TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802485.2.1
(1118 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY136430.1| Arabidopsis thaliana unknown protein (At1g70... 207 e-120
ref|NM_105745.2| Arabidopsis thaliana unknown protein AT1G7... 207 e-120
gb|BT008378.1| Arabidopsis thaliana At1g70770 gene, complet... 207 e-120
gb|BT015536.1| Arabidopsis thaliana At1g70770 mRNA sequence 207 e-120
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 83 2e-099
gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BA... 83 2e-099
gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BA... 83 2e-099
ref|NM_102165.1| Arabidopsis thaliana unknown protein AT1G2... 211 3e-087
gb|AY735522.1| Arabidopsis thaliana hypothetical protein AT... 153 2e-083
gb|AC002311.1| Arabidopsis thaliana chromosome I BAC T26J12... 84 2e-070
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 79 4e-062
ref|NM_112021.2| Arabidopsis thaliana unknown protein AT3G1... 161 4e-062
gb|AF428353.1|AF428353 Arabidopsis thaliana AT3g11880/F26K2... 161 4e-062
emb|BX826122.1|CNS0A522 Arabidopsis thaliana Full-length cD... 118 1e-051
emb|BX813734.1|CNS0ADJN Arabidopsis thaliana Full-length cD... 111 6e-048
gb|AV536947.1|AV536947 AV536947 Arabidopsis thaliana liquid... 151 1e-045
gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome II... 58 2e-038
emb|BX816394.1|CNS0AE1T Arabidopsis thaliana Full-length cD... 95 5e-033
gb|AI994415.1|AI994415 701496183 A. thaliana, Ohio State cl... 117 2e-029
gb|AI993369.1|AI993369 701496136 A. thaliana, Ohio State cl... 116 2e-029
gb|AI992512.1|AI992512 701558051 A. thaliana, Ohio State cl... 129 1e-028
gb|T75933.1|T75933 10711 Lambda-PRL2 Arabidopsis thaliana c... 124 4e-027
gb|BE527772.1|BE527772 M69F08STM Arabidopsis developing see... 121 4e-026
>gb|AY136430.1| Arabidopsis thaliana unknown protein (At1g70770) mRNA, complete cds
Length = 2319
Score = 207 bits (446), Expect(3) = e-120
Identities = 85/151 (56%), Positives = 113/151 (74%)
Frame = +2 / +3
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVKAT
Sbjct: 1116 NPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKAT 1295
Query: 734 ERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQ 913
ERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +EA + IW +TQ
Sbjct: 1296 ERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQ 1475
Query: 914 NAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N + K + +Y EN+EA AVL K+V +W+
Sbjct: 1476 NFDCCKHWDNLYKENLEASVAVLKKLVEEWK 1568
Score = 151 bits (324), Expect(3) = e-120
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +2 / +3
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++PL HIPE V KT
Sbjct: 570 SESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKT 749
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 750 SVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 884
Score = 132 bits (283), Expect(3) = 1e-062
Identities = 69/137 (50%), Positives = 79/137 (57%)
Frame = -3 / -3
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A AS FS * LS CL S F V Q+ + ASL + S F K CC CF
Sbjct: 1537 ATLASRFSL*RLSQCLQQSKFWVTDQIAIAVASLAKTGFPSPANFRAKVNICCVTCFIAL 1358
Query: 795 EPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIER 616
PG PARA S G ASNLSVAFT A + GNV+ SNE GG KRSPFLTAPF ++ R
Sbjct: 1357 LPGAPARATSFSKGYIASNLSVAFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVR 1178
Query: 615 ALVTDKILSSNCKTKSL 565
A KI S+NC+ +SL
Sbjct: 1177 AFGFVKIFSTNCRMRSL 1127
Score = 116 bits (248), Expect(3) = e-120
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +3
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 861 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 1040
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 1041 SQGDIAVGLYSWAHNLLPVVGNKN 1112
Score = 89.0 bits (188), Expect(3) = 1e-062
Identities = 51/104 (49%), Positives = 59/104 (56%)
Frame = -3 / -3
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGMSTI 139
C FF PL P S + S H TK+P AS LIQS VL T SGI +G S
Sbjct: 880 C*PPFFPPLAPPCCAAKSVRIQSKAHNTKAPSASIGRWLIQSTDVLYTGSGI*ANGTSIS 701
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDE 7
LD DSLNIF H N T +A PK*SANL+S*+S * +YD +
Sbjct: 700 LDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSD 569
Score = 84.0 bits (177), Expect(3) = 6e-030
Identities = 47/138 (34%), Positives = 76/138 (55%)
Frame = +1 / +2
Query: 580 AVA*KNFVCHQSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGYRKV*SSLPN 759
AV *+NF + S++ +W C*+GR S FI* + ++I C C S+GYR+V* ++
Sbjct: 1142 AVG*ENFDESKGSYHTCKWSC*EGRAFDSTSFI*DLVAAYIPCIICKSKGYREV*GNISL 1321
Query: 760 DQGVGSCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNSKCRVVQAXG 939
+ GSC + + ETS TT F + + R++ QG +LV + K ++QA G
Sbjct: 1322 AERSGSCWCTRKQGDETSHTTDIHFCSEISWRRKSCFSQGSYSNCYLVCDPKL*LLQALG 1501
Query: 940 KNLS*KY*SXXCCPEQSC 993
++L + S CC ++C
Sbjct: 1502 QSLQGESGS*CCCS*KAC 1555
Score = 77.6 bits (163), Expect(3) = 2e-030
Identities = 48/145 (33%), Positives = 67/145 (46%)
Frame = -2 / -2
Query: 1003 PINHNFAQDSXXGFNIFKINSFXXLVRLCILS*APNENINSLPGELCVVFLHCFCTQR*K 824
P + ++S F I + L + +L P+ N S G + F F ++
Sbjct: 1565 PFFNKLFKNSNTSFQILLVEIVPVLAAIKVLGHRPDSNCCSFLG*NRISFSS*FQSKSEY 1386
Query: 823 LL*CLFHSF*ARRTGKSQLLDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*NRGN*AFSLS 644
LL LFH + T KS + C KP CSL+S R+C + +K* R N SL
Sbjct: 1385 LLCDLFHRLASWCTSKSHFFQQGIYCLKPLCSLYSCR*CRECKPQQDLK*RRWNQTLSLP 1206
Query: 643 NSTIQ*YRTSFGDRQNSFKQLQNQI 569
NS+I Y TS RQN QLQ++I
Sbjct: 1205 NSSIYKYGTSLWIRQNFLNQLQDEI 1131
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 36/78 (46%), Positives = 41/78 (52%)
Frame = -3 / -3
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS S P YL F + G T SGFL +A
Sbjct: 1093 GNKL*AHEYKPTAISPWEA*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANA 914
Query: 348 TKIATWALGDCCATFFEP 295
T IAT L C F P
Sbjct: 913 TNIAT*DLEVVC*PPFFP 860
Score = 55.1 bits (114), Expect(3) = 2e-030
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -2 / -2
Query: 259 DAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHLRHC*FLEHLCPCKLGCAYS 80
+ I +PQ+K S+ + ++ DPI L RNM+ + N LR +HL P KL S
Sbjct: 821 NTIKSPQHKGSKCLNWTMVDPIN*CLIHWFRNMS*RNFNQLRQRRLFKHLHPWKLHR*DS 642
Query: 79 YKCPAKVISKPHELNVLL 26
KC KVISK H LN+ L
Sbjct: 641 RKCSPKVISKSH*LNLRL 588
Score = 46.9 bits (96), Expect(3) = 6e-030
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 334 GCNLCCSCHDFKKKA*CTGKCYAKDNGKQ*ISGTGKASHHCLGYCSGLSR*PSVWHVLLG 513
G N+CC +A*C C A G+ *+SG+G AS + L SGL R* S V +G
Sbjct: 899 GGNICCISDGIA*EA*CFD*CIANSEGES*VSGSG*ASGYSLDDGSGLPR*YSCRLVFMG 1078
Query: 514 S 516
S
Sbjct: 1079 S 1081
Score = 40.9 bits (83), Expect(3) = 2e-030
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -2 / -2
Query: 517 MSPAKHARH*VTLRGLSNNPDNDGKLFLSQIFIVSHYLWHNIYQYIRLSS*SHGKNNKDC 338
+SP A +TL GLS++P+ + KL L+ I + W I Q IRL + H NK C
Sbjct: 1082 VSP*IQAYSYITLGGLSHHPNCNRKLILTLILRILPQSWQYISQSIRLPTQYHR*CNKYC 903
Query: 337 NL 332
+L
Sbjct: 902 HL 897
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 33/102 (32%), Positives = 43/102 (42%)
Frame = +1 / +2
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV*DG*HPTVPYS*GCHQDCE 192
I+ ES S +E+C*LLW I MG+DV ++ V* * YS D
Sbjct: 575 IVCESA*DSANEIC*LLWESTFWSLICAISMGEDV*RVSFV*AD*SSVSSYSGTSV*DIS 754
Query: 193 *LDQSKIF*CPGRLCFXXXXXXXXXXXXSISWP*GFKEGCTT 318
*LDQ * LC + W * ++EG +T
Sbjct: 755 *LDQPSSN*GTWSLCVVGF*LYSHRFSSTTRWC*RWEEGWST 880
>ref|NM_105745.2| Arabidopsis thaliana unknown protein AT1G70770 mRNA, complete cds
Length = 2317
Score = 207 bits (446), Expect(3) = e-120
Identities = 85/151 (56%), Positives = 113/151 (74%)
Frame = +2 / +3
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVKAT
Sbjct: 1113 NPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKAT 1292
Query: 734 ERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQ 913
ERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +EA + IW +TQ
Sbjct: 1293 ERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQ 1472
Query: 914 NAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N + K + +Y EN+EA AVL K+V +W+
Sbjct: 1473 NFDCCKHWDNLYKENLEASVAVLKKLVEEWK 1565
Score = 151 bits (324), Expect(3) = e-120
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +2 / +3
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++PL HIPE V KT
Sbjct: 567 SESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKT 746
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 747 SVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 881
Score = 132 bits (283), Expect(3) = 1e-062
Identities = 69/137 (50%), Positives = 79/137 (57%)
Frame = -3 / -1
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A AS FS * LS CL S F V Q+ + ASL + S F K CC CF
Sbjct: 1534 ATLASRFSL*RLSQCLQQSKFWVTDQIAIAVASLAKTGFPSPANFRAKVNICCVTCFIAL 1355
Query: 795 EPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIER 616
PG PARA S G ASNLSVAFT A + GNV+ SNE GG KRSPFLTAPF ++ R
Sbjct: 1354 LPGAPARATSFSKGYIASNLSVAFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVR 1175
Query: 615 ALVTDKILSSNCKTKSL 565
A KI S+NC+ +SL
Sbjct: 1174 AFGFVKIFSTNCRMRSL 1124
Score = 116 bits (248), Expect(3) = e-120
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +3
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 858 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 1037
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 1038 SQGDIAVGLYSWAHNLLPVVGNKN 1109
Score = 89.0 bits (188), Expect(3) = 1e-062
Identities = 51/104 (49%), Positives = 59/104 (56%)
Frame = -3 / -1
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGMSTI 139
C FF PL P S + S H TK+P AS LIQS VL T SGI +G S
Sbjct: 877 C*PPFFPPLAPPCCAAKSVRIQSKAHNTKAPSASIGRWLIQSTDVLYTGSGI*ANGTSIS 698
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDE 7
LD DSLNIF H N T +A PK*SANL+S*+S * +YD +
Sbjct: 697 LDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSD 566
Score = 84.0 bits (177), Expect(3) = 6e-030
Identities = 47/138 (34%), Positives = 76/138 (55%)
Frame = +1 / +2
Query: 580 AVA*KNFVCHQSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGYRKV*SSLPN 759
AV *+NF + S++ +W C*+GR S FI* + ++I C C S+GYR+V* ++
Sbjct: 1139 AVG*ENFDESKGSYHTCKWSC*EGRAFDSTSFI*DLVAAYIPCIICKSKGYREV*GNISL 1318
Query: 760 DQGVGSCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNSKCRVVQAXG 939
+ GSC + + ETS TT F + + R++ QG +LV + K ++QA G
Sbjct: 1319 AERSGSCWCTRKQGDETSHTTDIHFCSEISWRRKSCFSQGSYSNCYLVCDPKL*LLQALG 1498
Query: 940 KNLS*KY*SXXCCPEQSC 993
++L + S CC ++C
Sbjct: 1499 QSLQGESGS*CCCS*KAC 1552
Score = 77.6 bits (163), Expect(3) = 2e-030
Identities = 48/145 (33%), Positives = 67/145 (46%)
Frame = -2 / -3
Query: 1003 PINHNFAQDSXXGFNIFKINSFXXLVRLCILS*APNENINSLPGELCVVFLHCFCTQR*K 824
P + ++S F I + L + +L P+ N S G + F F ++
Sbjct: 1562 PFFNKLFKNSNTSFQILLVEIVPVLAAIKVLGHRPDSNCCSFLG*NRISFSS*FQSKSEY 1383
Query: 823 LL*CLFHSF*ARRTGKSQLLDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*NRGN*AFSLS 644
LL LFH + T KS + C KP CSL+S R+C + +K* R N SL
Sbjct: 1382 LLCDLFHRLASWCTSKSHFFQQGIYCLKPLCSLYSCR*CRECKPQQDLK*RRWNQTLSLP 1203
Query: 643 NSTIQ*YRTSFGDRQNSFKQLQNQI 569
NS+I Y TS RQN QLQ++I
Sbjct: 1202 NSSIYKYGTSLWIRQNFLNQLQDEI 1128
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 36/78 (46%), Positives = 41/78 (52%)
Frame = -3 / -1
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS S P YL F + G T SGFL +A
Sbjct: 1090 GNKL*AHEYKPTAISPWEA*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANA 911
Query: 348 TKIATWALGDCCATFFEP 295
T IAT L C F P
Sbjct: 910 TNIAT*DLEVVC*PPFFP 857
Score = 55.1 bits (114), Expect(3) = 2e-030
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -2 / -3
Query: 259 DAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHLRHC*FLEHLCPCKLGCAYS 80
+ I +PQ+K S+ + ++ DPI L RNM+ + N LR +HL P KL S
Sbjct: 818 NTIKSPQHKGSKCLNWTMVDPIN*CLIHWFRNMS*RNFNQLRQRRLFKHLHPWKLHR*DS 639
Query: 79 YKCPAKVISKPHELNVLL 26
KC KVISK H LN+ L
Sbjct: 638 RKCSPKVISKSH*LNLRL 585
Score = 46.9 bits (96), Expect(3) = 6e-030
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 334 GCNLCCSCHDFKKKA*CTGKCYAKDNGKQ*ISGTGKASHHCLGYCSGLSR*PSVWHVLLG 513
G N+CC +A*C C A G+ *+SG+G AS + L SGL R* S V +G
Sbjct: 896 GGNICCISDGIA*EA*CFD*CIANSEGES*VSGSG*ASGYSLDDGSGLPR*YSCRLVFMG 1075
Query: 514 S 516
S
Sbjct: 1076 S 1078
Score = 40.9 bits (83), Expect(3) = 2e-030
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -2 / -3
Query: 517 MSPAKHARH*VTLRGLSNNPDNDGKLFLSQIFIVSHYLWHNIYQYIRLSS*SHGKNNKDC 338
+SP A +TL GLS++P+ + KL L+ I + W I Q IRL + H NK C
Sbjct: 1079 VSP*IQAYSYITLGGLSHHPNCNRKLILTLILRILPQSWQYISQSIRLPTQYHR*CNKYC 900
Query: 337 NL 332
+L
Sbjct: 899 HL 894
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 33/102 (32%), Positives = 43/102 (42%)
Frame = +1 / +2
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV*DG*HPTVPYS*GCHQDCE 192
I+ ES S +E+C*LLW I MG+DV ++ V* * YS D
Sbjct: 572 IVCESA*DSANEIC*LLWESTFWSLICAISMGEDV*RVSFV*AD*SSVSSYSGTSV*DIS 751
Query: 193 *LDQSKIF*CPGRLCFXXXXXXXXXXXXSISWP*GFKEGCTT 318
*LDQ * LC + W * ++EG +T
Sbjct: 752 *LDQPSSN*GTWSLCVVGF*LYSHRFSSTTRWC*RWEEGWST 877
>gb|BT008378.1| Arabidopsis thaliana At1g70770 gene, complete cds
Length = 1833
Score = 207 bits (446), Expect(3) = e-120
Identities = 85/151 (56%), Positives = 113/151 (74%)
Frame = +2 / +1
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVKAT
Sbjct: 1021 NPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKAT 1200
Query: 734 ERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQ 913
ERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +EA + IW +TQ
Sbjct: 1201 ERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQ 1380
Query: 914 NAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N + K + +Y EN+EA AVL K+V +W+
Sbjct: 1381 NFDCCKHWDNLYKENLEASVAVLKKLVEEWK 1473
Score = 151 bits (324), Expect(3) = e-120
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +2 / +1
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++PL HIPE V KT
Sbjct: 475 SESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKT 654
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 655 SVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 789
Score = 132 bits (283), Expect(3) = 1e-062
Identities = 69/137 (50%), Positives = 79/137 (57%)
Frame = -3 / -2
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A AS FS * LS CL S F V Q+ + ASL + S F K CC CF
Sbjct: 1442 ATLASRFSL*RLSQCLQQSKFWVTDQIAIAVASLAKTGFPSPANFRAKVNICCVTCFIAL 1263
Query: 795 EPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIER 616
PG PARA S G ASNLSVAFT A + GNV+ SNE GG KRSPFLTAPF ++ R
Sbjct: 1262 LPGAPARATSFSKGYIASNLSVAFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVR 1083
Query: 615 ALVTDKILSSNCKTKSL 565
A KI S+NC+ +SL
Sbjct: 1082 AFGFVKIFSTNCRMRSL 1032
Score = 116 bits (248), Expect(3) = e-120
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 766 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 945
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 946 SQGDIAVGLYSWAHNLLPVVGNKN 1017
Score = 89.0 bits (188), Expect(3) = 1e-062
Identities = 51/104 (49%), Positives = 59/104 (56%)
Frame = -3 / -2
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGMSTI 139
C FF PL P S + S H TK+P AS LIQS VL T SGI +G S
Sbjct: 785 C*PPFFPPLAPPCCAAKSVRIQSKAHNTKAPSASIGRWLIQSTDVLYTGSGI*ANGTSIS 606
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDE 7
LD DSLNIF H N T +A PK*SANL+S*+S * +YD +
Sbjct: 605 LDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSD 474
Score = 84.0 bits (177), Expect(3) = 6e-030
Identities = 47/138 (34%), Positives = 76/138 (55%)
Frame = +1 / +3
Query: 580 AVA*KNFVCHQSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGYRKV*SSLPN 759
AV *+NF + S++ +W C*+GR S FI* + ++I C C S+GYR+V* ++
Sbjct: 1047 AVG*ENFDESKGSYHTCKWSC*EGRAFDSTSFI*DLVAAYIPCIICKSKGYREV*GNISL 1226
Query: 760 DQGVGSCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNSKCRVVQAXG 939
+ GSC + + ETS TT F + + R++ QG +LV + K ++QA G
Sbjct: 1227 AERSGSCWCTRKQGDETSHTTDIHFCSEISWRRKSCFSQGSYSNCYLVCDPKL*LLQALG 1406
Query: 940 KNLS*KY*SXXCCPEQSC 993
++L + S CC ++C
Sbjct: 1407 QSLQGESGS*CCCS*KAC 1460
Score = 77.6 bits (163), Expect(3) = 2e-030
Identities = 48/145 (33%), Positives = 67/145 (46%)
Frame = -2 / -1
Query: 1003 PINHNFAQDSXXGFNIFKINSFXXLVRLCILS*APNENINSLPGELCVVFLHCFCTQR*K 824
P + ++S F I + L + +L P+ N S G + F F ++
Sbjct: 1470 PFFNKLFKNSNTSFQILLVEIVPVLAAIKVLGHRPDSNCCSFLG*NRISFSS*FQSKSEY 1291
Query: 823 LL*CLFHSF*ARRTGKSQLLDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*NRGN*AFSLS 644
LL LFH + T KS + C KP CSL+S R+C + +K* R N SL
Sbjct: 1290 LLCDLFHRLASWCTSKSHFFQQGIYCLKPLCSLYSCR*CRECKPQQDLK*RRWNQTLSLP 1111
Query: 643 NSTIQ*YRTSFGDRQNSFKQLQNQI 569
NS+I Y TS RQN QLQ++I
Sbjct: 1110 NSSIYKYGTSLWIRQNFLNQLQDEI 1036
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 36/78 (46%), Positives = 41/78 (52%)
Frame = -3 / -2
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS S P YL F + G T SGFL +A
Sbjct: 998 GNKL*AHEYKPTAISPWEA*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANA 819
Query: 348 TKIATWALGDCCATFFEP 295
T IAT L C F P
Sbjct: 818 TNIAT*DLEVVC*PPFFP 765
Score = 55.1 bits (114), Expect(3) = 2e-030
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -2 / -1
Query: 259 DAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHLRHC*FLEHLCPCKLGCAYS 80
+ I +PQ+K S+ + ++ DPI L RNM+ + N LR +HL P KL S
Sbjct: 726 NTIKSPQHKGSKCLNWTMVDPIN*CLIHWFRNMS*RNFNQLRQRRLFKHLHPWKLHR*DS 547
Query: 79 YKCPAKVISKPHELNVLL 26
KC KVISK H LN+ L
Sbjct: 546 RKCSPKVISKSH*LNLRL 493
Score = 46.9 bits (96), Expect(3) = 6e-030
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 334 GCNLCCSCHDFKKKA*CTGKCYAKDNGKQ*ISGTGKASHHCLGYCSGLSR*PSVWHVLLG 513
G N+CC +A*C C A G+ *+SG+G AS + L SGL R* S V +G
Sbjct: 804 GGNICCISDGIA*EA*CFD*CIANSEGES*VSGSG*ASGYSLDDGSGLPR*YSCRLVFMG 983
Query: 514 S 516
S
Sbjct: 984 S 986
Score = 40.9 bits (83), Expect(3) = 2e-030
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -2 / -1
Query: 517 MSPAKHARH*VTLRGLSNNPDNDGKLFLSQIFIVSHYLWHNIYQYIRLSS*SHGKNNKDC 338
+SP A +TL GLS++P+ + KL L+ I + W I Q IRL + H NK C
Sbjct: 987 VSP*IQAYSYITLGGLSHHPNCNRKLILTLILRILPQSWQYISQSIRLPTQYHR*CNKYC 808
Query: 337 NL 332
+L
Sbjct: 807 HL 802
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 33/102 (32%), Positives = 43/102 (42%)
Frame = +1 / +3
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV*DG*HPTVPYS*GCHQDCE 192
I+ ES S +E+C*LLW I MG+DV ++ V* * YS D
Sbjct: 480 IVCESA*DSANEIC*LLWESTFWSLICAISMGEDV*RVSFV*AD*SSVSSYSGTSV*DIS 659
Query: 193 *LDQSKIF*CPGRLCFXXXXXXXXXXXXSISWP*GFKEGCTT 318
*LDQ * LC + W * ++EG +T
Sbjct: 660 *LDQPSSN*GTWSLCVVGF*LYSHRFSSTTRWC*RWEEGWST 785
>gb|BT015536.1| Arabidopsis thaliana At1g70770 mRNA sequence
Length = 1830
Score = 207 bits (446), Expect(3) = e-120
Identities = 85/151 (56%), Positives = 113/151 (74%)
Frame = +2 / +1
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVKAT
Sbjct: 1018 NPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKAT 1197
Query: 734 ERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQ 913
ERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +EA + IW +TQ
Sbjct: 1198 ERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQ 1377
Query: 914 NAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N + K + +Y EN+EA AVL K+V +W+
Sbjct: 1378 NFDCCKHWDNLYKENLEASVAVLKKLVEEWK 1470
Score = 151 bits (324), Expect(3) = e-120
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +2 / +1
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++PL HIPE V KT
Sbjct: 472 SESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKT 651
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 652 SVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 786
Score = 132 bits (283), Expect(3) = 1e-062
Identities = 69/137 (50%), Positives = 79/137 (57%)
Frame = -3 / -2
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A AS FS * LS CL S F V Q+ + ASL + S F K CC CF
Sbjct: 1439 ATLASRFSL*RLSQCLQQSKFWVTDQIAIAVASLAKTGFPSPANFRAKVNICCVTCFIAL 1260
Query: 795 EPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIER 616
PG PARA S G ASNLSVAFT A + GNV+ SNE GG KRSPFLTAPF ++ R
Sbjct: 1259 LPGAPARATSFSKGYIASNLSVAFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVR 1080
Query: 615 ALVTDKILSSNCKTKSL 565
A KI S+NC+ +SL
Sbjct: 1079 AFGFVKIFSTNCRMRSL 1029
Score = 116 bits (248), Expect(3) = e-120
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 763 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 942
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 943 SQGDIAVGLYSWAHNLLPVVGNKN 1014
Score = 89.0 bits (188), Expect(3) = 1e-062
Identities = 51/104 (49%), Positives = 59/104 (56%)
Frame = -3 / -2
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGMSTI 139
C FF PL P S + S H TK+P AS LIQS VL T SGI +G S
Sbjct: 782 C*PPFFPPLAPPCCAAKSVRIQSKAHNTKAPSASIGRWLIQSTDVLYTGSGI*ANGTSIS 603
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDE 7
LD DSLNIF H N T +A PK*SANL+S*+S * +YD +
Sbjct: 602 LDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSD 471
Score = 84.0 bits (177), Expect(3) = 6e-030
Identities = 47/138 (34%), Positives = 76/138 (55%)
Frame = +1 / +3
Query: 580 AVA*KNFVCHQSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGYRKV*SSLPN 759
AV *+NF + S++ +W C*+GR S FI* + ++I C C S+GYR+V* ++
Sbjct: 1044 AVG*ENFDESKGSYHTCKWSC*EGRAFDSTSFI*DLVAAYIPCIICKSKGYREV*GNISL 1223
Query: 760 DQGVGSCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNSKCRVVQAXG 939
+ GSC + + ETS TT F + + R++ QG +LV + K ++QA G
Sbjct: 1224 AERSGSCWCTRKQGDETSHTTDIHFCSEISWRRKSCFSQGSYSNCYLVCDPKL*LLQALG 1403
Query: 940 KNLS*KY*SXXCCPEQSC 993
++L + S CC ++C
Sbjct: 1404 QSLQGESGS*CCCS*KAC 1457
Score = 77.6 bits (163), Expect(3) = 2e-030
Identities = 48/145 (33%), Positives = 67/145 (46%)
Frame = -2 / -1
Query: 1003 PINHNFAQDSXXGFNIFKINSFXXLVRLCILS*APNENINSLPGELCVVFLHCFCTQR*K 824
P + ++S F I + L + +L P+ N S G + F F ++
Sbjct: 1467 PFFNKLFKNSNTSFQILLVEIVPVLAAIKVLGHRPDSNCCSFLG*NRISFSS*FQSKSEY 1288
Query: 823 LL*CLFHSF*ARRTGKSQLLDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*NRGN*AFSLS 644
LL LFH + T KS + C KP CSL+S R+C + +K* R N SL
Sbjct: 1287 LLCDLFHRLASWCTSKSHFFQQGIYCLKPLCSLYSCR*CRECKPQQDLK*RRWNQTLSLP 1108
Query: 643 NSTIQ*YRTSFGDRQNSFKQLQNQI 569
NS+I Y TS RQN QLQ++I
Sbjct: 1107 NSSIYKYGTSLWIRQNFLNQLQDEI 1033
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 36/78 (46%), Positives = 41/78 (52%)
Frame = -3 / -2
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS S P YL F + G T SGFL +A
Sbjct: 995 GNKL*AHEYKPTAISPWEA*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANA 816
Query: 348 TKIATWALGDCCATFFEP 295
T IAT L C F P
Sbjct: 815 TNIAT*DLEVVC*PPFFP 762
Score = 55.1 bits (114), Expect(3) = 2e-030
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -2 / -1
Query: 259 DAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHLRHC*FLEHLCPCKLGCAYS 80
+ I +PQ+K S+ + ++ DPI L RNM+ + N LR +HL P KL S
Sbjct: 723 NTIKSPQHKGSKCLNWTMVDPIN*CLIHWFRNMS*RNFNQLRQRRLFKHLHPWKLHR*DS 544
Query: 79 YKCPAKVISKPHELNVLL 26
KC KVISK H LN+ L
Sbjct: 543 RKCSPKVISKSH*LNLRL 490
Score = 46.9 bits (96), Expect(3) = 6e-030
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 334 GCNLCCSCHDFKKKA*CTGKCYAKDNGKQ*ISGTGKASHHCLGYCSGLSR*PSVWHVLLG 513
G N+CC +A*C C A G+ *+SG+G AS + L SGL R* S V +G
Sbjct: 801 GGNICCISDGIA*EA*CFD*CIANSEGES*VSGSG*ASGYSLDDGSGLPR*YSCRLVFMG 980
Query: 514 S 516
S
Sbjct: 981 S 983
Score = 40.9 bits (83), Expect(3) = 2e-030
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -2 / -1
Query: 517 MSPAKHARH*VTLRGLSNNPDNDGKLFLSQIFIVSHYLWHNIYQYIRLSS*SHGKNNKDC 338
+SP A +TL GLS++P+ + KL L+ I + W I Q IRL + H NK C
Sbjct: 984 VSP*IQAYSYITLGGLSHHPNCNRKLILTLILRILPQSWQYISQSIRLPTQYHR*CNKYC 805
Query: 337 NL 332
+L
Sbjct: 804 HL 799
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 33/102 (32%), Positives = 43/102 (42%)
Frame = +1 / +3
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV*DG*HPTVPYS*GCHQDCE 192
I+ ES S +E+C*LLW I MG+DV ++ V* * YS D
Sbjct: 477 IVCESA*DSANEIC*LLWESTFWSLICAISMGEDV*RVSFV*AD*SSVSSYSGTSV*DIS 656
Query: 193 *LDQSKIF*CPGRLCFXXXXXXXXXXXXSISWP*GFKEGCTT 318
*LDQ * LC + W * ++EG +T
Sbjct: 657 *LDQPSSN*GTWSLCVVGF*LYSHRFSSTTRWC*RWEEGWST 782
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 83.1 bits (175), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +2 / -3
Query: 2 GISSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLC 160
G+ SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++ LC
Sbjct: 10931931 GL*ESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVSLC 10931773
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +2 / -1
Query: 575 VLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
+ L RIL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK +
Sbjct: 10930982 ICNFLIRILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKVS 10930824
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2 / -3
Query: 149 IPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+PL HIPE V KT+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 10931691 VPLAHIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 10931518
Score = 75.8 bits (159), Expect(8) = 2e-099
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +2 / -2
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQ 472
VAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQ
Sbjct: 10931404 VAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQ 10931267
Score = 62.5 bits (130), Expect(8) = 2e-099
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2 / -1
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQE 856
+ATERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E
Sbjct: 10930748 QATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGE 10930617
Score = 53.8 bits (111), Expect(8) = 2e-099
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2 / -1
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N L +EA + IW +TQN + K + +Y EN+EA AVL K+V +W+
Sbjct: 10930529 NPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVLKKLVEEWK 10930383
Score = 38.2 bits (77), Expect(8) = 2e-099
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / -3
Query: 470 QASQGDLVSGMFCWAHSLFPTLCAKS 547
QASQGD+ G++ WAH+L P + K+
Sbjct: 10931169 QASQGDIAVGLYSWAHNLLPVVGNKN 10931092
Score = 26.3 bits (51), Expect(8) = 2e-099
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 554 NPLARDLVLQLLER 595
NP +RDL+LQL+E+
Sbjct: 10931088 NPQSRDLILQLVEK 10931047
>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence,
complete sequence
Length = 110514
Score = 83.1 bits (175), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 2 GISSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLC 160
G+ SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++ LC
Sbjct: 8217 GL*ESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVSLC 8059
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +2 / -2
Query: 575 VLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
+ L RIL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK +
Sbjct: 7268 ICNFLIRILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKVS 7110
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2 / -1
Query: 149 IPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+PL HIPE V KT+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 7977 VPLAHIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 7804
Score = 75.8 bits (159), Expect(8) = 2e-099
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +2 / -3
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQ 472
VAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQ
Sbjct: 7690 VAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQ 7553
Score = 62.5 bits (130), Expect(8) = 2e-099
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2 / -2
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQE 856
+ATERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E
Sbjct: 7034 QATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGE 6903
Score = 55.1 bits (114), Expect(4) = 8e-025
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = -3 / +1
Query: 738 LSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIERALVTDKIL 592
+ + FT A + GNV+ SNE GG KRSPFLTAPF ++ RA KIL
Sbjct: 7105 IRLTFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVRAFGFVKIL 7251
Score = 53.8 bits (111), Expect(8) = 2e-099
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2 / -2
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N L +EA + IW +TQN + K + +Y EN+EA AVL K+V +W+
Sbjct: 6815 NPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVLKKLVEEWK 6669
Score = 52.4 bits (108), Expect(4) = 8e-025
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = -3 / +2
Query: 159 HSGMSTILDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDEIP 1
H S LD DSLNIF H N T +A PK*SANL+S*+S * +YD P
Sbjct: 8060 HKLTSISLDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSYKP 8218
Score = 46.0 bits (94), Expect(4) = 8e-025
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = -3 / +3
Query: 477 EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMARTTKIATW 331
+ *AI QT+ GS S P YL F + G T SGFL +A T IAT+
Sbjct: 7548 QT*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANATNIATY 7694
Score = 45.1 bits (92), Expect(4) = 8e-025
Identities = 21/39 (53%), Positives = 21/39 (53%)
Frame = -3 / +1
Query: 843 FAHKGKSCCDACFTVFEPGGPARANSLIIG*AASNLSVA 727
F K CC CF PG PARA S G ASNLSVA
Sbjct: 6916 FRAKVNICCVTCFIALLPGAPARATSFSKGYIASNLSVA 7032
Score = 38.2 bits (77), Expect(8) = 2e-099
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / -1
Query: 470 QASQGDLVSGMFCWAHSLFPTLCAKS 547
QASQGD+ G++ WAH+L P + K+
Sbjct: 7455 QASQGDIAVGLYSWAHNLLPVVGNKN 7378
Score = 26.3 bits (51), Expect(8) = 2e-099
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -1
Query: 554 NPLARDLVLQLLER 595
NP +RDL+LQL+E+
Sbjct: 7374 NPQSRDLILQLVEK 7333
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
sequence
Length = 108582
Score = 83.1 bits (175), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +2 / +2
Query: 2 GISSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLC 160
G+ SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++ LC
Sbjct: 13973 GL*ESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVSLC 14131
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +2 / +3
Query: 575 VLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
+ L RIL+ KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK +
Sbjct: 14922 ICNFLIRILTNPKARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKVS 15080
Score = 78.0 bits (164), Expect(8) = 2e-099
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2 / +2
Query: 149 IPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+PL HIPE V KT+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 14213 VPLAHIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 14386
Score = 75.8 bits (159), Expect(8) = 2e-099
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +2 / +1
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQ 472
VAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQ
Sbjct: 14500 VAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQ 14637
Score = 62.5 bits (130), Expect(8) = 2e-099
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2 / +3
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQE 856
+ATERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E
Sbjct: 15156 QATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGE 15287
Score = 55.1 bits (114), Expect(4) = 8e-025
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = -3 / -3
Query: 738 LSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIERALVTDKIL 592
+ + FT A + GNV+ SNE GG KRSPFLTAPF ++ RA KIL
Sbjct: 15085 IRLTFTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVRAFGFVKIL 14939
Score = 53.8 bits (111), Expect(8) = 2e-099
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2 / +3
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
N L +EA + IW +TQN + K + +Y EN+EA AVL K+V +W+
Sbjct: 15375 NPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVLKKLVEEWK 15521
Score = 52.4 bits (108), Expect(4) = 8e-025
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = -3 / -1
Query: 159 HSGMSTILDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDEIP 1
H S LD DSLNIF H N T +A PK*SANL+S*+S * +YD P
Sbjct: 14130 HKLTSISLDKGDSLNIFTHGNCTDETPESALPK*SANLIS*ISG*LAYDSYKP 13972
Score = 46.0 bits (94), Expect(4) = 8e-025
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = -3 / -2
Query: 477 EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMARTTKIATW 331
+ *AI QT+ GS S P YL F + G T SGFL +A T IAT+
Sbjct: 14642 QT*AIIQTVTGSLS*P*YLGFSLRVGNTLVKASGFLRNTIANATNIATY 14496
Score = 45.1 bits (92), Expect(4) = 8e-025
Identities = 21/39 (53%), Positives = 21/39 (53%)
Frame = -3 / -3
Query: 843 FAHKGKSCCDACFTVFEPGGPARANSLIIG*AASNLSVA 727
F K CC CF PG PARA S G ASNLSVA
Sbjct: 15274 FRAKVNICCVTCFIALLPGAPARATSFSKGYIASNLSVA 15158
Score = 38.2 bits (77), Expect(8) = 2e-099
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 470 QASQGDLVSGMFCWAHSLFPTLCAKS 547
QASQGD+ G++ WAH+L P + K+
Sbjct: 14735 QASQGDIAVGLYSWAHNLLPVVGNKN 14812
Score = 26.3 bits (51), Expect(8) = 2e-099
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 554 NPLARDLVLQLLER 595
NP +RDL+LQL+E+
Sbjct: 14816 NPQSRDLILQLVEK 14857
>ref|NM_102165.1| Arabidopsis thaliana unknown protein AT1G23170 mRNA, complete cds
Length = 1710
Score = 211 bits (455), Expect(3) = 3e-087
Identities = 87/156 (55%), Positives = 116/156 (74%)
Frame = +2 / +1
Query: 539 AKSSGNPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNA 718
+ S NP +RDL+LQL+ERILS KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+A
Sbjct: 898 SSKSCNPQSRDLILQLVERILSNPKARTILVNGAVRKGERLIPPPSFEILVRLTFPASSA 1077
Query: 719 RVKATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFI 898
RVKATERFEA YP++KE++LAG PGSK +KQ +QQ+ KA E N L +EA + I
Sbjct: 1078 RVKATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKAAGEENPLLAKEAAAITI 1257
Query: 899 WCLTQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
W LTQN + K E +Y +N++A AVL K++ +W+
Sbjct: 1258 WALTQNVDCCKHWENLYTDNLKASVAVLKKLIGEWK 1365
Score = 129 bits (276), Expect(3) = 7e-053
Identities = 69/143 (48%), Positives = 80/143 (55%)
Frame = -3 / -2
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A A S * S CL S F*V+ Q+ + ASL + S AF K CC CF
Sbjct: 1334 ATLAFKLSV*RFSQCLQQSTF*VRAQIVIAAASLANKGFSSPAAFRAKVNICCVTCFIAL 1155
Query: 795 EPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIER 616
PG PAR S G ASNLSVAFT A + GNV+ SNE GG RSPFLTAPF ++ R
Sbjct: 1154 LPGAPARDTSFSKGYIASNLSVAFTLAEDAGNVSRTKISNEGGGINRSPFLTAPFTSMVR 975
Query: 615 ALVTDKILSSNCKTKSLARGFPL 547
A DKILS+N + +SL G L
Sbjct: 974 AFGLDKILSTN*RMRSLD*GLQL 906
Score = 118 bits (253), Expect(3) = 3e-087
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q S ++QVAIFV +AM LR+KPD L N++P + N KY GQ+KLP+ VW++AQA
Sbjct: 658 GKKGAQQASSKSQVAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQA 837
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + +KS
Sbjct: 838 SQGDISVGLYSWAHNLLPVVSSKS 909
Score = 91.3 bits (193), Expect(3) = 2e-030
Identities = 53/154 (34%), Positives = 76/154 (49%)
Frame = -2 / -1
Query: 1030 RTELRRXNPPINHNFAQDSXXGFNIFKINSFXXLVRLCILS*APNENINSLPGELCVVFL 851
R++L R P+ + ++S GF I I L + ILS +P+ + + G + F
Sbjct: 1389 RSQLDRTLLPLANELFKNSNTGFQIVGIKILPMLAAINILSESPDSDCSRFLG**GIFFP 1210
Query: 850 HCFCTQR*KLL*CLFHSF*ARRTGKSQLLDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*N 671
CF ++ LL L H R T K LL + C KP CSLHS R R+C S++ +K
Sbjct: 1209 GCFQSKSEYLLCDLLHCLTPRSTSKRHLLQQGIYCLKPLCSLHSCGRCRECKSNQDLKRR 1030
Query: 670 RGN*AFSLSNSTIQ*YRTSFGDRQNSFKQLQNQI 569
R N + SL NS I Y Q+ QL+N+I
Sbjct: 1029 RWNQSLSLPNSPIYKYGPGLRVGQDPLNQLKNEI 928
Score = 84.9 bits (179), Expect(3) = 8e-035
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +2 / +1
Query: 149 IPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQSPR 328
IPL HIPEAV KT++DWI+QR +ALG FVLW +D I+++L+ G KG KK AQQ+
Sbjct: 508 IPLSHIPEAVYKTSADWINQRPIEALGAFVLWGLDCILADLAVQQGGVKGGKKGAQQASS 687
Query: 329 AQVAIFVVLAMTLRRK 376
V + RK
Sbjct: 688 KSQVAIFVAVAMVLRK 735
Score = 77.6 bits (163), Expect(3) = 8e-035
Identities = 45/142 (31%), Positives = 74/142 (52%)
Frame = +1 / +3
Query: 553 ESPCKRFGFAVA*KNFVCHQSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGY 732
+S K +V *++ V + + +W C*+GR + S F+* + ++I C SEGY
Sbjct: 912 QSSVKGSHSSVG*EDLVQPEGPDHTCKWGC*EGRAIDSTSFV*DLGSTYIPCIFRKSEGY 1091
Query: 733 RKV*SSLPNDQGVGSCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNS 912
R+V* ++ +G SC SW E S T F +S+ ++ QG +L +S
Sbjct: 1092 REV*GNISLAEGGVSCWCSWE*GNEASHTANIHFCSESSRGRKSLISQGSGCNHYLGSHS 1271
Query: 913 KCRVVQAXGKNLS*KY*SXXCC 978
KC ++QA G++L ++ S CC
Sbjct: 1272 KC*LLQALGESLYRQFESQCCC 1337
Score = 68.4 bits (143), Expect(3) = 7e-053
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = -3 / -2
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS SCP YL F + G SGFL K +A
Sbjct: 890 GNKL*AHEYKPTDISPWEA*AIIQTVTGSLSCP*YLGFSLKVGNILVKASGFLRKTIATA 711
Query: 348 TKIATWALGDCCATFFEP 295
T IAT + C F P
Sbjct: 710 TNIAT*DFEEACCAPFLP 657
Score = 51.5 bits (106), Expect(3) = 7e-053
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -3 / -2
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGM 148
CCA F PL P S + S H TK+P AS LIQS VL TASGI SG+
Sbjct: 677 CCAPFLPPLTPPCCTAKSARIQSKPHNTKAPSASMGRWLIQSADVLYTASGI*ESGI 507
Score = 44.1 bits (90), Expect(3) = 2e-030
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = -1 / -3
Query: 515 EPSKTCQTLGHLERPEQ*PRQ*WEAFPVPDIYCFPLSLA*HLPVHQAFFLKSWQEQQRLQ 336
EP+ T + HL RPE + * EA+PVPD + P LA + HQ + K Q Q
Sbjct: 877 EPTSTSLLIYHLGRPEPSSKL*LEAYPVPDTWDSPSKLAIY*LKHQVSYAKPLLPPQISQ 698
Query: 335 P 333
P
Sbjct: 697 P 695
Score = 38.2 bits (77), Expect(3) = 2e-030
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2 / -1
Query: 319 LLCNLL*TLRAS*WT*QFRHDAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWD 149
LLC+ L TL S Q + I PQ K S+ + +L +PI+ L RNM +W+
Sbjct: 678 LLCSFLTTLDTSLLYSQVSKNTIQAPQYKGSKCLNGTLVNPIS*CLIHCFRNMRKWN 508
Score = 34.5 bits (69), Expect(3) = 3e-087
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3 / +2
Query: 144 LTSHCAIFLRLSSRLRVIGSVKDLLMPWETLFCGV*IASCLNCQVHQLALRVQRRLHNSL 323
L H IFL+ R ++IG L E L+CG I L ++ RV R+ HN L
Sbjct: 503 LRFHFLIFLKQCIRHQLIGLTNVPLRHLEPLYCGAWIVFLLTWLYNKEVSRVVRKEHNRL 682
Score = 25.8 bits (50), Expect(3) = 8e-035
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +3 / +2
Query: 399 CQR*WETINIWDRKSFPSLSGLLLRPLKVT*CLACFAGL 515
CQ * +I DR SF G LRP KV AC GL
Sbjct: 761 CQL*GRIPSIRDRISFQLQFG*WLRPPKVIYQ*ACTRGL 877
>gb|AY735522.1| Arabidopsis thaliana hypothetical protein AT1G23170 mRNA, complete
cds
Length = 2352
Score = 153 bits (328), Expect(5) = 2e-083
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = +2 / +1
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLM+FADYFGR+ VS++ F W K FKES +SK++DIPL HIPEAV KT
Sbjct: 589 SESYASQPEIQLMKFADYFGRSLSQVSSAHFPWVKTFKESPLSKLIDIPLSHIPEAVYKT 768
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQSPRAQVAIFVVLAMTL 367
++DWI+QR +ALG FVLW +D I+++L+ G KG KK AQQ+ V +
Sbjct: 769 SADWINQRPIEALGAFVLWGLDCILADLAVQQGGVKGGKKGAQQASSKSQVAIFVAVAMV 948
Query: 368 RRK 376
RK
Sbjct: 949 LRK 957
Score = 118 bits (253), Expect(4) = 6e-045
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q S ++QVAIFV +AM LR+KPD L N++P + N KY GQ+KLP+ VW++AQA
Sbjct: 880 GKKGAQQASSKSQVAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQA 1059
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + +KS
Sbjct: 1060 SQGDISVGLYSWAHNLLPVVSSKS 1131
Score = 95.9 bits (203), Expect(5) = 2e-083
Identities = 37/55 (67%), Positives = 49/55 (89%)
Frame = +2 / +3
Query: 611 KARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKATERFEAAYPMIKELA 775
+AR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVKATERFEA YP++K ++
Sbjct: 1191 EARTILVNGAVRKGERLIPPPSFEILVRLTFPASSARVKATERFEAIYPLLKSVS 1355
Score = 83.1 bits (175), Expect(4) = 6e-052
Identities = 49/104 (47%), Positives = 57/104 (54%)
Frame = -3 / -2
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGMSTI 139
CCA F PL P S + S H TK+P AS LIQS VL TASGI SG+S
Sbjct: 899 CCAPFLPPLTPPCCTAKSARIQSKPHNTKAPSASMGRWLIQSADVLYTASGI*ESGISIN 720
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYDDE 7
LD DSLN+ T + PK*SAN +S*+S * +YD E
Sbjct: 719 LDKGDSLNVLTQGK*ADDT*ESDLPK*SANFIS*ISG*LAYDSE 588
Score = 79.4 bits (167), Expect(5) = 2e-083
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2 / +2
Query: 761 IKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQNAESYKXXE 940
+ E L PGSK +KQ +QQ+ KA E N L +EA + IW LTQN + K E
Sbjct: 1337 LAEECLLLAPGSKAMKQVTQQIFTFALKAAGEENPLLAKEAAAITIWALTQNVDCCKHWE 1516
Query: 941 RIYLENIEAXXAVLSKVVIDWR 1006
+Y +N++A AVL K++ +W+
Sbjct: 1517 NLYTDNLKASVAVLKKLIGEWK 1582
Score = 68.4 bits (143), Expect(4) = 6e-052
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = -3 / -2
Query: 528 GNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMART 349
GN+ *A + P SP EA*AI QT+ GS SCP YL F + G SGFL K +A
Sbjct: 1112 GNKL*AHEYKPTDISPWEA*AIIQTVTGSLSCP*YLGFSLKVGNILVKASGFLRKTIATA 933
Query: 348 TKIATWALGDCCATFFEP 295
T IAT + C F P
Sbjct: 932 TNIAT*DFEEACCAPFLP 879
Score = 64.8 bits (135), Expect(4) = 6e-052
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = -3 / -3
Query: 756 G*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIERA 613
G ASNLSVAFT A + GNV+ SNE GG RSPFLTAPF ++ RA
Sbjct: 1336 GYIASNLSVAFTLAEDAGNVSRTKISNEGGGINRSPFLTAPFTSMVRA 1193
Score = 59.3 bits (123), Expect(4) = 1e-030
Identities = 39/104 (37%), Positives = 54/104 (51%)
Frame = -2 / -1
Query: 319 LLCNLL*TLRAS*WT*QFRHDAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNH 140
LLC+ L TL S Q + I PQ K S+ + +L +PI+ L RNM +W+++
Sbjct: 900 LLCSFLTTLDTSLLYSQVSKNTIQAPQYKGSKCLNGTLVNPIS*CLIHCFRNMRKWNIDQ 721
Query: 139 LRHC*FLEHLCPCKLGCAYSYKCPAKVISKPHELNVLLILV**R 8
LR LE P K+ Y + KVISK H LN+ L +* R
Sbjct: 720 LR*RRLLERFDPRKMS**YLRE*SPKVISKFH*LNLWLTRI*FR 589
Score = 52.4 bits (108), Expect(4) = 1e-030
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = -2 / -2
Query: 766 LDHWVGCFKPFCSLHSSIRNRKCGSHEQVK*NRGN*AFSLSNSTIQ*YRTSFG 608
L + C KP CSLHS R R+C S++ +K R N + SL NS I Y FG
Sbjct: 1346 LQQGIYCLKPLCSLHSCGRCRECKSNQDLKRRRWNQSLSLPNSPIYKYGPGFG 1188
Score = 47.8 bits (98), Expect(4) = 6e-052
Identities = 27/70 (38%), Positives = 32/70 (45%)
Frame = -3 / -1
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A A S * S CL S F*V+ Q+ + ASL + S AF K CC CF
Sbjct: 1551 ATLAFKLSV*RFSQCLQQSTF*VRAQIVIAAASLANKGFSSPAAFRAKVNICCVTCFIAL 1372
Query: 795 EPGGPARANS 766
PG R +S
Sbjct: 1371 LPGASKRHSS 1342
Score = 44.6 bits (91), Expect(4) = 6e-045
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1 / +3
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV*DG*HPTVPYS*GCHQDCE 192
II EST S +E+C*LLW S +G++VQG++ +* + T YS* D
Sbjct: 594 IICESTRDSANEIC*LLWEITLSSIISSFSLGQNVQGVSFI*VDRYSTFSYS*SSV*DIS 773
Query: 193 *LD 201
*LD
Sbjct: 774 *LD 782
Score = 44.1 bits (90), Expect(4) = 1e-030
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = -1 / -3
Query: 515 EPSKTCQTLGHLERPEQ*PRQ*WEAFPVPDIYCFPLSLA*HLPVHQAFFLKSWQEQQRLQ 336
EP+ T + HL RPE + * EA+PVPD + P LA + HQ + K Q Q
Sbjct: 1099 EPTSTSLLIYHLGRPEPSSKL*LEAYPVPDTWDSPSKLAIY*LKHQVSYAKPLLPPQISQ 920
Query: 335 P 333
P
Sbjct: 919 P 917
Score = 41.8 bits (85), Expect(4) = 6e-045
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1 / +2
Query: 610 QSSFYIIEWCC*KGRTLSSPCFI*LVHESHISCF*CSSEGYRKV*SSL 753
+S + +W C*+GR + S F+* + ++I C SEGYR+V* ++
Sbjct: 1190 RSPDHTCKWGC*EGRAIDSTSFV*DLGSTYIPCIFRKSEGYREV*GNI 1333
Score = 35.9 bits (72), Expect(4) = 1e-030
Identities = 29/86 (33%), Positives = 36/86 (41%)
Frame = -1 / -2
Query: 1031 QN*A*KXXPSNQSQLCSGQQXWLQYFQDKFFPXACTTLHFELSTK*KHQQPPW*ALRCFL 852
Q A*+ PS + QQ WL + K P AC+ HFE +* Q PW
Sbjct: 1607 QESA*QNAPSTRQ*AF*EQQHWLSNCRYKDSPNACSNQHFE*EPR**LQPLPWLIRDFLP 1428
Query: 851 ALLLHTKVKAVVMLVSQFLSQEDRQE 774
LL K V L S SQE ++
Sbjct: 1427 RLLSEQK*IFAV*LASLPYSQEPARD 1350
Score = 35.0 bits (70), Expect(4) = 6e-045
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +1 / +1
Query: 775 SCRSSWLKNCETSITTAFTFVCKSNARKQRRAHQGGC*CFHLVLNSKCRVVQAXGKNLS* 954
S SW E S T F +S+ ++ QG +L +SKC ++QA G++L
Sbjct: 1351 SLAGSWE*GNEASHTANIHFCSESSRGRKSLISQGSGCNHYLGSHSKC*LLQALGESLYR 1530
Query: 955 KY*SXXCC 978
++ S CC
Sbjct: 1531 QFESQCCC 1554
Score = 34.5 bits (69), Expect(5) = 2e-083
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 539 AKSSGNPLARDLVLQLLERILSVTK 613
+ S NP +RDL+LQL+ERILS K
Sbjct: 1120 SSKSCNPQSRDLILQLVERILSNPK 1194
Score = 25.8 bits (50), Expect(5) = 2e-083
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +3 / +2
Query: 399 CQR*WETINIWDRKSFPSLSGLLLRPLKVT*CLACFAGL 515
CQ * +I DR SF G LRP KV AC GL
Sbjct: 983 CQL*GRIPSIRDRISFQLQFG*WLRPPKVIYQ*ACTRGL 1099
>gb|AC002311.1| Arabidopsis thaliana chromosome I BAC T26J12 genomic sequence, complete
sequence
Length = 85855
Score = 83.5 bits (176), Expect(9) = 2e-070
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +2 / -3
Query: 149 IPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
IPL HIPEAV KT++DWI+QR +ALG FVLW +D I+++L+ G KG KK AQQ+
Sbjct: 37088 IPLSHIPEAVYKTSADWINQRPIEALGAFVLWGLDCILADLAVQQGGVKGGKKGAQQA 36915
Score = 79.4 bits (167), Expect(9) = 2e-070
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / -3
Query: 593 RILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKATER 739
RILS KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK +R
Sbjct: 36251 RILSNPKARTILVNGAVRKGERLIPPPSFEILVRLTFPASSARVKVKKR 36105
Score = 75.8 bits (159), Expect(9) = 2e-070
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +2 / -2
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQASQG 484
VAIFV +AM LR+KPD L N++P + N KY GQ+KLP+ VW++AQ +G
Sbjct: 36693 VAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQVCEG 36544
Score = 65.2 bits (136), Expect(9) = 2e-070
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELT 874
+ATERFEA YP++KE++LAG PGSK +KQ +QQ+ KA E +L+
Sbjct: 36039 QATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKAAGEGMTKLS 35890
Score = 57.4 bits (119), Expect(5) = 2e-029
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -3 / +1
Query: 726 FTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIERALVTDKIL 592
FT A + GNV+ SNE GG RSPFLTAPF ++ RA DKIL
Sbjct: 36118 FTLAEDAGNVSRTKISNEGGGINRSPFLTAPFTSMVRAFGLDKIL 36252
Score = 51.9 bits (107), Expect(5) = 2e-029
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -3 / +2
Query: 483 P*EA*AITQTMMGSFSCPRYLLFPIIFGITFTSTSGFLLKVMARTTKIATWA 328
P *AI QT+ GS SCP YL F + G SGFL K +A T IAT++
Sbjct: 36545 PSHT*AIIQTVTGSLSCP*YLGFSLKVGNILVKASGFLRKTIATATNIATYS 36700
Score = 51.5 bits (106), Expect(5) = 2e-029
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -3 / +1
Query: 318 CCATFFEPLGPADGPDNSDMMLSIHHKTKSPRASEDL*LIQSLAVLMTASGIWHSGM 148
CCA F PL P S + S H TK+P AS LIQS VL TASGI SG+
Sbjct: 36919 CCAPFLPPLTPPCCTAKSARIQSKPHNTKAPSASMGRWLIQSADVLYTASGI*ESGI 37089
Score = 44.1 bits (90), Expect(5) = 2e-029
Identities = 21/40 (52%), Positives = 21/40 (52%)
Frame = -3 / +2
Query: 846 AFAHKGKSCCDACFTVFEPGGPARANSLIIG*AASNLSVA 727
AF K CC CF PG PAR S G ASNLSVA
Sbjct: 35918 AFRAKVNICCVTCFIALLPGAPARDTSFSKGYIASNLSVA 36037
Score = 42.8 bits (87), Expect(9) = 2e-070
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 467 AQASQGDLVSGMFCWAHSLFPTLCAKS 547
AQASQGD+ G++ WAH+L P + +KS
Sbjct: 36452 AQASQGDISVGLYSWAHNLLPVVSSKS 36372
Score = 37.3 bits (75), Expect(9) = 2e-070
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1 / -3
Query: 13 IIRESTGHSTHEVC*LLWPGICSCKRIPICMGKDVQGINSV* 138
II EST S +E+C*LLW S +G++VQG++ +*
Sbjct: 37334 IICESTRDSANEIC*LLWEITLSSIISSFSLGQNVQGVSFI* 37209
Score = 32.2 bits (64), Expect(5) = 2e-029
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -3 / +3
Query: 138 LDTVDSLNIFAHANWDALTATNARPK*SANLMS*MSC*FSYD 13
LD DSLN+ T + PK*SAN +S*+S * +YD
Sbjct: 37209 LDKGDSLNVLTQGK*ADDT*ESDLPK*SANFIS*ISG*LAYD 37334
Score = 29.9 bits (59), Expect(9) = 2e-070
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 938 ERIYLENIEAXXAVLSKVVIDWR 1006
E +Y +N++A AVL K++ +W+
Sbjct: 35654 ENLYTDNLKASVAVLKKLIGEWK 35586
Score = 29.0 bits (57), Expect(9) = 2e-070
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2 / -3
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYL 952
N L +EA + IW LTQN + K R L
Sbjct: 35822 NPLLAKEAAAITIWALTQNVDCCKHWVRFTL 35730
Score = 28.6 bits (56), Expect(9) = 2e-070
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / -3
Query: 539 AKSSGNPLARDLVLQLLER 595
+ S NP +RDL+LQL+ER
Sbjct: 36383 SSKSCNPQSRDLILQLVER 36327
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 79.4 bits (167), Expect(7) = 4e-062
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / +3
Query: 593 RILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKATER 739
RILS KAR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK +R
Sbjct: 8214162 RILSNPKARTILVNGAVRKGERLIPPPSFEILVRLTFPASSARVKVKKR 8214308
Score = 75.8 bits (159), Expect(7) = 4e-062
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +2 / +2
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQASQG 484
VAIFV +AM LR+KPD L N++P + N KY GQ+KLP+ VW++AQ +G
Sbjct: 8213720 VAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQVCEG 8213869
Score = 65.2 bits (136), Expect(7) = 4e-062
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2 / +2
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELT 874
+ATERFEA YP++KE++LAG PGSK +KQ +QQ+ KA E +L+
Sbjct: 8214374 QATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKAAGEGMTKLS 8214523
Score = 42.8 bits (87), Expect(7) = 4e-062
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 467 AQASQGDLVSGMFCWAHSLFPTLCAKS 547
AQASQGD+ G++ WAH+L P + +KS
Sbjct: 8213961 AQASQGDISVGLYSWAHNLLPVVSSKS 8214041
Score = 29.9 bits (59), Expect(7) = 4e-062
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 938 ERIYLENIEAXXAVLSKVVIDWR 1006
E +Y +N++A AVL K++ +W+
Sbjct: 8214759 ENLYTDNLKASVAVLKKLIGEWK 8214827
Score = 29.0 bits (57), Expect(7) = 4e-062
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2 / +3
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYL 952
N L +EA + IW LTQN + K R L
Sbjct: 8214591 NPLLAKEAAAITIWALTQNVDCCKHWVRFTL 8214683
Score = 28.6 bits (56), Expect(7) = 4e-062
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 539 AKSSGNPLARDLVLQLLER 595
+ S NP +RDL+LQL+ER
Sbjct: 8214030 SSKSCNPQSRDLILQLVER 8214086
>ref|NM_112021.2| Arabidopsis thaliana unknown protein AT3G11880 mRNA, complete cds
Length = 1707
Score = 161 bits (347), Expect(4) = 4e-062
Identities = 73/150 (48%), Positives = 97/150 (64%)
Frame = +2 / +2
Query: 545 SSGNPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARV 724
S N + DL+LQL E ILS AR+IL+NG V +RL+ P +F+L MR TFP S+ RV
Sbjct: 656 SRSNSQSMDLILQLAEMILSNLDARTILVNGTVIDKQRLISPYAFELLMRLTFPASSERV 835
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWC 904
KATERFEA YP++KE+ALA PGS+ +KQ +QQ+ N L +EA + +W
Sbjct: 836 KATERFEAIYPLLKEVALACEPGSELMKQVTQQIFHYSLIIAGRRNLVLAKEATAIAVWS 1015
Query: 905 LTQNAESYKXXERIYLENIEAXXAVLSKVV 994
LT+N + K E++Y EN EA AVL K+V
Sbjct: 1016 LTENVDCCKQWEKLYWENKEASVAVLKKLV 1105
Score = 82.2 bits (173), Expect(3) = 6e-024
Identities = 41/86 (47%), Positives = 51/86 (59%)
Frame = -3 / -1
Query: 822 CCDACFTVFEPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFL 643
C CF PG ARA S G* ASNLSVAFT + E GNV+ + SN G R +
Sbjct: 933 C*VTCFINSLPGSQARATSFNKG*IASNLSVAFTLSDEAGNVSRIKSSNA*GEISRCLSI 754
Query: 642 TAPFNNIERALVTDKILSSNCKTKSL 565
T PF +I RA DKI+S+NC+ +S+
Sbjct: 753 TVPFTSIVRASRLDKIISANCRMRSI 676
Score = 57.4 bits (119), Expect(4) = 4e-062
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2 / +2
Query: 419 NKYLGQEKLPIIVWVIAQASQGDLVSGMFCWAHSLFP 529
++Y G +KLPI+VW++AQASQGDL G++ W+ +L P
Sbjct: 515 DEYQGHDKLPILVWMMAQASQGDLSVGLYSWSCNLLP 625
Score = 51.5 bits (106), Expect(4) = 4e-062
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2 / +2
Query: 140 MVDIPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQ 319
M+D+PL HIP +V T+ +W+ + S L FV+W ++ +++ L P G + ++
Sbjct: 251 MIDVPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQQGGHQRRTTSKF 430
Query: 320 SPRAQVAIFVVL 355
VA+ +VL
Sbjct: 431 HVAVFVALAMVL 466
Score = 41.4 bits (84), Expect(3) = 6e-024
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 534 NVGNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRY 424
N GN+ + P +SP EA*AI QT +GS SCP Y
Sbjct: 630 NTGNKLHDHEYKPTDKSPWEA*AIIQTKIGSLSCP*Y 520
Score = 35.0 bits (70), Expect(3) = 6e-024
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2 / -3
Query: 280 WT*QFRHDAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHL 137
W Q R I P K ++ R +P+ + D RNM W++NH+
Sbjct: 391 WWFQNREKTIQRPHYKGTE*PNRKFVEPLD*CVVDRYRNMR*WNINHI 248
Score = 27.6 bits (54), Expect(4) = 4e-062
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 77 VAVSASQFAWAKMFKESTVSKMVDI 151
+ +S+ Q+ W MFK S K++D+
Sbjct: 179 IKLSSVQYLWLDMFKGSPCPKLIDM 253
>gb|AF428353.1|AF428353 Arabidopsis thaliana AT3g11880/F26K24_17 mRNA, complete cds
Length = 1659
Score = 161 bits (347), Expect(4) = 4e-062
Identities = 73/150 (48%), Positives = 97/150 (64%)
Frame = +2 / +1
Query: 545 SSGNPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARV 724
S N + DL+LQL E ILS AR+IL+NG V +RL+ P +F+L MR TFP S+ RV
Sbjct: 655 SRSNSQSMDLILQLAEMILSNLDARTILVNGTVIDKQRLISPYAFELLMRLTFPASSERV 834
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWC 904
KATERFEA YP++KE+ALA PGS+ +KQ +QQ+ N L +EA + +W
Sbjct: 835 KATERFEAIYPLLKEVALACEPGSELMKQVTQQIFHYSLIIAGRRNLVLAKEATAIAVWS 1014
Query: 905 LTQNAESYKXXERIYLENIEAXXAVLSKVV 994
LT+N + K E++Y EN EA AVL K+V
Sbjct: 1015 LTENVDCCKQWEKLYWENKEASVAVLKKLV 1104
Score = 82.2 bits (173), Expect(3) = 5e-024
Identities = 41/86 (47%), Positives = 51/86 (59%)
Frame = -3 / -2
Query: 822 CCDACFTVFEPGGPARANSLIIG*AASNLSVAFTRALETGNVALMNKSNETGGTKRSPFL 643
C CF PG ARA S G* ASNLSVAFT + E GNV+ + SN G R +
Sbjct: 932 C*VTCFINSLPGSQARATSFNKG*IASNLSVAFTLSDEAGNVSRIKSSNA*GEISRCLSI 753
Query: 642 TAPFNNIERALVTDKILSSNCKTKSL 565
T PF +I RA DKI+S+NC+ +S+
Sbjct: 752 TVPFTSIVRASRLDKIISANCRMRSI 675
Score = 57.4 bits (119), Expect(4) = 4e-062
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2 / +1
Query: 419 NKYLGQEKLPIIVWVIAQASQGDLVSGMFCWAHSLFP 529
++Y G +KLPI+VW++AQASQGDL G++ W+ +L P
Sbjct: 514 DEYQGHDKLPILVWMMAQASQGDLSVGLYSWSCNLLP 624
Score = 51.5 bits (106), Expect(4) = 4e-062
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 140 MVDIPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQ 319
M+D+PL HIP +V T+ +W+ + S L FV+W ++ +++ L P G + ++
Sbjct: 250 MIDVPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQQGGHQRRTTSKF 429
Query: 320 SPRAQVAIFVVL 355
VA+ +VL
Sbjct: 430 HVAVFVALAMVL 465
Score = 41.4 bits (84), Expect(3) = 5e-024
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -3 / -2
Query: 534 NVGNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRY 424
N GN+ + P +SP EA*AI QT +GS SCP Y
Sbjct: 629 NTGNKLHDHEYKPTDKSPWEA*AIIQTKIGSLSCP*Y 519
Score = 35.0 bits (70), Expect(3) = 5e-024
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2 / -1
Query: 280 WT*QFRHDAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHL 137
W Q R I P K ++ R +P+ + D RNM W++NH+
Sbjct: 390 WWFQNREKTIQRPHYKGTE*PNRKFVEPLD*CVVDRYRNMR*WNINHI 247
Score = 27.6 bits (54), Expect(4) = 4e-062
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 77 VAVSASQFAWAKMFKESTVSKMVDI 151
+ +S+ Q+ W MFK S K++D+
Sbjct: 178 IKLSSVQYLWLDMFKGSPCPKLIDM 252
>emb|BX826122.1|CNS0A522 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL85ZG03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1580
Score = 118 bits (253), Expect(5) = 1e-051
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +2 / +1
Query: 545 SSGNPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARV 724
S N + DL+LQL E ILS AR+IL+NG V +RL+ P +F+L MR TFP S+ RV
Sbjct: 640 SRSNSQSMDLILQLAEMILSNLDARTILVNGTVIDKQRLISPYAFELLMRLTFPASSERV 819
Query: 725 KATERFEAAYPMIKELALAGPPGSKTVKQASQQL 826
KATERFEA YP++KE+ALA PGS+ +KQ +QQ+
Sbjct: 820 KATERFEAIYPLLKEVALAC*PGSE*MKQVTQQI 921
Score = 82.2 bits (173), Expect(3) = 5e-024
Identities = 44/106 (41%), Positives = 56/106 (52%)
Frame = -3 / -1
Query: 882 ASLVSSALFSCIAFAHKGKSCCDACFTVFEPGGPARANSLIIG*AASNLSVAFTRALETG 703
AS+ + K C CF PG ARA S G* ASNLSVAFT + E G
Sbjct: 977 ASMAKTRFLHPAIIKKKKHIC*VTCFIYSLPG*QARATSFNKG*IASNLSVAFTLSDEAG 798
Query: 702 NVALMNKSNETGGTKRSPFLTAPFNNIERALVTDKILSSNCKTKSL 565
NV+ + SN G R +T PF +I RA DKI+S+NC+ +S+
Sbjct: 797 NVSRIKSSNA*GEISRCLSITVPFTSIVRASRLDKIISANCRMRSI 660
Score = 57.4 bits (119), Expect(5) = 1e-051
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2 / +1
Query: 419 NKYLGQEKLPIIVWVIAQASQGDLVSGMFCWAHSLFP 529
++Y G +KLPI+VW++AQASQGDL G++ W+ +L P
Sbjct: 499 DEYQGHDKLPILVWMMAQASQGDLSVGLYSWSCNLLP 609
Score = 51.5 bits (106), Expect(5) = 1e-051
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 140 MVDIPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQ 319
M+D+PL HIP +V T+ +W+ + S L FV+W ++ +++ L P G + ++
Sbjct: 235 MIDVPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQQGGHQRRTTSKF 414
Query: 320 SPRAQVAIFVVL 355
VA+ +VL
Sbjct: 415 HVAVFVALAMVL 450
Score = 41.4 bits (84), Expect(3) = 5e-024
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 534 NVGNRE*AQQNMPDTRSP*EA*AITQTMMGSFSCPRY 424
N GN+ + P +SP EA*AI QT +GS SCP Y
Sbjct: 614 NTGNKLHDHEYKPTDKSPWEA*AIIQTKIGSLSCP*Y 504
Score = 35.0 bits (70), Expect(3) = 5e-024
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2 / -3
Query: 280 WT*QFRHDAIYTPQNKVSQGIRRSLTDPITRSLDDSLRNMAQWDVNHL 137
W Q R I P K ++ R +P+ + D RNM W++NH+
Sbjct: 375 WWFQNREKTIQRPHYKGTE*PNRKFVEPLD*CVVDRYRNMR*WNINHI 232
Score = 27.6 bits (54), Expect(5) = 1e-051
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 77 VAVSASQFAWAKMFKESTVSKMVDI 151
+ +S+ Q+ W MFK S K++D+
Sbjct: 163 IKLSSVQYLWLDMFKGSPCPKLIDM 237
Score = 25.4 bits (49), Expect(5) = 1e-051
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1 / +3
Query: 904 LNSKCRVVQAXGKNLS*KY*SXXCCPEQSC 993
L K R++QA GK L Y CC +SC
Sbjct: 1002 LYRKRRLLQAVGKTLLVDYIC*CCCS*KSC 1091
>emb|BX813734.1|CNS0ADJN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB37ZB04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1122
Score = 111 bits (237), Expect(3) = 6e-048
Identities = 45/93 (48%), Positives = 62/93 (66%)
Frame = +2 / +2
Query: 728 ATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCL 907
+TERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +EA + IW +
Sbjct: 236 STERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSV 415
Query: 908 TQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
TQN + K + +Y EN+EA AVL K+V +W+
Sbjct: 416 TQNFDCCKHWDNLYKENLEASVAVLKKLVEEWK 514
Score = 96.8 bits (205), Expect(3) = 6e-048
Identities = 39/62 (62%), Positives = 52/62 (83%)
Frame = +2 / +3
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ AR+IL+NGAVRKGERL+PP SF++ +R TFP S+ARVK
Sbjct: 60 NPQSRDLILQLVEKILTNPLARTILVNGAVRKGERLIPPPSFEILLRLTFPASSARVKCL 239
Query: 734 ER 739
+R
Sbjct: 240 QR 245
Score = 67.0 bits (140), Expect(2) = 2e-023
Identities = 38/82 (46%), Positives = 41/82 (50%)
Frame = -3 / -1
Query: 975 AXXASIFSR*ILSXCLYDSAF*VKHQMKTSTASLVSSALFSCIAFAHKGKSCCDACFTVF 796
A AS FS * LS CL S F V Q+ + ASL + S F K CC CF
Sbjct: 483 ATLASRFSL*RLSQCLQQSKFWVTDQIAIAVASLAKTGFPSPANFRAKVNICCVTCFIAL 304
Query: 795 EPGGPARANSLIIG*AASNLSV 730
PG PARA S G ASNLSV
Sbjct: 303 LPGAPARATSFSKGYIASNLSV 238
Score = 65.2 bits (136), Expect(2) = 2e-023
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -3 / -3
Query: 726 FTRALETGNVALMNKSNETGGTKRSPFLTAPFNNIERALVTDKILSSNCKTKSL 565
FT A + GNV+ SNE GG KRSPFLTAPF ++ RA KI S+NC+ +SL
Sbjct: 232 FTLADDAGNVSRNKISNEGGGIKRSPFLTAPFTSMVRANGFVKIFSTNCRMRSL 71
Score = 24.4 bits (47), Expect(3) = 6e-048
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 497 GMFCWAHSLFPTLCAKS 547
G++ WAH+L P + K+
Sbjct: 6 GLYSWAHNLLPVVGNKN 56
>gb|AV536947.1|AV536947 AV536947 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0726R 5', mRNA
sequence
Length = 426
Score = 151 bits (324), Expect(2) = 1e-045
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +2 / +2
Query: 8 SSSYENQQDIQLMRFADYFGRAFVAVSASQFAWAKMFKESTVSKMVDIPLCHIPEAVIKT 187
S SY +Q +IQLMRFADYFGRA VS+ QF W KMFKES +SK++++PL HIPE V KT
Sbjct: 5 SESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLAHIPEPVYKT 184
Query: 188 ASDWISQRSSDALGDFVLWCIDSIMSELSGPSAGPKGSKKVAQQS 322
+ DWI+ R +ALG FVLW D I+++L+ G KG KK QQ+
Sbjct: 185 SVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQT 319
Score = 55.1 bits (114), Expect(2) = 1e-045
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNK 424
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N K
Sbjct: 296 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPK 424
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence,
complete sequence
Length = 100835
Score = 58.3 bits (121), Expect(8) = 2e-038
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 587 LERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
L RILS AR+IL+NG V +RL+ P +F+L MR TFP S+ RVK +
Sbjct: 53293 LGRILSNLDARTILVNGTVIDKQRLISPYAFELLMRLTFPASSERVKVS 53439
Score = 56.5 bits (117), Expect(8) = 2e-038
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 719 RVKATERFEAAYPMIKELALAGPPGSKTVKQASQQL 826
R +ATERFEA YP++KE+ALA PGS+ +KQ +QQ+
Sbjct: 53498 RTQATERFEAIYPLLKEVALACEPGSELMKQVTQQI 53605
Score = 49.6 bits (102), Expect(8) = 2e-038
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 140 MVDIPLCHIPEAVIKTASDWISQRSSDALGDFVLWCIDSIMSELSGPSAG 289
M+D+PL HIP +V T+ +W+ + S L FV+W ++ +++ L P G
Sbjct: 52539 MIDVPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQQG 52688
Score = 48.7 bits (100), Expect(8) = 2e-038
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2 / +3
Query: 860 NAELTREAVDVFIWCLTQNAESYKXXERIYLENIEAXXAVLSKVV 994
N L +EA + +W LT+N + K E++Y EN EA AVL K+V
Sbjct: 53727 NLVLAKEATAIAVWSLTENVDCCKQWEKLYWENKEASVAVLKKLV 53861
Score = 35.4 bits (71), Expect(8) = 2e-038
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 335 VAIFVVLAMTLRRKPDVLVNVMPKI 409
VA+FV LAM LR +P+ LV V+P +
Sbjct: 52861 VAVFVALAMVLRNEPNTLVIVLPTL 52935
Score = 31.8 bits (63), Expect(8) = 2e-038
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2 / +1
Query: 419 NKYLGQEKLPIIVWVIAQ 472
++Y G +KLPI+VW++AQ
Sbjct: 52942 DEYQGHDKLPILVWMMAQ 52995
Score = 30.9 bits (61), Expect(8) = 2e-038
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 470 QASQGDLVSGMFCWAHSLFP 529
QASQGDL G++ W+ +L P
Sbjct: 53092 QASQGDLSVGLYSWSCNLLP 53151
Score = 27.6 bits (54), Expect(8) = 2e-038
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 77 VAVSASQFAWAKMFKESTVSKMVDI 151
+ +S+ Q+ W MFK S K++D+
Sbjct: 52467 IKLSSVQYLWLDMFKGSPCPKLIDM 52541
>emb|BX816394.1|CNS0AE1T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH45ZD03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1056
Score = 95.0 bits (201), Expect(2) = 5e-033
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +2 / +2
Query: 596 ILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKATERFEAAYPMIKELA 775
IL+ KA +IL NGAVRKGERL+PP SF++ +R T P S+ARVKATER EA YP++KE+A
Sbjct: 2 ILTNPKAPAILANGAVRKGERLIPPPSFEILLRLTSPASSARVKATERSEAIYPLLKEVA 181
Query: 776 LAGP 787
A P
Sbjct: 182 PAVP 193
Score = 69.3 bits (145), Expect(2) = 5e-033
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +2 / +1
Query: 788 PGSKTVKQASQQLLPLCAKAMQENNAELTREAVDVFIWCLTQNAESYKXXERIYLENIEA 967
PGSK +KQ +QQ+ K E N L +EA + + +TQN + K + +Y EN+EA
Sbjct: 193 PGSKAMKQVTQQIFTFALKLAGEGNPVLAKEATAIALSSVTQNFDCCKHWDNLYKENLEA 372
Query: 968 XXAVLSKVVIDWR 1006
AVL K+V +W+
Sbjct: 373 SVAVLKKLVEEWK 411
>gb|AI994415.1|AI994415 701496183 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496183, mRNA sequence
Length = 369
Score = 117 bits (250), Expect(2) = 2e-029
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 49 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRANPKYQGQDKLPVTVWMMAQA 228
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 229 SQGDIAVGLYSWAHNLLPVVGNKN 300
Score = 35.0 bits (70), Expect(2) = 2e-029
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 554 NPLARDLVLQLLERILSVTKAR 619
NP +RDL+LQL+E+IL+ KAR
Sbjct: 304 NPQSRDLILQLVEKILTNPKAR 369
>gb|AI993369.1|AI993369 701496136 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496136, mRNA sequence
Length = 372
Score = 116 bits (248), Expect(2) = 2e-029
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 49 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 228
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKS 547
SQGD+ G++ WAH+L P + K+
Sbjct: 229 SQGDIAVGLYSWAHNLLPVVGNKN 300
Score = 35.4 bits (71), Expect(2) = 2e-029
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +2 / +1
Query: 554 NPLARDLVLQLLERILSVTKARS 622
NP +RDL+LQL+E+IL+ KAR+
Sbjct: 304 NPQSRDLILQLVEKILTNPKART 372
>gb|AI992512.1|AI992512 701558051 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701558051, mRNA sequence
Length = 516
Score = 129 bits (277), Expect = 1e-028
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +2 / +1
Query: 698 TFPVSNARVKATERFEAAYPMIKELALAGPPGSKTVKQASQQLLPLCAKAMQENNAELTR 877
TFP S+ARVKATERFEA YP++KE+ALAG PGSK +KQ +QQ+ K E N L +
Sbjct: 1 TFPASSARVKATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAK 180
Query: 878 EAVDVFIWCLTQNAESYKXXERIYLENIEAXXAVLSKVVIDWR 1006
EA + IW +TQN + + +Y EN+EA AVL K+V +W+
Sbjct: 181 EATAIAIWSVTQNFDCCNTWDNLYKENLEASVAVLKKLVEEWK 309
>gb|T75933.1|T75933 10711 Lambda-PRL2 Arabidopsis thaliana cDNA clone 148F1T7, mRNA
sequence
Length = 415
Score = 124 bits (266), Expect = 4e-027
Identities = 50/97 (51%), Positives = 67/97 (69%)
Frame = +2 / +1
Query: 296 GSKKVAQQSPRAQVAIFVVLAMTLRRKPDVLVNVMPKIMGNNKYLGQEKLPIIVWVIAQA 475
G K Q + ++QVAIFV LAM LRRKPD L NV+P + N KY GQ+KLP+ VW++AQA
Sbjct: 49 GKKGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQA 228
Query: 476 SQGDLVSGMFCWAHSLFPTLCAKSSGNPLARDLVLQL 586
SQGD+ G++ WAH+ L + NP +R L+LQ+
Sbjct: 229 SQGDIAVGLYSWAHNFVTCLSGNXNCNPQSRXLILQV 339
>gb|BE527772.1|BE527772 M69F08STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600036727R1 5', mRNA sequence
Length = 248
Score = 121 bits (259), Expect = 4e-026
Identities = 49/73 (67%), Positives = 64/73 (87%)
Frame = +2 / +2
Query: 554 NPLARDLVLQLLERILSVTKARSILLNGAVRKGERLVPPVSFDLFMRATFPVSNARVKAT 733
NP +RDL+LQL+E+IL+ KAR+IL+N AVRKGERL+PP SF++ +R TFP S+ARVKAT
Sbjct: 29 NPQSRDLILQLVEKILTNPKARTILVNVAVRKGERLIPPPSFEILLRLTFPASSARVKAT 208
Query: 734 ERFEAAYPMIKEL 772
ERFEA YP++KE+
Sbjct: 209 ERFEAIYPLLKEV 247
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,204,570,813
Number of Sequences: 1013581
Number of extensions: 33281704
Number of successful extensions: 154434
Number of sequences better than 1.0e-020: 27
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 77239944495
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)