TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3866402.2.1
(406 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana ... 170 2e-041
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 170 2e-041
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 170 2e-041
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 170 2e-041
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 170 2e-041
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 170 2e-041
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 170 2e-041
gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower... 145 7e-034
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 145 7e-034
gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower... 144 9e-034
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 144 9e-034
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 144 9e-034
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 144 1e-033
emb|AX412747.1| Sequence 511 from Patent WO0222675 144 1e-033
emb|AX508002.1| Sequence 2697 from Patent WO0216655 144 1e-033
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 144 1e-033
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 143 2e-033
gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots ... 144 3e-033
gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-... 138 8e-032
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 138 8e-032
gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana ... 138 1e-031
gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana... 138 1e-031
gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana ... 138 1e-031
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 138 1e-031
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 138 1e-031
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 138 1e-031
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 138 1e-031
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 135 7e-031
emb|AX441264.1| Sequence 18 from Patent EP1209228 135 7e-031
dbj|BD181338.1| A stress-responsive promoter 135 7e-031
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 135 7e-031
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 135 7e-031
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 135 7e-031
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 134 1e-030
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 132 5e-030
emb|AX651854.1| Sequence 720 from Patent WO03000898 129 5e-029
gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-... 125 6e-028
gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveg... 125 6e-028
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 125 6e-028
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 125 6e-028
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 125 6e-028
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 125 6e-028
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 125 6e-028
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 125 6e-028
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 125 6e-028
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 125 8e-028
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 123 2e-027
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 122 5e-027
gb|AV522143.1|AV522143 AV522143 Arabidopsis thaliana aboveg... 120 2e-026
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 116 3e-025
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 116 3e-025
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 114 1e-024
gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana... 114 2e-024
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 114 2e-024
gb|BH753021.1|BH753021 SALK_019658.55.75.x Arabidopsis thal... 111 8e-024
emb|AL759226.1| Arabidopsis thaliana T-DNA flanking sequenc... 111 8e-024
gb|AV548414.1|AV548414 AV548414 Arabidopsis thaliana roots ... 111 8e-024
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 111 8e-024
gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana... 104 9e-024
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 109 5e-023
gb|B27162.1|B27162 T2A17TR TAMU Arabidopsis thaliana genomi... 101 2e-021
gb|AU238941.1|AU238941 AU238941 RAFL19 Arabidopsis thaliana... 103 3e-021
gb|CL499023.1|CL499023 SAIL_662_E12.v2 SAIL Collection Arab... 102 6e-021
>gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana genomic clone LERAR55, DNA
sequence
Length = 668
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 33 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 212
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 213 LFNQAFSRGLQIQRILAGGKKQK* 284
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -2
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 283 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 104
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 103 DPHIPTVFINGLATCDI*RRAHPV 32
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 14108 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 14287
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 14288 LFNQAFSRGLQIQRILAGGKKQK* 14359
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -3
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 14358 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 14179
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 14178 DPHIPTVFINGLATCDI*RRAHPV 14107
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 96310 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 96489
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 96490 LFNQAFSRGLQIQRILAGGKKQK* 96561
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -2
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 96560 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 96381
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 96380 DPHIPTVFINGLATCDI*RRAHPV 96309
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 5521 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 5700
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 5701 LFNQAFSRGLQIQRILAGGKKQK* 5772
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -2
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 5771 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 5592
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 5591 DPHIPTVFINGLATCDI*RRAHPV 5520
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 5674 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 5853
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 5854 LFNQAFSRGLQIQRILAGGKKQK* 5925
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -3
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 5924 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 5745
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 5744 DPHIPTVFINGLATCDI*RRAHPV 5673
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 5521 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 5700
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 5701 LFNQAFSRGLQIQRILAGGKKQK* 5772
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -2
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 5771 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 5592
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 5591 DPHIPTVFINGLATCDI*RRAHPV 5520
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 170 bits (366), Expect = 2e-041
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+LQISQ ++P++K G+WGSVKAL+RGYEY+MG+VIF+PV VLAWFPFVSEFQ RL
Sbjct: 5712965 TGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRL 5713144
Query: 224 LFNQAFSRGLQISRILAGGKKQR* 153
LFNQAFSRGLQI RILAGGKKQ+*
Sbjct: 5713145 LFNQAFSRGLQIQRILAGGKKQK* 5713216
Score = 134 bits (288), Expect = 1e-030
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = -3 / +2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ +I+QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+LFNQ
Sbjct: 13606886 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 13607065
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G +K R
Sbjct: 13607066 AFSRGLQISRILGGQRKDR 13607122
Score = 130 bits (278), Expect = 2e-029
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +1 / -1
Query: 154 YLCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFT 333
Y CFLPPA+IR I RPRL A*LK +L WNSET GNHAST TG K+T P+ YSYPL +A T
Sbjct: 5713215 YFCFLPPARIRWIWRPRLKA*LKRSLVWNSETKGNHASTVTGMKITTPMMYSYPLAKALT 5713036
Query: 334 DPQSPNALMTGLLA*DICRMAHPV 405
DP P + GL DI R AHPV
Sbjct: 5713035 DPHIPTVFINGLATCDI*RRAHPV 5712964
Score = 116 bits (248), Expect = 3e-025
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+L ++ K V++ GLW +V+ R Y+ MG++IF P+A+L+WFPF+S FQ+RL
Sbjct: 15462271 TGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSPIALLSWFPFISTFQSRL 15462092
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG +
Sbjct: 15462091 LFNQAFSRGLEISIILAGNR 15462032
>gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB084c02F 3', mRNA sequence
Length = 455
Score = 145 bits (311), Expect = 7e-034
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 420 TGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 241
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 240 LFNQAFSRGLQISRILGGHRKDR 172
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 145 bits (311), Expect = 7e-034
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5775 TGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 5954
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5955 LFNQAFSRGLQISRILGGHRKDR 6023
>gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101h07F 3', mRNA sequence
Length = 533
Score = 144 bits (310), Expect = 9e-034
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+
Sbjct: 390 TGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRM 211
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 210 LFNQAFSRGLQISRILGGQRKDR 142
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 144 bits (310), Expect = 9e-034
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+
Sbjct: 2001 TGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRM 2180
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 2181 LFNQAFSRGLQISRILGGQRKDR 2249
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 144 bits (310), Expect = 9e-034
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5611 TGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRM 5790
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5791 LFNQAFSRGLQISRILGGQRKDR 5859
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 144 bits (309), Expect = 1e-033
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5593 TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 5772
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5773 LFNQAFSRGLQISRILGGQRKDR 5841
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 144 bits (309), Expect = 1e-033
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5308 TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 5487
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5488 LFNQAFSRGLQISRILGGQRKDR 5556
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 144 bits (309), Expect = 1e-033
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5308 TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 5487
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5488 LFNQAFSRGLQISRILGGQRKDR 5556
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 144 bits (309), Expect = 1e-033
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 5593 TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 5772
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 5773 LFNQAFSRGLQISRILGGQRKDR 5841
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 143 bits (307), Expect = 2e-033
Identities = 59/80 (73%), Positives = 64/80 (80%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWAIL I QA + V K G W SVK L R YEY+MG+VIF P+AVL+WFPFVSEFQ RL
Sbjct: 5536 TGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRL 5715
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGLQIS ILAG K
Sbjct: 5716 LFNQAFSRGLQISMILAGKK 5775
>gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL15c03F 3', mRNA sequence
Length = 544
Score = 144 bits (309), Expect(2) = 3e-033
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 397 TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 218
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 217 LFNQAFSRGLQISRILGGQRKDR 149
Score = 18.0 bits (33), Expect(2) = 3e-033
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2 / -3
Query: 90 CTWVMGVC 67
CT V GVC
Sbjct: 125 CTHVNGVC 102
>gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550178, mRNA sequence
Length = 626
Score = 138 bits (296), Expect = 8e-032
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TG +L I+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+
Sbjct: 444 TGXXMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 265
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G +K R
Sbjct: 264 LFNQAFSRGLQISRILGGQRKDR 196
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 138 bits (296), Expect = 8e-032
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW + I QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+
Sbjct: 1047 TGWGM*LIEQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVASLAWFPFVSEFQTRM 1226
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQ SRIL G +K R
Sbjct: 1227 LFNQAFSRGLQFSRILGGQRKDR 1295
>gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 382
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 68 FSRGLQISRILGGHRKDR 15
>gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 538
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 68 FSRGLQISRILGGHRKDR 15
>gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 751
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -2
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 279 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 100
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 99 FSRGLQISRILGGHRKDR 46
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 3923675 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 3923496
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 3923495 FSRGLQISRILGGHRKDR 3923442
Score = 114 bits (243), Expect = 2e-024
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = -3 / +3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+Q+ KP+I+ G+W V L+ Y+ +MG ++F+P+A +AWFPF+SEFQ R+LFNQAF
Sbjct: 13467054 QIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAF 13467233
Query: 206 SRGLQISRILAGGKKQR 156
SRGL ISRIL+G +K R
Sbjct: 13467234 SRGLHISRILSGQRKHR 13467284
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -1
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 62516 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 62337
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 62336 FSRGLQISRILGGHRKDR 62283
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 138 bits (295), Expect = 1e-031
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWAIL I Q + IKA G+W SVK L R YE +MG+VIF P+AVL+WFP VSEFQARL
Sbjct: 5539 TGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVSEFQARL 5718
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGLQIS ILAG K
Sbjct: 5719 LFNQAFSRGLQISMILAGRK 5778
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 138 bits (295), Expect = 1e-031
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = -3 / -1
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
LQI+QA KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQA
Sbjct: 4110702 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 4110523
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G +K R
Sbjct: 4110522 FSRGLQISRILGGHRKDR 4110469
Score = 114 bits (243), Expect = 2e-024
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = -3 / +3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+Q+ KP+I+ G+W V L+ Y+ +MG ++F+P+A +AWFPF+SEFQ R+LFNQAF
Sbjct: 14550909 QIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAF 14551088
Query: 206 SRGLQISRILAGGKKQR 156
SRGL ISRIL+G +K R
Sbjct: 14551089 SRGLHISRILSGQRKHR 14551139
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / -2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 1648007 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 1647828
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 1647827 SRGLQISRILGGQRKDR 1647777
Score = 132 bits (283), Expect = 5e-030
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+L+I QA + V K G W SVK L R YEY+MG+VIF P+AVL+WFPFVSEFQ RLLFNQ
Sbjct: 1988638 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988817
Query: 212 AFSRGLQISRILAGGK 165
AFSRGLQIS ILAG K
Sbjct: 1988818 AFSRGLQISMILAGKK 1988865
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / +2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 1103 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 1282
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 1283 SRGLQISRILGGQRKDR 1333
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / +2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 1103 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 1282
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 1283 SRGLQISRILGGQRKDR 1333
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / -3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 29655 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 29476
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 29475 SRGLQISRILGGQRKDR 29425
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 80204 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 80025
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 80024 SRGLQISRILGGQRKDR 79974
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 135 bits (289), Expect = 7e-031
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP+I+ G+W SV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAF
Sbjct: 1648130 QIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAF 1647951
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G +K R
Sbjct: 1647950 SRGLQISRILGGQRKDR 1647900
Score = 132 bits (283), Expect = 5e-030
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+L+I QA + V K G W SVK L R YEY+MG+VIF P+AVL+WFPFVSEFQ RLLFNQ
Sbjct: 1988791 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988970
Query: 212 AFSRGLQISRILAGGK 165
AFSRGLQIS ILAG K
Sbjct: 1988971 AFSRGLQISMILAGKK 1989018
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 134 bits (288), Expect = 1e-030
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = -3 / -1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ +I+QA KP+I+ G W SV+ L+RGYE LMG+++F PVA LAWFPFVSEFQ R+LFNQ
Sbjct: 89601 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 89422
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G +K R
Sbjct: 89421 AFSRGLQISRILGGQRKDR 89365
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 132 bits (283), Expect = 5e-030
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = -3 / -1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+L+I QA + V K G W SVK L R YEY+MG+VIF P+AVL+WFPFVSEFQ RLLFNQ
Sbjct: 65218 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 65039
Query: 212 AFSRGLQISRILAGGK 165
AFSRGLQIS ILAG K
Sbjct: 65038 AFSRGLQISMILAGKK 64991
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 129 bits (276), Expect = 5e-029
Identities = 51/73 (69%), Positives = 60/73 (82%)
Frame = -3 / +1
Query: 374 ASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGL 195
A KPV+ G WGSV+ L+RGYE +MG+++F PVA LAWFPFVSEFQ R+LFNQAFSRGL
Sbjct: 5653 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 5832
Query: 194 QISRILAGGKKQR 156
QISRIL G +K R
Sbjct: 5833 QISRILGGHRKDR 5871
>gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548593, mRNA sequence
Length = 618
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 430 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 251
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 250 MFNQAFSRGLEISLILAG 197
>gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL30a04F 3', mRNA
sequence
Length = 626
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 426 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 247
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 246 MFNQAFSRGLEISLILAG 193
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 1325 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 1504
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 1505 MFNQAFSRGLEISLILAG 1558
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 1054 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 1233
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 1234 MFNQAFSRGLEISLILAG 1287
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 125 bits (268), Expect = 6e-028
Identities = 53/74 (71%), Positives = 59/74 (79%)
Frame = -3 / +3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI Q + IKA G+W SVK L R YE +MG+VIF P+AVL+WFP VSEFQARLLFNQAF
Sbjct: 21812157 QIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVSEFQARLLFNQAF 21812336
Query: 206 SRGLQISRILAGGK 165
SRGLQIS ILAG K
Sbjct: 21812337 SRGLQISMILAGRK 21812378
Score = 111 bits (238), Expect = 8e-024
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = -3 / +1
Query: 383 ISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFS 204
I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R++FNQAFS
Sbjct: 2301040 IACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFS 2301219
Query: 203 RGLQISRILAG 171
RGL+IS ILAG
Sbjct: 2301220 RGLEISLILAG 2301252
Score = 109 bits (232), Expect = 5e-023
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = -3 / +3
Query: 395 AILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFN 216
++LQI+QA +P I+ LW + L+R Y+Y MG+V+F P+A+LAW P +S FQ R LFN
Sbjct: 4892289 SLLQIAQAVRPKIEGTSLWEFTQVLARAYDYGMGVVLFAPMAILAWLPIISAFQTRFLFN 4892468
Query: 215 QAFSRGLQISRILAGGKKQR* 153
+AF+R LQI ILAG KK R*
Sbjct: 4892469 EAFNRRLQIQPILAGKKKNR* 4892531
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
Length = 89517
Score = 125 bits (268), Expect = 6e-028
Identities = 53/74 (71%), Positives = 59/74 (79%)
Frame = -3 / +3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI Q + IKA G+W SVK L R YE +MG+VIF P+AVL+WFP VSEFQARLLFNQAF
Sbjct: 66843 QIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVSEFQARLLFNQAF 67022
Query: 206 SRGLQISRILAGGK 165
SRGLQIS ILAG K
Sbjct: 67023 SRGLQISMILAGRK 67064
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 669 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 848
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 849 MFNQAFSRGLEISLILAG 902
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 125 bits (268), Expect = 6e-028
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 5539 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 5718
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 5719 MFNQAFSRGLEISLILAG 5772
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 125 bits (268), Expect = 6e-028
Identities = 53/74 (71%), Positives = 59/74 (79%)
Frame = -3 / +1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI Q + IKA G+W SVK L R YE +MG+VIF P+AVL+WFP VSEFQARLLFNQAF
Sbjct: 21864589 QIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVSEFQARLLFNQAF 21864768
Query: 206 SRGLQISRILAGGK 165
SRGLQIS ILAG K
Sbjct: 21864769 SRGLQISMILAGRK 21864810
Score = 111 bits (238), Expect = 8e-024
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = -3 / -3
Query: 383 ISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFS 204
I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R++FNQAFS
Sbjct: 2265384 IACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFS 2265205
Query: 203 RGLQISRILAG 171
RGL+IS ILAG
Sbjct: 2265204 RGLEISLILAG 2265172
Score = 109 bits (232), Expect = 5e-023
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = -3 / +3
Query: 395 AILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFN 216
++LQI+QA +P I+ LW + L+R Y+Y MG+V+F P+A+LAW P +S FQ R LFN
Sbjct: 4902393 SLLQIAQAVRPKIEGTSLWEFTQVLARAYDYGMGVVLFAPMAILAWLPIISAFQTRFLFN 4902572
Query: 215 QAFSRGLQISRILAGGKKQR* 153
+AF+R LQI ILAG KK R*
Sbjct: 4902573 EAFNRRLQIQPILAGKKKNR* 4902635
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 125 bits (267), Expect = 8e-028
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S++ L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 627 TGWGILSIACAWKPVLKRMGMWKSIRCLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 806
Query: 224 LFNQAFSRGLQISRILAG 171
+FNQAFSRGL+IS ILAG
Sbjct: 807 MFNQAFSRGLEISLILAG 860
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 123 bits (264), Expect = 2e-027
Identities = 47/83 (56%), Positives = 65/83 (78%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+Q+ KP+I+ G+W V L+ Y+ +MG ++F+P+A +AWFPF+SEFQ R+
Sbjct: 5320 TGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRM 5499
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGL ISRIL+G +K R
Sbjct: 5500 LFNQAFSRGLHISRILSGQRKHR 5568
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 122 bits (261), Expect = 5e-027
Identities = 48/78 (61%), Positives = 64/78 (82%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R+
Sbjct: 825 TGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRM 1004
Query: 224 LFNQAFSRGLQISRILAG 171
+ NQAFSRGL+IS ILAG
Sbjct: 1005 MXNQAFSRGLEISLILAG 1058
>gb|AV522143.1|AV522143 AV522143 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ73e01F 3', mRNA
sequence
Length = 441
Score = 120 bits (257), Expect = 2e-026
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = -3 / -2
Query: 401 GWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLL 222
GW IL I+ A KPV+K G+W S+++L+R Y+ LMG++IF+PVA+ +WFPFVS FQ R++
Sbjct: 440 GWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMM 261
Query: 221 FNQAFSRGLQISRILAG 171
FNQAF RGL+IS ILAG
Sbjct: 260 FNQAFIRGLEISLILAG 210
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 116 bits (248), Expect = 3e-025
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGWA+L ++ K V++ GLW +V+ R Y+ MG++IF P+A+L+WFPF+S FQ+RL
Sbjct: 16371 TGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSPIALLSWFPFISTFQSRL 16192
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFNQAFSRGL+IS ILAG +
Sbjct: 16191 LFNQAFSRGLEISIILAGNR 16132
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 882,998,432
Number of Sequences: 1013581
Number of extensions: 12121055
Number of successful extensions: 285547
Number of sequences better than 1.0e-020: 78
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 19859753280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)