TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670867.2.1
(790 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX828085.1|CNS0A2XB Arabidopsis thaliana Full-length cD... 159 9e-038
ref|NM_119188.1| Arabidopsis thaliana unknown protein AT4G3... 159 9e-038
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 71 4e-029
emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosom... 71 4e-029
gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 71 4e-029
gb|CB074588.1|CB074588 EST01503 Avirulent Peronospora paras... 120 7e-026
gb|CK121122.1|CK121122 204d20.p1 AtM1 Arabidopsis thaliana ... 120 7e-026
gb|AY085398.1| Arabidopsis thaliana clone 149985 mRNA, comp... 120 7e-026
gb|AY049306.1| Arabidopsis thaliana At1g44800/T12C22_7 mRNA... 119 9e-026
gb|AY149964.1| Arabidopsis thaliana At1g44800/T12C22_7 mRNA... 119 9e-026
emb|BX815403.1|CNS0ACUO Arabidopsis thaliana Full-length cD... 119 9e-026
emb|BX815438.1|CNS0ACVB Arabidopsis thaliana Full-length cD... 119 9e-026
ref|NM_103561.2| Arabidopsis thaliana unknown protein AT1G4... 119 9e-026
gb|CK121807.1|CK121807 201o08.p1 AtM1 Arabidopsis thaliana ... 118 2e-025
gb|CF774495.1|CF774495 AG_FSL_40C07 Arabidopsis ag-1 35S:AG... 117 3e-025
emb|AX652043.1| Sequence 940 from Patent WO03000898 117 3e-025
gb|BT022009.1| Arabidopsis thaliana At4g08300 gene, complet... 117 3e-025
ref|NM_116899.2| Arabidopsis thaliana unknown protein AT4G0... 117 3e-025
ref|NM_001036659.1| Arabidopsis thaliana unknown protein AT... 102 4e-024
ref|NM_202899.1| Arabidopsis thaliana unknown protein AT4G2... 102 4e-024
ref|NM_001036658.1| Arabidopsis thaliana unknown protein AT... 102 4e-024
ref|NM_118943.3| Arabidopsis thaliana unknown protein AT4G2... 102 4e-024
gb|AF370525.1|AF370525 Arabidopsis thaliana Medicago noduli... 102 4e-024
emb|BX827627.1|CNS0A2T2 Arabidopsis thaliana Full-length cD... 102 4e-024
gb|AY081516.1| Arabidopsis thaliana Medicago nodulin N21-li... 102 4e-024
emb|AX506658.1| Sequence 1353 from Patent WO0216655 102 4e-024
gb|AY045896.1| Arabidopsis thaliana putative nodulin protei... 113 6e-024
gb|AY065236.1| Arabidopsis thaliana putative nodulin protei... 113 6e-024
gb|AY091450.1| Arabidopsis thaliana putative nodulin protei... 113 6e-024
gb|AY133841.1| Arabidopsis thaliana clone U18725 putative n... 113 6e-024
gb|BT000668.1| Arabidopsis thaliana clone RAFL07-07-I04 (R1... 113 6e-024
emb|CQ804562.1| Sequence 973 from Patent WO2004035798 113 6e-024
ref|NM_102037.3| Arabidopsis thaliana unknown protein AT1G2... 113 6e-024
ref|NM_106203.3| Arabidopsis thaliana unknown protein AT1G7... 113 6e-024
dbj|AK118732.1| Arabidopsis thaliana At3g30340 mRNA for unk... 112 1e-023
ref|NM_113933.2| Arabidopsis thaliana unknown protein AT3G3... 112 1e-023
emb|AX506955.1| Sequence 1650 from Patent WO0216655 109 1e-022
gb|BT005333.1| Arabidopsis thaliana At4g08290 mRNA, complet... 109 1e-022
emb|AX651964.1| Sequence 850 from Patent WO03000898 109 1e-022
gb|AY088024.1| Arabidopsis thaliana clone 40485 mRNA, compl... 109 1e-022
dbj|AK118606.1| Arabidopsis thaliana At4g08290 mRNA for put... 109 1e-022
ref|NM_116898.2| Arabidopsis thaliana unknown protein AT4G0... 109 1e-022
ref|NM_125866.1| Arabidopsis thaliana unknown protein AT5G6... 108 3e-022
gb|AV541840.1|AV541840 AV541840 Arabidopsis thaliana roots ... 107 5e-022
ref|NM_112703.3| Arabidopsis thaliana unknown protein AT3G1... 107 5e-022
ref|NM_001035644.1| Arabidopsis thaliana unknown protein AT... 107 5e-022
emb|BX831593.1|CNS0A0XA Arabidopsis thaliana Full-length cD... 106 7e-022
emb|BX832761.1|CNS0A0Y9 Arabidopsis thaliana Full-length cD... 106 7e-022
ref|NM_120787.2| Arabidopsis thaliana unknown protein AT5G0... 106 7e-022
gb|BP610300.1|BP610300 BP610300 RAFL16 Arabidopsis thaliana... 102 1e-021
emb|BX827056.1|CNS0A38L Arabidopsis thaliana Full-length cD... 94 4e-021
gb|BX840060.1|BX840060 BX840060 Arabidopsis thaliana Hormon... 103 8e-021
>emb|BX828085.1|CNS0A2XB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH50ZF09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1353
Score = 159 bits (342), Expect = 9e-038
Identities = 59/115 (51%), Positives = 84/115 (73%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSAWMC+ T+Q A++ FL DP+AW +HS E + C+++G+ S ++F +Q+W I+
Sbjct: 786 LSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSEFATCLYAGIGASALSFTVQAWAIA 965
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP++SA+F PLCTVI T+ AA EE++ GSL+G + VI GLY VLWGKA D
Sbjct: 966 KRGPVFSALFNPLCTVIVTILAALFFHEEIYTGSLIGGLGVILGLYTVLWGKAKD 1130
>ref|NM_119188.1| Arabidopsis thaliana unknown protein AT4G30420 mRNA, complete cds
Length = 1122
Score = 159 bits (342), Expect = 9e-038
Identities = 59/115 (51%), Positives = 84/115 (73%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSAWMC+ T+Q A++ FL DP+AW +HS E + C+++G+ S ++F +Q+W I+
Sbjct: 613 LSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSEFATCLYAGIGASALSFTVQAWAIA 792
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP++SA+F PLCTVI T+ AA EE++ GSL+G + VI GLY VLWGKA D
Sbjct: 793 KRGPVFSALFNPLCTVIVTILAALFFHEEIYTGSLIGGLGVILGLYTVLWGKAKD 957
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 70.7 bits (148), Expect(3) = 4e-029
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -2 / +3
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVG 352
C+ G+ S ++F +Q+W I+ RGP++SA+F PLCTVI T+ AA EE++ G
Sbjct: 10791219 CIC*GIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTG 10791380
Score = 57.9 bits (120), Expect(3) = 4e-029
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFS 502
L+LSAWMC+ T+Q A++ FL DP+AW +HS E + C+++
Sbjct: 10791011 LSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSEFATCLYA 10791139
Score = 39.6 bits (80), Expect(3) = 4e-029
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 351 SLLGAIAVIAGLYVVLWGKAGD 286
SL+G + VI GLY VLWGKA D
Sbjct: 10791461 SLIGGLGVILGLYTVLWGKAKD 10791526
>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
Length = 194862
Score = 70.7 bits (148), Expect(3) = 4e-029
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVG 352
C+ G+ S ++F +Q+W I+ RGP++SA+F PLCTVI T+ AA EE++ G
Sbjct: 24169 CIC*GIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTG 24330
Score = 57.9 bits (120), Expect(3) = 4e-029
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFS 502
L+LSAWMC+ T+Q A++ FL DP+AW +HS E + C+++
Sbjct: 23961 LSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSEFATCLYA 24089
Score = 39.6 bits (80), Expect(3) = 4e-029
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 351 SLLGAIAVIAGLYVVLWGKAGD 286
SL+G + VI GLY VLWGKA D
Sbjct: 24411 SLIGGLGVILGLYTVLWGKAKD 24476
>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23
Length = 134784
Score = 70.7 bits (148), Expect(3) = 4e-029
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -2 / -1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVG 352
C+ G+ S ++F +Q+W I+ RGP++SA+F PLCTVI T+ AA EE++ G
Sbjct: 77148 CIC*GIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTG 76987
Score = 57.9 bits (120), Expect(3) = 4e-029
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFS 502
L+LSAWMC+ T+Q A++ FL DP+AW +HS E + C+++
Sbjct: 77356 LSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSEFATCLYA 77228
Score = 39.6 bits (80), Expect(3) = 4e-029
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 351 SLLGAIAVIAGLYVVLWGKAGD 286
SL+G + VI GLY VLWGKA D
Sbjct: 76906 SLIGGLGVILGLYTVLWGKAKD 76841
>gb|CB074588.1|CB074588 EST01503 Avirulent Peronospora parasitica Infected Forward
Subtracted Library Arabidopsis thaliana cDNA clone
APP-FC8 similar to nodulin protein, mRNA sequence
Length = 645
Score = 120 bits (256), Expect = 7e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 177 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGALAAVYSGVVCSGIAYYIQSIVIK 356
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 357 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVVGLYSVVWGKSKD 521
>gb|CK121122.1|CK121122 204d20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D20204
5-PRIME, mRNA sequence
Length = 774
Score = 120 bits (256), Expect = 7e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 219 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 398
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 399 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVVGLYSVVWGKSKD 563
>gb|AY085398.1| Arabidopsis thaliana clone 149985 mRNA, complete sequence
Length = 1477
Score = 120 bits (256), Expect = 7e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 778 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 957
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 958 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVVGLYSVVWGKSKD 1122
>gb|AY049306.1| Arabidopsis thaliana At1g44800/T12C22_7 mRNA, complete cds
Length = 1473
Score = 119 bits (255), Expect = 9e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 776 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 955
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 956 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 1120
>gb|AY149964.1| Arabidopsis thaliana At1g44800/T12C22_7 mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect = 9e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 640 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 819
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 820 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 984
>emb|BX815403.1|CNS0ACUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS58ZC02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1387
Score = 119 bits (255), Expect = 9e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 761 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 940
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 941 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 1105
>emb|BX815438.1|CNS0ACVB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS5ZH08 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1378
Score = 119 bits (255), Expect = 9e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 751 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 930
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 931 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 1095
>ref|NM_103561.2| Arabidopsis thaliana unknown protein AT1G44800 mRNA, complete cds
Length = 1584
Score = 119 bits (255), Expect = 9e-026
Identities = 46/115 (40%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 778 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 957
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 958 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 1122
>gb|CK121807.1|CK121807 201o08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O08201
5-PRIME, mRNA sequence
Length = 670
Score = 118 bits (252), Expect = 2e-025
Identities = 45/115 (39%), Positives = 74/115 (64%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SG+ SG+ +Y+QS I
Sbjct: 114 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGLVCSGIAYYIQSIVIK 293
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT A VL E++H+GS++GA+ ++ GLY V+WGK+ D
Sbjct: 294 QRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKD 458
>gb|CF774495.1|CF774495 AG_FSL_40C07 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 40C07, mRNA sequence
Length = 988
Score = 117 bits (251), Expect = 3e-025
Identities = 45/118 (38%), Positives = 75/118 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L +C + T+ +A+ ++ DPSAW+I V+SGV SG+ +Y+QS I
Sbjct: 316 LSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIK 495
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANK 277
RGP+++ F P+C +IT A VL ++H+GS++GA+ ++ GLY V+WGK+ D ++
Sbjct: 496 QRGPVFTTSFSPMCMIITAFLGALVLAXKIHLGSIIGAVFIVVGLYSVVWGKSKDESE 669
>emb|AX652043.1| Sequence 940 from Patent WO03000898
Length = 1107
Score = 117 bits (251), Expect = 3e-025
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L W+C + T+ + + ++ D SAW++ V+SGV SG+ +Y+QS I
Sbjct: 634 LSLVMWICAMGTVLNTIASLIMVRDVSAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIR 813
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT VL E++H+GS++GAI ++ GLY V+WGKA D
Sbjct: 814 ERGPVFTTSFSPMCMIITAFLGVLVLAEKIHLGSIIGAIFIVFGLYSVVWGKAKD 978
>gb|BT022009.1| Arabidopsis thaliana At4g08300 gene, complete cds
Length = 1313
Score = 117 bits (251), Expect = 3e-025
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L W+C + T+ + + ++ D SAW++ V+SGV SG+ +Y+QS I
Sbjct: 668 LSLVMWICAMGTVLNTIASLIMVRDVSAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIR 847
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT VL E++H+GS++GAI ++ GLY V+WGKA D
Sbjct: 848 ERGPVFTTSFSPMCMIITAFLGVLVLAEKIHLGSIIGAIFIVFGLYSVVWGKAKD 1012
>ref|NM_116899.2| Arabidopsis thaliana unknown protein AT4G08300 mRNA, complete cds
Length = 1444
Score = 117 bits (251), Expect = 3e-025
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L W+C + T+ + + ++ D SAW++ V+SGV SG+ +Y+QS I
Sbjct: 782 LSLVMWICAMGTVLNTIASLIMVRDVSAWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIR 961
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP+++ F P+C +IT VL E++H+GS++GAI ++ GLY V+WGKA D
Sbjct: 962 ERGPVFTTSFSPMCMIITAFLGVLVLAEKIHLGSIIGAIFIVFGLYSVVWGKAKD 1126
>ref|NM_001036659.1| Arabidopsis thaliana unknown protein AT4G28040 transcript variant
AT4G28040.4 mRNA, complete cds
Length = 1990
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 1009 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 1188
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 1189 AIILGLYIVLWGKSED 1236
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 979 WKLDSFLKLSCCIYSG 1026
>ref|NM_202899.1| Arabidopsis thaliana unknown protein AT4G28040 transcript variant
AT4G28040.2 mRNA, complete cds
Length = 1840
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 859 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 1038
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 1039 AIILGLYIVLWGKSED 1086
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 829 WKLDSFLKLSCCIYSG 876
>ref|NM_001036658.1| Arabidopsis thaliana unknown protein AT4G28040 transcript variant
AT4G28040.3 mRNA, complete cds
Length = 1774
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 793 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 972
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 973 AIILGLYIVLWGKSED 1020
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 763 WKLDSFLKLSCCIYSG 810
>ref|NM_118943.3| Arabidopsis thaliana unknown protein AT4G28040 transcript variant
AT4G28040.1 mRNA, complete cds
Length = 1762
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 781 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 960
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 961 AIILGLYIVLWGKSED 1008
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 751 WKLDSFLKLSCCIYSG 798
>gb|AF370525.1|AF370525 Arabidopsis thaliana Medicago nodulin N21-like protein (T13J8.150)
mRNA, complete cds
Length = 1226
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +3
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 762 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 941
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 942 AIILGLYIVLWGKSED 989
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 732 WKLDSFLKLSCCIYSG 779
>emb|BX827627.1|CNS0A2T2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS87ZB09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1210
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 781 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 960
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 961 AIILGLYIVLWGKSED 1008
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 751 WKLDSFLKLSCCIYSG 798
>gb|AY081516.1| Arabidopsis thaliana Medicago nodulin N21-like protein (At4g28040)
mRNA, complete cds
Length = 1176
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 721 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 900
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 901 AIILGLYIVLWGKSED 948
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 691 WKLDSFLKLSCCIYSG 738
>emb|AX506658.1| Sequence 1353 from Patent WO0216655
Length = 1080
Score = 102 bits (218), Expect(2) = 4e-024
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 721 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 900
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 901 AIILGLYIVLWGKSED 948
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 546 WRIHSLFELSCCVFSG 499
W++ S +LSCC++SG
Sbjct: 691 WKLDSFLKLSCCIYSG 738
>gb|AY045896.1| Arabidopsis thaliana putative nodulin protein (At1g75500) mRNA,
complete cds
Length = 1697
Score = 113 bits (242), Expect = 6e-024
Identities = 41/122 (33%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F D AW HS +EL +++G+ SG+ F +Q WCI
Sbjct: 757 LSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCID 936
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY VL+GK+ +
Sbjct: 937 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAA 1116
Query: 270 VE 265
+E
Sbjct: 1117 LE 1122
>gb|AY065236.1| Arabidopsis thaliana putative nodulin protein (At1g21890) mRNA,
complete cds
Length = 1494
Score = 113 bits (242), Expect = 6e-024
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C++ TL+ + + D SAW+I L +SGV SGV +Y+Q +
Sbjct: 747 LSLTTLICLMGTLEGTAVSLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMR 926
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP++ A F PLC VIT VL E +H+GS++G + +I GLY V+WGK D
Sbjct: 927 ERGPVFVATFNPLCVVITAALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKD 1091
>gb|AY091450.1| Arabidopsis thaliana putative nodulin protein (At1g75500) mRNA,
complete cds
Length = 1201
Score = 113 bits (242), Expect = 6e-024
Identities = 41/122 (33%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F D AW HS +EL +++G+ SG+ F +Q WCI
Sbjct: 688 LSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCID 867
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY VL+GK+ +
Sbjct: 868 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAA 1047
Query: 270 VE 265
+E
Sbjct: 1048 LE 1053
>gb|AY133841.1| Arabidopsis thaliana clone U18725 putative nodulin protein
(At1g21890) mRNA, complete cds
Length = 1201
Score = 113 bits (242), Expect = 6e-024
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C++ TL+ + + D SAW+I L +SGV SGV +Y+Q +
Sbjct: 667 LSLTTLICLMGTLEGTAVSLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMR 846
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP++ A F PLC VIT VL E +H+GS++G + +I GLY V+WGK D
Sbjct: 847 ERGPVFVATFNPLCVVITAALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKD 1011
>gb|BT000668.1| Arabidopsis thaliana clone RAFL07-07-I04 (R10794) putative nodulin
(At1g75500) mRNA, complete cds
Length = 1632
Score = 113 bits (242), Expect = 6e-024
Identities = 41/122 (33%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F D AW HS +EL +++G+ SG+ F +Q WCI
Sbjct: 757 LSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCID 936
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY VL+GK+ +
Sbjct: 937 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAA 1116
Query: 270 VE 265
+E
Sbjct: 1117 LE 1122
>emb|CQ804562.1| Sequence 973 from Patent WO2004035798
Length = 1170
Score = 113 bits (242), Expect = 6e-024
Identities = 41/122 (33%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F D AW HS +EL +++G+ SG+ F +Q WCI
Sbjct: 688 LSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCID 867
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY VL+GK+ +
Sbjct: 868 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAA 1047
Query: 270 VE 265
+E
Sbjct: 1048 LE 1053
>ref|NM_102037.3| Arabidopsis thaliana unknown protein AT1G21890 mRNA, complete cds
Length = 1475
Score = 113 bits (242), Expect = 6e-024
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C++ TL+ + + D SAW+I L +SGV SGV +Y+Q +
Sbjct: 748 LSLTTLICLMGTLEGTAVSLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMR 927
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGD 286
RGP++ A F PLC VIT VL E +H+GS++G + +I GLY V+WGK D
Sbjct: 928 ERGPVFVATFNPLCVVITAALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKD 1092
>ref|NM_106203.3| Arabidopsis thaliana unknown protein AT1G75500 mRNA, complete cds
Length = 1729
Score = 113 bits (242), Expect = 6e-024
Identities = 41/122 (33%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F D AW HS +EL +++G+ SG+ F +Q WCI
Sbjct: 757 LSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCID 936
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY VL+GK+ +
Sbjct: 937 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYFVLYGKSEERKFAA 1116
Query: 270 VE 265
+E
Sbjct: 1117 LE 1122
>dbj|AK118732.1| Arabidopsis thaliana At3g30340 mRNA for unknown protein, complete
cds, clone: RAFL21-08-G06
Length = 1248
Score = 112 bits (239), Expect = 1e-023
Identities = 45/132 (34%), Positives = 78/132 (59%)
Frame = -2 / +2
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+QSALL S W + F++ ++SG+ GSG+ + SWC+ RG ++++ F P
Sbjct: 704 IQSALLSLISERSTSMWVVKDKFQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIP 883
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGGVEPEHHSADLEK 235
L V +F+ + L E+++ GS++G++ +I GLY++LWGK+ D + + E D+E
Sbjct: 884 LIQVFAAIFSFSFLHEQIYCGSVIGSMVIIVGLYILLWGKSKDKSASVTKQEPLDLDIEG 1063
Query: 234 XSSARSDPNSTA 199
+A + NSTA
Sbjct: 1064 CGTAPKELNSTA 1099
>ref|NM_113933.2| Arabidopsis thaliana unknown protein AT3G30340 mRNA, complete cds
Length = 1249
Score = 112 bits (239), Expect = 1e-023
Identities = 45/132 (34%), Positives = 78/132 (59%)
Frame = -2 / +2
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+QSALL S W + F++ ++SG+ GSG+ + SWC+ RG ++++ F P
Sbjct: 704 IQSALLSLISERSTSMWVVKDKFQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIP 883
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGGVEPEHHSADLEK 235
L V +F+ + L E+++ GS++G++ +I GLY++LWGK+ D + + E D+E
Sbjct: 884 LIQVFAAIFSFSFLHEQIYCGSVIGSMVIIVGLYILLWGKSKDKSASVTKQEPLDLDIEG 1063
Query: 234 XSSARSDPNSTA 199
+A + NSTA
Sbjct: 1064 CGTAPKELNSTA 1099
>emb|AX506955.1| Sequence 1650 from Patent WO0216655
Length = 1155
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 652 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 831
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 832 TRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1011
Query: 270 VE 265
++
Sbjct: 1012 LD 1017
>gb|BT005333.1| Arabidopsis thaliana At4g08290 mRNA, complete cds
Length = 1155
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 652 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 831
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 832 TRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1011
Query: 270 VE 265
++
Sbjct: 1012 LD 1017
>emb|AX651964.1| Sequence 850 from Patent WO03000898
Length = 1155
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 652 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 831
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 832 TRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1011
Query: 270 VE 265
++
Sbjct: 1012 LD 1017
>gb|AY088024.1| Arabidopsis thaliana clone 40485 mRNA, complete sequence
Length = 1441
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 834 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 1013
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 1014 TRGPVFVTAFNPLCMILVALLASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1193
Query: 270 VE 265
++
Sbjct: 1194 LD 1199
>dbj|AK118606.1| Arabidopsis thaliana At4g08290 mRNA for putative nodulin, complete
cds, clone: RAFL19-85-H13
Length = 1425
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 813 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 992
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 993 TRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1172
Query: 270 VE 265
++
Sbjct: 1173 LD 1178
>ref|NM_116898.2| Arabidopsis thaliana unknown protein AT4G08290 transcript variant
AT4G08290.1 mRNA, complete cds
Length = 1446
Score = 109 bits (232), Expect = 1e-022
Identities = 40/122 (32%), Positives = 71/122 (58%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 834 LSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMK 1013
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGG 271
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G
Sbjct: 1014 TRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSG 1193
Query: 270 VE 265
++
Sbjct: 1194 LD 1199
>ref|NM_125866.1| Arabidopsis thaliana unknown protein AT5G64700 mRNA, complete cds
Length = 1080
Score = 108 bits (230), Expect = 3e-022
Identities = 46/122 (37%), Positives = 73/122 (59%)
Frame = -2 / +1
Query: 636 SPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWC 457
S L + C+LS++QS ++ L D SAW++ L ++ G +GV +YLQSW
Sbjct: 646 SKLYFTTLHCLLSSIQSFVIAIALERDISAWKLGWNLRLVAVIYCGFIVTGVAYYLQSWV 825
Query: 456 ISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANK 277
I RGP++ +MF PL + T + +A +L E + +GS++G + +I GLY VLWGK+ +
Sbjct: 826 IEKRGPVFLSMFTPLSLLFTLLSSAILLCEIISLGSIVGGLLLIIGLYCVLWGKSREEKN 1005
Query: 276 GG 271
G
Sbjct: 1006 SG 1011
>gb|AV541840.1|AV541840 AV541840 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172b04F 3', mRNA sequence
Length = 605
Score = 107 bits (228), Expect = 5e-022
Identities = 39/121 (32%), Positives = 70/121 (57%)
Frame = -2 / -1
Query: 627 ALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISV 448
+LSA +C+ +QS + + PS W + L +++G+ SG+T+Y+Q +
Sbjct: 605 SLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMKT 426
Query: 447 RGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGGV 268
RGP++ F PLC ++ + A+ +L E++H G ++G + AGLY+V+WGK D G+
Sbjct: 425 RGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVWGKGKDYEVSGL 246
Query: 267 E 265
+
Sbjct: 245 D 243
>ref|NM_112703.3| Arabidopsis thaliana unknown protein AT3G18200 transcript variant
AT3G18200.1 mRNA, complete cds
Length = 1318
Score = 107 bits (228), Expect = 5e-022
Identities = 41/112 (36%), Positives = 71/112 (63%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L L+++ C +Q ++ F+ D + W I S EL +++G+ SG+ YLQ+WCI
Sbjct: 669 LTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIY 848
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
GP++ A+F+PL T++ A +L ++L+ G ++GA+ ++ GLY+VLWGK
Sbjct: 849 KSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYLVLWGK 1004
>ref|NM_001035644.1| Arabidopsis thaliana unknown protein AT3G18200 transcript variant
AT3G18200.2 mRNA, complete cds
Length = 1317
Score = 107 bits (228), Expect = 5e-022
Identities = 41/112 (36%), Positives = 71/112 (63%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L L+++ C +Q ++ F+ D + W I S EL +++G+ SG+ YLQ+WCI
Sbjct: 668 LTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIY 847
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
GP++ A+F+PL T++ A +L ++L+ G ++GA+ ++ GLY+VLWGK
Sbjct: 848 KSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYLVLWGK 1003
>emb|BX831593.1|CNS0A0XA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH17ZE03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1329
Score = 106 bits (227), Expect = 7e-022
Identities = 41/112 (36%), Positives = 68/112 (60%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C + TLQ+ + + +PSAWRI L +SG+ S +++Y+Q +
Sbjct: 662 LSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMK 841
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
RGP+++ F PL VI V + VL E++ +G ++GA+ ++ GLY VLWGK
Sbjct: 842 KRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGK 997
>emb|BX832761.1|CNS0A0Y9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH9ZB10 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1348
Score = 106 bits (227), Expect = 7e-022
Identities = 41/112 (36%), Positives = 68/112 (60%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C + TLQ+ + + +PSAWRI L +SG+ S +++Y+Q +
Sbjct: 676 LSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMK 855
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
RGP+++ F PL VI V + VL E++ +G ++GA+ ++ GLY VLWGK
Sbjct: 856 KRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGK 1011
>ref|NM_120787.2| Arabidopsis thaliana unknown protein AT5G07050 mRNA, complete cds
Length = 1349
Score = 106 bits (227), Expect = 7e-022
Identities = 41/112 (36%), Positives = 68/112 (60%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C + TLQ+ + + +PSAWRI L +SG+ S +++Y+Q +
Sbjct: 677 LSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMK 856
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
RGP+++ F PL VI V + VL E++ +G ++GA+ ++ GLY VLWGK
Sbjct: 857 KRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGK 1012
>gb|BP610300.1|BP610300 BP610300 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-10-M16 3',
mRNA sequence
Length = 455
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -2 / -1
Query: 513 CVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAI 334
C F ++F+LQ+W +S +GP++SA+F PL VI T F A L+E+ ++GSLLGA+
Sbjct: 443 CCIYSGFQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYLGSLLGAL 264
Query: 333 AVIAGLYVVLWGKAGD 286
A+I GLY+VLWGK+ D
Sbjct: 263 AIILGLYIVLWGKSED 216
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 525 ELSCCVFSG 499
+LSCC++SG
Sbjct: 452 KLSCCIYSG 426
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,308,098,898
Number of Sequences: 1013581
Number of extensions: 16550127
Number of successful extensions: 141016
Number of sequences better than 1.0e-020: 54
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 50721269324
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)