G+PGR+YRFYTG
Sbjct: 1771 VAMTDMNMRPNSTSGFPGRSYRFYTG 1848
Score = 33.1 bits (66), Expect(4) = 2e-034
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1 / +1
Query: 485 SCEALVFSVHVAVSNHGSMDGSHAVLLF 402
+C L + + V NHG GSH VL+F
Sbjct: 1990 NCHDLKIRIVIGVKNHGLRSGSHVVLVF 2073
>gb|CW842241.1|CW842241 ET12156.Ds3.09.23.2003.jx26.733 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET12156, DNA sequence
Length = 733
Score = 76.2 bits (160), Expect(4) = 5e-034
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 162 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 293
Score = 46.9 bits (96), Expect(4) = 5e-034
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +3
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 297 TNLPMTEMSMRPLHSKRIPGRTYRFYDGPVV 389
Score = 43.7 bits (89), Expect(4) = 5e-034
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMS 276
P KQLV FERVH A G V++ + CK++S
Sbjct: 633 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLS 728
Score = 40.0 bits (81), Expect(4) = 5e-034
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +3
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 519 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 608
>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I,
complete sequence
Length = 110565
Score = 55.1 bits (114), Expect(5) = 1e-033
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = -1 / -1
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL 186
KQLVGF+ + + G + +E + C+H+S AN G VL G + LTVGD E L + +
Sbjct: 93243 KQLVGFKSIVLSNGEKAEMEFEIGLCEHLSRANEFGVMVLEEGKYFLTVGDSELPLIVNV 93064
Query: 185 * 183
*
Sbjct: 93063 * 93061
Score = 54.7 bits (113), Expect(5) = 1e-033
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1 / -3
Query: 857 RIASILWLGYPGEVGGQVLPEILFGEYNPG 768
+I SI+W GYPGE GG + EI+FG++NPG
Sbjct: 93826 KIGSIIWAGYPGEAGGIAISEIIFGDHNPG 93737
Score = 50.1 bits (103), Expect(5) = 1e-033
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1 / -1
Query: 770 GGKLPITWYPESFTAIPMTDMNMRA 696
GG+LP+TWYP+SF I MTDM MR+
Sbjct: 93642 GGRLPVTWYPQSFVNIQMTDMRMRS 93568
Score = 34.1 bits (68), Expect(5) = 1e-033
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1 / -1
Query: 482 CEALVFSVHVAVSNHGSMDGSHAVLLFAR 396
C+ V V V N G M G H VL+FAR
Sbjct: 93366 CDVAKTKVTVEVENQGEMAGKHPVLMFAR 93280
Score = 24.0 bits (46), Expect(5) = 1e-033
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 705 HES*SFTRLPWENISILHWRCSVWLWIWFKLLQIFI 598
HE+ + W+++ IL SV +W W LL + +
Sbjct: 93583 HENAVCNWISWKDLQIL*RT*SV*VWSWS*LLSLLL 93476
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
sequence
Length = 121668
Score = 76.2 bits (160), Expect(4) = 2e-033
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 50941 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 50810
Score = 63.4 bits (132), Expect(4) = 2e-033
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / -3
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 50470 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 50291
Query: 191 E 189
+
Sbjct: 50290 Q 50288
Score = 47.3 bits (97), Expect(4) = 2e-033
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 50806 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 50714
Score = 40.0 bits (81), Expect(4) = 2e-033
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / -3
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 50584 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 50495
>emb|BX816501.1|CNS0ABUW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH52ZD04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1515
Score = 53.8 bits (111), Expect(5) = 9e-031
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -1 / -3
Query: 377 GFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVG 216
G P+ QLVGFERV + D CK +S + GKR L+ G H L +G
Sbjct: 214 GVPLTQLVGFERVEVGRSMTEKFTVDFDVCKALSLVDTHGKRKLVTGHHKLVIG 53
Score = 52.4 bits (108), Expect(5) = 9e-031
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1 / -3
Query: 854 IASILWLGYPGEVGGQVLPEILFGEYNP 771
I ++LW+GYPGE GG + +++FG+YNP
Sbjct: 772 IRAVLWVGYPGEAGGDAIAQVIFGDYNP 689
Score = 49.6 bits (102), Expect(5) = 9e-031
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1 / -3
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTG 648
+ MTDMNMR + + G+PGR+YRFYTG
Sbjct: 556 VAMTDMNMRPNSTSGFPGRSYRFYTG 479
Score = 33.1 bits (66), Expect(5) = 9e-031
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1 / -3
Query: 485 SCEALVFSVHVAVSNHGSMDGSHAVLLF 402
+C L + + V NHG GSH VL+F
Sbjct: 337 NCHDLKIRIVIGVKNHGLRSGSHVVLVF 254
Score = 27.6 bits (54), Expect(5) = 9e-031
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 767 GKLPITWYPESF 732
G+LP TWYP+ F
Sbjct: 601 GRLPETWYPQEF 566
>gb|CW793948.1|CW793948 WiscDsLox353H03 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 805
Score = 54.7 bits (113), Expect(5) = 1e-030
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1 / +2
Query: 857 RIASILWLGYPGEVGGQVLPEILFGEYNPG 768
+I SI+W GYPGE GG + EI+FG++NPG
Sbjct: 77 KIGSIIWAGYPGEAGGIAISEIIFGDHNPG 166
Score = 50.1 bits (103), Expect(5) = 1e-030
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1 / +3
Query: 770 GGKLPITWYPESFTAIPMTDMNMRA 696
GG+LP+TWYP+SF I MTDM MR+
Sbjct: 261 GGRLPVTWYPQSFVNIQMTDMRMRS 335
Score = 38.2 bits (77), Expect(5) = 1e-030
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -1 / +3
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVL 225
KQLVG + + + G + +E + C+H+S AN G VL G + L
Sbjct: 660 KQLVGXKSIVLSNGEKAXMEFEIGLCEHLSRANEFGVMVLEXGKYFL 800
Score = 35.4 bits (71), Expect(5) = 1e-030
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 707 NMRADPSRGYPGRTYRFYTGDVV 639
+MR + GYPGRTY+FY G V
Sbjct: 318 DMRMRSATGYPGRTYKFYKGPKV 386
Score = 34.1 bits (68), Expect(5) = 1e-030
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 482 CEALVFSVHVAVSNHGSMDGSHAVLLFAR 396
C+ V V V N G M G H VL+FAR
Sbjct: 537 CDVAKTKVTVEVENQGEMAGKHPVLMFAR 623
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3
Length = 82188
Score = 61.6 bits (128), Expect(4) = 4e-030
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -1 / -2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKL 759
DP+IA ILW+GYPGE GG + +I+FG YNP +L
Sbjct: 30146 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSKRL 30042
Score = 59.7 bits (124), Expect(4) = 4e-030
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / -1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 29937 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 29770
Score = 58.3 bits (121), Expect(4) = 4e-030
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1 / -1
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
++ G P K LVGFE++ + V V+ CK +S + GKR + LG H+L VGD +
Sbjct: 29598 AIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLK 29419
Query: 206 FELSIEL* 183
LSI +*
Sbjct: 29418 HSLSIRI* 29395
Score = 34.1 bits (68), Expect(4) = 4e-030
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 770 GGKLPITWYPESF 732
GGKLP+TWYP+S+
Sbjct: 29985 GGKLPMTWYPQSY 29947
>emb|BX829437.1|CNS0A1IM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB13ZH06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1080
Score = 80.8 bits (170), Expect(3) = 2e-029
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTA 726
DPR+A+I+W GYPG+ G + I+FG NPGGKLP+TWYP+ + A
Sbjct: 333 DPRVAAIIWAGYPGQAGRAAIANIIFGAANPGGKLPMTWYPQDYVA 470
Score = 58.8 bits (122), Expect(3) = 2e-029
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -1 / +2
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIE 189
KQL+ FE+VH AG+ +V++ VD KH+ + GKR + +G H L +GD + + ++
Sbjct: 836 KQLIAFEKVHVMAGAKQTVQVDVDARKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQ 1012
Score = 34.5 bits (69), Expect(3) = 2e-029
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 689 SRGYPGRTYRFYTGDVV 639
S YPGRTYRFY G VV
Sbjct: 504 SGNYPGRTYRFYKGPVV 554
>gb|BX835281.1|BX835281 BX835281 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB82ZD03 3PRIM, mRNA sequence
Length = 864
Score = 48.3 bits (99), Expect(5) = 2e-028
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = -1 / -3
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGD 213
P KQLV FERVH A V++ + CK++S + G + +G H + +GD
Sbjct: 268 PKKQLVAFERVHVAFLEKKRVQVNIHVCKYLSVVDRAGICFIPIGDHWIHIGD 110
Score = 46.0 bits (94), Expect(5) = 2e-028
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M MR S+ PGRTYRFY G VV
Sbjct: 604 TNLPMTEMAMRPVHSKRIPGRTYRFYDGPVV 512
Score = 44.1 bits (90), Expect(5) = 2e-028
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1 / -3
Query: 803 LPEILFGEYNPGGKLPITWYPESF 732
+ +IL G NPGGKLP+TWYP+ +
Sbjct: 679 IADILCGSANPGGKLPMTWYPQDY 608
Score = 36.8 bits (74), Expect(5) = 2e-028
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLL 405
A C+ L VHV V+N GS DG+H +L+
Sbjct: 382 ARCDRLSLGVHVEVTNVGSRDGTHTMLV 299
Score = 29.9 bits (59), Expect(5) = 2e-028
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 857 RIASILWLGYPGEVGG 810
+I +I+W GYPG+ GG
Sbjct: 734 KIPAIVWAGYPGQEGG 687
>gb|CK119681.1|CK119681 211d20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D20211
5-PRIME, mRNA sequence
Length = 533
Score = 88.1 bits (186), Expect(2) = 3e-028
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +3
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 84 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 215
Score = 59.7 bits (124), Expect(2) = 3e-028
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / +3
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVVXXXXXXXXXXXXXXXXSLAPKKITVSL 558
+PMT MNMR D + GYPGRTYRFYTG+ V AP +++ L
Sbjct: 225 VPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGL 392
>gb|CK120608.1|CK120608 206p04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P04206
5-PRIME, mRNA sequence
Length = 775
Score = 88.1 bits (186), Expect(2) = 1e-027
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
DP+IA ILW+GYPGE GG + +I+FG YNP GKLP+TWYP+S+
Sbjct: 529 DPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 660
Score = 57.9 bits (120), Expect(2) = 1e-027
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -1 / +1
Query: 725 IPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
+PMT MNMR D + GYPGRTYRFYTG+ V
Sbjct: 670 VPMTIMNMRPDKASGYPGRTYRFYTGETV 756
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 76.2 bits (160), Expect(4) = 2e-027
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1 / +1
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESF 732
D +I +I+W GYPG+ GG + +ILFG NPGGKLP+TWYP+ +
Sbjct: 566956 DRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDY 567087
Score = 63.4 bits (132), Expect(4) = 2e-027
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -1 / +1
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSI 192
P KQLV FERVH A G V++ + CK++S + G R + +G H + +GDE +S+
Sbjct: 567427 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 567606
Query: 191 E 189
+
Sbjct: 567607 Q 567609
Score = 47.3 bits (97), Expect(4) = 2e-027
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +1
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 567091 TNLPMTEMSMRPVHSKRIPGRTYRFYDGPVV 567183
Score = 40.0 bits (81), Expect(4) = 2e-027
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +1
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 567313 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 567402
>gb|CW839589.1|CW839589 GT8592.Ds3.04.19.2002.jw24.541 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT8592, DNA sequence
Length = 541
Score = 50.1 bits (103), Expect(4) = 2e-027
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1 / +2
Query: 812 GQVLPEILFGEYNPGGKLPITWYPESF 732
G + +ILFG NPGGKLP+TWYP+ +
Sbjct: 5 GTAIADILFGSANPGGKLPMTWYPQDY 85
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / +2
Query: 731 TAIPMTDMNMRADPSRGYPGRTYRFYTGDVV 639
T +PMT+M+MR S+ PGRTYRFY G VV
Sbjct: 89 TNLPMTEMSMRPLHSKRIPGRTYRFYDGPVV 181
Score = 45.5 bits (93), Expect(4) = 2e-027
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1 / +2
Query: 371 PIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEG 258
P KQLV FERVH A G V++ + CK++S + G
Sbjct: 425 PKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAG 538
Score = 40.0 bits (81), Expect(4) = 2e-027
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 488 ASCEALVFSVHVAVSNHGSMDGSHAVLLFA 399
A C+ L VHV V+N GS DG+H +L+F+
Sbjct: 311 ARCDRLSLGVHVEVTNVGSRDGTHTMLVFS 400
>dbj|AB023034.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K7J8
Length = 56963
Score = 64.3 bits (134), Expect(5) = 2e-026
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = -1 / -1
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIE 189
KQL+ FE+VH AG+ +V++ VD CKH+ + GKR + +G H L +GD + + ++
Sbjct: 4475 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQ 4299
Score = 56.1 bits (116), Expect(5) = 2e-026
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = -1 / -2
Query: 863 DPRIASILWLGYPGEVGGQVLPEILFGEYNPG 768
DPR+A+I+W GYPG+ GG + I+FG NPG
Sbjct: 5068 DPRVAAIIWAGYPGQAGGAAIANIIFGAANPG 4973
Score = 34.5 bits (69), Expect(5) = 2e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 689 SRGYPGRTYRFYTGDVV 639
S YPGRTYRFY G VV
Sbjct: 4805 SGNYPGRTYRFYKGPVV 4755
Score = 34.1 bits (68), Expect(5) = 2e-026
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 770 GGKLPITWYPESFTA 726
GGKLP+TWYP+ + A
Sbjct: 4883 GGKLPMTWYPQDYVA 4839
Score = 33.1 bits (66), Expect(5) = 2e-026
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 461 VHVAVSNHGSMDGSHAVLLFA 399
+HV VSN G DG+H V +FA
Sbjct: 4577 LHVEVSNTGEFDGTHTVFVFA 4515
>gb|BP589175.1|BP589175 BP589175 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-48-O04 3',
mRNA sequence
Length = 406
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -2
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 378 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 199
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 198 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 70
>gb|BP604928.1|BP604928 BP604928 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-64-O05 3',
mRNA sequence
Length = 345
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -2
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 341 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 162
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 161 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 33
>gb|BP611267.1|BP611267 BP611267 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-85-C16 3',
mRNA sequence
Length = 464
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -1
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 383 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 204
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 203 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 75
>gb|BP619691.1|BP619691 BP619691 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-34-D10 3',
mRNA sequence
Length = 448
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -3
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 383 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 204
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 203 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 75
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / +3
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 3092994 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 3093173
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 3093174 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 3093302
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 120 bits (256), Expect = 7e-026
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = -1 / -2
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 3336644 VNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 3336465
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 3336464 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 3336336
>gb|BX836799.1|BX836799 BX836799 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB33ZE01 3PRIM, mRNA sequence
Length = 859
Score = 78.5 bits (165), Expect(5) = 1e-025
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1 / -3
Query: 857 RIASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRA 696
+I + +W G PGE G EI+FG++NPGG+LP+ WYP+S I MTDM MR+
Sbjct: 698 KIGNRIWAGDPGESEGMARAEIIFGDHNPGGRLPVKWYPQSCVNIQMTDMRMRS 537
Score = 36.3 bits (73), Expect(5) = 1e-025
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 365 KQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEG 258
KQLVGF+ + + G + +E + C+H+S AN G
Sbjct: 210 KQLVGFKSIVLSNGEKTEMEFEIGLCEHLSRANEFG 103
Score = 28.6 bits (56), Expect(5) = 1e-025
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 707 NMRADPSRGYPGRTYRFYTGDVV 639
+MR + GYPGR +FY G V
Sbjct: 554 DMRMRSATGYPGRKKKFYKGPKV 486
Score = 27.2 bits (53), Expect(5) = 1e-025
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 443 NHGSMDGSHAVLLFAR 396
N G M G H VL+FAR
Sbjct: 294 NQGEMAGKHPVLMFAR 247
Score = 24.4 bits (47), Expect(5) = 1e-025
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1 / -2
Query: 239 GAHVLTVGDEEFELSIEL* 183
G +VLTVGD E L + +*
Sbjct: 84 GKYVLTVGDSELPLIVNV* 28
>gb|BP595027.1|BP595027 BP595027 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-28-C11 3',
mRNA sequence
Length = 439
Score = 118 bits (253), Expect = 2e-025
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = -1 / -3
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F++ V VSN G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 383 VNSCESLRFNLRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 204
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 203 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 75
>gb|BP602652.1|BP602652 BP602652 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-55-I02 3',
mRNA sequence
Length = 419
Score = 118 bits (253), Expect = 2e-025
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = -1 / -1
Query: 491 IASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAGSASS 312
+ SCE+L F+V V V+N G +DGSH V+LF++ + G P KQL+G++RVH +
Sbjct: 383 VNSCESLRFNVRVHVTNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMME 204
Query: 311 VEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL* 183
+DPCK +S AN GKRV+ LG+HVL +GD + LS+E *
Sbjct: 203 TVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVEF* 75
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,876,783,407
Number of Sequences: 1013581
Number of extensions: 28032368
Number of successful extensions: 171864
Number of sequences better than 1.0e-020: 67
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 56876763174
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)