TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5110719.2.1
(581 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_201656.1| Arabidopsis thaliana transcription factor ... 131 8e-039
ref|NM_126168.2| Arabidopsis thaliana transcription factor ... 131 8e-039
gb|AY084725.1| Arabidopsis thaliana clone 115924 mRNA, comp... 131 8e-039
gb|AF370550.1|AF370550 Arabidopsis thaliana transfactor-lik... 131 8e-039
gb|BT000013.1| Arabidopsis thaliana transfactor-like protei... 131 9e-039
gb|DR751170.1|DR751170 20-L021131-065-005-D03-SeLB MPIZ-ADI... 131 9e-039
gb|DR751331.1|DR751331 12-L021131-065-005-D02-SeLB MPIZ-ADI... 131 9e-039
gb|DR751330.1|DR751330 12-L021127-065-005-D02-SeLA MPIZ-ADI... 131 9e-039
gb|DR751172.1|DR751172 20-L021127-065-005-D03-SeLA MPIZ-ADI... 131 2e-037
emb|BX820061.1|CNS0A9EL Arabidopsis thaliana Full-length cD... 90 4e-037
gb|DR751478.1|DR751478 04-L021127-065-005-D01-SeLA MPIZ-ADI... 131 3e-036
gb|DR751479.1|DR751479 04-L021131-065-005-D01-SeLB MPIZ-ADI... 122 7e-036
emb|BX820374.1|CNS0A9NR Arabidopsis thaliana Full-length cD... 90 1e-035
gb|AV821757.1|AV821757 AV821757 RAFL4 Arabidopsis thaliana ... 131 5e-032
emb|BX820595.1|CNS0A9I8 Arabidopsis thaliana Full-length cD... 118 7e-032
gb|AI995135.1|AI995135 701502242 A. thaliana, Ohio State cl... 122 2e-026
gb|DR750662.1|DR750662 45-L021127-065-005-E06-SeLA MPIZ-ADI... 120 6e-025
emb|BX821637.1|CNS0A9BG Arabidopsis thaliana Full-length cD... 73 5e-023
gb|T76484.1|T76484 11262 Lambda-PRL2 Arabidopsis thaliana c... 98 7e-021
>ref|NM_201656.1| Arabidopsis thaliana transcription factor AT2G01060 transcript
variant AT2G01060.2 mRNA, complete cds
Length = 1415
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 817 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 638
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 637 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 521
Score = 122 bits (260), Expect(3) = 8e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 519 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 698
Query: 183 K 185
K
Sbjct: 699 K 701
Score = 44.6 bits (91), Expect(3) = 8e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 753 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 875
Score = 40.9 bits (83), Expect(3) = 8e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +3
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 948 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 1040
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 880 GDSDVGAGVAGSESPVTG 827
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 1006 LSSGDPMLHPESGVKGS 956
>ref|NM_126168.2| Arabidopsis thaliana transcription factor AT2G01060 transcript
variant AT2G01060.1 mRNA, complete cds
Length = 1261
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 663 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 484
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 483 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 367
Score = 122 bits (260), Expect(3) = 8e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 365 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 544
Query: 183 K 185
K
Sbjct: 545 K 547
Score = 44.6 bits (91), Expect(3) = 8e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 599 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 721
Score = 40.9 bits (83), Expect(3) = 8e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 794 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 886
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 726 GDSDVGAGVAGSESPVTG 673
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 852 LSSGDPMLHPESGVKGS 802
>gb|AY084725.1| Arabidopsis thaliana clone 115924 mRNA, complete sequence
Length = 1203
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -1
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 663 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 484
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 483 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 367
Score = 122 bits (260), Expect(3) = 8e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 365 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 544
Query: 183 K 185
K
Sbjct: 545 K 547
Score = 44.6 bits (91), Expect(3) = 8e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 599 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 721
Score = 40.9 bits (83), Expect(3) = 8e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 794 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 886
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 726 GDSDVGAGVAGSESPVTG 673
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 852 LSSGDPMLHPESGVKGS 802
>gb|AF370550.1|AF370550 Arabidopsis thaliana transfactor-like protein (At2g01060; F23H14.3)
mRNA, complete cds
Length = 1182
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -1
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 612 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 433
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 432 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 316
Score = 122 bits (260), Expect(3) = 8e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 314 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 493
Query: 183 K 185
K
Sbjct: 494 K 496
Score = 44.6 bits (91), Expect(3) = 8e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 548 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 670
Score = 40.9 bits (83), Expect(3) = 8e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 743 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 835
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 675 GDSDVGAGVAGSESPVTG 622
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 801 LSSGDPMLHPESGVKGS 751
>gb|BT000013.1| Arabidopsis thaliana transfactor-like protein (At2g01060) mRNA,
complete cds
Length = 975
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 461 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 282
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 281 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 165
Score = 122 bits (260), Expect(3) = 9e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 163 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 342
Query: 183 K 185
K
Sbjct: 343 K 345
Score = 44.6 bits (91), Expect(3) = 9e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 397 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 519
Score = 40.9 bits (83), Expect(3) = 9e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 592 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 684
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 524 GDSDVGAGVAGSESPVTG 471
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 650 LSSGDPMLHPESGVKGS 600
>gb|DR751170.1|DR751170 20-L021131-065-005-D03-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D03, mRNA sequence
Length = 867
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 492 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 671
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 672 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 788
Score = 122 bits (260), Expect(3) = 9e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / -3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 790 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 611
Query: 183 K 185
K
Sbjct: 610 K 608
Score = 44.6 bits (91), Expect(3) = 9e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / -3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 556 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 434
Score = 40.9 bits (83), Expect(3) = 9e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / -3
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 361 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 269
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 429 GDSDVGAGVAGSESPVTG 482
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / +3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 303 LSSGDPMLHPESGVKGS 353
>gb|DR751331.1|DR751331 12-L021131-065-005-D02-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D02, mRNA sequence
Length = 803
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 432 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 611
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 612 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 728
Score = 122 bits (260), Expect(3) = 9e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / -2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 730 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 551
Query: 183 K 185
K
Sbjct: 550 K 548
Score = 44.6 bits (91), Expect(3) = 9e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / -2
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 496 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 374
Score = 40.9 bits (83), Expect(3) = 9e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / -2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 301 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 209
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 369 GDSDVGAGVAGSESPVTG 422
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / +3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 243 LSSGDPMLHPESGVKGS 293
>gb|DR751330.1|DR751330 12-L021127-065-005-D02-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D02, mRNA sequence
Length = 796
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 531 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 352
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 351 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 235
Score = 122 bits (260), Expect(3) = 9e-039
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 233 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 412
Query: 183 K 185
K
Sbjct: 413 K 415
Score = 44.6 bits (91), Expect(3) = 9e-039
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 467 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 589
Score = 40.9 bits (83), Expect(3) = 9e-039
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 662 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 754
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 594 GDSDVGAGVAGSESPVTG 541
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 720 LSSGDPMLHPESGVKGS 670
>gb|DR751172.1|DR751172 20-L021127-065-005-D03-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D03, mRNA sequence
Length = 742
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 533 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 354
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 353 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 237
Score = 122 bits (260), Expect(3) = 2e-037
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 235 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 414
Query: 183 K 185
K
Sbjct: 415 K 417
Score = 44.6 bits (91), Expect(3) = 2e-037
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 469 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 591
Score = 35.9 bits (72), Expect(3) = 2e-037
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 480 SRNEPLTPDSNCQNGSPVASPNHER 554
S EPLTPDS C GSP S ER
Sbjct: 664 SYREPLTPDSGCNIGSPDESTGEER 738
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 596 GDSDVGAGVAGSESPVTG 543
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 722 LSSGDPMLHPESGVKGS 672
>emb|BX820061.1|CNS0A9EL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZC03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1446
Score = 90.4 bits (191), Expect(4) = 4e-037
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSS 137
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSS
Sbjct: 497 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSS 631
Score = 67.5 bits (141), Expect(4) = 7e-029
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = -2 / -3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNP 137
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P
Sbjct: 892 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIP 728
Score = 66.6 bits (139), Expect(4) = 7e-029
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -2 / -1
Query: 136 EDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
++PS+P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 630 DEPSNPESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 499
Score = 44.6 bits (91), Expect(4) = 4e-037
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 828 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 950
Score = 42.3 bits (86), Expect(4) = 4e-037
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 139 DCRYLKPSNCRWRSKSGCTNS*KYKGSC 222
+CR LKPS+CRW+ ++ T++*K K SC
Sbjct: 730 ECR*LKPSSCRWKFRNDYTSN*KCKDSC 813
Score = 40.9 bits (83), Expect(4) = 4e-037
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +3
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 1023 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 1115
Score = 26.7 bits (52), Expect(4) = 7e-029
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 955 GDSDVGAGVAGSESPVTG 902
Score = 23.5 bits (45), Expect(4) = 7e-029
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 1081 LSSGDPMLHPESGVKGS 1031
>gb|DR751478.1|DR751478 04-L021127-065-005-D01-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D01, mRNA sequence
Length = 730
Score = 131 bits (280), Expect(3) = 4e-033
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -1
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 532 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 353
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 352 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 236
Score = 122 bits (260), Expect(3) = 3e-036
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 234 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 413
Query: 183 K 185
K
Sbjct: 414 K 416
Score = 44.6 bits (91), Expect(3) = 3e-036
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEEQQRL+GV E A + + P SE
Sbjct: 468 AQGKYLKKIIEEQQRLSGVLGEPSAPVTGDSDPATPAPTSE 590
Score = 31.8 bits (63), Expect(3) = 3e-036
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 480 SRNEPLTPDSNCQNGSP 530
S EPLTPDS C GSP
Sbjct: 663 SYREPLTPDSGCNIGSP 713
Score = 26.7 bits (52), Expect(3) = 4e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 595 GDSDVGAGVAGSESPVTG 542
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 721 LSSGDPMLHPESGVKGS 671
>gb|DR751479.1|DR751479 04-L021131-065-005-D01-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-D01, mRNA sequence
Length = 801
Score = 122 bits (260), Expect(3) = 4e-029
Identities = 56/98 (57%), Positives = 67/98 (68%)
Frame = -2 / +3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ R CSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 441 SPSTPLSR*CSSIIFFKYFPCASIRSCSCLCTSSCS*NRF*TSICNLRASVICIPDEPSN 620
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYI 8
P S SP S LS+ FPS + SG YFAS YFCK*L T YI
Sbjct: 621 PESISPDSFLSIFFPSEDESGRYFASRYFCK*LLT*YI 734
Score = 117 bits (250), Expect(3) = 7e-036
Identities = 46/61 (75%), Positives = 57/61 (93%)
Frame = +3 / -3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
L+IYHVKSHLQKYRLAKY+PD+S++G K D K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 739 LSIYHVKSHLQKYRLAKYLPDSSSEGKKIDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 560
Query: 183 K 185
K
Sbjct: 559 K 557
Score = 42.3 bits (86), Expect(3) = 7e-036
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +3 / -3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPAGGASVTVSSDQFPDSE 359
AQGKYL+KIIEE QRL+GV E A + + P SE
Sbjct: 505 AQGKYLKKIIEEHQRLSGVLGEPSAPVTGDSDHATPAPTSE 383
Score = 40.0 bits (81), Expect(3) = 7e-036
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 489 EPLTPDSNCQNGSPVASPNHERAAKRQR 572
EPLTPDS C GSP S ER +K+ R
Sbjct: 301 EPLTPDSGCNIGSPDESTGEERLSKKPR 218
Score = 23.5 bits (45), Expect(3) = 4e-029
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / +3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 252 LSSGDPMLHPESGVKGS 302
Score = 22.1 bits (42), Expect(3) = 4e-029
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 400 GDSDAGAGV 374
GDSD GAGV
Sbjct: 378 GDSDVGAGV 404
>emb|BX820374.1|CNS0A9NR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH27ZD02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1355
Score = 90.4 bits (191), Expect(4) = 1e-035
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSS 137
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSS
Sbjct: 539 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSS 673
Score = 67.5 bits (141), Expect(4) = 8e-028
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNP 137
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P
Sbjct: 934 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIP 770
Score = 66.6 bits (139), Expect(4) = 8e-028
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -2 / -3
Query: 136 EDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
++PS+P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 672 DEPSNPESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 541
Score = 44.1 bits (90), Expect(4) = 1e-035
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 237 AQGKYLQKIIEEQQRLTGVKSETPA 311
AQGKYL+KIIEEQQRL+GV E A
Sbjct: 870 AQGKYLKKIIEEQQRLSGVLGEPSA 944
Score = 42.3 bits (86), Expect(4) = 1e-035
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 139 DCRYLKPSNCRWRSKSGCTNS*KYKGSC 222
+CR LKPS+CRW+ ++ T++*K K SC
Sbjct: 772 ECR*LKPSSCRWKFRNDYTSN*KCKDSC 855
Score = 40.9 bits (83), Expect(4) = 1e-035
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +2
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 1064 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 1156
Score = 23.5 bits (45), Expect(4) = 8e-028
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 1122 LSSGDPMLHPESGVKGS 1072
Score = 23.1 bits (44), Expect(4) = 8e-028
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 400 GDSDAGAGVE 371
GDSD GAGV+
Sbjct: 996 GDSDVGAGVQ 967
>gb|AV821757.1|AV821757 AV821757 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-16-A07 5',
mRNA sequence
Length = 662
Score = 131 bits (280), Expect = 2e-029
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = -2 / -3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 612 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 433
Query: 121 PASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P S SP S LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 432 PESISPDSFLSVFFPSEDESGRYFASRYFCK*LLT*YIV 316
Score = 122 bits (260), Expect(2) = 5e-032
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +2
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 314 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 493
Query: 183 K 185
K
Sbjct: 494 K 496
Score = 43.2 bits (88), Expect(2) = 5e-032
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSE 302
AQGKYL+KIIEEQQRL+GV E
Sbjct: 548 AQGKYLKKIIEEQQRLSGVLGE 613
>emb|BX820595.1|CNS0A9I8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH50ZF02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1358
Score = 118 bits (252), Expect(3) = 7e-032
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYH KSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 520 LTIYHFKSHLQKYRLAKYLPDSSSEGKKTDKKEFGDMLSGLDGSSGMQITEALKLQMEVQ 699
Query: 183 K 185
K
Sbjct: 700 K 702
Score = 116 bits (247), Expect(2) = 3e-025
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -2 / -1
Query: 274 CSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSSPASKSPGSL 95
CSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+P S SP S
Sbjct: 791 CSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSNPESISPNSF 612
Query: 94 LSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
LSV FPS + SG YFAS YFCK*L YIV
Sbjct: 611 LSVFFPSEDESGRYFASRYFCK*LLK*YIV 522
Score = 40.9 bits (83), Expect(3) = 7e-032
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +1
Query: 480 SRNEPLTPDSNCQNGSPVASPNHERAAKRQR 572
S EPLTPDS C GSP S ER +K+ R
Sbjct: 949 SYREPLTPDSGCNIGSPDESTGEERLSKKPR 1041
Score = 28.1 bits (55), Expect(3) = 7e-032
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 237 AQGKYLQKIIEE 272
AQGKYL+KIIEE
Sbjct: 754 AQGKYLKKIIEE 789
Score = 23.5 bits (45), Expect(2) = 3e-025
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 538 LATGEPFWQLESGVSGS 488
L++G+P ESGV GS
Sbjct: 1007 LSSGDPMLHPESGVKGS 957
>gb|AI995135.1|AI995135 701502242 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701502242, mRNA sequence
Length = 578
Score = 122 bits (260), Expect(2) = 2e-026
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHVKSHLQKYRLAKY+PD+S++G KTD K+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 184 LTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQ 363
Query: 183 K 185
K
Sbjct: 364 K 366
Score = 112 bits (239), Expect = 1e-023
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = -2 / -1
Query: 274 CSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSSPASKSPGSL 95
CSS+IF +Y+P ASI +RF TSIC+LRAS IC P++PS+P S SP S
Sbjct: 455 CSSIIFIKYYPCASIGSCSCLCTSSCSCNRF*TSICNLRASVICMPDEPSNPESISPDSF 276
Query: 94 LSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
LSV FPS + SG YFAS YFCK*L T YIV
Sbjct: 275 LSVFFPSEDESGRYFASRYFCK*LLT*YIV 186
Score = 23.5 bits (45), Expect(2) = 2e-026
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 237 AQGKYLQKIIEE 272
AQG YL KIIEE
Sbjct: 418 AQG*YLMKIIEE 453
>gb|DR750662.1|DR750662 45-L021127-065-005-E06-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-E06, mRNA sequence
Length = 329
Score = 120 bits (257), Expect = 6e-025
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3 / +3
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLLAGLEGSSGLQISEALKLQMEVQ 182
LTIYHV SHLQKYRLAKY+PD+S++G KTDNK+ GD+L+GL+GSSG+QI+EALKLQMEVQ
Sbjct: 141 LTIYHV*SHLQKYRLAKYLPDSSSEGKKTDNKESGDMLSGLDGSSGMQITEALKLQMEVQ 320
Query: 183 K 185
K
Sbjct: 321 K 323
>emb|BX821637.1|CNS0A9BG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL5ZF08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1010
Score = 72.5 bits (152), Expect(3) = 5e-023
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = -2 / -3
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS I P++PS+
Sbjct: 639 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSRSCNRF*TSICNLRASVI*IPDEPSN 460
Query: 121 P 119
P
Sbjct: 459 P 457
Score = 55.1 bits (114), Expect(4) = 4e-022
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3 / +1
Query: 3 LTIYHVKSHLQKYRLAKYIPDASTDGNKTDNKDPGDLL 116
LTIY VKS LQKY+LAKY+PD+S++G D ++ +L
Sbjct: 340 LTIYDVKSDLQKYQLAKYLPDSSSEGKGADKRESAHML 453
Score = 47.8 bits (98), Expect(3) = 5e-023
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = -2 / -1
Query: 139 PEDPSSPASKSPGSLLSVLFPSVEASGIYFASLYFCK*LFTWYIV 5
P + S SLLS FPS + SG YFAS YFCK L T YIV
Sbjct: 476 PTSRPTQTSICADSLLSAPFPSEDESGRYFAS*YFCKSLLTSYIV 342
Score = 45.5 bits (93), Expect(4) = 4e-022
Identities = 18/23 (78%), Positives = 23/23 (100%)
Frame = +3 / +2
Query: 117 AGLEGSSGLQISEALKLQMEVQK 185
+GL+GSSG+Q++EALKLQMEVQK
Sbjct: 455 SGLDGSSGIQMTEALKLQMEVQK 523
Score = 43.2 bits (88), Expect(4) = 4e-022
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3 / +2
Query: 237 AQGKYLQKIIEEQQRLTGVKSE 302
AQGKYL+KIIEEQQRL+GV E
Sbjct: 575 AQGKYLKKIIEEQQRLSGVLGE 640
Score = 26.7 bits (52), Expect(3) = 5e-023
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 400 GDSDAGAGVEGSVRSESG 347
GDSD GAGV GS +G
Sbjct: 702 GDSDVGAGVAGSQSPVTG 649
Score = 25.8 bits (50), Expect(4) = 4e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 480 SRNEPLTPDSNCQN 521
S EPLTPDS C +
Sbjct: 771 SYREPLTPDSGCNH 812
>gb|T76484.1|T76484 11262 Lambda-PRL2 Arabidopsis thaliana cDNA clone 153I5T7, mRNA
sequence
Length = 426
Score = 97.7 bits (207), Expect(2) = 7e-021
Identities = 43/76 (56%), Positives = 52/76 (68%)
Frame = -2 / -2
Query: 301 SDFTPVKRCCSSMIFWRYFP*ASIRXXXXXXXXXXXXSRFWTSICSLRASDICNPEDPSS 122
S TP+ RCCSS+IF++YFP ASIR +RF TSIC+LRAS IC P++PS+
Sbjct: 236 SPSTPLSRCCSSIIFFKYFPCASIRSCSCLCTSSCSCNRF*TSICNLRASVICIPDEPSN 57
Query: 121 PASKSPGSLLSVLFPS 74
P S SP S LSV FPS
Sbjct: 56 PESISPDSFLSVFFPS 9
Score = 24.4 bits (47), Expect(2) = 7e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 400 GDSDAGAGVEG 368
GDSD GAGV G
Sbjct: 299 GDSDVGAGVAG 267
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,179,254,543
Number of Sequences: 1013581
Number of extensions: 15873782
Number of successful extensions: 217624
Number of sequences better than 1.0e-020: 23
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 34118200230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)