TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696657.2.1
(1531 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2... 273 5e-084
dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for put... 221 9e-081
ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5... 221 9e-081
gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complet... 221 9e-081
gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, compl... 220 2e-080
gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4... 167 2e-080
ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONA... 167 2e-080
gb|AY065210.1| Arabidopsis thaliana putative polygalacturon... 167 2e-080
emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for ex... 167 2e-080
gb|AY133812.1| Arabidopsis thaliana clone U18487 putative p... 167 2e-080
ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3... 212 2e-080
ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3... 207 4e-079
emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for poly... 209 2e-078
gb|AY065239.1| Arabidopsis thaliana putative polygalacturon... 208 2e-078
ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3... 208 2e-078
gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, compl... 208 2e-078
emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cD... 208 2e-078
gb|AY096534.1| Arabidopsis thaliana putative polygalacturon... 208 2e-078
ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2... 232 3e-076
ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2... 232 3e-076
emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cD... 209 7e-076
ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4... 232 7e-076
emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cD... 270 2e-075
ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2... 231 2e-075
ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1... 169 3e-075
ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2... 230 4e-074
ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2... 181 9e-074
ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1... 239 1e-073
ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1... 167 2e-073
gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase fam... 239 2e-073
ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1... 239 2e-073
ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4... 202 3e-072
emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase 170 4e-072
ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1... 239 5e-072
ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3... 170 6e-072
emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, com... 202 9e-072
emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for ex... 170 5e-071
gb|AY091200.1| Arabidopsis thaliana putative exopolygalactu... 170 2e-070
emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cD... 165 2e-070
gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pect... 170 3e-070
ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3... 170 4e-070
gb|AY056173.1| Arabidopsis thaliana putative exopolygalactu... 170 4e-070
gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pect... 170 5e-070
emb|AX652128.1| Sequence 1979 from Patent WO03000898 167 1e-069
gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis tha... 167 1e-069
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 190 5e-069
dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosom... 213 6e-069
gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome II... 203 6e-068
emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene 165 3e-067
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 180 1e-066
dbj|AK117953.1| Arabidopsis thaliana At3g07830 mRNA for put... 207 5e-066
emb|AJ223189.1|ATAJ3189 Arabidopsis thaliana PGA2 gene 165 4e-064
gb|DQ056577.1| Arabidopsis thaliana putative polygalacturon... 155 2e-061
ref|NM_129948.1| Arabidopsis thaliana polygalacturonase AT2... 155 2e-061
ref|NM_180028.1| Arabidopsis thaliana polygalacturonase AT2... 138 2e-061
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 165 5e-061
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 165 7e-061
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 165 1e-060
emb|AX651258.1| Sequence 42 from Patent WO03000898 152 1e-060
ref|NM_129949.1| Arabidopsis thaliana polygalacturonase AT2... 152 1e-060
gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23... 169 2e-060
gb|AY078936.1| Arabidopsis thaliana At2g41850/T11A7.5 mRNA,... 138 2e-060
emb|AX651722.1| Sequence 554 from Patent WO03000898 134 2e-060
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 180 8e-060
gb|BT005245.1| Arabidopsis thaliana At3g07830 mRNA, complet... 185 2e-059
gb|AU238792.1|AU238792 AU238792 RAFL19 Arabidopsis thaliana... 207 2e-059
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 179 7e-059
ref|NM_102195.1| Arabidopsis thaliana polygalacturonase AT1... 132 7e-059
gb|BT020180.1| Arabidopsis thaliana At3g59850 mRNA, complet... 155 7e-059
gb|BT015766.1| Arabidopsis thaliana At3g59850 mRNA, complet... 155 1e-058
emb|BX823105.1|CNS0A4UN Arabidopsis thaliana Full-length cD... 155 1e-058
ref|NM_115848.3| Arabidopsis thaliana polygalacturonase AT3... 155 1e-058
emb|AX507825.1| Sequence 2520 from Patent WO0216655 132 1e-058
ref|NM_100446.1| Arabidopsis thaliana polygalacturonase AT1... 132 1e-058
gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26... 180 2e-058
ref|NM_105231.1| Arabidopsis thaliana polygalacturonase AT1... 163 3e-058
emb|BX824927.1|CNS0A4TY Arabidopsis thaliana Full-length cD... 155 4e-058
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 169 4e-058
gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G2... 175 8e-058
gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated g... 175 1e-057
ref|NM_129950.1| Arabidopsis thaliana polygalacturonase AT2... 137 1e-057
emb|AX412563.1| Sequence 327 from Patent WO0222675 134 4e-057
gb|BT005376.1| Arabidopsis thaliana At3g57510 mRNA, complet... 134 4e-057
emb|AX651724.1| Sequence 557 from Patent WO03000898 134 4e-057
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 179 6e-057
ref|NM_100445.1| Arabidopsis thaliana polygalacturonase AT1... 127 6e-057
dbj|AK117942.1| Arabidopsis thaliana At3g57510 mRNA for put... 134 8e-057
ref|NM_115611.2| Arabidopsis thaliana ADPG1; polygalacturon... 134 8e-057
emb|BX822380.1|CNS0A76T Arabidopsis thaliana Full-length cD... 155 3e-056
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 179 3e-056
gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O1... 180 7e-056
gb|BT000611.1| Arabidopsis thaliana putative polygalacturon... 148 2e-054
emb|BX813651.1|CNS0AEBF Arabidopsis thaliana Full-length cD... 132 3e-054
gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA,... 148 4e-054
ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1... 148 6e-054
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 213 1e-053
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 213 1e-053
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 179 3e-053
gb|DQ056578.1| Arabidopsis thaliana putative polygalacturon... 134 1e-052
ref|NM_129951.1| Arabidopsis thaliana polygalacturonase AT2... 134 1e-052
dbj|AK117620.1| Arabidopsis thaliana At3g26610 mRNA for put... 131 2e-052
ref|NM_113570.2| Arabidopsis thaliana polygalacturonase AT3... 131 2e-052
gb|AY142668.1| Arabidopsis thaliana putative polygalacturon... 131 3e-052
gb|AY046002.1| Arabidopsis thaliana putative polygalacturon... 131 3e-052
ref|NM_106666.2| Arabidopsis thaliana polygalacturonase AT1... 131 4e-052
emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cD... 148 6e-052
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 100 1e-051
emb|BX813348.1|CNS0AE3X Arabidopsis thaliana Full-length cD... 128 1e-051
ref|NM_105718.1| Arabidopsis thaliana polygalacturonase AT1... 134 3e-051
emb|BX822956.1|CNS0A7SM Arabidopsis thaliana Full-length cD... 95 4e-051
emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome ... 100 5e-051
gb|AY096360.1| Arabidopsis thaliana putative polygalacturon... 147 7e-051
ref|NM_111676.3| Arabidopsis thaliana polygalacturonase AT3... 133 8e-051
gb|AY050798.1| Arabidopsis thaliana putative polygalacturon... 147 1e-050
gb|AF410319.1|AF410319 Arabidopsis thaliana At1g48100/F21D1... 147 1e-050
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 203 1e-050
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 203 1e-050
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 100 2e-050
ref|NM_103706.2| Arabidopsis thaliana polygalacturonase AT1... 147 2e-050
emb|BX831614.1|CNS09YP6 Arabidopsis thaliana Full-length cD... 141 1e-049
ref|NM_121469.3| Arabidopsis thaliana polygalacturonase AT5... 141 1e-049
ref|NM_104548.2| Arabidopsis thaliana polygalacturonase AT1... 145 1e-049
emb|BX825672.1|CNS0A7UV Arabidopsis thaliana Full-length cD... 114 2e-049
gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O... 115 2e-049
ref|NM_112442.1| Arabidopsis thaliana polygalacturonase AT3... 125 2e-049
gb|AY089177.1| Arabidopsis thaliana clone 6 mRNA, complete ... 124 5e-049
emb|BX821033.1|CNS0AACW Arabidopsis thaliana Full-length cD... 102 1e-048
emb|AL772721.1| Arabidopsis thaliana transposon insertion S... 196 1e-048
gb|BT005780.1| Arabidopsis thaliana clone RAFL14-98-K19 (R2... 141 2e-048
gb|BX836604.1|BX836604 BX836604 Arabidopsis thaliana Flower... 84 7e-048
emb|BX814380.1|CNS0AC2P Arabidopsis thaliana Full-length cD... 148 9e-048
emb|BX824469.1|CNS0A6Z5 Arabidopsis thaliana Full-length cD... 136 1e-047
emb|X97828.1|ATORF06 A.thaliana mRNA (orf06) from chromosom... 131 2e-047
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 100 5e-047
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 154 1e-046
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 190 1e-046
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 118 2e-046
emb|BX816284.1|CNS0AD4M Arabidopsis thaliana Full-length cD... 145 2e-046
ref|NM_119732.2| Arabidopsis thaliana polygalacturonase AT4... 132 2e-045
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 97 3e-045
gb|BT023462.1| Arabidopsis thaliana At1g02460 gene, complet... 99 1e-044
ref|NM_100127.2| Arabidopsis thaliana polygalacturonase AT1... 99 1e-044
emb|BX816708.1|CNS0AD6H Arabidopsis thaliana Full-length cD... 129 2e-044
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 180 1e-043
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 179 2e-043
ref|NM_148391.1| Arabidopsis thaliana polygalacturonase AT4... 151 3e-043
ref|NM_116419.2| Arabidopsis thaliana polygalacturonase AT4... 97 9e-043
ref|NM_121726.1| Arabidopsis thaliana polygalacturonase AT5... 126 1e-042
gb|CK118633.1|CK118633 216g11.p1 AtM1 Arabidopsis thaliana ... 162 1e-042
emb|BX813953.1|CNS0AEHM Arabidopsis thaliana Full-length cD... 130 4e-042
ref|NM_123354.1| Arabidopsis thaliana polygalacturonase AT5... 145 5e-042
gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BA... 66 2e-041
gb|AI994651.1|AI994651 701499138 A. thaliana, Ohio State cl... 127 2e-040
emb|BX815901.1|CNS0AEH8 Arabidopsis thaliana Full-length cD... 87 5e-040
gb|AF037367.1| Arabidopsis thaliana endo-polygalacturonase ... 70 2e-039
emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome ... 91 3e-039
ref|NM_122635.2| Arabidopsis thaliana polygalacturonase AT5... 132 3e-039
ref|NM_123851.1| Arabidopsis thaliana polygalacturonase AT5... 127 6e-039
emb|AJ002532.1|ATAJ2532 Arabidopsis thaliana ADPG1 gene 70 7e-039
gb|AY039852.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 133 9e-039
ref|NM_100940.3| Arabidopsis thaliana polygalacturonase AT1... 133 1e-038
ref|NM_123852.1| Arabidopsis thaliana polygalacturonase AT5... 122 2e-037
gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, compl... 88 3e-037
emb|AX461137.1| Sequence 66 from Patent WO0198480 61 5e-036
emb|AX461255.1| Sequence 184 from Patent WO0198480 61 5e-036
gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis tha... 60 8e-035
ref|NM_106663.1| Arabidopsis thaliana polygalacturonase AT1... 125 8e-035
gb|AY143959.1| Arabidopsis thaliana At1g10640/F20B24_8 mRNA... 133 1e-034
emb|CQ805350.1| Sequence 1761 from Patent WO2004035798 133 1e-034
emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome ... 70 4e-033
ref|NM_119389.2| Arabidopsis thaliana polygalacturonase AT4... 72 6e-033
ref|NM_119390.2| Arabidopsis thaliana polygalacturonase AT4... 121 1e-032
emb|BX813497.1|CNS0ADHO Arabidopsis thaliana Full-length cD... 99 1e-031
gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A... 61 1e-031
gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis tha... 58 2e-031
gb|B28793.1|B28793 T19O12TR TAMU Arabidopsis thaliana genom... 92 4e-031
gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5... 58 6e-031
dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosom... 60 7e-031
gb|AW004489.1|AW004489 701931827 A. thaliana, mixed source ... 112 2e-030
gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis tha... 86 1e-029
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 64 1e-029
gb|AV782140.1|AV782140 AV782140 RAFL4 Arabidopsis thaliana ... 66 4e-029
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 61 5e-029
gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BA... 62 2e-027
gb|B09328.1|B09328 F2P23-T7 IGF Arabidopsis thaliana genomi... 86 3e-027
gb|AQ964056.1|AQ964056 LERGU38TF LERG Arabidopsis thaliana ... 100 1e-026
gb|AQ964057.1|AQ964057 LERGU38TR LERG Arabidopsis thaliana ... 100 1e-026
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 59 5e-026
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 59 6e-026
gb|AQ010492.1|AQ010492 F23M1TFB IGF Arabidopsis thaliana ge... 101 9e-026
gb|AI995224.1|AI995224 701502760 A. thaliana, Ohio State cl... 120 1e-025
gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from... 59 1e-025
gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from... 59 1e-025
emb|AJ552539.1|ATH552539 Arabidopsis thaliana T-DNA flankin... 77 2e-025
gb|AQ961164.1|AQ961164 LERFJ55TF LERA Arabidopsis thaliana ... 51 2e-025
gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromoso... 54 5e-025
gb|BH792479.1|BH792479 SALK_064312.54.50.x Arabidopsis thal... 118 5e-025
gb|BZ666496.1|BZ666496 SGT6366-3-3 Arabidopsis thaliana Ds ... 118 5e-025
emb|CR357101.1| Arabidopsis thaliana T-DNA flanking sequenc... 118 5e-025
gb|AI993509.1|AI993509 701496530 A. thaliana, Ohio State cl... 90 8e-025
gb|B12788.1|B12788 F7K19-T7 IGF Arabidopsis thaliana genomi... 73 1e-024
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 54 1e-024
dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosom... 54 4e-024
gb|B78058.1|B78058 T30C17TR TAMU Arabidopsis thaliana genom... 75 1e-023
gb|CL504361.1|CL504361 SAIL_736_A05.v1 SAIL Collection Arab... 68 2e-023
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 54 4e-023
emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome... 54 4e-023
gb|B09652.1|B09652 T25H4-T7 TAMU Arabidopsis thaliana genom... 53 8e-023
dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosom... 84 1e-022
gb|R29820.1|R29820 12425 Lambda-PRL2 Arabidopsis thaliana c... 110 2e-022
gb|BP815552.1|BP815552 BP815552 RAFL19 Arabidopsis thaliana... 109 2e-022
gb|CD531316.1|CD531316 10F09 Arabidopsis Leaf Senescence Li... 87 3e-022
gb|CW800882.1|CW800882 WiscDsLox289_292L7 Arabidopsis thali... 58 4e-022
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 50 3e-021
emb|BX894310.1| Arabidopsis thaliana T-DNA flanking sequenc... 81 7e-021
>ref|NM_128875.1| Arabidopsis thaliana polygalacturonase AT2G33160 mRNA, complete cds
Length = 1995
Score = 273 bits (590), Expect(4) = 5e-084
Identities = 107/255 (41%), Positives = 162/255 (63%)
Frame = -2 / +1
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+K N + + + V ++ + G++ +NSK H N+ + E + V +TAP D NT
Sbjct: 427 NKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNT 606
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+ +G SS + I N TIGTGDDC++I G + + + + CGPG GISVG LGRYK+EK+
Sbjct: 607 DGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKN 786
Query: 687 VSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKV 508
V +TVRN ++ TT+G+RIK++ + S ++ S+ +ENI+M V NPIVIDQ +CP
Sbjct: 787 VQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQ 966
Query: 507 CPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKT 328
C +SHV +KDV + NI GTS++ EA+ + CS+T PC V L ++N+ Y G++
Sbjct: 967 CDSPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLV 1146
Query: 327 MAVCSNAKGTAKGSI 283
A+C N G+ +G I
Sbjct: 1147 TALCENVGGSIRGKI 1191
Score = 122 bits (260), Expect = 4e-026
Identities = 88/256 (34%), Positives = 114/256 (44%)
Frame = +2 / -2
Query: 209 SSRMRYHACMQKEGHHQTRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLH 388
SS + + + M G + + ++LP P A+ P L T
Sbjct: 1265 SSNVEFESVMMLLGRKRFILQFAGTILPRIEPPTFSHKAVTKPSRPT*CKLIFESSTS*Q 1086
Query: 389 GCVSEQSRLMASGVDDVPVMLRNVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSIL 568
G V AS + +VP +L +TS T E H CGQ SMT+G T I
Sbjct: 1085 GNVLLHCIFKASLLVEVPQILLYLTSFI*T*EAYFPGLSHCPCGQYC*SMTIGFPTLIIW 906
Query: 569 MFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQ 748
MFS ++E D+ + L+R P VV L +F TV T FSSL PR PTL+PCPGP
Sbjct: 905 MFSYKKFETEICDTDLAHVLIRKPSVVPLIIEFLTVKPWTFFSSLYLPRLPTLIPCPGPH 726
Query: 749 VMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSE 928
+ L P I QSSPVP+V L + I + P PSV S GAV T + S
Sbjct: 725 LTSEISKLLVPSRIAIQSSPVPIVTL*ICIWLDFPILIPSVLGLSPGAVMVTPVMLKSST 546
Query: 929 LSMLMWKNLELSSLIP 976
+ L L L L P
Sbjct: 545 ENKLKCPILLLMDLRP 498
Score = 35.9 bits (72), Expect(4) = 5e-084
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGT 1063
WI +V+N+ +TG G LDGQG+
Sbjct: 334 WILFKYVDNLTVTGGGLLDGQGS 402
Score = 33.6 bits (67), Expect(4) = 5e-084
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2 / +1
Query: 1275 GSATVVIPKGDYLVGPLNFTGPCKGS 1198
G +TV IP G + + + F+GPCK S
Sbjct: 190 GRSTVYIPSGIFYLRQVTFSGPCKSS 267
Score = 30.4 bits (60), Expect(4) = 5e-084
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACE 1282
FD+ GA +D + D A AW AC+
Sbjct: 94 FDVRNYGARADSQRDNAFAFTKAWNEACQ 180
>dbj|AK118684.1| Arabidopsis thaliana At5g48140 mRNA for putative polygalacturonase,
complete cds, clone: RAFL19-95-F20
Length = 1466
Score = 221 bits (477), Expect(4) = 9e-081
Identities = 89/180 (49%), Positives = 124/180 (68%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT N K +P ++ V +A + GI L++K FHIN+ ++++T +DV + APA+ NTD
Sbjct: 502 KTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTD 681
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+HVG S I I+NS I TGDDCVS+G G +LV+ +TCGPG GIS+G LGRY E++V
Sbjct: 682 GIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENV 861
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I + NC L+ T NG+RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 862 SGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1041
Score = 144 bits (309), Expect(2) = 5e-035
Identities = 78/179 (43%), Positives = 94/179 (52%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM MGL T MFSK EAV +A + L+ PL V Q +M L
Sbjct: 1040 HWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPL 861
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T S L PR P L+PCPGP V LST+ P P ETQSSPV + EL +LI PTW P
Sbjct: 860 TFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIP 681
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLGIAFTLSV 1042
SV SAGA+ TS V LMWK ++P A +T ++ ++G L V
Sbjct: 680 SVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKV 504
Score = 62.0 bits (129), Expect(4) = 9e-081
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -2 / +1
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ S + + +++F+ I GTS +A+ LLCS+ PC V + DVN++Y G + C
Sbjct: 1045 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1224
Query: 315 SNAKGTAKGS 286
SN G+
Sbjct: 1225 SNVSPKLVGT 1254
Score = 48.3 bits (99), Expect(4) = 9e-081
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+D T A+ A+ AC+ +TV+IPKG+Y +G + GPCK
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK 339
Score = 31.3 bits (62), Expect(2) = 5e-035
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GI TV HA ++A A V S
Sbjct: 338 LHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
Score = 30.4 bits (60), Expect(4) = 9e-081
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAW 483
>ref|NM_124188.2| Arabidopsis thaliana polygalacturonase AT5G48140 mRNA, complete cds
Length = 1439
Score = 221 bits (477), Expect(4) = 9e-081
Identities = 89/180 (49%), Positives = 124/180 (68%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT N K +P ++ V +A + GI L++K FHIN+ ++++T +DV + APA+ NTD
Sbjct: 502 KTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTD 681
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+HVG S I I+NS I TGDDCVS+G G +LV+ +TCGPG GIS+G LGRY E++V
Sbjct: 682 GIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENV 861
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I + NC L+ T NG+RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 862 SGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1041
Score = 144 bits (309), Expect(2) = 5e-035
Identities = 78/179 (43%), Positives = 94/179 (52%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM MGL T MFSK EAV +A + L+ PL V Q +M L
Sbjct: 1040 HWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPL 861
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T S L PR P L+PCPGP V LST+ P P ETQSSPV + EL +LI PTW P
Sbjct: 860 TFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIP 681
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLGIAFTLSV 1042
SV SAGA+ TS V LMWK ++P A +T ++ ++G L V
Sbjct: 680 SVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKV 504
Score = 62.0 bits (129), Expect(4) = 9e-081
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -2 / +1
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ S + + +++F+ I GTS +A+ LLCS+ PC V + DVN++Y G + C
Sbjct: 1045 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1224
Query: 315 SNAKGTAKGS 286
SN G+
Sbjct: 1225 SNVSPKLVGT 1254
Score = 48.3 bits (99), Expect(4) = 9e-081
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+D T A+ A+ AC+ +TV+IPKG+Y +G + GPCK
Sbjct: 214 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK 339
Score = 31.3 bits (62), Expect(2) = 5e-035
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GI TV HA ++A A V S
Sbjct: 338 LHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 216
Score = 30.4 bits (60), Expect(4) = 9e-081
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 406 WVAFRNINGFKLNGGGVFDGEGNAAW 483
>gb|BT009687.1| Arabidopsis thaliana At5g48140 mRNA, complete cds
Length = 1188
Score = 221 bits (477), Expect(4) = 9e-081
Identities = 89/180 (49%), Positives = 124/180 (68%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT N K +P ++ V +A + GI L++K FHIN+ ++++T +DV + APA+ NTD
Sbjct: 388 KTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTD 567
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+HVG S I I+NS I TGDDCVS+G G +LV+ +TCGPG GIS+G LGRY E++V
Sbjct: 568 GIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENV 747
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I + NC L+ T NG+RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 748 SGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 927
Score = 144 bits (309), Expect(2) = 4e-035
Identities = 78/179 (43%), Positives = 94/179 (52%)
Frame = +2 / -2
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM MGL T MFSK EAV +A + L+ PL V Q +M L
Sbjct: 926 HWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPL 747
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T S L PR P L+PCPGP V LST+ P P ETQSSPV + EL +LI PTW P
Sbjct: 746 TFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIP 567
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLGIAFTLSV 1042
SV SAGA+ TS V LMWK ++P A +T ++ ++G L V
Sbjct: 566 SVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKV 390
Score = 62.0 bits (129), Expect(4) = 9e-081
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -2 / +1
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ S + + +++F+ I GTS +A+ LLCS+ PC V + DVN++Y G + C
Sbjct: 931 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1110
Query: 315 SNAKGTAKGS 286
SN G+
Sbjct: 1111 SNVSPKLVGT 1140
Score = 48.3 bits (99), Expect(4) = 9e-081
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+D T A+ A+ AC+ +TV+IPKG+Y +G + GPCK
Sbjct: 100 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK 225
Score = 31.3 bits (62), Expect(2) = 4e-035
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2 / -2
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GI TV HA ++A A V S
Sbjct: 224 LHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 102
Score = 30.4 bits (60), Expect(4) = 9e-081
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 292 WVAFRNINGFKLNGGGVFDGEGNAAW 369
>gb|AY089015.1| Arabidopsis thaliana clone 16377 mRNA, complete sequence
Length = 1462
Score = 220 bits (475), Expect(4) = 2e-080
Identities = 89/180 (49%), Positives = 124/180 (68%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT N K +P ++ V +A + GI L++K FHIN+ ++++T +DV + APA+ NTD
Sbjct: 500 KTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNMTFEDVKIIAPAESPNTD 679
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+HVG S I I+NS I TGDDCVS+G G +LV+ +TCGPG GIS+G LGRY E++V
Sbjct: 680 GIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENV 859
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I + NC L+ T NG+RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 860 SGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 1039
Score = 147 bits (315), Expect(2) = 8e-036
Identities = 79/179 (44%), Positives = 95/179 (53%)
Frame = +2 / -2
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM MGL T MFSK EAV +A + L+ PL V Q +M L
Sbjct: 1038 HWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPL 859
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T S L PR P L+PCPGP V LST+ P P ETQSSPV + EL +LI PTW P
Sbjct: 858 TFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIP 679
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLGIAFTLSV 1042
SV SAGA+ TS VM LMWK ++P A +T ++ ++G L V
Sbjct: 678 SVLGLSAGAMILTSSNVMFFAPMTLMWKCFASKEVMPLIFASVTKSNLMLMGSFLQLKV 502
Score = 62.0 bits (129), Expect(4) = 2e-080
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ S + + +++F+ I GTS +A+ LLCS+ PC V + DVN++Y G + C
Sbjct: 1043 KQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQC 1222
Query: 315 SNAKGTAKGS 286
SN G+
Sbjct: 1223 SNVSPKLVGT 1252
Score = 48.3 bits (99), Expect(4) = 2e-080
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +2
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+D T A+ A+ AC+ +TV+IPKG+Y +G + GPCK
Sbjct: 212 SDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK 337
Score = 31.3 bits (62), Expect(2) = 8e-036
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2 / -2
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GI TV HA ++A A V S
Sbjct: 336 LHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNALVIS 214
Score = 30.4 bits (60), Expect(4) = 2e-080
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 404 WVAFRNINGFKLNGGGVFDGEGNAAW 481
>gb|AF428425.1|AF428425 Arabidopsis thaliana At1g02790/T14P4_2 mRNA, complete cds
Length = 1571
Score = 167 bits (360), Expect(5) = 2e-080
Identities = 63/134 (47%), Positives = 96/134 (71%)
Frame = -2 / +1
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L ++ N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ +
Sbjct: 574 PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNAD 753
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+SIL+STI TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC
Sbjct: 754 NVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNC 933
Query: 660 VLKNTTNGVRIKSY 619
+ T NG+RIK++
Sbjct: 934 TMIETDNGLRIKTW 975
Score = 114 bits (243), Expect(4) = 2e-032
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 968 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 789
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 788 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 618
Score = 72.5 bits (152), Expect(5) = 2e-080
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 501 GKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
G R S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1069 GSRGGDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1230
Score = 71.6 bits (150), Expect(5) = 2e-080
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+DI+K GA DG T+ KA + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 223 YDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 387
Score = 49.2 bits (101), Expect(4) = 2e-032
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2 / -1
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
+ + L LHGP K+ GP + PLG ++VA SH +H A V PS AP+L +S
Sbjct: 404 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPSPTAPNLVIS 225
Score = 34.1 bits (68), Expect(5) = 2e-080
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 445 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 531
Score = 33.1 bits (66), Expect(5) = 2e-080
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -1
Query: 437 VPVMLRNVTSLTETCE 484
VP+M N SL TCE
Sbjct: 1133 VPLMFLNKISLIATCE 1086
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -3
Query: 526 VLVDDDGVGHLLHPDVLE 579
VL++DD V LH DV +
Sbjct: 1065 VLINDDWVLDTLHDDVFK 1012
>ref|NM_100158.1| Arabidopsis thaliana PGA4 (POLYGALACTURONASE 4); polygalacturonase
AT1G02790 (PGA4) mRNA, complete cds
Length = 1571
Score = 167 bits (360), Expect(5) = 2e-080
Identities = 63/134 (47%), Positives = 96/134 (71%)
Frame = -2 / +1
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L ++ N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ +
Sbjct: 574 PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNAD 753
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+SIL+STI TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC
Sbjct: 754 NVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNC 933
Query: 660 VLKNTTNGVRIKSY 619
+ T NG+RIK++
Sbjct: 934 TMIETDNGLRIKTW 975
Score = 114 bits (243), Expect(4) = 2e-032
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 968 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 789
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 788 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 618
Score = 72.5 bits (152), Expect(5) = 2e-080
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 501 GKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
G R S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1069 GSRGGDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1230
Score = 71.6 bits (150), Expect(5) = 2e-080
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+DI+K GA DG T+ KA + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 223 YDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 387
Score = 49.2 bits (101), Expect(4) = 2e-032
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2 / -1
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
+ + L LHGP K+ GP + PLG ++VA SH +H A V PS AP+L +S
Sbjct: 404 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPSPTAPNLVIS 225
Score = 34.1 bits (68), Expect(5) = 2e-080
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 445 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 531
Score = 33.1 bits (66), Expect(5) = 2e-080
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -1
Query: 437 VPVMLRNVTSLTETCE 484
VP+M N SL TCE
Sbjct: 1133 VPLMFLNKISLIATCE 1086
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -3
Query: 526 VLVDDDGVGHLLHPDVLE 579
VL++DD V LH DV +
Sbjct: 1065 VLINDDWVLDTLHDDVFK 1012
>gb|AY065210.1| Arabidopsis thaliana putative polygalacturonase (At1g02790) mRNA,
complete cds
Length = 1561
Score = 167 bits (360), Expect(5) = 2e-080
Identities = 63/134 (47%), Positives = 96/134 (71%)
Frame = -2 / +1
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L ++ N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ +
Sbjct: 574 PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNAD 753
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+SIL+STI TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC
Sbjct: 754 NVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNC 933
Query: 660 VLKNTTNGVRIKSY 619
+ T NG+RIK++
Sbjct: 934 TMIETDNGLRIKTW 975
Score = 114 bits (243), Expect(4) = 2e-032
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -3
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 968 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 789
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 788 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 618
Score = 72.5 bits (152), Expect(5) = 2e-080
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 501 GKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
G R S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1069 GSRGGDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1230
Score = 71.6 bits (150), Expect(5) = 2e-080
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+DI+K GA DG T+ KA + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 223 YDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 387
Score = 49.2 bits (101), Expect(4) = 2e-032
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2 / -3
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
+ + L LHGP K+ GP + PLG ++VA SH +H A V PS AP+L +S
Sbjct: 404 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPSPTAPNLVIS 225
Score = 34.1 bits (68), Expect(5) = 2e-080
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 445 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 531
Score = 33.1 bits (66), Expect(5) = 2e-080
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 997 AVDIKFENIIMQSVKNPIIIDQNY 1068
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -3
Query: 437 VPVMLRNVTSLTETCE 484
VP+M N SL TCE
Sbjct: 1133 VPLMFLNKISLIATCE 1086
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 526 VLVDDDGVGHLLHPDVLE 579
VL++DD V LH DV +
Sbjct: 1065 VLINDDWVLDTLHDDVFK 1012
>emb|X72291.1|ATEXOPA A.thaliana (clone GBGe184) mRNA for exopolygalacturonase
Length = 1477
Score = 167 bits (360), Expect(5) = 2e-080
Identities = 63/134 (47%), Positives = 96/134 (71%)
Frame = -2 / +1
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L ++ N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ +
Sbjct: 562 PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNAD 741
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+SIL+STI TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC
Sbjct: 742 NVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNC 921
Query: 660 VLKNTTNGVRIKSY 619
+ T NG+RIK++
Sbjct: 922 TMIETDNGLRIKTW 963
Score = 114 bits (243), Expect(4) = 2e-032
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -3
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 956 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 777
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 776 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 606
Score = 72.5 bits (152), Expect(5) = 2e-080
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 501 GKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
G R S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1057 GSRGGDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1218
Score = 71.6 bits (150), Expect(5) = 2e-080
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+DI+K GA DG T+ KA + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 211 YDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 375
Score = 49.2 bits (101), Expect(4) = 2e-032
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2 / -3
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
+ + L LHGP K+ GP + PLG ++VA SH +H A V PS AP+L +S
Sbjct: 392 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPSPTAPNLVIS 213
Score = 34.1 bits (68), Expect(5) = 2e-080
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 433 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 519
Score = 33.1 bits (66), Expect(5) = 2e-080
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 985 AVDIKFENIIMQSVKNPIIIDQNY 1056
Score = 22.6 bits (43), Expect(4) = 2e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -3
Query: 437 VPVMLRNVTSLTETCE 484
VP+M N SL TCE
Sbjct: 1121 VPLMFLNKISLIATCE 1074
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 526 VLVDDDGVGHLLHPDVLE 579
VL++DD V LH DV +
Sbjct: 1053 VLINDDWVLDTLHDDVFK 1000
>gb|AY133812.1| Arabidopsis thaliana clone U18487 putative polygalacturonase
(At1g02790) mRNA, complete cds
Length = 1300
Score = 167 bits (360), Expect(5) = 2e-080
Identities = 63/134 (47%), Positives = 96/134 (71%)
Frame = -2 / +1
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L ++ N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ +
Sbjct: 505 PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNAD 684
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+SIL+STI TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC
Sbjct: 685 NVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNC 864
Query: 660 VLKNTTNGVRIKSY 619
+ T NG+RIK++
Sbjct: 865 TMIETDNGLRIKTW 906
Score = 114 bits (243), Expect(4) = 1e-032
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -3
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 899 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 720
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 719 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 549
Score = 72.5 bits (152), Expect(5) = 2e-080
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 501 GKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
G R S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1000 GSRGGDSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1161
Score = 71.6 bits (150), Expect(5) = 2e-080
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+DI+K GA DG T+ KA + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 154 YDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 318
Score = 49.2 bits (101), Expect(4) = 1e-032
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2 / -3
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
+ + L LHGP K+ GP + PLG ++VA SH +H A V PS AP+L +S
Sbjct: 335 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIHVFKNALKVLVEPSPTAPNLVIS 156
Score = 34.1 bits (68), Expect(5) = 2e-080
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 376 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 462
Score = 33.1 bits (66), Expect(5) = 2e-080
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 928 AVDIKFENIIMQSVKNPIIIDQNY 999
Score = 22.6 bits (43), Expect(4) = 1e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -3
Query: 437 VPVMLRNVTSLTETCE 484
VP+M N SL TCE
Sbjct: 1064 VPLMFLNKISLIATCE 1017
Score = 22.1 bits (42), Expect(4) = 1e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 526 VLVDDDGVGHLLHPDVLE 579
VL++DD V LH DV +
Sbjct: 996 VLINDDWVLDTLHDDVFK 943
>ref|NM_111662.2| Arabidopsis thaliana polygalacturonase AT3G07830 mRNA, complete cds
Length = 1460
Score = 212 bits (458), Expect(4) = 2e-080
Identities = 89/187 (47%), Positives = 126/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ V NA + I +++K FHIN+ ++++T +V + APA+ NTD
Sbjct: 446 KTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTD 625
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S +SI+NS I TGDDCVS+G G +LV ++ CGPG GISVG LGRY E+DV
Sbjct: 626 GIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDV 805
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS++ FENI + V+NPI+IDQ +CP C
Sbjct: 806 SGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 985
Query: 504 PGKRSNS 484
++S+S
Sbjct: 986 NKQKSSS 1006
Score = 119 bits (255), Expect(2) = 2e-025
Identities = 70/172 (40%), Positives = 87/172 (50%)
Frame = +2 / -3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL T ++FSK EAV +A L+ PL V Q T+M L
Sbjct: 984 HWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPL 805
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP T+ P P ETQSSPV ++EL M P W P
Sbjct: 804 TSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIP 625
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
SV SAGA+ T VM LM K L + A +T ++ ++G
Sbjct: 624 SVLGLSAGAMILTLSKVMFLAPITLM*KFLASIEDMSLISAFVTKSNLILMG 469
Score = 68.0 bits (142), Expect(4) = 2e-080
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ SS + + +++FR I GTS +A+ LLCS+ PC V + D+N++Y G + +C
Sbjct: 989 KQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMC 1168
Query: 315 SNAKGTAKGS 286
SN + G+
Sbjct: 1169 SNVRPKLVGT 1198
Score = 51.0 bits (105), Expect(4) = 2e-080
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2 / +2
Query: 1353 LGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
L TS +D T+A+ A+T+AC++ VVIPKG + +G + +GPCK
Sbjct: 131 LRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCK 280
Score = 29.0 bits (57), Expect(4) = 2e-080
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++ + G GT DG+G A +
Sbjct: 350 WVVFQRMDGFRLNGGGTFDGEGNAAW 427
Score = 24.0 bits (46), Expect(2) = 2e-025
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 1205 LHGPVKLRGPTR*SPLGITT 1264
LHGP + P+ P GITT
Sbjct: 279 LHGPDIMISPSLNCPFGITT 220
>ref|NM_111663.2| Arabidopsis thaliana polygalacturonase AT3G07840 mRNA, complete cds
Length = 1296
Score = 207 bits (447), Expect(4) = 4e-079
Identities = 86/180 (47%), Positives = 120/180 (66%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ V NA + I +++K FHIN+ ++++T +V V APA+ NTD
Sbjct: 481 KTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTD 660
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+++ CGPG GISVG LGRY E+DV
Sbjct: 661 GIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDV 840
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ ITV NC L+ T NG+RIK++ A TAS + FENI + V+NPI+IDQ +CP C
Sbjct: 841 TGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 1020
Score = 137 bits (293), Expect(3) = 2e-035
Identities = 71/150 (47%), Positives = 84/150 (56%)
Frame = +2 / -2
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL T +MFSK EAV +A + L+ +PL V QF TVM +
Sbjct: 1019 HWFQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSVP*RVQFTTVMPV 840
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP + ST P P E QSSPV ++ELR+L P W P
Sbjct: 839 TSCSCTYLPRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWIP 660
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV SAGA+T T VM MWK L
Sbjct: 659 SVLGLSAGAMTLTLSKVMFLAPRTFMWKFL 570
Score = 67.0 bits (140), Expect(4) = 4e-079
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = -2 / +1
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ S + + D++F+NI GTS +A+ LLCS+ PC+ V + ++N+EY G + +C
Sbjct: 1024 KQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMC 1203
Query: 315 SNAKGTAKGS 286
SN G+
Sbjct: 1204 SNVSPKLVGT 1233
Score = 53.3 bits (110), Expect(4) = 4e-079
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = -2 / +1
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+D T+A+ A+TSAC+A ++ VVI KG++ +G + TGPCK
Sbjct: 190 SDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCK 315
Score = 34.1 bits (68), Expect(3) = 2e-035
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2 / -2
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGPV P+ SP ITT+ A HADV+A +A V S
Sbjct: 314 LHGPVISISPSLNSPFVITTLLAVGAWHADVNAFRSA*VIS 192
Score = 28.6 bits (56), Expect(4) = 4e-079
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +N + G G DG+G A +
Sbjct: 385 WVVFLRINGFKLNGGGIFDGEGNAAW 462
Score = 26.7 bits (52), Expect(3) = 2e-035
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P YS L T HGC + AS DVP++ + S
Sbjct: 1175 PLYSRLMFPISTFAHGCALLHNSFTASLFPDVPLIFLKLMS 1053
>emb|AJ005584.1|ATH005584 Arabidopsis thaliana mRNA for polygalacturonase
Length = 1350
Score = 209 bits (450), Expect(4) = 2e-078
Identities = 83/187 (44%), Positives = 127/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 413 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 592
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S I ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 593 GIHLGRSDGIKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 772
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 773 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 952
Query: 504 PGKRSNS 484
+++++
Sbjct: 953 NKQKAST 973
Score = 131 bits (281), Expect(3) = 3e-032
Identities = 70/150 (46%), Positives = 82/150 (54%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 951 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 772
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+LI P W P
Sbjct: 771 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWIP 592
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 591 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 502
Score = 62.5 bits (130), Expect(4) = 2e-078
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 956 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1135
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1136 SNVSPKILGS 1165
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +2
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 110 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 247
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 246 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 124
Score = 28.1 bits (55), Expect(4) = 2e-078
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 317 WVVFGNIDGFKLNGGGAFDGEGNAAW 394
Score = 22.1 bits (42), Expect(3) = 3e-032
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2 / -1
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVM 448
P Y S T HG QS AS DVP+M
Sbjct: 1107 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1003
>gb|AY065239.1| Arabidopsis thaliana putative polygalacturonase(PGA3 (At3g07820)
mRNA, complete cds
Length = 1401
Score = 208 bits (449), Expect(4) = 2e-078
Identities = 82/187 (43%), Positives = 127/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 455 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 634
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 635 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 814
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 815 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 994
Query: 504 PGKRSNS 484
+++++
Sbjct: 995 NKQKAST 1015
Score = 129 bits (276), Expect(3) = 2e-031
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 993 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 814
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 813 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 634
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 633 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 62.5 bits (130), Expect(4) = 2e-078
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1178 SNVSPKILGS 1207
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +2
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 152 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 289
Score = 33.6 bits (67), Expect(3) = 2e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 288 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
Score = 28.1 bits (55), Expect(4) = 2e-078
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAW 436
Score = 22.1 bits (42), Expect(3) = 2e-031
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2 / -1
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVM 448
P Y S T HG QS AS DVP+M
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
>ref|NM_111661.2| Arabidopsis thaliana polygalacturonase AT3G07820 mRNA, complete cds
Length = 1400
Score = 208 bits (449), Expect(4) = 2e-078
Identities = 82/187 (43%), Positives = 127/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 455 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 634
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 635 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 814
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 815 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 994
Query: 504 PGKRSNS 484
+++++
Sbjct: 995 NKQKAST 1015
Score = 129 bits (276), Expect(3) = 2e-031
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / -3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 993 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 814
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 813 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 634
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 633 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 62.5 bits (130), Expect(4) = 2e-078
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1178 SNVSPKILGS 1207
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +2
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 152 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 289
Score = 33.6 bits (67), Expect(3) = 2e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -3
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 288 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
Score = 28.1 bits (55), Expect(4) = 2e-078
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAW 436
Score = 22.1 bits (42), Expect(3) = 2e-031
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2 / -3
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVM 448
P Y S T HG QS AS DVP+M
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
>gb|AY087578.1| Arabidopsis thaliana clone 36765 mRNA, complete sequence
Length = 1385
Score = 208 bits (449), Expect(4) = 2e-078
Identities = 82/187 (43%), Positives = 127/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 455 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 634
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 635 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 814
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 815 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 994
Query: 504 PGKRSNS 484
+++++
Sbjct: 995 NKQKAST 1015
Score = 129 bits (276), Expect(3) = 2e-031
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / -3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 993 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 814
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 813 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 634
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 633 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 544
Score = 62.5 bits (130), Expect(4) = 2e-078
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 998 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1177
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1178 SNVSPKILGS 1207
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +2
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 152 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 289
Score = 33.6 bits (67), Expect(3) = 2e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -3
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 288 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 166
Score = 28.1 bits (55), Expect(4) = 2e-078
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 359 WVVFGNIDGFKLNGGGAFDGEGNAAW 436
Score = 22.1 bits (42), Expect(3) = 2e-031
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2 / -3
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVM 448
P Y S T HG QS AS DVP+M
Sbjct: 1149 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 1045
>emb|BX823174.1|CNS0A74O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1329
Score = 208 bits (449), Expect(4) = 2e-078
Identities = 82/187 (43%), Positives = 127/187 (67%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 440 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 619
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 620 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 799
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 800 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 979
Query: 504 PGKRSNS 484
+++++
Sbjct: 980 NKQKAST 1000
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 978 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 799
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 798 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 619
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 618 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 529
Score = 60.2 bits (125), Expect(4) = 2e-078
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GT +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 983 KQKASTIKLVNISFKNIRGTPGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1162
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1163 SNVSPKILGS 1192
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +2
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 137 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 274
Score = 33.6 bits (67), Expect(2) = 3e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 273 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 151
Score = 30.4 bits (60), Expect(4) = 2e-078
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 344 WVVFGNINGFKLNGGGAFDGEGNAAW 421
>gb|AY096534.1| Arabidopsis thaliana putative polygalacturonase (PGA3) (At3g07820)
mRNA, complete cds
Length = 1207
Score = 208 bits (449), Expect(4) = 2e-078
Identities = 82/187 (43%), Positives = 127/187 (67%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ ++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTD
Sbjct: 388 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 567
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S + ILNS I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DV
Sbjct: 568 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 747
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC L+ T NG+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 748 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 927
Query: 504 PGKRSNS 484
+++++
Sbjct: 928 NKQKAST 948
Score = 129 bits (276), Expect(3) = 1e-031
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / -3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 926 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 747
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 746 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 567
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 566 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 477
Score = 62.5 bits (130), Expect(4) = 2e-078
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +1
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ +S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + C
Sbjct: 931 KQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHC 1110
Query: 315 SNAKGTAKGS 286
SN GS
Sbjct: 1111 SNVSPKILGS 1140
Score = 54.7 bits (113), Expect(4) = 2e-078
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -2 / +1
Query: 1341 SDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
S +D T+A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 85 SSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 222
Score = 33.6 bits (67), Expect(3) = 1e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / -3
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQS 1327
LHGP+ P+ SP GITT+ HADV+A +A V S
Sbjct: 221 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSA*VIS 99
Score = 28.1 bits (55), Expect(4) = 2e-078
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 292 WVVFGNIDGFKLNGGGAFDGEGNAAW 369
Score = 22.1 bits (42), Expect(3) = 1e-031
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2 / -3
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVM 448
P Y S T HG QS AS DVP+M
Sbjct: 1082 PLYLISMSPISTFWHGYPLLQSSFTASLFPDVPLM 978
>ref|NM_127105.1| Arabidopsis thaliana polygalacturonase AT2G15450 mRNA, complete cds
Length = 1215
Score = 232 bits (502), Expect(4) = 3e-076
Identities = 94/231 (40%), Positives = 139/231 (60%)
Frame = -2 / +1
Query: 1035 NVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVH 856
N + T+ V N+ + I LNSK H N + + V +TAP D NTDG+
Sbjct: 436 NCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIK 615
Query: 855 VGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDI 676
+G S I I ++ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV D+
Sbjct: 616 MGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDL 795
Query: 675 TVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
VR+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C +
Sbjct: 796 IVRDVIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHE 975
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
R SHV ++++ +NI GTS A++L CS+ PC V LID+N++ G
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 100 bits (213), Expect(3) = 3e-027
Identities = 54/129 (41%), Positives = 71/129 (55%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L T+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQFLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGPQ+ L + P I QSSPVPM + +L P PSV
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 45.5 bits (93), Expect(3) = 3e-027
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S M + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYLKLIHVSCLMSLGFAGANKVPSMMNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(4) = 3e-076
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(4) = 3e-076
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 34.5 bits (69), Expect(4) = 3e-076
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
F++ + GA DGKTD A W+ AC+ ++ +
Sbjct: 91 FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKI 201
Score = 24.0 bits (46), Expect(3) = 3e-027
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2 / -2
Query: 359 LTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNV 460
L S+ T LHG + R A+ DVP M N+
Sbjct: 1112 LMSISSTFLHGKILLHCRFTATLFFDVPYMFFNL 1011
>ref|NM_127106.1| Arabidopsis thaliana polygalacturonase AT2G15460 mRNA, complete cds
Length = 1209
Score = 232 bits (502), Expect(4) = 3e-076
Identities = 94/231 (40%), Positives = 139/231 (60%)
Frame = -2 / +1
Query: 1035 NVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVH 856
N + T+ V N+ + I LNSK H N + + V +TAP D NTDG+
Sbjct: 436 NCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIK 615
Query: 855 VGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDI 676
+G S I I ++ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV D+
Sbjct: 616 MGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDL 795
Query: 675 TVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
VR+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C +
Sbjct: 796 IVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHE 975
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
R SHV ++++ +NI GTS A++L CS+ PC V LID+N++ G
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 100 bits (213), Expect(3) = 3e-027
Identities = 54/129 (41%), Positives = 71/129 (55%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L T+ S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGPQ+ L + P I QSSPVPM + +L P PSV
Sbjct: 773 SLLFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 45.5 bits (93), Expect(3) = 3e-027
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S M + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYLKLIHVSCLMSLGFAGANKVPSMMNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(4) = 3e-076
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(4) = 3e-076
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 34.5 bits (69), Expect(4) = 3e-076
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
F++ + GA DGKTD A W+ AC+ ++ +
Sbjct: 91 FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKI 201
Score = 24.0 bits (46), Expect(3) = 3e-027
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2 / -2
Query: 359 LTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNV 460
L S+ T LHG + R A+ DVP M N+
Sbjct: 1112 LMSISSTFLHGKILLHCRFTATLFFDVPYMFFNL 1011
>emb|BX822574.1|CNS0A73L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB4ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1339
Score = 209 bits (450), Expect(4) = 7e-076
Identities = 88/187 (47%), Positives = 125/187 (66%)
Frame = -2 / +3
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
KT K +P ++ V NA + I +++K FHIN+ ++++T +V + APA+ NTD
Sbjct: 456 KTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTD 635
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+H+G S +SI+NS I TGDDCVS+G G +LV ++ CGPG GISVG LGRY E+DV
Sbjct: 636 GIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDV 815
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
S I V NC + T NG+RIK++ A TAS++ FENI + V+NPI+IDQ +CP C
Sbjct: 816 SGIRVINCTPQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 995
Query: 504 PGKRSNS 484
++S+S
Sbjct: 996 YKQKSSS 1016
Score = 120 bits (256), Expect(2) = 1e-025
Identities = 70/172 (40%), Positives = 87/172 (50%)
Frame = +2 / -1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL T ++FSK EAV +A L+ PL V Q T+M L
Sbjct: 994 HWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWGVQLMTLMPL 815
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP T+ P P ETQSSPV ++EL M P W P
Sbjct: 814 TSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIP 635
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLG 1021
SV SAGA+ T VM LM K L + A +T ++ ++G
Sbjct: 634 SVLGLSAGAMILTLSKVMFLAPITLM*KFLASIEDMSLISAFVTKSNLILMG 479
Score = 56.5 bits (117), Expect(4) = 7e-076
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -2 / +3
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVC 316
+ SS + + D+ FR I GTS +A+ LLC + PC V + D+N++ G + +
Sbjct: 999 KQKSSSIKLADICFRRIRGTSGKKDAVKLLCGKGYPCENVQVGDINIQ*IGADGPATFMW 1178
Query: 315 SNAKGTAKGS 286
SN + G+
Sbjct: 1179 SNVRPKLVGT 1208
Score = 51.0 bits (105), Expect(4) = 7e-076
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2 / +3
Query: 1353 LGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
L TS +D T+A+ A+T+AC++ VVIPKG + +G + +GPCK
Sbjct: 141 LRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCK 290
Score = 29.0 bits (57), Expect(4) = 7e-076
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / +3
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++ + G GT DG+G A +
Sbjct: 360 WVVFQRMDGFRLNGGGTFDGEGNAAW 437
Score = 24.0 bits (46), Expect(2) = 1e-025
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITT 1264
LHGP + P+ P GITT
Sbjct: 289 LHGPDIMISPSLNCPFGITT 230
>ref|NM_117450.1| Arabidopsis thaliana polygalacturonase AT4G13760 mRNA, complete cds
Length = 1128
Score = 232 bits (500), Expect(4) = 7e-076
Identities = 93/234 (39%), Positives = 140/234 (59%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TAP + NTD
Sbjct: 340 KNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTD 519
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV
Sbjct: 520 GIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDV 699
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
D+T+R+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 700 KDLTIRDVIFNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPC 879
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
++ SHV ++++ +NI GTS A++L CS+ PC + LID+N+ G
Sbjct: 880 EHEQKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG 1041
Score = 99.1 bits (210), Expect(2) = 2e-022
Identities = 54/129 (41%), Positives = 70/129 (54%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L V S TSFS
Sbjct: 866 GQYF*SMLIGFPTSII*IFSYKKFETRIFEAEDSQVLIRIPSLVPLKITSLIVKSFTSFS 687
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGPQ+ L + P + QSSPVPM L M +L P PSV
Sbjct: 686 SLFFPKLPTLIPCPGPQLTLEISRLVVPESMAIQSSPVPMFVLEM*MLLHEPILIPSVLG 507
Query: 878 TSAGAVTFT 904
GAV T
Sbjct: 506 LLPGAVIVT 480
Score = 41.4 bits (84), Expect(4) = 7e-076
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI+ ++N++ I+GSGTLDGQG
Sbjct: 241 TWIKFKYINDLSISGSGTLDGQG 309
Score = 36.8 bits (74), Expect(4) = 7e-076
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 97 SGSSKIYVPKGTFYLGGVEFVGPCK 171
Score = 35.4 bits (71), Expect(4) = 7e-076
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
F++ + G+ SDGKTD T W AC ++ +
Sbjct: 4 FNVQRHGSKSDGKTDNTNVFTSVWNRACRRKSGSSKI 114
Score = 34.1 bits (68), Expect(2) = 2e-022
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
P PSSVPEP I L N I ++ + F + S + LHGP P
Sbjct: 308 PCPSSVPEPEIERSLMYLNLIHVSCLMLLGFAGANKVPSMRNSIGFLHGPTNSTPPR*NV 129
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 128 PFGT*ILLLPL 96
>emb|BX819999.1|CNS0AA2M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS59ZH05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1532
Score = 270 bits (585), Expect(2) = 2e-075
Identities = 106/255 (41%), Positives = 161/255 (63%)
Frame = -2 / +2
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+K N + + + V ++ + G++ +NSK H N+ + E + V +T P D NT
Sbjct: 449 NKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFDITGVTITTPGDSPNT 628
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+ +G SS + I N TIGTGDDC++I G + + + + CGPG GISVG LGRYK+EK+
Sbjct: 629 DGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKN 808
Query: 687 VSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKV 508
V +TVRN ++ TT+G+RIK++ + S ++ S+ +ENI+M V NPIVIDQ +CP
Sbjct: 809 VQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQ 988
Query: 507 CPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKT 328
C +SHV +KDV + NI GTS++ EA+ + CS+T PC V L ++N+ Y G++
Sbjct: 989 CDSPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLV 1168
Query: 327 MAVCSNAKGTAKGSI 283
A+C N G+ +G I
Sbjct: 1169 TALCENVGGSIRGKI 1213
Score = 115 bits (245), Expect = 5e-024
Identities = 83/234 (35%), Positives = 104/234 (44%)
Frame = +2 / -3
Query: 275 SASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLR 454
+ ++LP P A+ P L T G V AS + +VP +L
Sbjct: 1221 AGTILPRIEPPTFSHKAVTKPSRPT*CKLIFESSTS*QGNVLLHCIFKASLLVEVPQILL 1042
Query: 455 NVTSLTETCEELLRLPGHTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMR 634
+TS T E H CGQ SMT+G T I MFS ++E D+ + L+R
Sbjct: 1041 YLTSFI*T*EAYFPGLSHCPCGQYC*SMTIGFPTLIIWMFSYKKFETEICDTDLAHVLIR 862
Query: 635 TPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVP 814
P VV L +F TV T FSSL PR PTL+PCPGP + L P I QSSPVP
Sbjct: 861 KPSVVPLIIEFLTVKPWTFFSSLYLPRLPTLIPCPGPHLTSEISKLLVPSRIAIQSSPVP 682
Query: 815 MVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
+V L + I + P PSV S G V T S + L L L L P
Sbjct: 681 IVTL*ICIWLDFPILIPSVLGLSPGVVMVTPVMSKSSTENKLKCPILLLMDLRP 520
Score = 35.9 bits (72), Expect(2) = 2e-075
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGT 1063
WI +V+N+ +TG G LDGQG+
Sbjct: 356 WILFKYVDNLTVTGGGLLDGQGS 424
>ref|NM_129589.1| Arabidopsis thaliana polygalacturonase AT2G40310 mRNA, complete cds
Length = 1215
Score = 231 bits (499), Expect(4) = 2e-075
Identities = 94/239 (39%), Positives = 143/239 (59%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TA D NTD
Sbjct: 427 KNLNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITASGDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S + I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNMHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
++TVR+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KNLTVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKT 328
++ SHV ++D+ +NI GTS A++L CS++ PC + LID+N++ G N +
Sbjct: 967 EHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSS 1143
Score = 97.7 bits (207), Expect(3) = 5e-025
Identities = 53/129 (41%), Positives = 69/129 (53%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L TV TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTVKFFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP + L + P + QSSPVPM L M +L P PSV
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVLEMCMLLHEPILIPSVLG 594
Query: 878 TSAGAVTFT 904
S AV T
Sbjct: 593 LSPEAVIVT 567
Score = 42.8 bits (87), Expect(3) = 5e-025
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYLKLIHVSCLISLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NI 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(4) = 2e-075
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 35.9 bits (72), Expect(4) = 2e-075
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGIFYLGGVEFVGPCK 258
Score = 33.6 bits (67), Expect(4) = 2e-075
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
TF++ + G+ DGKTD W+ AC+ ++ +
Sbjct: 88 TFNVQRHGSKPDGKTDNANVFTSIWSRACKRKSGSSKI 201
Score = 22.1 bits (42), Expect(3) = 5e-025
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P L S+ LHG + R +A+ DVP M N+ S
Sbjct: 1127 PLLFMLMSISSIFLHGKLLLH*RFIATLFFDVPYMFFNLRS 1005
>ref|NM_101576.1| Arabidopsis thaliana polygalacturonase AT1G17150 mRNA, complete cds
Length = 1209
Score = 169 bits (364), Expect(4) = 3e-075
Identities = 72/180 (40%), Positives = 110/180 (61%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K +N + + V N+++ GI LNSK H N + + ++ VN+ AP++ NTD
Sbjct: 430 KDNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTD 609
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ + SS + I N+ I TGDDC+++ G + ++ CGPG GIS+G LG+ KDEK+V
Sbjct: 610 GIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNV 789
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ + VRN V TTNG+RIK++ + S + +L +EN++M V NPI IDQ +CP C
Sbjct: 790 NGLMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPC 969
Score = 95.0 bits (201), Expect(2) = 6e-032
Identities = 56/160 (35%), Positives = 79/160 (49%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G +T I FS + ++ ++ L+R PLVV + T+F T+ LT FS
Sbjct: 956 GQYF*SMPIGFSTFIICRFSYTKLIIRIVEAEDSHVLIRIPLVVPVKTEFLTIKPLTFFS 777
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ P L+PCPGP + L + P I QSSPV M + +L + PSV
Sbjct: 776 SLFFPKLPILIPCPGPHLTL*ISKFVFPESIAIQSSPVLM*VFEICMLLDKAILIPSVLG 597
Query: 878 TSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT 997
GA+ T + S L L LS +IP + T
Sbjct: 596 LLLGAIMLTLVMLKWSTDKKLKCPALLLSDVIPFMLEFFT 477
Score = 74.8 bits (157), Expect(4) = 3e-075
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = -2 / +1
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTM 325
P SH+ +++VT +NI GTS A+ CS+T PC V LID+N+ + G +
Sbjct: 964 PCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPAS 1143
Query: 324 AVCSNAKGTAKGSI 283
A+C N G+A G +
Sbjct: 1144 ALCENVDGSATGKM 1185
Score = 66.1 bits (138), Expect(2) = 6e-032
Identities = 37/101 (36%), Positives = 47/101 (46%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPS VP P L * I ++ +S F + S +LP HGP + P
Sbjct: 398 PWPSRVPSPKTVR*LM*RKFIHISFLMSSLFGGANKVPSMTNEILPSHGPTNVTPPR*NV 219
Query: 1247 PLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMSN 1369
P G+ + P HA HA A V S+LPS +AP L SN
Sbjct: 218 PSGMYILLGPFHLHASFHAFVNALVLSILPSPLAP*LRTSN 96
Score = 63.8 bits (133), Expect(4) = 3e-075
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKG 1201
FD+ GA DGK D T A +AW AC G + + IP G + +G + F GPC G
Sbjct: 97 FDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDG 264
Score = 35.0 bits (70), Expect(4) = 3e-075
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYS 1051
WI ++N + + G GTLDGQG +S
Sbjct: 334 WINFRYINYLTVFGDGTLDGQGKKSWS 414
>ref|NM_127107.2| Arabidopsis thaliana polygalacturonase AT2G15470 mRNA, complete cds
Length = 1215
Score = 230 bits (496), Expect(4) = 4e-074
Identities = 93/231 (40%), Positives = 138/231 (59%)
Frame = -2 / +1
Query: 1035 NVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVH 856
N + T+ V N+ + I LNSK H N + + V +TAP D NTDG+
Sbjct: 436 NCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIK 615
Query: 855 VGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDI 676
+G S I I ++ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKD D+
Sbjct: 616 MGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDL 795
Query: 675 TVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGK 496
VR+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C +
Sbjct: 796 IVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHE 975
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
R SHV ++++ +NI GTS A++L CS+ PC V LID+N++ G
Sbjct: 976 RKGESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG 1128
Score = 98.2 bits (208), Expect(3) = 1e-025
Identities = 53/129 (41%), Positives = 70/129 (54%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L T+ S SFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEAEDSQVLIRIPSLVPLKMTSLTIKSFASFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGPQ+ L + P I QSSPVPM + +L P PSV
Sbjct: 773 SLFFPKLPTLIPCPGPQLTLEILRLVVPERIAIQSSPVPMFVSEI*MLLHEPILIPSVLG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 42.8 bits (87), Expect(4) = 4e-074
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 41.8 bits (85), Expect(3) = 1e-025
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S M + LH P P
Sbjct: 395 PWPSSVPEPEIERLLMYLKLIHVSCLMSLGFAGANKVPSMMNSIGFLHRPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 34.5 bits (69), Expect(4) = 4e-074
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
F++ + GA DGKTD A W+ AC+ ++ +
Sbjct: 91 FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKI 201
Score = 32.2 bits (64), Expect(4) = 4e-074
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F G CK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGLCK 258
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2 / -2
Query: 359 LTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNV 460
L S+ T LHG + R +A+ DVP M N+
Sbjct: 1112 LMSISSTFLHGKILLHCRFIATLFFDVPYMFFNL 1011
>ref|NM_128219.1| Arabidopsis thaliana polygalacturonase AT2G26620 mRNA, complete cds
Length = 1209
Score = 181 bits (389), Expect(5) = 9e-074
Identities = 76/186 (40%), Positives = 110/186 (59%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + ++ V N+ + I LNSK H N + V +TAP+D NTD
Sbjct: 427 KNPNCPKLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + +I CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
D+ VR+ + T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KDLFVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSN 487
+R +
Sbjct: 967 EHERKS 984
Score = 103 bits (220), Expect(2) = 9e-027
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++E ++ + L+R P +V L T S TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYTKFETRIFEADDSQVLIRIPSLVPLKMTSLTNKSFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGPQ+ML + + P I QSSPVPM L + +L P PSV
Sbjct: 773 SLFFPKLPTLIPCPGPQLMLEILSLVVPERIAIQSSPVPMFVLEI*MLLHEPILIPSVLG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSLGAVIVT 567
Score = 60.2 bits (125), Expect(5) = 9e-074
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = -2 / +1
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
P + SHV ++D+ +NI GTS A++L CS++ PC V LID+N++ G
Sbjct: 961 PCEHERKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG 1122
Score = 44.1 bits (90), Expect(2) = 9e-027
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S M + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYLKLIHVSCLMSLGFAGANNVPSIMNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(5) = 9e-074
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(5) = 9e-074
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 35.4 bits (71), Expect(5) = 9e-074
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
F++ + G+ DGKTD T A W+ AC+ ++ +
Sbjct: 91 FNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKI 201
>ref|NM_103464.1| Arabidopsis thaliana polygalacturonase AT1G43090 mRNA, complete cds
Length = 1335
Score = 239 bits (517), Expect(3) = 1e-073
Identities = 98/234 (41%), Positives = 143/234 (61%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TAP D NTD
Sbjct: 427 KNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+TVR+ V T++G+RIK++ + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
++ SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 967 EHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 107 bits (229), Expect(3) = 2e-029
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E S ++ + L+R P +V L T TV TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP + L + P + QSSPVPM M +L + P PSVF
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 43.7 bits (89), Expect(3) = 2e-029
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(3) = 1e-073
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(3) = 1e-073
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 26.7 bits (52), Expect(3) = 2e-029
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P L S+ T LHG + R A+ + DVP M N+ S
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMS 1005
>ref|NM_106487.2| Arabidopsis thaliana polygalacturonase AT1G78400 mRNA, complete cds
Length = 1215
Score = 167 bits (360), Expect(4) = 2e-073
Identities = 70/180 (38%), Positives = 107/180 (59%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
+T N +A+P + V + + IK +NSK H+N + + + VN+ AP D NTD
Sbjct: 436 QTHNCRALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTD 615
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S+ + I + I TGDDC++I G + ++ + CGPG GISVG LG++K EK V
Sbjct: 616 GIKIGSSNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSV 795
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ VRN + T+NGVRIK++ S+ F+N++M +V +PI IDQ +CP C
Sbjct: 796 QGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 975
Score = 91.3 bits (193), Expect(3) = 9e-025
Identities = 59/164 (35%), Positives = 77/164 (46%)
Frame = +2 / -2
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H GQ SM +GL TS I F K ++E + L+RTPL+V L +F T+
Sbjct: 974 HGGFGQYR*SMLIGLWTSIIWRFLKRKFETKFGSPGEGHVLIRTPLLVPLKIEFLTINP* 795
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T FS L PR PTL+P PGPQ+ L P I QSSPV M + + + P P
Sbjct: 794 TLFSPLNFPRLPTLIPWPGPQLTLLISKLKVPDKIAMQSSPVAMSTWWIFMWFDEPILIP 615
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT 997
SV S GA+ T L W L L L+ ++ +T
Sbjct: 614 SVLGLSPGALMLTRVISKCWTEKKLRWPILLLIDLMRVSLENLT 483
Score = 70.7 bits (148), Expect(4) = 2e-073
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + ++DV F+NI GTS+ EA+ L CS+ PC V L ++N+ + G++ +VC N
Sbjct: 991 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 1170
Query: 303 GTAKGSI 283
G G I
Sbjct: 1171 GWIGGKI 1191
Score = 67.0 bits (140), Expect(4) = 2e-073
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
FD+ GA DGKTD T A AW AC+ G V IP G + +G + FTGPCK
Sbjct: 103 FDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCK 267
Score = 46.0 bits (94), Expect(3) = 9e-025
Identities = 27/60 (45%), Positives = 30/60 (50%)
Frame = +2 / -2
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVLPSLVAPSLEMS 1366
M ++ LHGPVK P P GI T+ P A HA A V SVLPS AP L S
Sbjct: 284 MKLIRLLHGPVKATAPR*KVPNGIYTLGNPFHWQASFHAFVNAIVLSVLPSPRAP*LRTS 105
Score = 31.8 bits (63), Expect(4) = 2e-073
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
SWI +V+ + ++G G LDGQG+
Sbjct: 337 SWIIFRYVDYLTVSGGGILDGQGS 408
Score = 24.4 bits (47), Expect(3) = 9e-025
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +2 / -2
Query: 263 RQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDVP 442
R +LP P T + LP + L T L G AS DVP
Sbjct: 1211 RMQDGGEILPPIQPPTFSHTEVAGPSLPRCTMLMLKS*TFLQGTFLLHCNFTASLAVDVP 1032
Query: 443 VMLRNVTSL 469
M N TSL
Sbjct: 1031 QMFWNFTSL 1005
>gb|DQ056483.1| Arabidopsis thaliana glycoside hydrolase family 28 protein
(At1g43080) mRNA, complete cds
Length = 1215
Score = 239 bits (516), Expect(3) = 2e-073
Identities = 98/234 (41%), Positives = 143/234 (61%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TAP D NTD
Sbjct: 427 KNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + +I CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+TVR+ V T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KHLTVRDTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
++ SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 967 EHEKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 107 bits (229), Expect(3) = 1e-029
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E ++ + L+R P +V L T TV TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP +ML + P + QSSPVPM M +L + P PSVF
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 43.7 bits (89), Expect(3) = 1e-029
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(3) = 2e-073
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(3) = 2e-073
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 26.7 bits (52), Expect(3) = 1e-029
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P L S+ T LHG + R A+ + DVP M N+ S
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMS 1005
>ref|NM_103463.1| Arabidopsis thaliana polygalacturonase AT1G43080 mRNA, complete cds
Length = 1215
Score = 239 bits (516), Expect(3) = 2e-073
Identities = 98/234 (41%), Positives = 143/234 (61%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TAP D NTD
Sbjct: 427 KNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + +I CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+TVR+ V T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KHLTVRDTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
++ SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 967 EHEKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 107 bits (229), Expect(3) = 1e-029
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E ++ + L+R P +V L T TV TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP +ML + P + QSSPVPM M +L + P PSVF
Sbjct: 773 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 43.7 bits (89), Expect(3) = 1e-029
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 395 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NV 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 42.8 bits (87), Expect(3) = 2e-073
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 36.8 bits (74), Expect(3) = 2e-073
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 184 SGSSKIYVPKGTFYLGGVEFVGPCK 258
Score = 26.7 bits (52), Expect(3) = 1e-029
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P L S+ T LHG + R A+ + DVP M N+ S
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMS 1005
>ref|NM_117928.1| Arabidopsis thaliana polygalacturonase AT4G18180 mRNA, complete cds
Length = 1245
Score = 202 bits (435), Expect(5) = 3e-072
Identities = 82/177 (46%), Positives = 113/177 (63%)
Frame = -2 / +1
Query: 1035 NVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVH 856
N K +P +L + V I +NSKFFHI + +N+TAP+D NTDG+H
Sbjct: 445 NCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIH 624
Query: 855 VGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDI 676
+ SS + S I TGDDCVSIG G + + + SI CGPG GISVG LGRY +EKDV+ +
Sbjct: 625 IERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGL 804
Query: 675 TVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
V++C + TTNG+RIK++ ++ + A+++TFENI M V NPI+IDQ +CP C
Sbjct: 805 VVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSC 975
Score = 98.2 bits (208), Expect(3) = 3e-022
Identities = 62/168 (36%), Positives = 80/168 (47%)
Frame = +2 / -2
Query: 533 SMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFSSL*RP 712
SM +GL T I++FSKV A L+ P VV L Q T LTSFS P
Sbjct: 947 SMMIGLVTLFIIIFSKVMLVAALRPGELAQVLILIPFVVPLILQSFTTSPLTSFSFGYLP 768
Query: 713 RQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFSTSAGA 892
+ PTL+PCPGP ++L P PIETQSSPV + E E PSVF S GA
Sbjct: 767 KLPTLIPCPGPHLILVIVI*EFPCPIETQSSPVAICEREKYTFELRSICIPSVFGLSEGA 588
Query: 893 VTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT*NSTSVLGIAFTL 1036
V + + + + KNL + LI T L + ++G + L
Sbjct: 587 VMLSLVPLKSLHSTNAI*KNLLFTELILLTTVLFIPTNFKLVGRSLQL 444
Score = 43.7 bits (89), Expect(5) = 3e-072
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKN 337
S V + ++ F+NI GTSS+ A+ L CS PC V L +V+++ + +
Sbjct: 991 SKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSD 1137
Score = 36.8 bits (74), Expect(5) = 3e-072
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2 / +1
Query: 1281 ATGSATVVIPKGDYLVGPLNFTGPC 1207
++ S ++IP+G++ VG L F+GPC
Sbjct: 193 SSSSVNLIIPRGEFSVGSLRFSGPC 267
Score = 35.9 bits (72), Expect(5) = 3e-072
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
WI+ +N + +TG GT DGQG +
Sbjct: 340 WIQFGWINGLTLTGGGTFDGQGALAW 417
Score = 32.7 bits (65), Expect(5) = 3e-072
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2 / +1
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVI 1255
D+ GA ++ D TKA AW AC+++ S+ +I
Sbjct: 106 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLI 216
Score = 28.1 bits (55), Expect(3) = 3e-022
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -2
Query: 362 TSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTSLTETCE 484
T + T LHG Q A+ DDVP++ SL+ T E
Sbjct: 1112 TFSKYTFLHGIPLLQCSCTATSEDDVPLIFLKYISLSSTFE 990
Score = 26.7 bits (52), Expect(3) = 3e-022
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / -2
Query: 1205 LHGPVKLRGPTR*SPLGI 1258
+ GP LR PT SPLGI
Sbjct: 269 VQGPENLREPTENSPLGI 216
>emb|X73222.1|ATEGP A.thaliana mRNA for exopolygalacturonase
Length = 1617
Score = 170 bits (366), Expect(5) = 4e-072
Identities = 64/143 (44%), Positives = 100/143 (69%)
Frame = -2 / +2
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+++ AP + NT
Sbjct: 599 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDISIDAPPESLNT 778
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 779 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 958
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 959 VKGVTVRKCLIKNTDNGVRIKTW 1027
Score = 98.7 bits (209), Expect(5) = 5e-029
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1020 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 841
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 840 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASILISVRVMFLQLRMFMWKSL 691
Score = 72.1 bits (151), Expect(5) = 4e-072
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT +NI GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1154 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1333
Query: 303 GTAKGSI 283
G +
Sbjct: 1334 PILSGKL 1354
Score = 42.3 bits (86), Expect(5) = 4e-072
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+YLV L F GPCKG
Sbjct: 362 STITVPKGEYLVESLEFKGPCKG 430
Score = 39.6 bits (80), Expect(5) = 4e-072
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1049 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1138
Score = 38.6 bits (78), Expect(5) = 4e-072
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
+ D+ GA DGKTD + A AW AC A + TV
Sbjct: 266 SLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 376
Score = 32.2 bits (64), Expect(5) = 5e-029
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1138 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDTGG 1037
Score = 29.0 bits (57), Expect(5) = 5e-029
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVLPS +AP
Sbjct: 375 TVIVLPAAQASFHAAANAALSSVLPSPLAP 286
Score = 28.6 bits (56), Expect(5) = 5e-029
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1377 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1198
Query: 440 PVMLRNVTS 466
P+M VTS
Sbjct: 1197 PLMFLIVTS 1171
Score = 27.2 bits (53), Expect(5) = 5e-029
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T+ SP G V
Sbjct: 429 PLHGPLNSRLSTKYSPFGTVIV 364
>ref|NM_103465.1| Arabidopsis thaliana polygalacturonase AT1G43100 mRNA, complete cds
Length = 1335
Score = 239 bits (517), Expect(3) = 5e-072
Identities = 98/234 (41%), Positives = 143/234 (61%)
Frame = -2 / +1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
K N + T+ V N+ + I LNSK H N + + V +TAP D NTD
Sbjct: 427 KNTNCPELAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTD 606
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S I I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV
Sbjct: 607 GIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDV 786
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+TVR+ V T++G+RIK++ + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 787 KHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 966
Query: 504 PGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
++ SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 967 EHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 1128
Score = 107 bits (229), Expect(3) = 1e-028
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E S ++ + L+R P +V L T TV TSFS
Sbjct: 953 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 774
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP + L + P + QSSPVPM M +L + P PSVF
Sbjct: 773 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 594
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 593 LSPGAVIVT 567
Score = 42.8 bits (87), Expect(3) = 5e-072
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 328 TWINFRYINNLSISGSGTLDGQG 396
Score = 40.9 bits (83), Expect(3) = 1e-028
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = +2 / -2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + L+GP P
Sbjct: 395 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLYGPTNSTPPR*NF 216
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 215 PFGT*ILLLPL 183
Score = 31.8 bits (63), Expect(3) = 5e-072
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2 / +1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GP K
Sbjct: 184 SGSSKIYVPKGKFYLGGVEFVGPYK 258
Score = 26.7 bits (52), Expect(3) = 1e-028
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2 / -2
Query: 344 PAYSTLTSMRETPLHGCVSEQSRLMASGVDDVPVMLRNVTS 466
P L S+ T LHG + R A+ + DVP M N+ S
Sbjct: 1127 PVCFRLISISSTFLHGKLLLHCRFTATMLFDVPYMFFNLMS 1005
>ref|NM_112258.2| Arabidopsis thaliana polygalacturonase AT3G14040 mRNA, complete cds
Length = 1668
Score = 170 bits (365), Expect(5) = 6e-072
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +1
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 631 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNT 810
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 811 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 990
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 991 VKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 96.8 bits (205), Expect(5) = 2e-028
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -2
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1052 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 873
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 872 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 72.1 bits (151), Expect(5) = 6e-072
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT +NI GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1186 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1365
Query: 303 GTAKGSI 283
G +
Sbjct: 1366 PILSGKL 1386
Score = 42.3 bits (86), Expect(5) = 6e-072
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+YLV L F GPCKG
Sbjct: 394 STITVPKGEYLVESLEFKGPCKG 462
Score = 39.6 bits (80), Expect(5) = 6e-072
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1170
Score = 38.6 bits (78), Expect(5) = 6e-072
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
+ D+ GA DGKTD + A AW AC A + TV
Sbjct: 298 SLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 408
Score = 32.2 bits (64), Expect(5) = 2e-028
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -1
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1170 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDTGG 1069
Score = 29.0 bits (57), Expect(5) = 2e-028
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / -2
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVLPS +AP
Sbjct: 407 TVIVLPAAQASFHAAANAALSSVLPSPLAP 318
Score = 28.6 bits (56), Expect(5) = 2e-028
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2 / -2
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1409 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1230
Query: 440 PVMLRNVTS 466
P+M VTS
Sbjct: 1229 PLMFLIVTS 1203
Score = 27.2 bits (53), Expect(5) = 2e-028
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / -2
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T+ SP G V
Sbjct: 461 PLHGPLNSRLSTKYSPFGTVIV 396
>emb|AJ003135.1|ATAJ3135 Arabidopsis thaliana PGA5 gene, complete CDS
Length = 2556
Score = 202 bits (436), Expect(4) = 9e-072
Identities = 79/164 (48%), Positives = 115/164 (70%)
Frame = -2 / +3
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTDG+H+G S I ILNS
Sbjct: 1566 ILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGIKILNSF 1745
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DVS I V NC L+ T NG
Sbjct: 1746 ISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNG 1925
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 1926 LRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 2057
Score = 131 bits (281), Expect(2) = 1e-032
Identities = 70/150 (46%), Positives = 82/150 (54%)
Frame = +2 / -3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 2056 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 1877
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+LI P W P
Sbjct: 1876 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILIPSLLPKWIP 1697
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 1696 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 1607
Score = 61.6 bits (128), Expect(4) = 9e-072
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = -2 / +1
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 307
+S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + CSN
Sbjct: 2155 ASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 2334
Query: 306 KGTAKGS 286
GS
Sbjct: 2335 SPKILGS 2355
Score = 51.9 bits (107), Expect(4) = 9e-072
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = -2 / +2
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
TD +A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 1151 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 1276
Score = 37.3 bits (75), Expect(2) = 1e-032
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2 / -1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSV 1330
LHGP+ P+ SP GITT+ HADV+A +A + SV
Sbjct: 1275 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSACISSV 1150
Score = 28.1 bits (55), Expect(4) = 9e-072
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 1346 WVVFGNIDGFKLNGGGAFDGEGNAAW 1423
>emb|X72292.1|ATEXOPB A.thaliana (clone GBGa483) mRNA for exopolygalacturonase
Length = 1652
Score = 170 bits (366), Expect(5) = 5e-071
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +2
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 590 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNT 769
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 770 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 949
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 950 VKGVTVRKCLIKNTDNGVRIKTW 1018
Score = 95.9 bits (203), Expect(5) = 3e-028
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -3
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1011 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 832
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 831 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 682
Score = 69.8 bits (146), Expect(5) = 5e-071
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT + I GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1145 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1324
Query: 303 GTAKGSI 283
G +
Sbjct: 1325 PILSGKL 1345
Score = 41.4 bits (84), Expect(5) = 5e-071
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+Y+V L F GPCKG
Sbjct: 353 STITVPKGEYMVESLEFKGPCKG 421
Score = 39.6 bits (80), Expect(5) = 5e-071
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1040 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1129
Score = 38.2 bits (77), Expect(5) = 5e-071
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2 / +2
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
D+ GA DGKTD + A AW AC A + TV
Sbjct: 263 DVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 367
Score = 32.2 bits (64), Expect(5) = 3e-028
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -2
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1129 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDAGG 1028
Score = 31.3 bits (62), Expect(5) = 3e-028
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +2 / -3
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1368 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1189
Query: 440 PVMLRNVTSLTETCE 484
P+M VTS TC+
Sbjct: 1188 PLMPLIVTSDNFTCD 1144
Score = 29.0 bits (57), Expect(5) = 3e-028
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / -3
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVLPS +AP
Sbjct: 366 TVIVLPAAQASFHAAANAALSSVLPSPLAP 277
Score = 24.9 bits (48), Expect(5) = 3e-028
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2 / -3
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T SP G V
Sbjct: 420 PLHGPLNSRLSTIYSPFGTVIV 355
>gb|AY091200.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1366
Score = 170 bits (366), Expect(5) = 2e-070
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +1
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 538 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNT 717
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 718 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 897
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 898 VKGVTVRKCLIKNTDNGVRIKTW 966
Score = 95.9 bits (203), Expect(5) = 3e-027
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -3
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 959 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 780
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 779 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 630
Score = 69.8 bits (146), Expect(5) = 2e-070
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT + I GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1093 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1272
Query: 303 GTAKGSI 283
G +
Sbjct: 1273 PILSGKL 1293
Score = 41.4 bits (84), Expect(5) = 2e-070
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+Y+V L F GPCKG
Sbjct: 301 STITVPKGEYMVESLEFKGPCKG 369
Score = 39.6 bits (80), Expect(5) = 2e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 988 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1077
Score = 35.4 bits (71), Expect(5) = 2e-070
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2 / +1
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
D+ GA D KTD + A AW AC A + TV
Sbjct: 211 DVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 315
Score = 32.2 bits (64), Expect(5) = 3e-027
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -2
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1077 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDAGG 976
Score = 31.3 bits (62), Expect(5) = 3e-027
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +2 / -3
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1316 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1137
Query: 440 PVMLRNVTSLTETCE 484
P+M VTS TC+
Sbjct: 1136 PLMPLIVTSDNFTCD 1092
Score = 24.9 bits (48), Expect(5) = 3e-027
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2 / -3
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T SP G V
Sbjct: 368 PLHGPLNSRLSTIYSPFGTVIV 303
Score = 24.4 bits (47), Expect(5) = 3e-027
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / -3
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVL S +AP
Sbjct: 314 TVIVLPAAQASFHAAANAALSSVLLSPLAP 225
>emb|BX823616.1|CNS0A4Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS57ZE12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1644
Score = 165 bits (354), Expect(5) = 2e-070
Identities = 61/124 (49%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N+ + I NSK FH+NI N ++IT+ D+ + AP + NTDG+H+G S+ ++++ + I
Sbjct: 674 NSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIK 853
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+ V +TVR C++KNT NGVR
Sbjct: 854 TGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVR 1033
Query: 630 IKSY 619
IK++
Sbjct: 1034 IKTW 1045
Score = 96.8 bits (205), Expect(5) = 2e-028
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1038 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 859
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 858 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 709
Score = 72.1 bits (151), Expect(5) = 2e-070
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT +NI GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1172 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1351
Query: 303 GTAKGSI 283
G +
Sbjct: 1352 PILSGKL 1372
Score = 42.3 bits (86), Expect(5) = 2e-070
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+YLV L F GPCKG
Sbjct: 383 STITVPKGEYLVESLEFKGPCKG 451
Score = 39.6 bits (80), Expect(5) = 2e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1067 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1156
Score = 38.6 bits (78), Expect(5) = 2e-070
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
+ D+ GA DGKTD + A AW AC A + TV
Sbjct: 287 SLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITV 397
Score = 32.2 bits (64), Expect(5) = 2e-028
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1156 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDTGG 1055
Score = 29.0 bits (57), Expect(5) = 2e-028
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVLPS +AP
Sbjct: 396 TVIVLPAAQASFHAAANAALSSVLPSPLAP 307
Score = 28.6 bits (56), Expect(5) = 2e-028
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1395 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1216
Query: 440 PVMLRNVTS 466
P+M VTS
Sbjct: 1215 PLMFLIVTS 1189
Score = 27.2 bits (53), Expect(5) = 2e-028
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T+ SP G V
Sbjct: 450 PLHGPLNSRLSTKYSPFGTVIV 385
>gb|AY114635.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060) mRNA,
complete cds
Length = 1484
Score = 170 bits (365), Expect(5) = 3e-070
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +1
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 541 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNT 720
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 721 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 900
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 901 VKGVTVRKCLIKNTDNGVRIKTW 969
Score = 96.8 bits (205), Expect(3) = 1e-025
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 962 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 783
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 782 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 633
Score = 72.1 bits (151), Expect(5) = 3e-070
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT +NI GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1096 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1275
Query: 303 GTAKGSI 283
G +
Sbjct: 1276 PILSGKL 1296
Score = 42.3 bits (86), Expect(5) = 3e-070
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+YLV L F GPCKG
Sbjct: 304 STITVPKGEYLVESLEFKGPCKG 372
Score = 39.6 bits (80), Expect(5) = 3e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 991 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1080
Score = 32.2 bits (64), Expect(3) = 1e-025
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1080 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDTGG 979
Score = 32.2 bits (64), Expect(5) = 3e-070
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
+ D+ GA DGKTD + A A AC A + TV
Sbjct: 208 SLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 318
Score = 28.6 bits (56), Expect(3) = 1e-025
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1319 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1140
Query: 440 PVMLRNVTS 466
P+M VTS
Sbjct: 1139 PLMFLIVTS 1113
>ref|NM_111664.1| Arabidopsis thaliana polygalacturonase AT3G07850 mRNA, complete cds
Length = 1690
Score = 170 bits (366), Expect(5) = 4e-070
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 627 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNT 806
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 807 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 986
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 987 VKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 95.9 bits (203), Expect(6) = 2e-028
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1048 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 869
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 868 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 69.8 bits (146), Expect(5) = 4e-070
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -2 / +3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT + I GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1182 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1361
Query: 303 GTAKGSI 283
G +
Sbjct: 1362 PILSGKL 1382
Score = 41.4 bits (84), Expect(5) = 4e-070
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+Y+V L F GPCKG
Sbjct: 390 STITVPKGEYMVESLEFKGPCKG 458
Score = 39.6 bits (80), Expect(5) = 4e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1166
Score = 35.4 bits (71), Expect(5) = 4e-070
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2 / +3
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
D+ GA D KTD + A AW AC A + TV
Sbjct: 300 DVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 32.2 bits (64), Expect(6) = 2e-028
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1166 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDAGG 1065
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1405 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1226
Query: 440 PVMLRNVTSLTETCE 484
P+M VTS TC+
Sbjct: 1225 PLMPLIVTSDNFTCD 1181
Score = 24.9 bits (48), Expect(6) = 2e-028
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T SP G V
Sbjct: 457 PLHGPLNSRLSTIYSPFGTVIV 392
Score = 24.4 bits (47), Expect(6) = 2e-028
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVL S +AP
Sbjct: 403 TVIVLPAAQASFHAAANAALSSVLLSPLAP 314
Score = 23.1 bits (44), Expect(6) = 2e-028
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1 / -3
Query: 1405 CRRFFLVGSCPFRCAYGTYHG*DEKHPESVVCGSHFSF 1518
C F+ CP G H * +KH V HF F
Sbjct: 194 CIFCFIDNRCPVCYCGGHNH**HKKHSACFVRTHHFLF 81
>gb|AY056173.1| Arabidopsis thaliana putative exopolygalacturonase (At3g07850) mRNA,
complete cds
Length = 1705
Score = 170 bits (366), Expect(5) = 4e-070
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +3
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 627 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNT 806
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 807 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 986
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 987 VKGVTVRKCLIKNTDNGVRIKTW 1055
Score = 95.9 bits (203), Expect(6) = 2e-028
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1048 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 869
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 868 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 719
Score = 69.8 bits (146), Expect(5) = 4e-070
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -2 / +3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT + I GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1182 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1361
Query: 303 GTAKGSI 283
G +
Sbjct: 1362 PILSGKL 1382
Score = 41.4 bits (84), Expect(5) = 4e-070
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+Y+V L F GPCKG
Sbjct: 390 STITVPKGEYMVESLEFKGPCKG 458
Score = 39.6 bits (80), Expect(5) = 4e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1077 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1166
Score = 35.4 bits (71), Expect(5) = 4e-070
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2 / +3
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
D+ GA D KTD + A AW AC A + TV
Sbjct: 300 DVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITV 404
Score = 32.2 bits (64), Expect(6) = 2e-028
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1166 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDAGG 1065
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1405 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1226
Query: 440 PVMLRNVTSLTETCE 484
P+M VTS TC+
Sbjct: 1225 PLMPLIVTSDNFTCD 1181
Score = 24.9 bits (48), Expect(6) = 2e-028
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2 / -1
Query: 1202 PLHGPVKLRGPTR*SPLGITTV 1267
PLHGP+ R T SP G V
Sbjct: 457 PLHGPLNSRLSTIYSPFGTVIV 392
Score = 24.4 bits (47), Expect(6) = 2e-028
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 1262 TVALPVASHADVHASWTAFVQSVLPSLVAP 1351
TV + A+ A HA+ A + SVL S +AP
Sbjct: 403 TVIVLPAAQASFHAAANAALSSVLLSPLAP 314
Score = 23.1 bits (44), Expect(6) = 2e-028
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1 / -3
Query: 1405 CRRFFLVGSCPFRCAYGTYHG*DEKHPESVVCGSHFSF 1518
C F+ CP G H * +KH V HF F
Sbjct: 194 CIFCFIDNRCPVCYCGGHNH**HKKHSACFVRTHHFLF 81
>gb|AY062447.1| Arabidopsis thaliana polygalacturonase; pectinase (At3g14060;
MDC16.18) mRNA, complete cds
Length = 1667
Score = 170 bits (365), Expect(5) = 5e-070
Identities = 64/143 (44%), Positives = 99/143 (69%)
Frame = -2 / +1
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+KT ++P + + N+ + I NSK FH+NI N ++IT+ D+ + AP + NT
Sbjct: 631 AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNT 810
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKD 688
DG+H+G S+ ++++ + I TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+
Sbjct: 811 DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP 990
Query: 687 VSDITVRNCVLKNTTNGVRIKSY 619
V +TVR C++KNT NGVRIK++
Sbjct: 991 VKGVTVRKCLIKNTDNGVRIKTW 1059
Score = 96.8 bits (205), Expect(3) = 1e-025
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 1052 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 873
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 872 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISVRVMFLQLRMFMWKSL 723
Score = 72.1 bits (151), Expect(5) = 5e-070
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT +NI GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 1186 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 1365
Query: 303 GTAKGSI 283
G +
Sbjct: 1366 PILSGKL 1386
Score = 42.3 bits (86), Expect(5) = 5e-070
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+YLV L F GPCKG
Sbjct: 394 STITVPKGEYLVESLEFKGPCKG 462
Score = 39.6 bits (80), Expect(5) = 5e-070
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 1081 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 1170
Score = 32.2 bits (64), Expect(3) = 1e-025
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 1170 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDTGG 1069
Score = 32.2 bits (64), Expect(5) = 5e-070
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2 / +1
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATV 1261
+ D+ GA DGKTD + A A AC A + TV
Sbjct: 298 SLDVKASGAKGDGKTDDSAAFAAARKEACAAGSTITV 408
Score = 28.6 bits (56), Expect(3) = 1e-025
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2 / -1
Query: 260 TRQAASASMLPLAVPLALLQTAMVLLFLPAYSTLTSMRETPLHGCVSEQSRLMASGVDDV 439
T A+ + PL + L L LP ++ L S R + G A+ V DV
Sbjct: 1409 TSVQAAGTNFPLRIGLMLEHAETAGPSLPLWTKLMSERAILVQGTPLLHISFTATFVADV 1230
Query: 440 PVMLRNVTS 466
P+M VTS
Sbjct: 1229 PLMFLIVTS 1203
>emb|AX652128.1| Sequence 1979 from Patent WO03000898
Length = 95769
Score = 167 bits (360), Expect(5) = 1e-069
Identities = 70/180 (38%), Positives = 107/180 (59%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
+T N +A+P + V + + IK +NSK H+N + + + VN+ AP D NTD
Sbjct: 27299 QTHNCRALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTD 27478
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S+ + I + I TGDDC++I G + ++ + CGPG GISVG LG++K EK V
Sbjct: 27479 GIKIGSSNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSV 27658
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ VRN + T+NGVRIK++ S+ F+N++M +V +PI IDQ +CP C
Sbjct: 27659 QGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 27838
Score = 70.7 bits (148), Expect(5) = 1e-069
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + ++DV F+NI GTS+ EA+ L CS+ PC V L ++N+ + G++ +VC N
Sbjct: 27929 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 28108
Query: 303 GTAKGSI 283
G G I
Sbjct: 28109 GWIGGKI 28129
Score = 43.7 bits (89), Expect(5) = 1e-069
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A AW AC+ G V IP G + +G + FTGPCK
Sbjct: 27020 AFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCK 27130
Score = 31.8 bits (63), Expect(5) = 1e-069
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
SWI +V+ + ++G G LDGQG+
Sbjct: 27200 SWIIFRYVDYLTVSGGGILDGQGS 27271
Score = 28.6 bits (56), Expect(5) = 1e-069
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQ 1306
FD+ GA DGKTD T V+
Sbjct: 26854 FDVRSYGARGDGKTDNTMVVK 26916
>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
complete sequence
Length = 95769
Score = 167 bits (360), Expect(5) = 1e-069
Identities = 70/180 (38%), Positives = 107/180 (59%)
Frame = -2 / +2
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
+T N +A+P + V + + IK +NSK H+N + + + VN+ AP D NTD
Sbjct: 27299 QTHNCRALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTD 27478
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S+ + I + I TGDDC++I G + ++ + CGPG GISVG LG++K EK V
Sbjct: 27479 GIKIGSSNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSV 27658
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ VRN + T+NGVRIK++ S+ F+N++M +V +PI IDQ +CP C
Sbjct: 27659 QGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 27838
Score = 70.7 bits (148), Expect(5) = 1e-069
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + ++DV F+NI GTS+ EA+ L CS+ PC V L ++N+ + G++ +VC N
Sbjct: 27929 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 28108
Query: 303 GTAKGSI 283
G G I
Sbjct: 28109 GWIGGKI 28129
Score = 43.7 bits (89), Expect(5) = 1e-069
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A AW AC+ G V IP G + +G + FTGPCK
Sbjct: 27020 AFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCK 27130
Score = 31.8 bits (63), Expect(5) = 1e-069
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
SWI +V+ + ++G G LDGQG+
Sbjct: 27200 SWIIFRYVDYLTVSGGGILDGQGS 27271
Score = 28.6 bits (56), Expect(5) = 1e-069
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 1368 FDISKLGATSDGKTDCTKAVQ 1306
FD+ GA DGKTD T V+
Sbjct: 26854 FDVRSYGARGDGKTDNTMVVK 26916
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 190 bits (409), Expect(5) = 5e-069
Identities = 73/155 (47%), Positives = 105/155 (67%)
Frame = -2 / -3
Query: 747 CGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENI 568
CGPG GISVG LGRYK+EK+V +TVRN ++ TT+G+RIK++ + S ++ S+ +ENI
Sbjct: 45972 CGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENI 45793
Query: 567 RMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQP 388
+M V NPIVIDQ +CP C +SHV +KDV + NI GTS++ EA+ + CS+T P
Sbjct: 45792 QMINVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFP 45613
Query: 387 CSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSI 283
C V L ++N+ Y G++ A+C N G+ +G I
Sbjct: 45612 CQDVELSNINLHYVGRDGLVTALCENVGGSIRGKI 45508
Score = 86.3 bits (182), Expect(5) = 5e-069
Identities = 34/99 (34%), Positives = 57/99 (57%)
Frame = -2 / -2
Query: 1047 SKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
+K N + + + V ++ + G++ +NSK H N+ + E + V +TAP D NT
Sbjct: 46630 NKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNT 46451
Query: 867 DGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSI 751
DG+ +G SS + I N TIGTGDDC++I G + + + +
Sbjct: 46450 DGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDV 46334
Score = 35.9 bits (72), Expect(5) = 5e-069
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 1131 WIELSHVNNIGITGSGTLDGQGT 1063
WI +V+N+ +TG G LDGQG+
Sbjct: 46723 WILFKYVDNLTVTGGGLLDGQGS 46655
Score = 33.6 bits (67), Expect(5) = 5e-069
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1275 GSATVVIPKGDYLVGPLNFTGPCKGS 1198
G +TV IP G + + + F+GPCK S
Sbjct: 46867 GRSTVYIPSGIFYLRQVTFSGPCKSS 46790
Score = 30.4 bits (60), Expect(5) = 5e-069
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2 / -2
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACE 1282
FD+ GA +D + D A AW AC+
Sbjct: 46963 FDVRNYGARADSQRDNAFAFTKAWNEACQ 46877
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21
Length = 59372
Score = 213 bits (459), Expect(4) = 6e-069
Identities = 84/164 (51%), Positives = 116/164 (70%)
Frame = -2 / -2
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
V +A + GI L++K FHIN+ ++++T +DV + APA+ NTDG+HVG S I I+NS
Sbjct: 11425 VTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSF 11246
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
I TGDDCVS+G G +LV+ +TCGPG GIS+G LGRY E++VS I + NC L+ T NG
Sbjct: 11245 ISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNG 11066
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ A TAS + FENI ++ V+NPI+IDQ +CP C
Sbjct: 11065 LRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQC 10934
Score = 140 bits (301), Expect(2) = 4e-033
Identities = 75/164 (45%), Positives = 87/164 (53%)
Frame = +2 / +3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM MGL T MFSK EAV +A + L+ PL V Q +M L
Sbjct: 10935 HWFHGQYSWSMRMGLLTFLRRMFSKWISEAVVVQAAEGHVLILRPLSVSWRVQLMILMPL 11114
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
T S L PR P L+PCPGP V LST+ P P ETQSSPV + EL +LI PTW P
Sbjct: 11115 TFSSWLYLPRLPILIPCPGPHVTLSTRRFFIPSPTETQSSPVEINELMILIPSLLPTWIP 11294
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIPATVALIT 997
SV SAGA+ TS V LMWK ++P A +T
Sbjct: 11295 SVLGLSAGAMILTSSNVTFFAPMTLMWKCFASKEVMPLIFASVT 11426
Score = 61.6 bits (128), Expect(4) = 6e-069
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = -2 / -3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + + +++F+ I GTS +A+ LLCS+ PC V + DVN++Y G + CSN
Sbjct: 10767 STIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVS 10588
Query: 303 GTAKGS 286
G+
Sbjct: 10587 PKLVGT 10570
Score = 43.2 bits (88), Expect(4) = 6e-069
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2 / -3
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A+ A+ AC+ +TV+IPKG+Y +G + GPCK
Sbjct: 11826 ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK 11716
Score = 34.1 bits (68), Expect(2) = 4e-033
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2 / +2
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSVL 1333
LHGP+ P+ SP GI TV HA ++A A++ +L
Sbjct: 11717 LHGPIITISPSLYSPFGIITVLFVGNWHASLNAFNNAYIVKIL 11845
Score = 30.4 bits (60), Expect(4) = 6e-069
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++N + G G DG+G A +
Sbjct: 11649 WVAFRNINGFKLNGGGVFDGEGNAAW 11572
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
complete sequence
Length = 121054
Score = 203 bits (438), Expect(4) = 6e-068
Identities = 83/164 (50%), Positives = 114/164 (69%)
Frame = -2 / -3
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
V NA + I +++K FHIN+ ++++T +V + APA+ NTDG+H+G S +SI+NS
Sbjct: 51362 VTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSR 51183
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
I TGDDCVS+G G +LV ++ CGPG GISVG LGRY E+DVS I V NC L+ T NG
Sbjct: 51182 ISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNG 51003
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ A TAS++ FENI + V+NPI+IDQ +CP C
Sbjct: 51002 LRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQC 50871
Score = 202 bits (435), Expect(4) = 1e-066
Identities = 78/164 (47%), Positives = 115/164 (70%)
Frame = -2 / -3
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
++N+ + I +++K FHIN+ ++++T+ ++ + AP D NTDG+H+G S + ILNS
Sbjct: 48452 ILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSF 48273
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
I TGDDC+S+G G + V+ +TCGPG GISVG LGRY E+DVS I V NC L+ T NG
Sbjct: 48272 ISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNG 48093
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ A TAS + FE+I +++V+NPI+IDQ +CP C
Sbjct: 48092 LRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQC 47961
Score = 202 bits (435), Expect(4) = 3e-065
Identities = 82/164 (50%), Positives = 113/164 (68%)
Frame = -2 / -1
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
V NA + I +++K FHIN+ ++++T +V V APA+ NTDG+H+G S + ILNS
Sbjct: 53893 VENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSK 53714
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
I TGDDC+S+G G + V+++ CGPG GISVG LGRY E+DV+ ITV NC L+ T NG
Sbjct: 53713 IATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNG 53534
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ A TAS + FENI + V+NPI+IDQ +CP C
Sbjct: 53533 LRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC 53402
Score = 165 bits (355), Expect(3) = 3e-054
Identities = 61/124 (49%), Positives = 91/124 (73%)
Frame = -2 / -2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N+ + I NSK FH+NI N ++IT+ D+ + AP + NTDG+H+G S+ ++++ + I
Sbjct: 57690 NSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIK 57511
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
TGDDCVSIG G ++V+++ CGPG GIS+G LGRY +E+ V +TVR C++KNT NGVR
Sbjct: 57510 TGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVR 57331
Query: 630 IKSY 619
IK++
Sbjct: 57330 IKTW 57319
Score = 137 bits (293), Expect(2) = 1e-031
Identities = 71/150 (47%), Positives = 84/150 (56%)
Frame = +2 / +3
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL T +MFSK EAV +A + L+ +PL V QF TVM +
Sbjct: 53403 HWFQGQYSWSMRIGLLTLLRMMFSK*IPEAVVAQAADGHVLILSPLSVP*RVQFTTVMPV 53582
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP + ST P P E QSSPV ++ELR+L P W P
Sbjct: 53583 TSCSCTYLPRLPTLIPCPGPHITFSTWRFFIPSPTEMQSSPVAILELRILTPSLLPKWIP 53762
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV SAGA+T T VM MWK L
Sbjct: 53763 SVLGLSAGAMTLTLSKVMFLAPRTFMWKFL 53852
Score = 129 bits (276), Expect(2) = 2e-030
Identities = 69/150 (46%), Positives = 81/150 (54%)
Frame = +2 / +1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL TS ++ SK +AV +A + L+ PL V Q T+M L
Sbjct: 47962 HWFQGQYSWSMRIGLLTSLRIISSK*ISDAVVEQAAEGHVLILNPLSVS*RVQLMTLMPL 48141
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP V ST P P E QSSPV M ELR+L P W P
Sbjct: 48142 TSCSCPYLPRLPTLIPCPGPHVTFST*RFFIPSPTEIQSSPVEMKELRILTPSLLPKWIP 48321
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV S+GA F VM + LMWK L
Sbjct: 48322 SVLGLSSGATILMLFMVMFLAPNTLMWKFL 48411
Score = 118 bits (252), Expect = 5e-025
Identities = 67/150 (44%), Positives = 78/150 (52%)
Frame = +2 / +1
Query: 506 HTFCGQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSL 685
H F GQ WSM +GL T ++FSK EAV +A L+ PL V Q T+M L
Sbjct: 50872 HWFQGQYSWSMRIGLLTFLRMIFSK*ILEAVVEQAAEGQVLILRPLSVSWRVQLMTLMPL 51051
Query: 686 TSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTP 865
TS S PR PTL+PCPGP T+ P P ETQSSPV ++EL M P W P
Sbjct: 51052 TSCSCPYLPRLPTLIPCPGPHTTFLTRRFTIPSPTETQSSPVEILELIMETPTLLPKWIP 51231
Query: 866 SVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
SV SAGA+ T VM LM K L
Sbjct: 51232 SVLGLSAGAMILTLSKVMFLAPITLM*KFL 51321
Score = 95.9 bits (203), Expect(2) = 4e-022
Identities = 51/110 (46%), Positives = 57/110 (51%)
Frame = +2 / +2
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
LMRTPL VFL F TV T S PR P +PCPGP ST P P+ETQSS
Sbjct: 57326 LMRTPLSVFLMRHFLTVTPFTGCSLGYLPRLPMEIPCPGPHSTFSTMRFSVPSPMETQSS 57505
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNL 955
PV + L + P W PSV S GA S VM +L M MWK+L
Sbjct: 57506 PVLIFAPIKLTPLDLPMWIPSVLRLSGGASIPISERVMFLQLRMFMWKSL 57655
Score = 69.8 bits (146), Expect(3) = 3e-054
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V + DVT + I GTS+T A+ L+CS+ PC+ ++L D+N+ + GK ++ CSN K
Sbjct: 57085 SQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 56906
Query: 303 GTAKGSI 283
G +
Sbjct: 56905 PILSGKL 56885
Score = 67.0 bits (140), Expect(4) = 6e-068
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = -2 / -3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 307
SS + + +++FR I GTS +A+ LLCS+ PC V + D+N++Y G + +CSN
Sbjct: 50735 SSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 50556
Query: 306 KGTAKGS 286
+ G+
Sbjct: 50555 RPKLVGT 50535
Score = 66.6 bits (139), Expect(4) = 3e-065
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = -2 / -3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + + D++F+NI GTS +A+ LLCS+ PC+ V + ++N+EY G + +CSN
Sbjct: 53183 STIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVS 53004
Query: 303 GTAKGS 286
G+
Sbjct: 53003 PKLVGT 52986
Score = 62.5 bits (130), Expect(6) = 3e-029
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = -2 / +3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S V V +V ++NI GTSS P A+ +CS+ PC G+S+ +V + + + + A CSN K
Sbjct: 94182 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 94361
Query: 303 GTAKGSIEAL 274
+G++ L
Sbjct: 94362 LDTRGNVSPL 94391
Score = 61.6 bits (128), Expect(4) = 1e-066
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = -2 / -1
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 307
+S + + +++F+NI GTS +A+ LLCS+ PC V + D++++Y G + CSN
Sbjct: 47863 ASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 47684
Query: 306 KGTAKGS 286
GS
Sbjct: 47683 SPKILGS 47663
Score = 58.8 bits (122), Expect(6) = 3e-029
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = -2 / +3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V+ I+L N++ H+ + +++ ++ VT+PAD NTDG+HV G+ I I +S +
Sbjct: 93018 NLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVR 93197
Query: 810 TG 805
TG
Sbjct: 93198 TG 93203
Score = 51.9 bits (107), Expect(4) = 1e-066
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = -2 / -2
Query: 1329 TDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
TD +A+ A+TSAC+++ + VVIPKG++ +G + GPCK
Sbjct: 48867 TDDMQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCK 48742
Score = 48.3 bits (99), Expect(4) = 6e-068
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 1317 KAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+A+ A+TSAC+A ++ VVI KG++ +G + TGPCK
Sbjct: 54317 QALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCK 54204
Score = 42.8 bits (87), Expect(6) = 3e-029
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC+SI G V ITCGPG GI
Sbjct: 93343 GDDCISIVSGSENVRATGITCGPGHGI 93423
Score = 41.4 bits (84), Expect(4) = 3e-065
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 1269 ATVVIPKGDYLVGPLNFTGPCKG 1201
+T+ +PKG+Y+V L F GPCKG
Sbjct: 58073 STITVPKGEYMVESLEFKGPCKG 58005
Score = 39.6 bits (80), Expect(6) = 3e-029
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG E VS++ V L TTNGVRIK++
Sbjct: 93756 SIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTW 93863
Score = 39.6 bits (80), Expect(3) = 3e-054
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / -2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
AS++ FE+I M+ V+ P++IDQ +CP C
Sbjct: 57297 ASNILFEDITMDNVSLPVLIDQEYCPYGHC 57208
Score = 37.3 bits (75), Expect(2) = 2e-030
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2 / +2
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHASWTAFVQSV 1330
LHGP+ P+ SP GITT+ HADV+A +A + SV
Sbjct: 48743 LHGPLISISPSLNSPFGITTLLGDEDWHADVNAFRSACISSV 48868
Score = 33.6 bits (67), Expect(6) = 3e-029
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
WI +VNN+ + G G +DG G + KS
Sbjct: 92658 WIVFENVNNLRVEGGGRIDGNGHIWWPKS 92744
Score = 33.6 bits (67), Expect(2) = 1e-031
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2 / +1
Query: 1205 LHGPVKLRGPTR*SPLGITTVALPVASHADVHA 1303
LHGPV P+ SP ITT+ A HADV+A
Sbjct: 54205 LHGPVISISPSLNSPFVITTLLAVGAWHADVNA 54303
Score = 32.2 bits (64), Expect(2) = 4e-022
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 505 AYLLRAEVLVDDDGVGHLLHPDVLEGEMGGRQHG 606
A +R +LVD++G +++H D+ E +GG G
Sbjct: 57208 AVAIRTVLLVDENGKANIVHCDIFEKNVGGDAGG 57309
Score = 29.0 bits (57), Expect(4) = 6e-068
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ ++ + G GT DG+G A +
Sbjct: 51594 WVVFQRMDGFRLNGGGTFDGEGNAAW 51517
Score = 28.6 bits (56), Expect(6) = 3e-029
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2 / +1
Query: 1314 AVQDAWTSACEATGSATVVIPK 1249
A AW +AC +TG +V PK
Sbjct: 92371 AFMKAWEAACSSTGIVYIVAPK 92436
Score = 28.6 bits (56), Expect(4) = 3e-065
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2 / -3
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +N + G G DG+G A +
Sbjct: 54134 WVVFLRINGFKLNGGGIFDGEGNAAW 54057
Score = 28.1 bits (55), Expect(4) = 1e-066
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVY 1054
W+ +++ + G G DG+G A +
Sbjct: 48672 WVVFGNIDGFKLNGGGAFDGEGNAAW 48595
>emb|Y16230.1|ATPGA3GE Arabidopsis thaliana PGA3 gene
Length = 2469
Score = 165 bits (354), Expect(5) = 3e-067
Identities = 61/124 (49%), Positives = 91/124 (73%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N + GI +N+K FH+ + +E++ ++++ +TAPA+ NTDG+H+ + +SIL+STI
Sbjct: 1196 NVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIA 1375
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
TGDDCVS+G G N V V+ + CGPG G+SVG LG+YK+E+DVS I V NC + T NG+R
Sbjct: 1376 TGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLR 1555
Query: 630 IKSY 619
IK++
Sbjct: 1556 IKTW 1567
Score = 114 bits (243), Expect(2) = 3e-028
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = +2 / -1
Query: 626 LMRTPLVVFLSTQFRTVMSLTSFSSL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSS 805
L+ PL V + Q T + LTS S L PR PTL PCPGPQ+ ST T L P P ETQSS
Sbjct: 1560 LILRPLSVSIIVQLLTWIPLTSSSFLYLPRLPTLRPCPGPQITRSTVTLLEPRPTETQSS 1381
Query: 806 PVPMVELRMLILEEPPTWTPSVFSTSAGAVTFTSFTVMLSELSMLMWKNLELSSLIP 976
PV MV RML L W PSV SAGAV+ + + S L+ MWK + L+P
Sbjct: 1380 PVAMVLSRMLTLSALLKWIPSVLGLSAGAVSLMFWMLTFSVLTKNMWKAFAFTELMP 1210
Score = 67.5 bits (141), Expect(5) = 3e-067
Identities = 21/48 (43%), Positives = 37/48 (77%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
S V++ D+ F+NI GT+ T + + ++CS++ PC GV+++DVN++Y GK
Sbjct: 1769 SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGK 1912
Score = 49.6 bits (102), Expect(5) = 3e-067
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / +1
Query: 1317 KAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
+A + W C++ AT+++PKG +L GP+ F GPCK
Sbjct: 778 QAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK 891
Score = 39.6 bits (80), Expect(2) = 3e-028
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 1187 MAMLLPLHGPVKLRGPTR*SPLGITTVALPVASHADVH 1300
+ + L LHGP K+ GP + PLG ++VA SH +H
Sbjct: 908 LTVTLLLHGPAKMTGPAKNVPLGTSSVAGTGLSHTCIH 795
Score = 34.1 bits (68), Expect(5) = 3e-067
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVY 1054
T W V+N+ +TG+GT G+G AV+
Sbjct: 949 TPEWFLFERVDNLVLTGTGTFHGKGEAVW 1035
Score = 33.1 bits (66), Expect(5) = 3e-067
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A + FENI M+ V NPI+IDQ +
Sbjct: 1589 AVDIKFENIIMQSVKNPIIIDQNY 1660
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 180 bits (387), Expect(4) = 3e-056
Identities = 75/170 (44%), Positives = 104/170 (61%)
Frame = -2 / -2
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
T+ V N+ + I LNSK H N + + V +TAP D NTDG+ +G S I
Sbjct: 704497 TMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNI 704318
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV +TVR+ V
Sbjct: 704317 HISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVF 704138
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
T++G+RIK++ + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 704137 NGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 703988
Score = 180 bits (387), Expect(4) = 1e-056
Identities = 75/170 (44%), Positives = 104/170 (61%)
Frame = -2 / -1
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
T+ V N+ + I LNSK H N + + V +TAP D NTDG+ +G S I
Sbjct: 707819 TMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNI 707640
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
I N+ IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV +TVR+ V
Sbjct: 707639 HISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVF 707460
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
T++G+RIK++ + S L S+ +ENI+M +V PI IDQ +CP C
Sbjct: 707459 NGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 707310
Score = 179 bits (386), Expect(5) = 1e-055
Identities = 75/170 (44%), Positives = 104/170 (61%)
Frame = -2 / -3
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
T+ V N+ + I LNSK H N + + V +TAP D NTDG+ +G S I
Sbjct: 701175 TMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNI 700996
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
I N+ IGTGDDC++I G + + +I CGPG GISVG LG+ KDEKDV +TVR+ V
Sbjct: 700995 HISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVF 700816
Query: 654 KNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
T++G+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 700815 NGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 700666
Score = 177 bits (380), Expect(3) = 6e-050
Identities = 73/164 (44%), Positives = 102/164 (62%)
Frame = -2 / -2
Query: 996 VINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNST 817
V N+ + I LNSK H N + + V +TAP D NTDG+ +G S I I N+
Sbjct: 711142 VNNSRMKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTN 710963
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNG 637
IGTGDDC++I G + + ++ CGPG GISVG LG+ KDEKDV +TVR+ V T++G
Sbjct: 710962 IGTGDDCIAILSGTTNLDISNVKCGPGHGISVGRLGKNKDEKDVKHLTVRDTVFNGTSDG 710783
Query: 636 VRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+RIK++ + S + S+ +ENI+M +V PI IDQ +CP C
Sbjct: 710782 IRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPC 710651
Score = 167 bits (360), Expect(4) = 1e-066
Identities = 70/180 (38%), Positives = 107/180 (59%)
Frame = -2 / -1
Query: 1044 KTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTD 865
+T N +A+P + V + + IK +NSK H+N + + + VN+ AP D NTD
Sbjct: 13740347 QTHNCRALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTD 13740168
Query: 864 GVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDV 685
G+ +G S+ + I + I TGDDC++I G + ++ + CGPG GISVG LG++K EK V
Sbjct: 13740167 GIKIGSSNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSV 13739988
Query: 684 SDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ VRN + T+NGVRIK++ S+ F+N++M +V +PI IDQ +CP C
Sbjct: 13739987 QGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPC 13739808
Score = 154 bits (330), Expect(3) = 8e-041
Identities = 59/124 (47%), Positives = 86/124 (69%)
Frame = -2 / -1
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N + G+ LNS+ FHI I+ +I ++DV + AP + NTDG+H+ S+ I + N++I
Sbjct: 8616335 NVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIK 8616156
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVR 631
TGDDC+SIGPG ++VD ITCGPG GIS+G L + +E+ V ++TV+N V T NG+R
Sbjct: 8616155 TGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLR 8615976
Query: 630 IKSY 619
IKS+
Sbjct: 8615975 IKSW 8615964
Score = 137 bits (294), Expect(3) = 4e-033
Identities = 55/126 (43%), Positives = 80/126 (63%)
Frame = -2 / -3
Query: 882 DVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRY 703
D NTD + +G S I I N+ IGT DDC+ I G + + ++ CG GISVG LG+
Sbjct: 672885 DSPNTDSIKMGSCSNIHISNTNIGTRDDCIVILSGTTNLDISNVKCGSVHGISVGSLGKN 672706
Query: 702 KDEKDVSDITVRNCVLKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYF 523
KDEKDV +TVR+ V T++G+RIK++ + S++ ++ +ENI+M +V PI IDQ +
Sbjct: 672705 KDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASIIVVTNFIYENIQMIDVGKPINIDQKY 672526
Query: 522 CPQKVC 505
CP C
Sbjct: 672525 CPHPPC 672508
Score = 107 bits (229), Expect(2) = 5e-023
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / +1
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E S ++ + L+R P +V L T TV TSFS
Sbjct: 707323 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 707502
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP + L + P + QSSPVPM M +L + P PSVF
Sbjct: 707503 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 707682
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 707683 LSPGAVIVT 707709
Score = 107 bits (229), Expect(2) = 7e-024
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / +3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E S ++ + L+R P +V L T TV TSFS
Sbjct: 704001 GQYF*SMLIGFPTSII*IFSYMKLETTSFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 704180
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP + L + P + QSSPVPM M +L + P PSVF
Sbjct: 704181 SLFFPKLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 704360
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 704361 LSPGAVIVT 704387
Score = 107 bits (229), Expect(2) = 7e-024
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / +2
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E ++ + L+R P +V L T TV TSFS
Sbjct: 700679 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 700858
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P+ PTL+PCPGP +ML + P + QSSPVPM M +L + P PSVF
Sbjct: 700859 SLFFPKLPTLIPCPGPHLMLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 701038
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 701039 LSPGAVIVT 701065
Score = 104 bits (221), Expect = 1e-020
Identities = 55/129 (42%), Positives = 71/129 (55%)
Frame = +2 / +3
Query: 518 GQKYWSMTMGLATSSILMFSKVRWEAVSTDSASTYDLMRTPLVVFLSTQFRTVMSLTSFS 697
GQ + SM +G TS I +FS ++ E ++ + L+R P +V L T TV TSFS
Sbjct: 710664 GQYF*SMLIGFPTSII*IFSYMKLETTIFEAEDSQVLIRIPSLVPLKTVSLTVKCFTSFS 710843
Query: 698 SL*RPRQPTLMPCPGPQVMLSTKTPLHPGPIETQSSPVPMVELRMLILEEPPTWTPSVFS 877
SL P PTL+PCPGP + L + P + QSSPVPM M +L + P PSVF
Sbjct: 710844 SLFFPNLPTLIPCPGPHLTLEISRLVVPERMAIQSSPVPMFVFEM*MLLQEPILIPSVFG 711023
Query: 878 TSAGAVTFT 904
S GAV T
Sbjct: 711024 LSPGAVIVT 711050
Score = 87.7 bits (185), Expect(3) = 1e-034
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = -2 / -1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRI 628
GDDC+SI GC+ V V ++ CGPG GIS+G LG+ + VS+ITVR+ V+ NT GVRI
Sbjct: 6556415 GDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRI 6556236
Query: 627 KSY 619
K++
Sbjct: 6556235 KTW 6556227
Score = 70.7 bits (148), Expect(4) = 1e-066
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAK 304
S + ++DV F+NI GTS+ EA+ L CS+ PC V L ++N+ + G++ +VC N
Sbjct: 13739717 SKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVG 13739538
Query: 303 GTAKGSI 283
G G I
Sbjct: 13739537 GWIGGKI 13739517
Score = 65.7 bits (137), Expect(5) = 2e-041
Identities = 23/79 (29%), Positives = 51/79 (64%)
Frame = -2 / -3
Query: 519 PQKVCPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGK 340
P+K+ ++ +S +S+++++F ++ GTS++ EAI + CS++ PC + L D+++E +
Sbjct: 14395176 PEKLSKTQKLQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNG 14394997
Query: 339 NNKTMAVCSNAKGTAKGSI 283
+ T + C A G++ G +
Sbjct: 14394996 DGFTESFCWEAYGSSSGQV 14394940
Score = 62.9 bits (131), Expect(3) = 1e-034
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = -2 / -2
Query: 993 INATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTI 814
I+ TV GI + NS H+ DN + V DVNV++P D NTDG+H+ + + I +T+
Sbjct: 6556687 IDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTL 6556508
Query: 813 GTG 805
G
Sbjct: 6556507 ACG 6556499
Score = 60.2 bits (125), Expect(6) = 2e-027
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V G+++ NS FH+ D + + + ++ +++P NTDG+H+G + + I NS +
Sbjct: 2127314 NIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVS 2127493
Query: 810 TG 805
G
Sbjct: 2127494 NG 2127499
Score = 59.7 bits (124), Expect(5) = 1e-055
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = -2 / -2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 700552 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 700412
Score = 59.7 bits (124), Expect(4) = 3e-056
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 703874 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 703734
Score = 59.7 bits (124), Expect(4) = 1e-056
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = -2 / -3
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
SHV ++D+ +NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 707196 SHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 707056
Score = 59.3 bits (123), Expect(3) = 6e-050
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
SHV ++D+ +NI GTS A++L CS++ PC V LID+N+++ G
Sbjct: 672395 SHVQIQDIKLKNIYGTSKNIMAVNLQCSKSFPCKNVELIDINLKHTG 672255
Score = 57.9 bits (120), Expect(4) = 3e-023
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N T+ ++ NS H+ + S+++ + D+ +T+P NTDG+H+ S+ +SI +S I
Sbjct: 14388440 NVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIA 14388619
Query: 810 TG 805
TG
Sbjct: 14388620 TG 14388625
Score = 54.7 bits (113), Expect(6) = 2e-027
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2 / +2
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
FD++ GA DG D T A QDAW +AC + G + + F+GPCK
Sbjct: 2126420 FDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGPCK 2126584
Score = 54.7 bits (113), Expect(5) = 2e-041
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = -2 / -2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V + +++S+ HI + + +T+ + V APA NTDG+H+ S I I N+T+
Sbjct: 14395936 NMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVS 14395757
Query: 810 TG 805
TG
Sbjct: 14395756 TG 14395751
Score = 53.3 bits (110), Expect(6) = 2e-027
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 816 IGTGDDCVSIGPGCNGVLVDSITCGPGQGI 727
I TGDDC+SIG GC+ V + +TCGP GI
Sbjct: 2127595 INTGDDCISIGTGCSDVDIQGVTCGPSHGI 2127684
Score = 51.0 bits (105), Expect(4) = 6e-025
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -2 / -3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVE 352
+S V + ++ +RNITGT+ + +AI+ CS+ PCS + L ++N+E
Sbjct: 10808211 TSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLE 10808077
Score = 48.3 bits (99), Expect(6) = 2e-027
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRS 490
+ S+L FENI+ME V N I++DQY+C K C + S
Sbjct: 2128504 SVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETS 2128611
Score = 47.8 bits (98), Expect(4) = 1e-056
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -2 / -3
Query: 1317 KAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIAIQ 1183
+A + AW SAC+ S ++ P +LVGP++F+GP +NI Q
Sbjct: 6557388 QAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVFQ 6557254
Score = 46.9 bits (96), Expect(3) = 8e-041
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2 / -3
Query: 453 RNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAG 343
+NI GTS+ A++L CS++ PC V LID+N+++ G
Sbjct: 710508 KNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG 710398
Score = 46.4 bits (95), Expect(4) = 3e-056
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2 / -3
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLV 1234
+ ++ GA +G + KA DAW +AC S + +PKG YLV
Sbjct: 8617074 SLNVLSFGANPNGIVESAKAFSDAWDAACGVEDSVVIYVPKGRYLV 8616937
Score = 44.6 bits (91), Expect(5) = 2e-041
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2 / -1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG+ K ++V DITV ++ +T NGVRIK++
Sbjct: 14395532 SIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTW 14395425
Score = 43.7 bits (89), Expect(4) = 3e-023
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / +3
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
TGDDCVSIG N + V + CGPG G+
Sbjct: 14388699 TGDDCVSIGDQVNNLNVTFMNCGPGHGV 14388782
Score = 43.7 bits (89), Expect(6) = 2e-027
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = -2 / +1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + + VS+ITVRN V++++ NG+R+K++
Sbjct: 2128381 SIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTW 2128488
Score = 43.7 bits (89), Expect(4) = 1e-066
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2 / -1
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A AW AC+ G V IP G + +G + FTGPCK
Sbjct: 13740626 AFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCK 13740516
Score = 43.7 bits (89), Expect(2) = 7e-024
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / +2
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 704771 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NV 704950
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 704951 PFGT*ILLLPL 704983
Score = 43.7 bits (89), Expect(2) = 7e-024
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2 / +1
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + LHGP P
Sbjct: 701449 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLHGPTNSTPPR*NV 701628
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 701629 PFGT*ILLLPL 701661
Score = 42.8 bits (87), Expect(3) = 4e-033
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 701516 TWINFRYINNLSISGSGTLDGQG 701448
Score = 42.8 bits (87), Expect(5) = 1e-055
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 704838 TWINFRYINNLSISGSGTLDGQG 704770
Score = 42.8 bits (87), Expect(4) = 3e-056
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 708161 TWINFRYINNLSISGSGTLDGQG 708093
Score = 42.8 bits (87), Expect(4) = 1e-056
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 1134 SWIELSHVNNIGITGSGTLDGQG 1066
+WI ++NN+ I+GSGTLDGQG
Sbjct: 711498 TWINFRYINNLSISGSGTLDGQG 711430
Score = 42.8 bits (87), Expect(5) = 2e-041
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -2 / -3
Query: 591 SHLTFENIRMEEVANPIVIDQYFCPQK 511
S + F NI+M V+NPI+IDQY+C +
Sbjct: 14395320 SKIIFRNIKMNNVSNPIIIDQYYCDSR 14395240
Score = 42.3 bits (86), Expect(3) = 8e-041
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2 / -1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRS 490
+ S + F NI M V NPI+IDQY+C C + S
Sbjct: 5617997 SVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTS 5617890
Score = 41.4 bits (84), Expect(4) = 6e-025
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = -2 / -1
Query: 579 FENIRMEEVANPIVIDQYFC 520
FEN+ M++VANPI+IDQ++C
Sbjct: 10808381 FENVVMQDVANPIIIDQFYC 10808322
Score = 40.9 bits (83), Expect(4) = 6e-025
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -2 / -2
Query: 876 ENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+NT V + +SK + + TGDDCVSI G + + I CGPG GI
Sbjct: 10808830 QNTIMVIIILNSKCYS*HFNLKTGDDCVSIVNGSAKIKMKRIYCGPGHGI 10808681
Score = 40.9 bits (83), Expect(2) = 5e-023
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = +2 / +1
Query: 1067 PWPSSVPEPVIPMLLT*DNSIQLAVYLSRSFDPSRLPSSWMAMLLPLHGPVKLRGPTR*S 1246
PWPSSVPEP I LL I ++ +S F + S + L+GP P
Sbjct: 708094 PWPSSVPEPEIERLLMYRKLIHVSCLMSLGFAGANKVPSMTNSIGFLYGPTNSTPPR*NF 708273
Query: 1247 PLGITTVALPV 1279
P G + LP+
Sbjct: 708274 PFGT*ILLLPL 708306
Score = 40.5 bits (82), Expect(5) = 1e-055
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVI 1255
FD++ GA D TD T A + AW +AC +TG + ++
Sbjct: 5619222 FDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALL 5619109
Score = 38.6 bits (78), Expect(4) = 6e-025
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -2 / -3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG+ + V+ + + LKNTTNG+RIK++
Sbjct: 10808604 SIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTW 10808497
Score = 38.2 bits (77), Expect(5) = 2e-041
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC+SI + + +I CGPG GI
Sbjct: 14395678 GDDCISIVKNSTQISISNIICGPGHGI 14395598
Score = 37.7 bits (76), Expect(3) = 6e-050
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / -2
Query: 1302 AWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
AWT AC A S +V YLV F GPC+
Sbjct: 10809661 AWTMACSAPNSVLLVPQGRSYLVNATKFDGPCQ 10809563
Score = 37.3 bits (75), Expect(3) = 1e-034
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2 / -3
Query: 585 LTFENIRMEEVANPIVIDQYFCPQKVC 505
+ F NI++ EV PIVIDQ++C C
Sbjct: 6556113 ILFSNIQLTEVQLPIVIDQFYCDHSKC 6556033
Score = 36.8 bits (74), Expect(3) = 4e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / -1
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 701660 SGSSKIYVPKGTFYLGGVEFVGPCK 701586
Score = 36.8 bits (74), Expect(5) = 1e-055
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 1278 TGSATVVIPKGDYLVGPLNFTGPCK 1204
+GS+ + +PKG + +G + F GPCK
Sbjct: 704982 SGSSKIYVPKGTFYLGGVEFVGPCK 704908
Score = 34.5 bits (69), Expect(4) = 3e-023
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2 / +1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LGR E V +I V + TTNG RIK++
Sbjct: 14388865 SIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTW 14388972
Score = 33.6 bits (67), Expect(6) = 2e-027
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 399 ETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSIEALA 271
E+ PCS + + D+++ A + ++CS A G+A+G I L+
Sbjct: 14389256 ESVPCSNLFMRDIDLSPADGIDSVSSLCSFAHGSAQGIIRPLS 14389384
Score = 31.8 bits (63), Expect(4) = 1e-066
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
SWI +V+ + ++G G LDGQG+
Sbjct: 13740446 SWIIFRYVDYLTVSGGGILDGQGS 13740375
Score = 29.9 bits (59), Expect(4) = 3e-023
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2 / +1
Query: 585 LTFENIRMEEVANPIVIDQYFCPQKVC 505
+ F +IR V NPI+IDQ++ C
Sbjct: 14389000 IEFFDIRFSSVQNPIIIDQFYGCAPTC 14389080
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,413,525,136
Number of Sequences: 1013581
Number of extensions: 29858357
Number of successful extensions: 180362
Number of sequences better than 1.0e-020: 240
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 110130858992
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)