TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3510875.2.1
(707 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AQ958747.1|AQ958747 LERAZ48TF LERA Arabidopsis thaliana ... 113 7e-032
dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosom... 110 4e-031
ref|NM_124281.1| Arabidopsis thaliana unknown protein AT5G4... 110 4e-031
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 119 6e-030
gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BA... 112 7e-030
gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BA... 112 7e-030
dbj|AK117899.1| Arabidopsis thaliana At1g58170 mRNA for unk... 112 7e-030
ref|NM_104598.2| Arabidopsis thaliana unknown protein AT1G5... 112 7e-030
gb|AU238736.1|AU238736 AU238736 RAFL19 Arabidopsis thaliana... 112 7e-030
gb|BT003709.1| Arabidopsis thaliana At1g58170 mRNA, complet... 112 7e-030
dbj|AK117592.1| Arabidopsis thaliana At3g58090 mRNA for unk... 133 8e-030
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 133 8e-030
emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome... 133 8e-030
emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome ... 133 8e-030
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 133 8e-030
ref|NM_179678.2| Arabidopsis thaliana unknown protein AT2G2... 95 5e-029
gb|BT005788.1| Arabidopsis thaliana clone RAFL14-86-C14 (R2... 95 5e-029
gb|BT015116.1| Arabidopsis thaliana At2g21100 gene, complet... 95 5e-029
gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 B... 115 8e-029
ref|NM_104394.3| Arabidopsis thaliana unknown protein AT1G5... 115 9e-029
gb|AY128336.1| Arabidopsis thaliana unknown protein (At1g55... 115 9e-029
gb|CF651800.1|CF651800 15-L020579-066-004-N03-SP6P MPIZ-ADI... 115 9e-029
gb|BX840539.1|BX840539 BX840539 Arabidopsis thaliana Siliqu... 115 9e-029
gb|CB264511.1|CB264511 54-E015022-035-004-K14-T7R MPIZ-ADIS... 115 9e-029
gb|BT015679.1| Arabidopsis thaliana At1g55210 gene, complet... 115 9e-029
dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosom... 115 1e-027
ref|NM_112211.2| Arabidopsis thaliana unknown protein AT3G1... 113 1e-027
dbj|AK118030.1| Arabidopsis thaliana At3g13650 mRNA for put... 113 1e-027
emb|BX821492.1|CNS0A97B Arabidopsis thaliana Full-length cD... 91 1e-027
gb|AU238879.1|AU238879 AU238879 RAFL19 Arabidopsis thaliana... 113 1e-027
gb|AV552494.1|AV552494 AV552494 Arabidopsis thaliana roots ... 113 1e-027
gb|BT010587.1| Arabidopsis thaliana At3g13650 gene, complet... 113 1e-027
gb|AV560017.1|AV560017 AV560017 Arabidopsis thaliana green ... 115 2e-027
emb|BX825189.1|CNS0A52C Arabidopsis thaliana Full-length cD... 115 5e-027
ref|NM_112212.2| Arabidopsis thaliana unknown protein AT3G1... 115 5e-027
gb|BT015420.1| Arabidopsis thaliana At3g13660 gene, complet... 115 5e-027
ref|NM_112213.1| Arabidopsis thaliana unknown protein AT3G1... 113 1e-026
emb|BX824617.1|CNS0A65M Arabidopsis thaliana Full-length cD... 113 3e-026
gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsi... 119 1e-025
ref|NM_105259.1| Arabidopsis thaliana unknown protein AT1G6... 119 1e-025
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 119 1e-025
gb|AI995152.1|AI995152 701502370 A. thaliana, Ohio State cl... 106 1e-025
gb|AV554605.1|AV554605 AV554605 Arabidopsis thaliana roots ... 106 1e-025
gb|AY201177.1|AY201177 AY201177 Arabidopsis thaliana Landsb... 117 3e-025
gb|AV782353.1|AV782353 AV782353 RAFL4 Arabidopsis thaliana ... 115 1e-024
gb|AV542161.1|AV542161 AV542161 Arabidopsis thaliana roots ... 115 1e-024
gb|AV556495.1|AV556495 AV556495 Arabidopsis thaliana green ... 115 1e-024
gb|BT015654.1| Arabidopsis thaliana At3g13660 gene, complet... 115 2e-024
gb|AV531068.1|AV531068 AV531068 Arabidopsis thaliana flower... 112 1e-023
gb|AV544434.1|AV544434 AV544434 Arabidopsis thaliana roots ... 112 1e-023
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 110 6e-023
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 110 6e-023
gb|AC006264.4| Arabidopsis thaliana chromosome 2 clone F26H... 88 1e-022
ref|NM_127681.1| Arabidopsis thaliana unknown protein AT2G2... 88 2e-022
gb|AV825224.1|AV825224 AV825224 RAFL6 Arabidopsis thaliana ... 105 1e-021
gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, c... 105 1e-021
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 105 1e-021
gb|AY093095.1| Arabidopsis thaliana unknown protein (At5g42... 105 1e-021
emb|AX412349.1| Sequence 113 from Patent WO0222675 105 1e-021
gb|BT008442.1| Arabidopsis thaliana At5g42500 gene, complet... 105 1e-021
gb|BT010483.1| Arabidopsis thaliana At1g22900 gene, complet... 105 1e-021
dbj|AB016888.1| Arabidopsis thaliana genomic DNA, chromosom... 105 1e-021
dbj|AK176442.1| Arabidopsis thaliana mRNA for putative dise... 105 1e-021
ref|NM_123615.2| Arabidopsis thaliana unknown protein AT5G4... 105 1e-021
ref|NM_102137.2| Arabidopsis thaliana unknown protein AT1G2... 105 1e-021
emb|AL760231.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 1e-021
emb|AL760232.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 1e-021
gb|AV790643.1|AV790643 AV790643 RAFL6 Arabidopsis thaliana ... 103 7e-021
gb|CB252840.1|CB252840 16-E010699-019-002-P04-T7R MPIZ-ADIS... 89 1e-020
>gb|AQ958747.1|AQ958747 LERAZ48TF LERA Arabidopsis thaliana genomic clone LERAZ48, DNA
sequence
Length = 664
Score = 113 bits (241), Expect(2) = 7e-032
Identities = 49/87 (56%), Positives = 60/87 (68%)
Frame = -2 / -3
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q+ GLLM MN F G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 389 TVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSG 210
Query: 361 KFRMARGYVQAHTIDSGATSGTTVVQY 281
FR ARGYV+A T +G V+Y
Sbjct: 209 MFRFARGYVEARTKLFDMKTGDATVEY 129
Score = 46.4 bits (95), Expect(2) = 7e-032
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
LT VY+HD+V G NP+++RI FG++ ID+ LT
Sbjct: 548 LTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSLYFGSITMIDNALT 411
>dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E20
Length = 61712
Score = 110 bits (234), Expect(2) = 4e-031
Identities = 46/73 (63%), Positives = 55/73 (75%)
Frame = -2 / -1
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q+ GLLM MN F G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 59024 TVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSG 58845
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 58844 MFRFARGYVEART 58806
Score = 46.9 bits (96), Expect(2) = 4e-031
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
LT VY+HD+V G NP+++RI FG++ ID+ LT
Sbjct: 59183 LTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALT 59046
>ref|NM_124281.1| Arabidopsis thaliana unknown protein AT5G49040 mRNA, complete cds
Length = 576
Score = 110 bits (234), Expect(2) = 4e-031
Identities = 46/73 (63%), Positives = 55/73 (75%)
Frame = -2 / +1
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q+ GLLM MN F G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 292 TVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSG 471
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 472 MFRFARGYVEART 510
Score = 46.9 bits (96), Expect(2) = 4e-031
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
LT VY+HD+V G NP+++RI FG++ ID+ LT
Sbjct: 133 LTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALT 270
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 119 bits (254), Expect = 1e-025
Identities = 54/108 (50%), Positives = 66/108 (61%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D T EVGRAQG Y ADQ GLLM N VFT G+ + ST+++ GR
Sbjct: 8745175 LVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGR 8745354
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VLS VREM I+GG+G FR RGY A T+ TSG VV+Y V +
Sbjct: 8745355 NPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYI 8745498
Score = 115 bits (246), Expect(2) = 8e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 4957822 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 4957643
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 4957642 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 4957502
Score = 112 bits (239), Expect(2) = 6e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 5895908 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 5896087
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 5896088 RFARGYVQASTHEFNLKTGNAIVEY 5896162
Score = 40.5 bits (82), Expect(2) = 6e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 5895743 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 5895889
Score = 33.6 bits (67), Expect(2) = 8e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 4957924 LTHFKVYWHDILSGPNPTSIMI 4957859
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete
sequence
Length = 103637
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 98324 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 98503
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 98504 RFARGYVQASTHEFNLKTGNAIVEY 98578
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 98159 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 98305
>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete
sequence
Length = 85961
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 25946 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 26125
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 26126 RFARGYVQASTHEFNLKTGNAIVEY 26200
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 25781 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 25927
>dbj|AK117899.1| Arabidopsis thaliana At1g58170 mRNA for unknown protein, complete
cds, clone: RAFL19-08-C03
Length = 709
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 340 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 519
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 520 RFARGYVQASTHEFNLKTGNAIVEY 594
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 175 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 321
>ref|NM_104598.2| Arabidopsis thaliana unknown protein AT1G58170 mRNA, complete cds
Length = 709
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 340 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 519
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 520 RFARGYVQASTHEFNLKTGNAIVEY 594
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 175 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 321
>gb|AU238736.1|AU238736 AU238736 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-08-C03 5',
mRNA sequence
Length = 637
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 340 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 519
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 520 RFARGYVQASTHEFNLKTGNAIVEY 594
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 175 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 321
>gb|BT003709.1| Arabidopsis thaliana At1g58170 mRNA, complete cds
Length = 558
Score = 112 bits (239), Expect(2) = 7e-030
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 280 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 459
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 460 RFARGYVQASTHEFNLKTGNAIVEY 534
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
LT VY+HD+V G + ++V I FG + ID+PLT P
Sbjct: 115 LTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTP 261
>dbj|AK117592.1| Arabidopsis thaliana At3g58090 mRNA for unknown protein, complete
cds, clone: RAFL17-23-O11
Length = 1232
Score = 133 bits (284), Expect = 8e-030
Identities = 57/108 (52%), Positives = 69/108 (63%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D + T EVGRAQG + ADQ FGLLM NFVFT GE +GST+S+ GR
Sbjct: 740 MVAVVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 919
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + S VREM I+GG+G FR RGY QA T TSG VV+Y V +
Sbjct: 920 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 1063
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 133 bits (284), Expect = 8e-030
Identities = 57/108 (52%), Positives = 69/108 (63%)
Frame = -2 / -2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D + T EVGRAQG + ADQ FGLLM NFVFT GE +GST+S+ GR
Sbjct: 21471356 MVAVVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 21471177
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + S VREM I+GG+G FR RGY QA T TSG VV+Y V +
Sbjct: 21471176 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 21471033
Score = 115 bits (245), Expect = 2e-024
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 4457488 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 4457667
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 4457668 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 4457808
Score = 113 bits (242), Expect = 5e-024
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 4455580 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 4455759
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 4455760 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 4455912
Score = 113 bits (241), Expect = 7e-024
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -2 / +3
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q G LMVMNF FT G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 4459671 TVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSG 4459850
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 4459851 IFRFARGYVEART 4459889
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17
Length = 109016
Score = 133 bits (284), Expect = 8e-030
Identities = 57/108 (52%), Positives = 69/108 (63%)
Frame = -2 / -2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D + T EVGRAQG + ADQ FGLLM NFVFT GE +GST+S+ GR
Sbjct: 107890 MVAVVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 107711
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + S VREM I+GG+G FR RGY QA T TSG VV+Y V +
Sbjct: 107710 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 107567
>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24
Length = 105306
Score = 133 bits (284), Expect = 8e-030
Identities = 57/108 (52%), Positives = 69/108 (63%)
Frame = -2 / -3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D + T EVGRAQG + ADQ FGLLM NFVFT GE +GST+S+ GR
Sbjct: 11053 MVAVVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 10874
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + S VREM I+GG+G FR RGY QA T TSG VV+Y V +
Sbjct: 10873 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 10730
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 133 bits (284), Expect = 8e-030
Identities = 57/108 (52%), Positives = 69/108 (63%)
Frame = -2 / -3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D + T EVGRAQG + ADQ FGLLM NFVFT GE +GST+S+ GR
Sbjct: 21523788 MVAVVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 21523609
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N + S VREM I+GG+G FR RGY QA T TSG VV+Y V +
Sbjct: 21523608 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 21523465
Score = 115 bits (245), Expect = 2e-024
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 4465187 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 4465366
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 4465367 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 4465507
Score = 113 bits (242), Expect = 5e-024
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 4463279 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 4463458
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 4463459 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 4463611
Score = 113 bits (241), Expect = 7e-024
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -2 / +1
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q G LMVMNF FT G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 4467370 TVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSG 4467549
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 4467550 IFRFARGYVEART 4467588
>ref|NM_179678.2| Arabidopsis thaliana unknown protein AT2G21100 mRNA, complete cds
Length = 734
Score = 95.5 bits (202), Expect(2) = 5e-029
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y + ++ GL+M M+F F G + ST+S++G+N ++ +REM IVGG+G F
Sbjct: 357 VGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 536
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
RMARGY A T +G +V Y V +
Sbjct: 537 RMARGYAIARTNWFDPKTGDAIVGYNVTI 623
Score = 54.7 bits (113), Expect(2) = 5e-029
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
+T + YFHD ++G NPTAV++AQ FGAV +DD LT
Sbjct: 192 VTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALT 329
>gb|BT005788.1| Arabidopsis thaliana clone RAFL14-86-C14 (R20165) putative disease
resistance response protein/dirigent protein (At2g21100)
mRNA, complete cds
Length = 715
Score = 95.5 bits (202), Expect(2) = 5e-029
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y + ++ GL+M M+F F G + ST+S++G+N ++ +REM IVGG+G F
Sbjct: 357 VGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 536
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
RMARGY A T +G +V Y V +
Sbjct: 537 RMARGYAIARTNWFDPKTGDAIVGYNVTI 623
Score = 54.7 bits (113), Expect(2) = 5e-029
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
+T + YFHD ++G NPTAV++AQ FGAV +DD LT
Sbjct: 192 VTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALT 329
>gb|BT015116.1| Arabidopsis thaliana At2g21100 gene, complete cds
Length = 564
Score = 95.5 bits (202), Expect(2) = 5e-029
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y + ++ GL+M M+F F G + ST+S++G+N ++ +REM IVGG+G F
Sbjct: 289 VGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 468
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
RMARGY A T +G +V Y V +
Sbjct: 469 RMARGYAIARTNWFDPKTGDAIVGYNVTI 555
Score = 54.7 bits (113), Expect(2) = 5e-029
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
+T + YFHD ++G NPTAV++AQ FGAV +DD LT
Sbjct: 124 VTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALT 261
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete
sequence
Length = 101954
Score = 115 bits (246), Expect(2) = 8e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 80032 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 80211
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 80212 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 80352
Score = 33.6 bits (67), Expect(2) = 8e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 79930 LTHFKVYWHDILSGPNPTSIMI 79995
>ref|NM_104394.3| Arabidopsis thaliana unknown protein AT1G55210 mRNA, complete cds
Length = 840
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 320 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 499
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 500 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 640
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 218 LTHFKVYWHDILSGPNPTSIMI 283
>gb|AY128336.1| Arabidopsis thaliana unknown protein (At1g55210) mRNA, complete cds
Length = 695
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 289 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 468
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 469 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 609
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 187 LTHFKVYWHDILSGPNPTSIMI 252
>gb|CF651800.1|CF651800 15-L020579-066-004-N03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N034Q 5-PRIME, mRNA sequence
Length = 689
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 261 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 440
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 441 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 581
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 159 LTHFKVYWHDILSGPNPTSIMI 224
>gb|BX840539.1|BX840539 BX840539 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL64ZC11 5PRIM, mRNA sequence
Length = 679
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 261 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 440
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 441 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 581
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 159 LTHFKVYWHDILSGPNPTSIMI 224
>gb|CB264511.1|CB264511 54-E015022-035-004-K14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000K144Q 5-PRIME, mRNA sequence
Length = 603
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 196 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 375
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 376 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 516
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 94 LTHFKVYWHDILSGPNPTSIMI 159
>gb|BT015679.1| Arabidopsis thaliana At1g55210 gene, complete cds
Length = 564
Score = 115 bits (246), Expect(2) = 9e-029
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 232 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 411
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 412 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 552
Score = 33.6 bits (67), Expect(2) = 9e-029
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT +VY+HD+++G NPT++ I
Sbjct: 130 LTHFKVYWHDILSGPNPTSIMI 195
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17
Length = 80733
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 10033 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 10212
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 10213 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 10353
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 8125 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 8304
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 8305 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 8457
Score = 113 bits (241), Expect(2) = 9e-027
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -2 / +3
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q G LMVMNF FT G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 12216 TVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSG 12395
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 12396 IFRFARGYVEART 12434
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 8035 LTHFRVYWHDILSGSNPSSVVI 8100
Score = 29.0 bits (57), Expect(2) = 9e-027
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+H+ V G NP++V I Q
Sbjct: 12066 LTHLRVYWHNSVNGRNPSSVMIQQ 12137
Score = 28.1 bits (55), Expect(2) = 5e-027
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPT 650
LT VY+HD+++G NP+
Sbjct: 9924 LTHLRVYWHDILSGQNPS 9977
>ref|NM_112211.2| Arabidopsis thaliana unknown protein AT3G13650 mRNA, complete cds
Length = 981
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 381 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 560
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 561 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 713
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 291 LTHFRVYWHDILSGSNPSSVVI 356
>dbj|AK118030.1| Arabidopsis thaliana At3g13650 mRNA for putative dirigent protein,
complete cds, clone: RAFL19-24-O19
Length = 773
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 381 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 560
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 561 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 713
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 291 LTHFRVYWHDILSGSNPSSVVI 356
>emb|BX821492.1|CNS0A97B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL45ZC05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 637
Score = 90.9 bits (192), Expect(2) = 1e-027
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y + ++ GL+M M+F F G + ST+S++G+N ++ +REM IVGG+G F
Sbjct: 301 VGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGIF 480
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
RMARGY + T +G +V Y V +
Sbjct: 481 RMARGYSISRTNWFDPKTGYAIVGYYVTI 567
Score = 54.7 bits (113), Expect(2) = 1e-027
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLT 566
+T + YFHD ++G NPTAV++AQ FGAV +DD LT
Sbjct: 136 VTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALT 273
>gb|AU238879.1|AU238879 AU238879 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-24-O19 5',
mRNA sequence
Length = 610
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / -2
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 393 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 214
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 213 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 61
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 483 LTHFRVYWHDILSGSNPSSVVI 418
>gb|AV552494.1|AV552494 AV552494 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ31b10R 5', mRNA sequence
Length = 573
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 217 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 396
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 397 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 549
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 127 LTHFRVYWHDILSGSNPSSVVI 192
>gb|BT010587.1| Arabidopsis thaliana At3g13650 gene, complete cds
Length = 561
Score = 113 bits (242), Expect(2) = 1e-027
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 217 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 396
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 397 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 549
Score = 31.8 bits (63), Expect(2) = 1e-027
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 127 LTHFRVYWHDILSGSNPSSVVI 192
>gb|AV560017.1|AV560017 AV560017 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ127f04F 3', mRNA sequence
Length = 606
Score = 115 bits (246), Expect(2) = 2e-027
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 521 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 342
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 341 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 201
Score = 29.0 bits (57), Expect(2) = 2e-027
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 685 YFHDVVAGTNPTAVRI 638
Y+HD+++G NPT++ I
Sbjct: 605 YWHDILSGPNPTSIMI 558
>emb|BX825189.1|CNS0A52C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL19ZF05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 679
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 273 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 452
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 453 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 593
Score = 28.1 bits (55), Expect(2) = 5e-027
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPT 650
LT VY+HD+++G NP+
Sbjct: 164 LTHLRVYWHDILSGQNPS 217
>ref|NM_112212.2| Arabidopsis thaliana unknown protein AT3G13660 mRNA, complete cds
Length = 677
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 273 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 452
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 453 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 593
Score = 28.1 bits (55), Expect(2) = 5e-027
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPT 650
LT VY+HD+++G NP+
Sbjct: 164 LTHLRVYWHDILSGQNPS 217
>gb|BT015420.1| Arabidopsis thaliana At3g13660 gene, complete cds
Length = 660
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 272 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 451
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 452 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 592
Score = 28.1 bits (55), Expect(2) = 5e-027
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPT 650
LT VY+HD+++G NP+
Sbjct: 163 LTHLRVYWHDILSGQNPS 216
>ref|NM_112213.1| Arabidopsis thaliana unknown protein AT3G13662 mRNA, complete cds
Length = 561
Score = 113 bits (241), Expect(2) = 1e-026
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -2 / +1
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T VG+AQG Y A Q G LMVMNF FT G++NGST++ILGRN V+S VREM +VGGSG
Sbjct: 274 TVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSG 453
Query: 361 KFRMARGYVQAHT 323
FR ARGYV+A T
Sbjct: 454 IFRFARGYVEART 492
Score = 29.0 bits (57), Expect(2) = 1e-026
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+H+ V G NP++V I Q
Sbjct: 124 LTHLRVYWHNSVNGRNPSSVMIQQ 195
>emb|BX824617.1|CNS0A65M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH60ZA01 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 588
Score = 113 bits (242), Expect(2) = 3e-026
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 233 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 412
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LGRN VL+ VREM ++GGSG FR ARGYV+A T+ SG V+Y+ V
Sbjct: 413 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 565
Score = 26.7 bits (52), Expect(2) = 3e-026
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT V +HD+++G+NP++V I
Sbjct: 143 LTHFRV*WHDILSGSNPSSVVI 208
>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1,
complete sequence
Length = 81490
Score = 119 bits (254), Expect = 1e-025
Identities = 54/108 (50%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D T EVGRAQG Y ADQ GLLM N VFT G+ + ST+++ GR
Sbjct: 9222 LVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGR 9401
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VLS VREM I+GG+G FR RGY A T+ TSG VV+Y V +
Sbjct: 9402 NPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYI 9545
>ref|NM_105259.1| Arabidopsis thaliana unknown protein AT1G65870 mRNA, complete cds
Length = 570
Score = 119 bits (254), Expect = 1e-025
Identities = 54/108 (50%), Positives = 66/108 (61%)
Frame = -2 / +1
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D T EVGRAQG Y ADQ GLLM N VFT G+ + ST+++ GR
Sbjct: 238 LVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGR 417
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VLS VREM I+GG+G FR RGY A T+ TSG VV+Y V +
Sbjct: 418 NPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYI 561
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 119 bits (254), Expect = 1e-025
Identities = 54/108 (50%), Positives = 66/108 (61%)
Frame = -2 / +2
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D T EVGRAQG Y ADQ GLLM N VFT G+ + ST+++ GR
Sbjct: 24507524 LVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGR 24507703
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VLS VREM I+GG+G FR RGY A T+ TSG VV+Y V +
Sbjct: 24507704 NPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYI 24507847
Score = 115 bits (246), Expect = 1e-024
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 20602056 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 20601877
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 20601876 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 20601736
Score = 112 bits (239), Expect = 1e-023
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y ++ GLLM MNF G++NGST+++LGRN V VREM ++GGSG F
Sbjct: 21540132 VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLF 21540311
Query: 355 RMARGYVQAHTIDSGATSGTTVVQY 281
R ARGYVQA T + +G +V+Y
Sbjct: 21540312 RFARGYVQASTHEFNLKTGNAIVEY 21540386
Score = 105 bits (225), Expect = 1e-021
Identities = 46/89 (51%), Positives = 55/89 (61%)
Frame = -2 / -2
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
V I D T + EVGRAQG Y D +TFG MV NFVFT GE NGST ++ GRN
Sbjct: 8104222 VLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRN 8104043
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHT 323
+L + RE+ I+GG+G FR ARGY T
Sbjct: 8104042 PILLEERELPIIGGTGDFRFARGYALPKT 8103956
>gb|AI995152.1|AI995152 701502370 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701502370, mRNA sequence
Length = 504
Score = 106 bits (227), Expect(2) = 1e-025
Identities = 47/94 (50%), Positives = 60/94 (63%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 208 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 387
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTI 320
LGRN VL+ VREM ++GGSG FR ARGYV+A T+
Sbjct: 388 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTM 489
Score = 31.8 bits (63), Expect(2) = 1e-025
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 118 LTHFRVYWHDILSGSNPSSVVI 183
>gb|AV554605.1|AV554605 AV554605 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ96c03R 5', mRNA sequence
Length = 494
Score = 106 bits (227), Expect(2) = 1e-025
Identities = 47/94 (50%), Positives = 60/94 (63%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSI 422
F V + D T T VG+AQG Y Q+ LMVMNF F G++NGS+++I
Sbjct: 210 FFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAI 389
Query: 421 LGRNEVLSDVREMSIVGGSGKFRMARGYVQAHTI 320
LGRN VL+ VREM ++GGSG FR ARGYV+A T+
Sbjct: 390 LGRNAVLTKVREMPVIGGSGLFRFARGYVEARTM 491
Score = 31.8 bits (63), Expect(2) = 1e-025
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+++G+NP++V I
Sbjct: 120 LTHFRVYWHDILSGSNPSSVVI 185
>gb|AY201177.1|AY201177 AY201177 Arabidopsis thaliana Landsberg DNA Arabidopsis thaliana
genomic clone GT1661.Ds3.04.23.99.b.487, DNA sequence
Length = 487
Score = 117 bits (251), Expect = 3e-025
Identities = 53/108 (49%), Positives = 66/108 (61%)
Frame = -2 / +3
Query: 592 VVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGR 413
+VA+ D T EVG+AQG Y ADQ GLLM N VFT G+ + ST+++ GR
Sbjct: 93 LVAVVDDKLTVRPEITSEEVGKAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGR 272
Query: 412 NEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
N VLS VREM I+GG+G FR RGY A T+ TSG VV+Y V +
Sbjct: 273 NPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYI 416
>gb|AV782353.1|AV782353 AV782353 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-16-K16 3',
mRNA sequence
Length = 423
Score = 115 bits (246), Expect = 1e-024
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 408 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 229
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 228 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 88
>gb|AV542161.1|AV542161 AV542161 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ18b07F 3', mRNA sequence
Length = 500
Score = 115 bits (246), Expect = 1e-024
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -3
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 453 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRN 274
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 273 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 133
>gb|AV556495.1|AV556495 AV556495 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ044g06F 3', mRNA sequence
Length = 569
Score = 115 bits (246), Expect = 1e-024
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -2 / -1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 521 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTIAILGRN 342
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 341 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 201
>gb|BT015654.1| Arabidopsis thaliana At3g13660 gene, complete cds
Length = 378
Score = 115 bits (245), Expect = 2e-024
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -2 / +1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+ + D T T VG++QG Y A Q+ G LM MNF F G++NGST++ILGRN
Sbjct: 46 ITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRN 225
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
V S VREM++VGGSG FR+ARGYV+A T +G V+Y V
Sbjct: 226 TVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 366
>gb|AV531068.1|AV531068 AV531068 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB014e10F 3', mRNA sequence
Length = 404
Score = 112 bits (239), Expect = 1e-023
Identities = 51/107 (47%), Positives = 65/107 (60%)
Frame = -2 / -1
Query: 589 VAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRN 410
+++ D T T +G+AQG Y A Q+ G LM MNF F G++NGS + ILGRN
Sbjct: 401 ISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSAIPILGRN 222
Query: 409 EVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
LS+VREM IVGGSG FR ARGYV+A T +G V+Y+ V
Sbjct: 221 TALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 81
>gb|AV544434.1|AV544434 AV544434 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ43d10F 3', mRNA sequence
Length = 461
Score = 112 bits (239), Expect = 1e-023
Identities = 49/91 (53%), Positives = 61/91 (67%)
Frame = -2 / -2
Query: 541 TEVGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSG 362
T +G+AQG Y Q+ G LM MNF F G++NGST++ILGRN LS+VREM IVGGSG
Sbjct: 430 TVLGQAQGFYAGTAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSG 251
Query: 361 KFRMARGYVQAHTIDSGATSGTTVVQYTVNV 269
FR ARGYV+A T +G V+Y+ V
Sbjct: 250 LFRFARGYVEARTKWINLKNGDATVEYSCYV 158
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 960,846,339
Number of Sequences: 1013581
Number of extensions: 11234378
Number of successful extensions: 127256
Number of sequences better than 1.0e-020: 79
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44073335966
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)