TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670912.2.1
(844 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult ... 188 7e-055
emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3... 188 2e-054
gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) ... 188 2e-054
ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine a... 188 2e-054
gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-l... 188 2e-054
gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA... 188 2e-054
gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-l... 188 2e-054
gb|AY133595.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA... 188 2e-054
emb|AX506118.1| Sequence 813 from Patent WO0216655 188 2e-054
emb|AX651478.1| Sequence 279 from Patent WO03000898 188 2e-054
emb|CQ805396.1| Sequence 1807 from Patent WO2004035798 188 2e-054
gb|AY303129.1| Arabidopsis thaliana phenylalanine ammonia l... 188 2e-054
gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana ... 188 2e-054
gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots ... 188 2e-054
gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveg... 188 2e-054
gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, comp... 185 1e-053
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 193 4e-053
gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg e... 193 4e-053
ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine a... 193 4e-053
gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ... 193 4e-053
gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, c... 193 4e-053
gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ... 193 4e-053
emb|AX412245.1| Sequence 9 from Patent WO0222675 193 4e-053
emb|AX412319.1| Sequence 83 from Patent WO0222675 193 4e-053
emb|AX412320.1| Sequence 84 from Patent WO0222675 193 4e-053
emb|AX507018.1| Sequence 1713 from Patent WO0216655 193 4e-053
emb|AX651263.1| Sequence 47 from Patent WO03000898 193 4e-053
emb|CQ804940.1| Sequence 1351 from Patent WO2004035798 193 4e-053
emb|CQ805130.1| Sequence 1541 from Patent WO2004035798 193 4e-053
gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia l... 193 4e-053
dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine... 193 4e-053
emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cD... 193 4e-053
emb|BX823910.1|CNS0A7V1 Arabidopsis thaliana Full-length cD... 177 4e-051
gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots ... 188 4e-051
gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green ... 188 4e-051
gb|AV559270.1|AV559270 AV559270 Arabidopsis thaliana green ... 186 4e-050
gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana ... 193 5e-050
dbj|AK221124.1| Arabidopsis thaliana mRNA for phenylalanine... 193 8e-048
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 193 8e-048
gb|AI996802.1|AI996802 701668476 A. thaliana, Columbia Col-... 183 1e-047
gb|AI997452.1|AI997452 701554008 A. thaliana, Columbia Col-... 188 2e-047
gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone For... 188 3e-046
gb|AV544318.1|AV544318 AV544318 Arabidopsis thaliana roots ... 188 3e-046
gb|AV544709.1|AV544709 AV544709 Arabidopsis thaliana roots ... 188 3e-046
gb|AV547686.1|AV547686 AV547686 Arabidopsis thaliana roots ... 188 3e-046
gb|AV555308.1|AV555308 AV555308 Arabidopsis thaliana green ... 188 3e-046
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 188 3e-046
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 188 3e-046
gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome II... 164 2e-045
ref|NM_111869.3| Arabidopsis thaliana ammonia ligase/ ammon... 164 2e-045
gb|AY099657.1| Arabidopsis thaliana putative phenylalanine ... 164 2e-045
gb|BT000252.1| Arabidopsis thaliana putative phenylalanine ... 164 2e-045
gb|AY303130.1| Arabidopsis thaliana phenylalanine ammonia l... 164 2e-045
gb|AV542768.1|AV542768 AV542768 Arabidopsis thaliana roots ... 164 2e-045
gb|AV547892.1|AV547892 AV547892 Arabidopsis thaliana roots ... 183 5e-045
gb|AV558154.1|AV558154 AV558154 Arabidopsis thaliana green ... 180 4e-044
gb|BP814014.1|BP814014 BP814014 RAFL19 Arabidopsis thaliana... 142 4e-043
gb|BP606641.1|BP606641 BP606641 RAFL16 Arabidopsis thaliana... 164 2e-042
gb|AV797345.1|AV797345 AV797345 RAFL9 Arabidopsis thaliana ... 173 7e-042
gb|AV564149.1|AV564149 AV564149 Arabidopsis thaliana green ... 173 7e-042
gb|AV565930.1|AV565930 AV565930 Arabidopsis thaliana green ... 173 7e-042
gb|BP608663.1|BP608663 BP608663 RAFL16 Arabidopsis thaliana... 172 1e-041
gb|AI999678.1|AI999678 701557008 A. thaliana, Columbia Col-... 164 2e-041
gb|AV782023.1|AV782023 AV782023 RAFL4 Arabidopsis thaliana ... 167 3e-040
gb|BP786658.1|BP786658 BP786658 RAFL7 Arabidopsis thaliana ... 167 3e-040
gb|BP832067.1|BP832067 BP832067 RAFL19 Arabidopsis thaliana... 154 4e-040
gb|AV797794.1|AV797794 AV797794 RAFL9 Arabidopsis thaliana ... 165 2e-039
gb|AV560700.1|AV560700 AV560700 Arabidopsis thaliana green ... 164 3e-039
gb|AV564792.1|AV564792 AV564792 Arabidopsis thaliana green ... 163 6e-039
gb|BP636326.1|BP636326 BP636326 RAFL18 Arabidopsis thaliana... 162 1e-038
gb|AV539086.1|AV539086 AV539086 Arabidopsis thaliana roots ... 162 1e-038
gb|BP814512.1|BP814512 BP814512 RAFL19 Arabidopsis thaliana... 100 4e-038
gb|BP619543.1|BP619543 BP619543 RAFL16 Arabidopsis thaliana... 160 5e-038
gb|AV547233.1|AV547233 AV547233 Arabidopsis thaliana roots ... 159 1e-037
emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome ... 152 2e-037
ref|NM_120505.3| Arabidopsis thaliana PAL3 (PHENYL ALANINE ... 152 2e-037
gb|AY528562.1| Arabidopsis thaliana phenylalanine ammonia-l... 152 2e-037
gb|AV796746.1|AV796746 AV796746 RAFL9 Arabidopsis thaliana ... 157 4e-037
gb|AV558919.1|AV558919 AV558919 Arabidopsis thaliana green ... 157 4e-037
gb|BP786338.1|BP786338 BP786338 RAFL7 Arabidopsis thaliana ... 157 4e-037
gb|AV542315.1|AV542315 AV542315 Arabidopsis thaliana roots ... 156 9e-037
gb|AV548841.1|AV548841 AV548841 Arabidopsis thaliana roots ... 155 1e-036
gb|AV557330.1|AV557330 AV557330 Arabidopsis thaliana green ... 155 1e-036
gb|BP597546.1|BP597546 BP597546 RAFL15 Arabidopsis thaliana... 155 1e-036
gb|AV545374.1|AV545374 AV545374 Arabidopsis thaliana roots ... 155 2e-036
gb|L33679.1|ATHPAL3 Arabidopsis thaliana (strain Columbia) ... 149 2e-036
gb|AV801904.1|AV801904 AV801904 RAFL9 Arabidopsis thaliana ... 152 1e-035
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 152 2e-035
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 152 2e-035
gb|AV803304.1|AV803304 AV803304 RAFL9 Arabidopsis thaliana ... 151 3e-035
gb|AV799715.1|AV799715 AV799715 RAFL9 Arabidopsis thaliana ... 149 8e-035
gb|AV820059.1|AV820059 AV820059 RAFL11 Arabidopsis thaliana... 149 1e-034
gb|AV797825.1|AV797825 AV797825 RAFL9 Arabidopsis thaliana ... 149 1e-034
gb|BP794537.1|BP794537 BP794537 RAFL7 Arabidopsis thaliana ... 149 1e-034
gb|AV806160.1|AV806160 AV806160 RAFL9 Arabidopsis thaliana ... 148 3e-034
gb|AV559798.1|AV559798 AV559798 Arabidopsis thaliana green ... 148 3e-034
gb|BP606244.1|BP606244 BP606244 RAFL16 Arabidopsis thaliana... 116 3e-034
gb|AV814576.1|AV814576 AV814576 RAFL9 Arabidopsis thaliana ... 147 5e-034
gb|AV786039.1|AV786039 AV786039 RAFL6 Arabidopsis thaliana ... 146 1e-033
gb|AV796302.1|AV796302 AV796302 RAFL9 Arabidopsis thaliana ... 119 1e-033
gb|AV814928.1|AV814928 AV814928 RAFL9 Arabidopsis thaliana ... 145 2e-033
gb|BP598055.1|BP598055 BP598055 RAFL16 Arabidopsis thaliana... 145 2e-033
gb|AV796886.1|AV796886 AV796886 RAFL9 Arabidopsis thaliana ... 144 5e-033
gb|AV790081.1|AV790081 AV790081 RAFL6 Arabidopsis thaliana ... 142 2e-032
gb|AV799437.1|AV799437 AV799437 RAFL9 Arabidopsis thaliana ... 142 2e-032
gb|AA713341.1|AA713341 32901 CD4-16 Arabidopsis thaliana cD... 139 8e-032
gb|AV821038.1|AV821038 AV821038 RAFL11 Arabidopsis thaliana... 138 2e-031
gb|BP577255.1|BP577255 BP577255 RAFL14 Arabidopsis thaliana... 138 3e-031
gb|BP612213.1|BP612213 BP612213 RAFL16 Arabidopsis thaliana... 128 4e-031
gb|AW004366.1|AW004366 701956642 A. thaliana, mixed source ... 130 5e-031
gb|AV810491.1|AV810491 AV810491 RAFL9 Arabidopsis thaliana ... 136 1e-030
gb|BP570190.1|BP570190 BP570190 RAFL14 Arabidopsis thaliana... 129 1e-030
gb|AV797838.1|AV797838 AV797838 RAFL9 Arabidopsis thaliana ... 135 1e-030
gb|AV813837.1|AV813837 AV813837 RAFL9 Arabidopsis thaliana ... 135 1e-030
gb|AV546412.1|AV546412 AV546412 Arabidopsis thaliana roots ... 135 1e-030
gb|BX840680.1|BX840680 BX840680 Arabidopsis thaliana Siliqu... 70 2e-030
gb|BP573114.1|BP573114 BP573114 RAFL14 Arabidopsis thaliana... 134 3e-030
gb|AV820261.1|AV820261 AV820261 RAFL11 Arabidopsis thaliana... 133 5e-030
gb|AV548764.1|AV548764 AV548764 Arabidopsis thaliana roots ... 133 5e-030
gb|BP588973.1|BP588973 BP588973 RAFL15 Arabidopsis thaliana... 133 5e-030
gb|BP604246.1|BP604246 BP604246 RAFL16 Arabidopsis thaliana... 133 5e-030
gb|BP609384.1|BP609384 BP609384 RAFL16 Arabidopsis thaliana... 133 5e-030
gb|AV814676.1|AV814676 AV814676 RAFL9 Arabidopsis thaliana ... 133 7e-030
gb|AV814261.1|AV814261 AV814261 RAFL9 Arabidopsis thaliana ... 132 1e-029
gb|BP780672.1|BP780672 BP780672 RAFL7 Arabidopsis thaliana ... 132 1e-029
gb|BP589483.1|BP589483 BP589483 RAFL15 Arabidopsis thaliana... 79 1e-028
gb|BP634703.1|BP634703 BP634703 RAFL17 Arabidopsis thaliana... 125 2e-027
gb|AV800034.1|AV800034 AV800034 RAFL9 Arabidopsis thaliana ... 93 3e-027
gb|AV547875.1|AV547875 AV547875 Arabidopsis thaliana roots ... 124 4e-027
gb|BP795043.1|BP795043 BP795043 RAFL7 Arabidopsis thaliana ... 124 4e-027
emb|CR384143.1| Arabidopsis thaliana transposon insertion S... 124 4e-027
gb|BP621312.1|BP621312 BP621312 RAFL16 Arabidopsis thaliana... 115 5e-027
gb|AV812944.1|AV812944 AV812944 RAFL9 Arabidopsis thaliana ... 88 2e-026
gb|AV819960.1|AV819960 AV819960 RAFL11 Arabidopsis thaliana... 122 2e-026
gb|BP792140.1|BP792140 BP792140 RAFL7 Arabidopsis thaliana ... 122 2e-026
gb|BP650104.1|BP650104 BP650104 RAFL19 Arabidopsis thaliana... 108 2e-025
gb|AV519394.2|AV519394 AV519394 Arabidopsis thaliana aboveg... 117 4e-025
gb|BP637983.1|BP637983 BP637983 RAFL19 Arabidopsis thaliana... 116 7e-025
gb|AV553551.1|AV553551 AV553551 Arabidopsis thaliana roots ... 87 1e-024
gb|BP788013.1|BP788013 BP788013 RAFL7 Arabidopsis thaliana ... 115 2e-024
emb|CR384133.1| Arabidopsis thaliana transposon insertion S... 115 2e-024
gb|AA713101.1|AA713101 32661 CD4-15 Arabidopsis thaliana cD... 112 3e-024
gb|BP644367.1|BP644367 BP644367 RAFL19 Arabidopsis thaliana... 93 4e-024
gb|AV813866.1|AV813866 AV813866 RAFL9 Arabidopsis thaliana ... 81 4e-024
gb|BP648305.1|BP648305 BP648305 RAFL19 Arabidopsis thaliana... 83 6e-023
gb|BP653434.1|BP653434 BP653434 RAFL19 Arabidopsis thaliana... 81 1e-022
gb|AV553022.1|AV553022 AV553022 Arabidopsis thaliana roots ... 79 1e-022
gb|BP604648.1|BP604648 BP604648 RAFL16 Arabidopsis thaliana... 109 1e-022
gb|BP600906.1|BP600906 BP600906 RAFL16 Arabidopsis thaliana... 77 2e-022
gb|BP649958.1|BP649958 BP649958 RAFL19 Arabidopsis thaliana... 95 1e-021
>gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS12ZG08 3PRIM, mRNA
sequence
Length = 1006
Score = 188 bits (404), Expect(4) = 7e-055
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 471 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 292
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 291 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 130
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 134 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 313
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 314 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 469
Score = 30.9 bits (61), Expect(4) = 7e-055
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 68 ERQGRLHNARFCEKDL 115
E G LH +RFCEKDL
Sbjct: 630 ESNGELHPSRFCEKDL 583
Score = 27.6 bits (54), Expect(4) = 7e-055
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 522 YPLMQRLRQVIVDHALS 472
Score = 27.2 bits (53), Expect(4) = 7e-055
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 564 EQVFTYVDDPCS 529
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 530 LQGSSTYVNTCSRS 571
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2
Length = 92611
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 68665 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 68486
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 68485 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 68324
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 68328 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 68507
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 68508 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 68663
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 68815 GELHPSRFCEKDL 68777
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 68716 YPLMQRLRQVIVDHALS 68666
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 68758 EQVFTYVDDPCS 68723
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 68724 LQGSSTYVNTCSRS 68765
>gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) phenylalanine ammonia-lyase
(PAL2) gene, complete cds
Length = 4507
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 3488 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 3667
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 3668 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 3829
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 3825 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 3646
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 3645 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 3490
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 3338 GELHPSRFCEKDL 3376
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 3437 YPLMQRLRQVIVDHALS 3487
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 3395 EQVFTYVDDPCS 3430
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 3429 LQGSSTYVNTCSRS 3388
>ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine ammonia-lyase AT3G53260
(PAL2) mRNA, complete cds
Length = 2520
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1974 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 2153
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 2154 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2315
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2311 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 2132
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 2131 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1976
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1824 GELHPSRFCEKDL 1862
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1923 YPLMQRLRQVIVDHALS 1973
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1881 EQVFTYVDDPCS 1916
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1915 LQGSSTYVNTCSRS 1874
>gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2414
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1915 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 2094
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 2095 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2256
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2252 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 2073
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 2072 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1917
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1765 GELHPSRFCEKDL 1803
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1864 YPLMQRLRQVIVDHALS 1914
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1822 EQVFTYVDDPCS 1857
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1856 LQGSSTYVNTCSRS 1815
>gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA, complete cds
Length = 2406
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1917 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 2096
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 2097 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2258
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2254 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 2075
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 2074 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1919
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1767 GELHPSRFCEKDL 1805
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1866 YPLMQRLRQVIVDHALS 1916
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1824 EQVFTYVDDPCS 1859
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1858 LQGSSTYVNTCSRS 1817
>gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2260
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>gb|AY133595.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA, complete cds
Length = 2154
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>emb|AX506118.1| Sequence 813 from Patent WO0216655
Length = 2154
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>emb|AX651478.1| Sequence 279 from Patent WO03000898
Length = 2154
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>emb|CQ805396.1| Sequence 1807 from Patent WO2004035798
Length = 2154
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>gb|AY303129.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL2) mRNA,
complete cds
Length = 2154
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 1813 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 1992
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 1993 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2154
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 1971
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 1970 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1815
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1663 GELHPSRFCEKDL 1701
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1762 YPLMQRLRQVIVDHALS 1812
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1720 EQVFTYVDDPCS 1755
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1754 LQGSSTYVNTCSRS 1713
>gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-16-D08 3',
mRNA sequence
Length = 694
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 500 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 321
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 320 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 159
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 163 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 342
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 343 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 498
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 650 GELHPSRFCEKDL 612
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 551 YPLMQRLRQVIVDHALS 501
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 593 EQVFTYVDDPCS 558
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 559 LQGSSTYVNTCSRS 600
>gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ65f09F 3', mRNA sequence
Length = 651
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 458 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 279
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 278 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 117
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 121 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 300
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 301 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 456
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 608 GELHPSRFCEKDL 570
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 509 YPLMQRLRQVIVDHALS 459
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 551 EQVFTYVDDPCS 516
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 517 LQGSSTYVNTCSRS 558
>gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL57f08F 3', mRNA
sequence
Length = 639
Score = 188 bits (404), Expect(4) = 2e-054
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 454 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 275
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 274 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 113
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 117 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 296
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 297 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 452
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 604 GELHPSRFCEKDL 566
Score = 27.6 bits (54), Expect(4) = 2e-054
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 505 YPLMQRLRQVIVDHALS 455
Score = 27.2 bits (53), Expect(4) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 547 EQVFTYVDDPCS 512
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 513 LQGSSTYVNTCSRS 554
>gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, complete sequence
Length = 2402
Score = 185 bits (399), Expect(4) = 1e-053
Identities = 73/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA +G+ +PNRIKECRSYPLYRF
Sbjct: 1916 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGSGTAPIPNRIKECRSYPLYRF 2095
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 2096 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2257
Score = 113 bits (241), Expect(2) = 2e-025
Identities = 57/112 (50%), Positives = 70/112 (62%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 2253 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 2074
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +P AA AASTS GS A + S + K++V+ S SP
Sbjct: 2073 LHSLIRLGIGAVPLP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 1918
Score = 29.0 bits (57), Expect(4) = 1e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1766 GELHPSRFCEKDL 1804
Score = 27.6 bits (54), Expect(4) = 1e-053
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1865 YPLMQRLRQVIVDHALS 1915
Score = 27.2 bits (53), Expect(4) = 1e-053
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1823 EQVFTYVDDPCS 1858
Score = 24.9 bits (48), Expect(2) = 2e-025
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1857 LQGSSTYVNTCSRS 1816
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence
Length = 134151
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 119122 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 118943
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 118942 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 118781
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / +3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 118791 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 118970
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 118971 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 119120
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 119272 GELHPSRFCEKDL 119234
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 119215 EQVYTYADDPCS 119180
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 119181 LQGSSAYV*TCSRS 119222
>gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg erecta) phenylalanine
ammonia-lyase (PAL) gene, complete cds
Length = 4921
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 4235 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 4414
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 4415 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 4576
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 4566 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 4387
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 4386 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 4237
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 4085 GELHPSRFCEKDL 4123
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 4142 EQVYTYADDPCS 4177
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 4176 LQGSSAYV*TCSRS 4135
>ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine ammonia-lyase AT2G37040
(PAL1) mRNA, complete cds
Length = 2530
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1963 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2142
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2143 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2304
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2294 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 2115
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 2114 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1965
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1813 GELHPSRFCEKDL 1851
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1870 EQVYTYADDPCS 1905
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1904 LQGSSAYV*TCSRS 1863
>gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2527
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1963 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2142
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2143 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2304
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2294 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 2115
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 2114 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1965
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1813 GELHPSRFCEKDL 1851
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1870 EQVYTYADDPCS 1905
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1904 LQGSSAYV*TCSRS 1863
>gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 2484
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1963 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2142
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2143 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2304
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2294 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 2115
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 2114 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1965
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1813 GELHPSRFCEKDL 1851
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1870 EQVYTYADDPCS 1905
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1904 LQGSSAYV*TCSRS 1863
>gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2209
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|AX412245.1| Sequence 9 from Patent WO0222675
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|AX412319.1| Sequence 83 from Patent WO0222675
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|AX412320.1| Sequence 84 from Patent WO0222675
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|AX507018.1| Sequence 1713 from Patent WO0216655
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|AX651263.1| Sequence 47 from Patent WO03000898
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|CQ804940.1| Sequence 1351 from Patent WO2004035798
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>emb|CQ805130.1| Sequence 1541 from Patent WO2004035798
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL1) mRNA,
complete cds
Length = 2178
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 1837 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 2016
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 2017 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 2178
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 2168 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 1989
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 1988 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 1839
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1687 GELHPSRFCEKDL 1725
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 1744 EQVYTYADDPCS 1779
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 1778 LQGSSAYV*TCSRS 1737
>dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine ammonia lyase, partial
cds, clone: RAFL22-40-C04
Length = 1167
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 734 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 913
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 914 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 1075
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 1065 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 886
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 885 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 736
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 584 GELHPSRFCEKDL 622
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 641 EQVYTYADDPCS 676
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 675 LQGSSAYV*TCSRS 634
>emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL35ZG05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 714
Score = 193 bits (415), Expect(3) = 4e-053
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 183 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 362
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 363 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 524
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 514 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 335
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 334 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 185
Score = 29.0 bits (57), Expect(3) = 4e-053
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 33 GELHPSRFCEKDL 71
Score = 27.6 bits (54), Expect(3) = 4e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 90 EQVYTYADDPCS 125
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 124 LQGSSAYV*TCSRS 83
>emb|BX823910.1|CNS0A7V1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS91ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2403
Score = 177 bits (380), Expect(4) = 4e-051
Identities = 70/114 (61%), Positives = 89/114 (78%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSI K+ E++++A LPKE EAARAA NG+ +PNRIKECRSYP YRF
Sbjct: 1968 NGETEKNAVTSISQKIGALEEELKAVLPKEAEAARAAYGNGTAPIPNRIKECRSYPSYRF 2147
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 2148 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 2309
Score = 111 bits (237), Expect(2) = 7e-025
Identities = 56/112 (50%), Positives = 69/112 (61%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y G D
Sbjct: 2305 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYDGYD 2126
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AAS S GS A + S + +++V+ S SP
Sbjct: 2125 LHSLIRLGIGAVPFP*AALAASASFGSTALSSSSRAPIF*EIEVTAFFSVSP 1970
Score = 29.0 bits (57), Expect(4) = 4e-051
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G LH +RFCEKDL
Sbjct: 1818 GELHPSRFCEKDL 1856
Score = 27.6 bits (54), Expect(4) = 4e-051
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 1917 YPLMQRLRQVIVDHALS 1967
Score = 27.2 bits (53), Expect(4) = 4e-051
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 1875 EQVFTYVDDPCS 1910
Score = 24.9 bits (48), Expect(2) = 7e-025
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 1909 LQGSSTYVNTCSRS 1868
>gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ56a09F 3', mRNA sequence
Length = 650
Score = 188 bits (404), Expect(3) = 4e-051
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 544 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 365
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 364 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 203
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 207 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 386
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 387 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 542
Score = 27.6 bits (54), Expect(3) = 4e-051
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 595 YPLMQRLRQVIVDHALS 545
Score = 27.2 bits (53), Expect(3) = 4e-051
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 637 EQVFTYVDDPCS 602
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 603 LQGSSTYVNTCSRS 644
>gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ102g03F 3', mRNA sequence
Length = 589
Score = 188 bits (404), Expect(3) = 4e-051
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 487 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 308
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 307 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 146
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 329
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 330 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 485
Score = 27.6 bits (54), Expect(3) = 4e-051
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 538 YPLMQRLRQVIVDHALS 488
Score = 27.2 bits (53), Expect(3) = 4e-051
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E VF Y DDPCS
Sbjct: 580 EQVFTYVDDPCS 545
Score = 24.9 bits (48), Expect(2) = 3e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
L GSS Y NT SRS
Sbjct: 546 LQGSSTYVNTCSRS 587
>gb|AV559270.1|AV559270 AV559270 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ114c08F 3', mRNA sequence
Length = 576
Score = 186 bits (401), Expect(3) = 4e-050
Identities = 73/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 487 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 308
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTG+K SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 307 VREELGTKLLTGQKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 146
Score = 113 bits (242), Expect = 6e-024
Identities = 57/112 (50%), Positives = 70/112 (62%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD F PV VP+SS TN Y+G D
Sbjct: 150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFCPVNNFVPSSSLTNLYNGYD 329
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 330 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 485
Score = 27.6 bits (54), Expect(3) = 4e-050
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQ+ R V+V+HAL+
Sbjct: 538 YPLMQRLRQVIVDHALS 488
Score = 25.4 bits (49), Expect(3) = 4e-050
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 141 VFXYADDPCS 170
VF Y DDPCS
Sbjct: 574 VFTYVDDPCS 545
>gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-09-D14 3',
mRNA sequence
Length = 663
Score = 193 bits (415), Expect(2) = 5e-050
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 537 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 358
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 357 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 196
Score = 127 bits (271), Expect(2) = 1e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / +2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 206 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 385
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 386 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 535
Score = 27.6 bits (54), Expect(2) = 5e-050
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E V+ YADDPCS
Sbjct: 630 EQVYTYADDPCS 595
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY T SRS
Sbjct: 596 LQGSSAYV*TCSRS 637
>dbj|AK221124.1| Arabidopsis thaliana mRNA for phenylalanine ammonia lyase, partial
cds, clone: RAFL22-91-F15
Length = 537
Score = 193 bits (415), Expect = 8e-048
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 24 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 203
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 204 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 365
Score = 127 bits (271), Expect = 6e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 355 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 176
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 175 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 26
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 193 bits (415), Expect = 8e-048
Identities = 75/114 (65%), Positives = 94/114 (82%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PNRIKECRSYPLYRF
Sbjct: 15565022 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRF 15564843
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GTE LTGEK SPGEE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 15564842 VREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 15564681
Score = 127 bits (271), Expect = 6e-028
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -2 / +1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL +SSPGD+ FSPV+ SVP+SS TN Y+G D H
Sbjct: 15564691 GMGAPFHSLRHSIIGSMILPSQIAVKTLSNSSPGDVTFSPVKSSVPSSSLTNLYNGYDLH 15564870
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLIL G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 15564871 SLILFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 15565020
>gb|AI996802.1|AI996802 701668476 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701668476, mRNA sequence
Length = 613
Score = 183 bits (394), Expect(2) = 1e-047
Identities = 71/114 (62%), Positives = 90/114 (78%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG++E++ TSIF K+ FE++++A LPKEVEAARAA +NG+ +PN IKECR YPLYRF
Sbjct: 517 NGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNXIKECRXYPLYRF 338
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+G E LTGEK SPGE +KV AI + K IDP++ECL EWNG P+P+C*
Sbjct: 337 VREELGXELLTGEKVTSPGEXFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC* 176
Score = 118 bits (252), Expect = 3e-025
Identities = 58/110 (52%), Positives = 69/110 (62%)
Frame = -2 / +3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
G G+PFHSLRHS GSM L +A TL SSPGD+ FSPV+ S P+SS TN Y G H
Sbjct: 186 GMGAPFHSLRHSIIGSMILPSQIAVKTLSXSSPGDVTFSPVKSSXPSSSLTNLYXGYXLH 365
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI G +P S AA AASTS GS A + S + L K++V+ S SP
Sbjct: 366 SLIXFGIADVPLS*AALAASTSFGSTALSSSSKAPILWKIEVTAFFSLSP 515
Score = 29.5 bits (58), Expect(2) = 1e-047
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCSPQLRADAE 194
E + YADDPCS + D+E
Sbjct: 611 EQXYTYADDPCSRNVPVDSE 552
>gb|AI997452.1|AI997452 701554008 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701554008, mRNA sequence
Length = 639
Score = 188 bits (406), Expect(2) = 2e-047
Identities = 74/115 (64%), Positives = 93/115 (80%)
Frame = +2 / -3
Query: 227 PNGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYR 406
PNG+ E++ T IF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYR
Sbjct: 520 PNGETEKNAVTPIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYR 341
Query: 407 FVREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
FVREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 340 FVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 176
Score = 117 bits (250), Expect(2) = 6e-026
Identities = 59/114 (51%), Positives = 71/114 (62%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 180 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 359
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFG 226
HSLI LG +PF AA AASTS GS A + S + K+ V+ S SP G
Sbjct: 360 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIGVTAFFSVSPLG 521
Score = 23.5 bits (45), Expect(2) = 2e-047
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / -1
Query: 135 EAVFXYADDPCS 170
E V Y DDPCS
Sbjct: 609 EQVSTYVDDPCS 574
Score = 22.6 bits (43), Expect(2) = 6e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 169 LHGSSAYXNTASRS 128
L GSS Y +T SRS
Sbjct: 575 LQGSSTYVDTCSRS 616
>gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone Forward-Subtracted Library
Arabidopsis thaliana cDNA clone AtAOzF26 similar to
phenylalanine ammonia lyase PAL2, mRNA sequence
Length = 529
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 37 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 216
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 217 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 378
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 374 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 195
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 194 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 39
>gb|AV544318.1|AV544318 AV544318 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ39f08F 3', mRNA sequence
Length = 425
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 416 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 237
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 236 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 75
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 79 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 258
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 259 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 414
>gb|AV544709.1|AV544709 AV544709 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55g04F 3', mRNA sequence
Length = 392
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 374 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 195
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 194 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 33
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 37 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 216
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 217 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 372
>gb|AV547686.1|AV547686 AV547686 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL37f03F 3', mRNA sequence
Length = 505
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 487 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 308
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 307 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 146
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 150 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 329
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 330 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 485
>gb|AV555308.1|AV555308 AV555308 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ011d06F 3', mRNA sequence
Length = 526
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 512 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 333
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 332 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 171
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 175 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 354
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 355 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 510
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 19708048 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 19707869
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 19707868 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 19707707
Score = 164 bits (353), Expect = 3e-039
Identities = 66/112 (58%), Positives = 82/112 (73%)
Frame = +2 / -1
Query: 236 DAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVR 415
+ E + TS+F K+ FE +++ LPKEVE R E G+ + NRIKECRSYPLYRFVR
Sbjct: 3162099 EREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVR 3161920
Query: 416 EEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+E+ TE LTGE RSPGEE +KV +AI+ K IDPLLECLKEWNG P+ +C*
Sbjct: 3161919 DELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC* 3161764
Score = 118 bits (253), Expect = 2e-025
Identities = 58/112 (51%), Positives = 74/112 (66%)
Frame = -2 / +2
Query: 570 QQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG* 391
QQ G+PFHSLRHS++GS+ +A +TL +SSPGD FSPV SV +SSRTNRY+G*
Sbjct: 3161765 QQIETGAPFHSLRHSNNGSISFPSEIAKNTLSNSSPGDRTFSPVSSSVFSSSRTNRYNG* 3161944
Query: 390 DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSAS 235
DRHSLI L +P S + R STSLG ++ + S + L K DV+ S S
Sbjct: 3161945 DRHSLIRLAIADVPSSYSTRTRSTSLGRSSFSSASKAPILWKTDVAELASRS 3162100
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 19707711 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 19707890
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 19707891 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 19708046
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 188 bits (404), Expect = 3e-046
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+ E++ TSIF K+ FE++++A LPKEVEAARAA NG+ +PNRIKECRSYPLYRF
Sbjct: 19755575 NGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRF 19755396
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT+ LTGEK SPGEE +KV A+ + K IDPL++CLKEWNG P+P+C*
Sbjct: 19755395 VREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC* 19755234
Score = 164 bits (353), Expect = 3e-039
Identities = 66/112 (58%), Positives = 82/112 (73%)
Frame = +2 / +2
Query: 236 DAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVR 415
+ E + TS+F K+ FE +++ LPKEVE R E G+ + NRIKECRSYPLYRFVR
Sbjct: 3207479 EREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVR 3207658
Query: 416 EEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+E+ TE LTGE RSPGEE +KV +AI+ K IDPLLECLKEWNG P+ +C*
Sbjct: 3207659 DELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC* 3207814
Score = 118 bits (253), Expect = 2e-025
Identities = 58/112 (51%), Positives = 74/112 (66%)
Frame = -2 / -3
Query: 570 QQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG* 391
QQ G+PFHSLRHS++GS+ +A +TL +SSPGD FSPV SV +SSRTNRY+G*
Sbjct: 3207813 QQIETGAPFHSLRHSNNGSISFPSEIAKNTLSNSSPGDRTFSPVSSSVFSSSRTNRYNG* 3207634
Query: 390 DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSAS 235
DRHSLI L +P S + R STSLG ++ + S + L K DV+ S S
Sbjct: 3207633 DRHSLIRLAIADVPSSYSTRTRSTSLGRSSFSSASKAPILWKTDVAELASRS 3207478
Score = 116 bits (247), Expect = 1e-024
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -2 / +1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q G G+PFHSLR S +GS+ L +A TL +SSPGD FSPV VP+SS TN Y+G D
Sbjct: 19755238 QIGIGAPFHSLRQSINGSISLPSHIAVKTLSNSSPGDTTFSPVNNFVPSSSLTNLYNGYD 19755417
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
HSLI LG +PF AA AASTS GS A + S + K++V+ S SP
Sbjct: 19755418 LHSLIRLGIGAVPFP*AALAASTSFGSTALSSSSKAPIF*KIEVTAFFSVSP 19755573
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
complete sequence
Length = 87937
Score = 164 bits (353), Expect(3) = 2e-045
Identities = 66/112 (58%), Positives = 82/112 (73%)
Frame = +2 / -2
Query: 236 DAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVR 415
+ E + TS+F K+ FE +++ LPKEVE R E G+ + NRIKECRSYPLYRFVR
Sbjct: 23292 EREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVR 23113
Query: 416 EEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+E+ TE LTGE RSPGEE +KV +AI+ K IDPLLECLKEWNG P+ +C*
Sbjct: 23112 DELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC* 22957
Score = 118 bits (253), Expect(2) = 2e-027
Identities = 58/112 (51%), Positives = 74/112 (66%)
Frame = -2 / +2
Query: 570 QQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG* 391
QQ G+PFHSLRHS++GS+ +A +TL +SSPGD FSPV SV +SSRTNRY+G*
Sbjct: 22958 QQIETGAPFHSLRHSNNGSISFPSEIAKNTLSNSSPGDRTFSPVSSSVFSSSRTNRYNG* 23137
Query: 390 DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSAS 235
DRHSLI L +P S + R STSLG ++ + S + L K DV+ S S
Sbjct: 23138 DRHSLIRLAIADVPSSYSTRTRSTSLGRSSFSSASKAPILWKTDVAELASRS 23293
Score = 30.4 bits (60), Expect(3) = 2e-045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQK R +LV+HALA
Sbjct: 23349 YPLMQKLRHILVDHALA 23299
Score = 28.6 bits (56), Expect(3) = 2e-045
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
E VF YADDPCS
Sbjct: 23391 EYVFSYADDPCS 23356
Score = 25.8 bits (50), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY NT SRS
Sbjct: 23357 LQGSSAYENTYSRS 23398
>ref|NM_111869.3| Arabidopsis thaliana ammonia ligase/ ammonia-lyase AT3G10340 mRNA,
complete cds
Length = 2584
Score = 164 bits (353), Expect(3) = 2e-045
Identities = 66/112 (58%), Positives = 82/112 (73%)
Frame = +2 / +2
Query: 236 DAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVR 415
+ E + TS+F K+ FE +++ LPKEVE R E G+ + NRIKECRSYPLYRFVR
Sbjct: 2036 EREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVR 2215
Query: 416 EEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+E+ TE LTGE RSPGEE +KV +AI+ K IDPLLECLKEWNG P+ +C*
Sbjct: 2216 DELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC* 2371
Score = 118 bits (253), Expect(2) = 3e-027
Identities = 58/112 (51%), Positives = 74/112 (66%)
Frame = -2 / -2
Query: 570 QQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG* 391
QQ G+PFHSLRHS++GS+ +A +TL +SSPGD FSPV SV +SSRTNRY+G*
Sbjct: 2370 QQIETGAPFHSLRHSNNGSISFPSEIAKNTLSNSSPGDRTFSPVSSSVFSSSRTNRYNG* 2191
Query: 390 DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSAS 235
DRHSLI L +P S + R STSLG ++ + S + L K DV+ S S
Sbjct: 2190 DRHSLIRLAIADVPSSYSTRTRSTSLGRSSFSSASKAPILWKTDVAELASRS 2035
Score = 30.4 bits (60), Expect(3) = 2e-045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 178 YALMQKXRAVLVEHALA 228
Y LMQK R +LV+HALA
Sbjct: 1979 YPLMQKLRHILVDHALA 2029
Score = 28.6 bits (56), Expect(3) = 2e-045
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
E VF YADDPCS
Sbjct: 1937 EYVFSYADDPCS 1972
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY NT SRS
Sbjct: 1971 LQGSSAYENTYSRS 1930
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,200,618,803
Number of Sequences: 1013581
Number of extensions: 13435768
Number of successful extensions: 131621
Number of sequences better than 1.0e-020: 162
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 55153224896
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)