TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3562100.2.1
(759 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI996841.1|AI996841 701668691 A. thaliana, Columbia Col-... 188 2e-046
gb|CB263161.1|CB263161 32-E9779-008-018-P08-pbl2 MPIZ-ADIS-... 187 3e-046
gb|AY086303.1| Arabidopsis thaliana clone 23672 mRNA, compl... 187 3e-046
emb|BX813825.1|CNS0ADOW Arabidopsis thaliana Full-length cD... 187 3e-046
dbj|AK176692.1| Arabidopsis thaliana mRNA, complete cds, cl... 187 3e-046
dbj|AK176760.1| Arabidopsis thaliana mRNA, complete cds, cl... 187 3e-046
ref|NM_103466.3| Arabidopsis thaliana LCV2 AT1G43130 (LCV2)... 187 3e-046
gb|AV559028.1|AV559028 AV559028 Arabidopsis thaliana green ... 176 9e-043
gb|AY072447.1| Arabidopsis thaliana unknown protein (At2g20... 176 9e-043
gb|AY128911.1| Arabidopsis thaliana unknown protein (At2g20... 176 9e-043
gb|AY084942.1| Arabidopsis thaliana clone 12246 mRNA, compl... 176 9e-043
ref|NM_127571.2| Arabidopsis thaliana LCV1 AT2G20130 (LCV1)... 176 9e-043
gb|AV531552.1|AV531552 AV531552 Arabidopsis thaliana flower... 174 2e-042
gb|AY084984.1| Arabidopsis thaliana clone 123469 mRNA, comp... 174 2e-042
gb|AY170845.1| Arabidopsis thaliana putative membrane prote... 174 2e-042
emb|BX820138.1|CNS0A9EX Arabidopsis thaliana Full-length cD... 174 2e-042
ref|NM_127570.2| Arabidopsis thaliana COV1 (CONTINUOUS VASC... 174 2e-042
gb|AV785472.1|AV785472 AV785472 RAFL6 Arabidopsis thaliana ... 171 3e-041
gb|AF410324.1|AF410324 Arabidopsis thaliana At2g20120/T2G17... 171 3e-041
gb|AY093732.1| Arabidopsis thaliana At2g20120/T2G17.8 mRNA,... 171 3e-041
gb|AV544391.1|AV544391 AV544391 Arabidopsis thaliana roots ... 166 5e-040
gb|AV559198.1|AV559198 AV559198 Arabidopsis thaliana green ... 166 5e-040
ref|NM_127402.2| Arabidopsis thaliana LCV3 AT2G18460 (LCV3)... 160 3e-038
ref|NM_201755.1| Arabidopsis thaliana LCV3 AT2G18460 (LCV3)... 160 3e-038
emb|BX820903.1|CNS0A9OE Arabidopsis thaliana Full-length cD... 111 1e-037
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 95 2e-036
gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromoso... 95 2e-036
gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 B... 95 2e-036
gb|CW798252.1|CW798252 WiscDsLox397F06 Arabidopsis thaliana... 95 2e-034
gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G1... 82 4e-033
gb|AV538132.1|AV538132 AV538132 Arabidopsis thaliana roots ... 144 4e-033
gb|AV790003.1|AV790003 AV790003 RAFL6 Arabidopsis thaliana ... 137 5e-031
emb|BX820909.1|CNS0A9PK Arabidopsis thaliana Full-length cD... 109 6e-031
gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D... 136 9e-031
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 136 9e-031
gb|AV786450.1|AV786450 AV786450 RAFL6 Arabidopsis thaliana ... 120 2e-027
gb|BP572090.1|BP572090 BP572090 RAFL14 Arabidopsis thaliana... 117 4e-025
gb|AI998637.1|AI998637 701546406 A. thaliana, Columbia Col-... 116 6e-025
gb|BP581888.1|BP581888 BP581888 RAFL14 Arabidopsis thaliana... 114 4e-024
gb|BP630403.1|BP630403 BP630403 RAFL17 Arabidopsis thaliana... 111 4e-023
gb|BP630297.1|BP630297 BP630297 RAFL17 Arabidopsis thaliana... 109 9e-023
>gb|AI996841.1|AI996841 701668691 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701668691, mRNA sequence
Length = 551
Score = 188 bits (404), Expect = 2e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / -3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 468 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 289
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 288 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHXHSLRV 118
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / +2
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 173 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 352
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 353 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 454
>gb|CB263161.1|CB263161 32-E9779-008-018-P08-pbl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767P0818Q 5-PRIME, mRNA sequence
Length = 664
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 143 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 322
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 323 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 493
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -2
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 438 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 259
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 258 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 157
>gb|AY086303.1| Arabidopsis thaliana clone 23672 mRNA, complete sequence
Length = 995
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 483 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 662
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 663 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTANRTPHQHSLRV 833
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -2
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 778 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 599
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 598 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 497
>emb|BX813825.1|CNS0ADOW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB41ZB12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1277
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 454 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 633
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 634 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 804
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -1
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 749 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 570
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 569 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 468
>dbj|AK176692.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-23-L15
Length = 999
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 493 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 672
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 673 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 843
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -2
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 788 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 609
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 608 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 507
>dbj|AK176760.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-30-F01
Length = 995
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 493 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 672
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 673 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 843
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -1
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 788 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 609
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 608 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 507
>ref|NM_103466.3| Arabidopsis thaliana LCV2 AT1G43130 (LCV2) mRNA, complete cds
Length = 1304
Score = 187 bits (403), Expect = 3e-046
Identities = 80/117 (68%), Positives = 92/117 (78%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH
Sbjct: 483 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 662
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 663 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 833
Score = 134 bits (288), Expect = 2e-030
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -2
Query: 298 ITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTM 119
ITCGIVIP +T+IS+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV*
Sbjct: 778 ITCGIVIPTDTMISIPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV*SVT 599
Query: 118 VDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
DV+NPNAYSP RG* MIATSL A F S V
Sbjct: 598 DDVINPNAYSPIRG*RMIATSLKAVVFWSGEIAV 497
>gb|AV559028.1|AV559028 AV559028 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ109h08F 3', mRNA sequence
Length = 583
Score = 176 bits (378), Expect = 9e-043
Identities = 72/103 (69%), Positives = 84/103 (81%)
Frame = +3 / -1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 544 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 365
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 364 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 236
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / +3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 255 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 434
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 435 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 530
>gb|AY072447.1| Arabidopsis thaliana unknown protein (At2g20130) mRNA, complete cds
Length = 1084
Score = 176 bits (378), Expect = 9e-043
Identities = 72/103 (69%), Positives = 84/103 (81%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 569 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 748
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 749 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 877
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 858 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 679
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 678 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 583
>gb|AY128911.1| Arabidopsis thaliana unknown protein (At2g20130) mRNA, complete cds
Length = 850
Score = 176 bits (378), Expect = 9e-043
Identities = 72/103 (69%), Positives = 84/103 (81%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 430 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 609
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 610 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 738
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 719 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 540
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 539 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 444
>gb|AY084942.1| Arabidopsis thaliana clone 12246 mRNA, complete sequence
Length = 1111
Score = 176 bits (378), Expect = 9e-043
Identities = 72/103 (69%), Positives = 84/103 (81%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 616 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 795
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 796 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 924
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 905 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 726
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 725 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 630
>ref|NM_127571.2| Arabidopsis thaliana LCV1 AT2G20130 (LCV1) mRNA, complete cds
Length = 1203
Score = 176 bits (378), Expect = 9e-043
Identities = 72/103 (69%), Positives = 84/103 (81%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 616 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 795
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 796 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 924
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 905 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 726
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 725 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 630
>gb|AV531552.1|AV531552 AV531552 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB025g07F 3', mRNA sequence
Length = 602
Score = 174 bits (375), Expect = 2e-042
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3 / -2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 562 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 383
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 382 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 254
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / +3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 273 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 452
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 453 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 548
>gb|AY084984.1| Arabidopsis thaliana clone 123469 mRNA, complete sequence
Length = 1165
Score = 174 bits (375), Expect = 2e-042
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 609 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 788
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 789 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 917
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -1
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 898 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 719
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 718 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 623
>gb|AY170845.1| Arabidopsis thaliana putative membrane protein COV (COV) mRNA,
complete cds
Length = 1127
Score = 174 bits (375), Expect = 2e-042
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 588 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 767
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 768 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 896
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 877 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 698
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 697 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 602
>emb|BX820138.1|CNS0A9EX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS78ZH10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1014
Score = 174 bits (375), Expect = 2e-042
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 526 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 705
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 706 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 834
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 815 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 636
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 635 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 540
>ref|NM_127570.2| Arabidopsis thaliana COV1 (CONTINUOUS VASCULAR RING) AT2G20120
(COV1) mRNA, complete cds
Length = 1170
Score = 174 bits (375), Expect = 2e-042
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH
Sbjct: 609 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 788
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 789 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 917
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 898 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RWFVGTYTQQSSSSVG*FWRTTVD 719
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 718 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 623
>gb|AV785472.1|AV785472 AV785472 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-16-K21 3',
mRNA sequence
Length = 702
Score = 171 bits (367), Expect = 3e-041
Identities = 70/103 (67%), Positives = 83/103 (80%)
Frame = +3 / -3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTN
Sbjct: 460 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNR 281
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 280 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 152
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / +3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 171 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RRFVGTYTQQSSSSVG*FWRTTVD 350
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 351 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 446
>gb|AF410324.1|AF410324 Arabidopsis thaliana At2g20120/T2G17.8 mRNA, complete cds
Length = 1069
Score = 171 bits (367), Expect = 3e-041
Identities = 70/103 (67%), Positives = 83/103 (80%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTN
Sbjct: 610 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNR 789
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 790 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 918
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -3
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 899 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RRFVGTYTQQSSSSVG*FWRTTVD 720
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 719 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 624
>gb|AY093732.1| Arabidopsis thaliana At2g20120/T2G17.8 mRNA, complete cds
Length = 807
Score = 171 bits (367), Expect = 3e-041
Identities = 70/103 (67%), Positives = 83/103 (80%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTN
Sbjct: 460 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNR 639
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 640 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 768
Score = 104 bits (221), Expect = 4e-021
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPET IS+PSR ++ GLI S T +SP+ + VGT T +SSS RT VD
Sbjct: 749 CGIDIPPETTISIPSRTERFGLITSLLLTSSISPM*RRFVGTYTQQSSSSVG*FWRTTVD 570
Query: 112 VMNPNAYSPTRG*LMIATSLNAXXFXSXXXXV 17
VM PNAYSPTRG LMIATSL A F S V
Sbjct: 569 VMKPNAYSPTRGCLMIATSLKACVF*SGDMAV 474
>gb|AV544391.1|AV544391 AV544391 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ42a07F 3', mRNA sequence
Length = 447
Score = 166 bits (358), Expect = 5e-040
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = +3 / -3
Query: 48 AFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEII 227
AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNHLYIGDI LVNS ++I
Sbjct: 445 AFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVI 266
Query: 228 RPNLSIREGIEIIVSGGMTMPQVIMSLE 311
RPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 265 RPNLSVREGIEIVVSGGMSMPQILSTVD 182
>gb|AV559198.1|AV559198 AV559198 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ112h04F 3', mRNA sequence
Length = 486
Score = 166 bits (358), Expect = 5e-040
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = +3 / -2
Query: 48 AFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEII 227
AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNHLYIGDI LVNS ++I
Sbjct: 485 AFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVI 306
Query: 228 RPNLSIREGIEIIVSGGMTMPQVIMSLE 311
RPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 305 RPNLSVREGIEIVVSGGMSMPQILSTVD 222
>ref|NM_127402.2| Arabidopsis thaliana LCV3 AT2G18460 (LCV3) transcript variant
AT2G18460.1 mRNA, complete cds
Length = 851
Score = 160 bits (345), Expect = 3e-038
Identities = 62/93 (66%), Positives = 80/93 (86%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D + AFKEVAII HP +GEYAFGFITST++L+ G EELC VYVPTNHLY+GDIFL++
Sbjct: 460 DQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLIS 639
Query: 213 SAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
S +IIRPNLS+REGIEI++SGGM++P ++ +L+
Sbjct: 640 SKDIIRPNLSVREGIEIVISGGMSIPHMLTTLD 738
Score = 106 bits (227), Expect = 6e-022
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = -3 / -1
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPE ISMPSR ++LGL++S E +KMSP + LVGT*T H+SS P R VD
Sbjct: 719 CGIDIPPEMTISMPSRTERLGLMMSFELMRKMSPR*RWLVGT*TQHSSSPPARPRRITVD 540
Query: 112 VMNPNAYSPTRG*LMIATSLNA 47
VM P AYSP G L+IATSLNA
Sbjct: 539 VMKPKAYSPI*GCLIIATSLNA 474
>ref|NM_201755.1| Arabidopsis thaliana LCV3 AT2G18460 (LCV3) transcript variant
AT2G18460.2 mRNA, complete cds
Length = 807
Score = 160 bits (345), Expect = 3e-038
Identities = 62/93 (66%), Positives = 80/93 (86%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D + AFKEVAII HP +GEYAFGFITST++L+ G EELC VYVPTNHLY+GDIFL++
Sbjct: 454 DQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLIS 633
Query: 213 SAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
S +IIRPNLS+REGIEI++SGGM++P ++ +L+
Sbjct: 634 SKDIIRPNLSVREGIEIVISGGMSIPHMLTTLD 732
Score = 106 bits (227), Expect = 6e-022
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = -3 / -2
Query: 292 CGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVD 113
CGI IPPE ISMPSR ++LGL++S E +KMSP + LVGT*T H+SS P R VD
Sbjct: 713 CGIDIPPEMTISMPSRTERLGLMMSFELMRKMSPR*RWLVGT*TQHSSSPPARPRRITVD 534
Query: 112 VMNPNAYSPTRG*LMIATSLNA 47
VM P AYSP G L+IATSLNA
Sbjct: 533 VMKPKAYSPI*GCLIIATSLNA 468
>emb|BX820903.1|CNS0A9OE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH7ZG10 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1445
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 43/62 (69%), Positives = 54/62 (87%)
Frame = +3 / +1
Query: 126 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMS 305
LQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +
Sbjct: 1102 LQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILST 1281
Query: 306 LE 311
++
Sbjct: 1282 VD 1287
Score = 68.0 bits (142), Expect(2) = 1e-037
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDK 140
D N AFKEVAII HPRVGEYAFGFITST+VLQ +
Sbjct: 883 DQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQVSE 990
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 95.5 bits (202), Expect(3) = 2e-036
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3 / -1
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTD G+EELCSVYVPTNHLYIGD+FLV+S EIIRPNLSIREGI
Sbjct: 715322 QTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 715194
Score = 65.2 bits (136), Expect(3) = 7e-023
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -3 / +1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV
Sbjct: 715195 IPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV 715320
Score = 63.8 bits (133), Expect(3) = 2e-036
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITS++ LQ
Sbjct: 715501 DQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQ 715403
Score = 49.2 bits (101), Expect(3) = 7e-023
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2 / +2
Query: 155 QFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
QF LK H *C +SKC+FTNT +T+DCY F+ + +
Sbjct: 715379 QFCC*ITDLKCHR*CNKSKCVFTNTRVTDDCYLFKGSSVLV 715501
Score = 33.6 bits (67), Expect(3) = 2e-036
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3 / -3
Query: 249 EGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
+ EIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 715113 DATEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 715009
Score = 32.2 bits (64), Expect(3) = 7e-023
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 298 ITCGIVIPPETIISMPSR 245
ITCGIVIP +T+IS+ S+
Sbjct: 715064 ITCGIVIPTDTMISVASK 715117
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM,
complete sequence
Length = 129271
Score = 95.5 bits (202), Expect(3) = 2e-036
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3 / -3
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTD G+EELCSVYVPTNHLYIGD+FLV+S EIIRPNLSIREGI
Sbjct: 998 QTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 870
Score = 65.2 bits (136), Expect(3) = 8e-023
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -3 / +1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV
Sbjct: 871 IPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV 996
Score = 63.8 bits (133), Expect(3) = 2e-036
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITS++ LQ
Sbjct: 1177 DQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQ 1079
Score = 49.2 bits (101), Expect(3) = 8e-023
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2 / +2
Query: 155 QFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
QF LK H *C +SKC+FTNT +T+DCY F+ + +
Sbjct: 1055 QFCC*ITDLKCHR*CNKSKCVFTNTRVTDDCYLFKGSSVLV 1177
Score = 33.6 bits (67), Expect(3) = 2e-036
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3 / -2
Query: 249 EGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
+ EIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 789 DATEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 685
Score = 32.2 bits (64), Expect(3) = 8e-023
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 298 ITCGIVIPPETIISMPSR 245
ITCGIVIP +T+IS+ S+
Sbjct: 740 ITCGIVIPTDTMISVASK 793
>gb|AC026757.12|AC026757 Arabidopsis thaliana chromosome 1 BAC F2H10 genomic sequence, complete
sequence
Length = 95870
Score = 95.5 bits (202), Expect(3) = 2e-036
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3 / -1
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTD G+EELCSVYVPTNHLYIGD+FLV+S EIIRPNLSIREGI
Sbjct: 91868 QTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 91740
Score = 65.2 bits (136), Expect(3) = 8e-023
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -3 / +1
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV
Sbjct: 91741 IPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV 91866
Score = 63.8 bits (133), Expect(3) = 2e-036
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3 / -2
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N AFKEVAII HPR+GEYAFGFITS++ LQ
Sbjct: 92047 DQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQ 91949
Score = 49.2 bits (101), Expect(3) = 8e-023
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2 / +2
Query: 155 QFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
QF LK H *C +SKC+FTNT +T+DCY F+ + +
Sbjct: 91925 QFCC*ITDLKCHR*CNKSKCVFTNTRVTDDCYLFKGSSVLV 92047
Score = 33.6 bits (67), Expect(3) = 2e-036
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3 / -3
Query: 249 EGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
+ EIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 91659 DATEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 91555
Score = 32.2 bits (64), Expect(3) = 8e-023
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 298 ITCGIVIPPETIISMPSR 245
ITCGIVIP +T+IS+ S+
Sbjct: 91610 ITCGIVIPTDTMISVASK 91663
>gb|CW798252.1|CW798252 WiscDsLox397F06 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 1132
Score = 95.5 bits (202), Expect(3) = 2e-034
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3 / -2
Query: 129 QTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
QTD G+EELCSVYVPTNHLYIGD+FLV+S EIIRPNLSIREGI
Sbjct: 690 QTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 562
Score = 65.2 bits (136), Expect(3) = 2e-021
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -3 / +2
Query: 256 MPSRIDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV 131
+PSRIDK GL+IS+ T+ SP+Y+* VGT TLHNSSSP SV
Sbjct: 563 IPSRIDKFGLMISSLLTRNTSPMYR*FVGTYTLHNSSSPWSV 688
Score = 57.4 bits (119), Expect(3) = 2e-034
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +3 / -3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQ 131
D N A KE AII HPR+GEYAFGFITS+ LQ
Sbjct: 869 DQNTTAXKEXAIIRHPRIGEYAFGFITSSXTLQ 771
Score = 44.6 bits (91), Expect(3) = 2e-021
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 115 DVMNPNAYSPTRG*LMIATSLNAXXFXS 32
DV+NPNAYSP RG* MIA SL A F S
Sbjct: 787 DVINPNAYSPIRG*RMIAXSLXAVVFWS 870
Score = 33.6 bits (67), Expect(3) = 2e-034
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3 / -1
Query: 249 EGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353
+ EIIVS GMTMPQVI ++ T ++ + RV
Sbjct: 481 DATEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 377
Score = 32.2 bits (64), Expect(3) = 2e-021
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 298 ITCGIVIPPETIISMPSR 245
ITCGIVIP +T+IS+ S+
Sbjct: 432 ITCGIVIPTDTMISVASK 485
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete
sequence
Length = 97814
Score = 82.2 bits (173), Expect(3) = 4e-033
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 126 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
LQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGI
Sbjct: 30826 LQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 30957
Score = 82.2 bits (173), Expect(3) = 2e-028
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 126 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGI 257
LQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGI
Sbjct: 27786 LQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 27917
Score = 68.0 bits (142), Expect(3) = 4e-033
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDK 140
D N AFKEVAII HPRVGEYAFGFITST+VLQ +
Sbjct: 30607 DQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQVSE 30714
Score = 68.0 bits (142), Expect(3) = 2e-028
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDK 140
D N AFKEVAII HPRVGEYAFGFITST+VLQ +
Sbjct: 27552 DQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQVSE 27659
Score = 33.1 bits (66), Expect(3) = 2e-028
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 258 EIIVSGGMTMPQVIMSLE 311
EI+VSGGM+MPQ++ +L+
Sbjct: 28032 EIVVSGGMSMPQILSTLD 28085
Score = 31.8 bits (63), Expect(3) = 4e-033
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 258 EIIVSGGMTMPQVIMSLE 311
EI+VSGGM+MPQ++ +++
Sbjct: 31072 EIVVSGGMSMPQILSTVD 31125
>gb|AV538132.1|AV538132 AV538132 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ110c07F 3', mRNA sequence
Length = 464
Score = 144 bits (308), Expect = 4e-033
Identities = 57/77 (74%), Positives = 69/77 (89%)
Frame = +3 / -3
Query: 81 RVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIE 260
RVGEYAFGFITST+VLQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIE
Sbjct: 462 RVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIE 283
Query: 261 IIVSGGMTMPQVIMSLE 311
I+VSGGM+MPQ++ +++
Sbjct: 282 IVVSGGMSMPQILSTVD 232
>gb|AV790003.1|AV790003 AV790003 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-86-L17 3',
mRNA sequence
Length = 428
Score = 137 bits (293), Expect = 5e-031
Identities = 54/75 (72%), Positives = 66/75 (88%)
Frame = +3 / -3
Query: 87 GEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEII 266
GEYAFGFITST+VLQ +EELC VYVPTNHLYIGDI LVNS ++I PNLS+REGIEI+
Sbjct: 426 GEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVISPNLSVREGIEIV 247
Query: 267 VSGGMTMPQVIMSLE 311
VSGGM+MPQ++ +++
Sbjct: 246 VSGGMSMPQILSTVD 202
>emb|BX820909.1|CNS0A9PK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH80ZE08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1333
Score = 109 bits (233), Expect(2) = 6e-031
Identities = 41/56 (73%), Positives = 52/56 (92%)
Frame = +3 / +3
Query: 144 DEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
+EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++
Sbjct: 945 EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 1112
Score = 50.1 bits (103), Expect(2) = 6e-031
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDK 140
D N A KEV II HPR G+ AFG ITST+VL+ K
Sbjct: 709 D*NTQALKEVEIIRHPREGKNAFGLITSTVVLKVSK 816
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
sequence
Length = 92861
Score = 136 bits (291), Expect = 9e-031
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +3 / -3
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D + AFKEVAII HP +GEYAFGFITST++L+ G EELC VYVPTNHLY+GDIFL++
Sbjct: 13188 DQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLIS 13009
Query: 213 SAEIIRPNLSIREGI 257
S +IIRPNLS+REGI
Sbjct: 13008 SKDIIRPNLSVREGI 12964
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 136 bits (291), Expect = 9e-031
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +3 / +1
Query: 33 DXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 212
D + AFKEVAII HP +GEYAFGFITST++L+ G EELC VYVPTNHLY+GDIFL++
Sbjct: 8009359 DQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLIS 8009538
Query: 213 SAEIIRPNLSIREGI 257
S +IIRPNLS+REGI
Sbjct: 8009539 SKDIIRPNLSVREGI 8009583
>gb|AV786450.1|AV786450 AV786450 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-71-H23 3',
mRNA sequence
Length = 456
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3 / -2
Query: 87 GEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEII 266
GEYAFGFITST+ LQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIEI+
Sbjct: 446 GEYAFGFITSTVFLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIV 267
Query: 267 VSG 275
VSG
Sbjct: 266 VSG 258
Score = 24.4 bits (47), Expect(2) = 2e-027
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = +3 / -3
Query: 255 IEIIVSGGMTMPQVIMSLE 311
+ ++ GGM+MPQ++ +++
Sbjct: 277 LRLLFRGGMSMPQILSTVD 221
>gb|BP572090.1|BP572090 BP572090 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-K23 3',
mRNA sequence
Length = 443
Score = 117 bits (250), Expect = 4e-025
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +3 / -1
Query: 114 STMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQ 293
ST+VLQ +EELC VY+PTNHLYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ
Sbjct: 443 STVVLQNYPTEEELCCVYLPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQ 264
Query: 294 VIMSLE 311
++ +L+
Sbjct: 263 ILSTLD 246
>gb|AI998637.1|AI998637 701546406 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701546406, mRNA sequence
Length = 478
Score = 116 bits (249), Expect = 6e-025
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = +3 / -2
Query: 114 STMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQ 293
ST+VLQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLS REGIEI+VSGGM+MPQ
Sbjct: 477 STVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSXREGIEIVVSGGMSMPQ 298
Query: 294 VIMSLE 311
++ +L+
Sbjct: 297 ILSTLD 280
>gb|BP581888.1|BP581888 BP581888 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-33-N05 3',
mRNA sequence
Length = 449
Score = 114 bits (243), Expect = 4e-024
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +3 / -2
Query: 108 ITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTM 287
ITST+VLQ +EELC VYVPTNHLYIGDI L +S ++IRPNLS+REGIEI+VS GM+M
Sbjct: 448 ITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLFDSNDVIRPNLSVREGIEIVVSVGMSM 269
Query: 288 PQVIMSLE 311
PQ++ +L+
Sbjct: 268 PQILSTLD 245
>gb|BP630403.1|BP630403 BP630403 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-20-A16 3',
mRNA sequence
Length = 418
Score = 111 bits (236), Expect = 4e-023
Identities = 42/56 (75%), Positives = 52/56 (92%)
Frame = +3 / -2
Query: 144 DEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
+EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+
Sbjct: 408 EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 241
>gb|BP630297.1|BP630297 BP630297 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-19-K04 3',
mRNA sequence
Length = 364
Score = 109 bits (233), Expect = 9e-023
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +3 / -3
Query: 144 DEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311
+EELC VYVPTNHLYIGDI LVNS ++IRPNLS+REGIEI VSGGM+MPQ++ +L+
Sbjct: 350 EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIFVSGGMSMPQILSTLD 183
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,513,903,791
Number of Sequences: 1013581
Number of extensions: 21989180
Number of successful extensions: 145254
Number of sequences better than 1.0e-020: 47
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 48259071784
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)