TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3438088.2.1
(615 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosom... 172 7e-044
dbj|E64635.1| Method for modifying plant cell wall component 172 7e-044
gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC)... 172 7e-044
gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D... 172 7e-044
ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydr... 172 7e-044
gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, ... 172 7e-044
gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, compl... 172 7e-044
gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pe... 172 7e-044
emb|A83259.1| Sequence 1 from Patent WO9850568 172 7e-044
dbj|E64634.1| Method for modifying plant cell wall component 172 7e-044
gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC)... 172 7e-044
gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, ... 172 7e-044
dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase hom... 172 7e-044
gb|CK119494.1|CK119494 212c03.p1 AtM1 Arabidopsis thaliana ... 172 7e-042
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 172 7e-042
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 172 7e-042
gb|AV782845.1|AV782845 AV782845 RAFL5 Arabidopsis thaliana ... 163 5e-041
gb|CW800642.1|CW800642 WiscDsLox329F10 Arabidopsis thaliana... 122 1e-037
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 90 1e-033
emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosom... 90 1e-033
gb|AC005861.4|AC005861 Arabidopsis thaliana clone F23B24, *... 90 1e-033
emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome ... 90 1e-033
ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzin... 90 2e-033
gb|CW801060.1|CW801060 WiscDsLox293-296invH12 Arabidopsis t... 90 2e-033
gb|BH254251.1|BH254251 SALK_016250 Arabidopsis thaliana TDN... 90 2e-033
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 126 1e-028
ref|NM_105234.2| Arabidopsis thaliana hydrolase, hydrolyzin... 126 1e-028
emb|AX651256.1| Sequence 40 from Patent WO03000898 126 1e-028
gb|CK120241.1|CK120241 208b21.p1 AtM1 Arabidopsis thaliana ... 128 2e-028
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 126 6e-028
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 126 6e-028
gb|BP617067.1|BP617067 BP617067 RAFL16 Arabidopsis thaliana... 102 8e-021
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5
Length = 71807
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / -1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 35156 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 34977
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 34976 DKRDGYRDVRMNYNYTE 34926
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / +1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 34870 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 35049
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 35050 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 35157
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 34845 QKHYFLSCSSFVPYSTTSTSTMETL 34771
>dbj|E64635.1| Method for modifying plant cell wall component
Length = 12319
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 5464 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 5643
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 5644 DKRDGYRDVRMNYNYTE 5694
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -3
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 5750 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 5571
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 5570 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 5463
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 5775 QKHYFLSCSSFVPYSTTSTSTMETL 5849
>gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC) gene, complete cds
Length = 4033
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 3005 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 3184
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 3185 DKRDGYRDVRMNYNYTE 3235
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 3291 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 3112
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 3111 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 3004
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 3316 QKHYFLSCSSFVPYSTTSTSTMETL 3390
>gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D-glucanase KORRIGAN (KOR) gene,
KOR-1 allele, complete cds
Length = 2873
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 2166 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 2345
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 2346 DKRDGYRDVRMNYNYTE 2396
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 2452 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 2273
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 2272 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 2165
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 2477 QKHYFLSCSSFVPYSTTSTSTMETL 2551
>ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydrolase, hydrolyzing
O-glycosyl compounds AT5G49720 (KOR1) mRNA, complete cds
Length = 2360
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1600 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1779
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1780 DKRDGYRDVRMNYNYTE 1830
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1886 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1707
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1706 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1599
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1911 QKHYFLSCSSFVPYSTTSTSTMETL 1985
>gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, complete cds
Length = 2307
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1600 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1779
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1780 DKRDGYRDVRMNYNYTE 1830
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1886 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1707
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1706 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1599
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1911 QKHYFLSCSSFVPYSTTSTSTMETL 1985
>gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, complete sequence
Length = 2303
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1600 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1779
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1780 DKRDGYRDVRMNYNYTE 1830
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1886 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1707
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1706 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1599
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1911 QKHYFLSCSSFVPYSTTSTSTMETL 1985
>gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pep) mRNA, complete cds
Length = 2257
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1550 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1729
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1730 DKRDGYRDVRMNYNYTE 1780
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1836 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1657
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1656 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1549
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1861 QKHYFLSCSSFVPYSTTSTSTMETL 1935
>emb|A83259.1| Sequence 1 from Patent WO9850568
Length = 2257
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1550 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1729
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1730 DKRDGYRDVRMNYNYTE 1780
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1836 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1657
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1656 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1549
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1861 QKHYFLSCSSFVPYSTTSTSTMETL 1935
>dbj|E64634.1| Method for modifying plant cell wall component
Length = 2257
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1550 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1729
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1730 DKRDGYRDVRMNYNYTE 1780
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1836 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1657
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1656 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1549
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1861 QKHYFLSCSSFVPYSTTSTSTMETL 1935
>gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC) mRNA, complete cds
Length = 2179
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1543 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1722
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1723 DKRDGYRDVRMNYNYTE 1773
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -3
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1829 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1650
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1649 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1542
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1854 QKHYFLSCSSFVPYSTTSTSTMETL 1928
>gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, complete cds
Length = 1866
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 1480 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 1659
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 1660 DKRDGYRDVRMNYNYTE 1710
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 1766 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 1587
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 1586 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 1479
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 1791 QKHYFLSCSSFVPYSTTSTSTMETL 1865
>dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase homolog OR16pep precursor,
partial cds, clone: RAFL24-21-F09
Length = 1102
Score = 172 bits (371), Expect(2) = 7e-044
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 386 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 565
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 566 DKRDGYRDVRMNYNYTE 616
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 672 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 493
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 492 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 385
Score = 26.7 bits (52), Expect(2) = 7e-044
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 697 QKHYFLSCSSFVPYSTTSTSTMETL 771
>gb|CK119494.1|CK119494 212c03.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C03212
5-PRIME, mRNA sequence
Length = 772
Score = 172 bits (371), Expect = 7e-042
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 522 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 701
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 702 DKRDGYRDVRMNYNYTE 752
Score = 126 bits (269), Expect = 8e-028
Identities = 60/84 (71%), Positives = 64/84 (76%)
Frame = +3 / -1
Query: 363 ALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPPLQP**TPFLGIE 542
ALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPPLQ T FLGIE
Sbjct: 772 ALPARVVSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPPLQLYLTLFLGIE 593
Query: 543 APRW*TCLG*RFPNPTT*LIFKGF 614
AP TCLG P PTT*LIF+GF
Sbjct: 592 APL*CTCLGYFVPKPTT*LIFRGF 521
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 172 bits (371), Expect = 7e-042
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / -3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 18198278 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 18198099
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 18198098 DKRDGYRDVRMNYNYTE 18198048
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / +1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 18197992 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 18198171
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 18198172 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 18198279
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 172 bits (371), Expect = 7e-042
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -3 / -1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGP
Sbjct: 20215377 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGP 20215198
Query: 433 DRHDGFKDARRNYNYTE 383
D+ DG++D R NYNYTE
Sbjct: 20215197 DKRDGYRDVRMNYNYTE 20215147
Score = 149 bits (320), Expect = 7e-035
Identities = 70/96 (72%), Positives = 74/96 (77%)
Frame = +3 / +2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 20215091 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 20215270
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
LQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 20215271 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 20215378
>gb|AV782845.1|AV782845 AV782845 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-G06 3',
mRNA sequence
Length = 693
Score = 163 bits (350), Expect(2) = 5e-041
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -3 / -1
Query: 598 SYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDG 419
SYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GAMVAGPD+ DG
Sbjct: 693 SYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDG 514
Query: 418 FKDARRNYNYTE 383
++D R NYNYTE
Sbjct: 513 YRDVRMNYNYTE 478
Score = 136 bits (292), Expect = 5e-031
Identities = 65/90 (72%), Positives = 68/90 (75%)
Frame = +3 / +2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPD AT AATRPALPA V SV*L*F+R S PS SGPATMAP++V GFGFL SLHFHPP
Sbjct: 422 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMAPSIVFGFGFLLSLHFHPP 601
Query: 507 LQP**TPFLGIEAPRW*TCLG*RFPNPTT* 596
LQ T FLGIEAP TCLG P PTT*
Sbjct: 602 LQLYLTLFLGIEAPL*CTCLGYFVPKPTT* 691
Score = 26.7 bits (52), Expect(2) = 5e-041
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 397 QKHYFLSCSSFVPYSTTSTSTMETL 323
>gb|CW800642.1|CW800642 WiscDsLox329F10 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 817
Score = 122 bits (261), Expect(3) = 1e-037
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -3 / +2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNT 461
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNT
Sbjct: 212 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNT 364
Score = 80.8 bits (170), Expect(2) = 1e-028
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 462 VLGFGFLASLHFHPPLQP**TPFLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
V GFGFL SLHFHPPLQ T FLGIEAP TCLG P PTT*LIF+GF
Sbjct: 363 VFGFGFLLSLHFHPPLQLYLTLFLGIEAPL*CTCLGYFVPKPTT*LIFRGF 211
Score = 67.5 bits (141), Expect(2) = 1e-028
Identities = 34/53 (64%), Positives = 36/53 (67%)
Frame = +3 / -1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLA 485
SPD AT AATRPALPA V SV*L*F+R S PS SGPATM + FLA
Sbjct: 499 SPDNATRAATRPALPARVGSV*L*FIRTSRYPSRLSGPATMVXTXRVWVWFLA 341
Score = 47.8 bits (98), Expect(3) = 1e-037
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3 / +3
Query: 484 AKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
A+ MVAGPD+ DG++D R NYNYTE
Sbjct: 342 ARNQTQTRXVXTMVAGPDKRDGYRDVRMNYNYTE 443
Score = 26.7 bits (52), Expect(3) = 1e-037
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 308 QEHHVLCSTAHVPFASAAAGSMETV 234
Q+H+ L ++ VP+++ + +MET+
Sbjct: 524 QKHYFLSCSSFVPYSTTSTSTMETL 598
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 90.4 bits (191), Expect(2) = 1e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 8490740 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 8490919
Query: 507 LQ 512
+Q
Sbjct: 8490920 VQ 8490925
Score = 86.3 bits (182), Expect(3) = 1e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -2
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 8490924 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 8490796
Score = 66.1 bits (138), Expect(3) = 1e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 8491023 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 8490937
Score = 44.1 bits (90), Expect(2) = 1e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +2
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 8490938 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 8491024
Score = 30.4 bits (60), Expect(3) = 1e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 8490729 GGIDKNTMFSAV 8490694
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
Length = 198402
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +1
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 45676 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 45855
Query: 507 LQ 512
+Q
Sbjct: 45856 VQ 45861
Score = 86.3 bits (182), Expect(3) = 1e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -2
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 45860 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 45732
Score = 66.1 bits (138), Expect(3) = 1e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 45959 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 45873
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 45874 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 45960
Score = 30.4 bits (60), Expect(3) = 1e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 45665 GGIDKNTMFSAV 45630
>gb|AC005861.4|AC005861 Arabidopsis thaliana clone F23B24, *** SEQUENCING IN PROGRESS ***, 6
unordered pieces
Length = 112369
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 35133 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 35312
Query: 507 LQ 512
+Q
Sbjct: 35313 VQ 35318
Score = 86.3 bits (182), Expect(3) = 1e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -1
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 35317 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 35189
Score = 66.1 bits (138), Expect(3) = 1e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 35416 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 35330
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 35331 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 35417
Score = 30.4 bits (60), Expect(3) = 1e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 35122 GGIDKNTMFSAV 35087
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project)
Length = 108459
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 29019 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 29198
Query: 507 LQ 512
+Q
Sbjct: 29199 VQ 29204
Score = 86.3 bits (182), Expect(3) = 1e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -3
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 29203 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 29075
Score = 66.1 bits (138), Expect(3) = 1e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 29302 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 29216
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 29217 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 29303
Score = 30.4 bits (60), Expect(3) = 1e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 29008 GGIDKNTMFSAV 28973
>ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G24260 mRNA, complete cds
Length = 1863
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / -2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 1766 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 1587
Query: 507 LQ 512
+Q
Sbjct: 1586 VQ 1581
Score = 86.3 bits (182), Expect(3) = 2e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / +1
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 1582 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 1710
Score = 66.1 bits (138), Expect(3) = 2e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 1483 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 1569
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / -2
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 1568 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 1482
Score = 30.4 bits (60), Expect(3) = 2e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 1777 GGIDKNTMFSAV 1812
>gb|CW801060.1|CW801060 WiscDsLox293-296invH12 Arabidopsis thaliana T-DNA insertion
flanking sequences Arabidopsis thaliana genomic, DNA
sequence
Length = 761
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +2
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 275 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 454
Query: 507 LQ 512
+Q
Sbjct: 455 VQ 460
Score = 86.3 bits (182), Expect(3) = 2e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -3
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 459 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 331
Score = 66.1 bits (138), Expect(3) = 2e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 558 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 472
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +2
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 473 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 559
Score = 30.4 bits (60), Expect(3) = 2e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 264 GGIDKNTMFSAV 229
>gb|BH254251.1|BH254251 SALK_016250 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_016250, DNA sequence
Length = 477
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 327 SPDKATNAATRPALPASVASV*L*FLRASLNPSWRSGPATMAPAMVLGFGFLASLHFHPP 506
SPDKAT AATRPA PA V SV*L*F+R S NPS SGPAT+AP + G FL H +PP
Sbjct: 84 SPDKATRAATRPAFPARVGSV*L*FVRMSWNPSCLSGPATIAPLIAFGLFFLLFFHLNPP 263
Query: 507 LQ 512
+Q
Sbjct: 264 VQ 269
Score = 86.3 bits (182), Expect(3) = 2e-033
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -3 / -3
Query: 511 CKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFKDARRNYNYTE 383
C GG+KW+ +KK NPN I GAMVAGPD+HDGF D R NYNYTE
Sbjct: 268 CTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE 140
Score = 66.1 bits (138), Expect(3) = 2e-033
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKN 527
NP KMSYVVG+G+RYP+ VHHRGASIPKN
Sbjct: 367 NPRKMSYVVGYGQRYPKQVHHRGASIPKN 281
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 528 FLGIEAPRW*TCLG*RFPNPTT*LIFKGF 614
F GIEAP TC G R P PTT*LIF+GF
Sbjct: 282 FFGIEAPL*CTCFGYRCP*PTT*LIFRGF 368
Score = 30.4 bits (60), Expect(3) = 2e-033
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 319 GGVDKNTMFSAV 284
GG+DKNTMFSAV
Sbjct: 73 GGIDKNTMFSAV 38
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 126 bits (270), Expect(2) = 1e-028
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFGK++PR VHHRGA+IP + C+ G K+RD K PNPN I GAMV GP
Sbjct: 71273 NPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGP 71094
Query: 433 DRHDGFKDARRNYNYTE 383
++ D F D R NYN +E
Sbjct: 71093 NKFDEFHDLRNNYNASE 71043
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 313 VDKNTMFSAV 284
+DKNTMF++V
Sbjct: 70973 IDKNTMFNSV 70944
>ref|NM_105234.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G65610 mRNA, complete cds
Length = 2115
Score = 126 bits (270), Expect(2) = 1e-028
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFGK++PR VHHRGA+IP + C+ G K+RD K PNPN I GAMV GP
Sbjct: 1591 NPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGP 1770
Query: 433 DRHDGFKDARRNYNYTE 383
++ D F D R NYN +E
Sbjct: 1771 NKFDEFHDLRNNYNASE 1821
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 313 VDKNTMFSAV 284
+DKNTMF++V
Sbjct: 1891 IDKNTMFNSV 1920
>emb|AX651256.1| Sequence 40 from Patent WO03000898
Length = 1872
Score = 126 bits (270), Expect(2) = 1e-028
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -3 / +1
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFGK++PR VHHRGA+IP + C+ G K+RD K PNPN I GAMV GP
Sbjct: 1492 NPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGP 1671
Query: 433 DRHDGFKDARRNYNYTE 383
++ D F D R NYN +E
Sbjct: 1672 NKFDEFHDLRNNYNASE 1722
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 313 VDKNTMFSAV 284
+DKNTMF++V
Sbjct: 1792 IDKNTMFNSV 1821
>gb|CK120241.1|CK120241 208b21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B21208
5-PRIME, mRNA sequence
Length = 758
Score = 128 bits (274), Expect = 2e-028
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = -3 / +3
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGA 449
NP KMSYVVGFG +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI GA
Sbjct: 594 NPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGA 758
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 126 bits (270), Expect = 6e-028
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFGK++PR VHHRGA+IP + C+ G K+RD K PNPN I GAMV GP
Sbjct: 8633518 NPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGP 8633339
Query: 433 DRHDGFKDARRNYNYTE 383
++ D F D R NYN +E
Sbjct: 8633338 NKFDEFHDLRNNYNASE 8633288
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 126 bits (270), Expect = 6e-028
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = -3 / -2
Query: 613 NPLKMSYVVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGP 434
NPLKMSYVVGFGK++PR VHHRGA+IP + C+ G K+RD K PNPN I GAMV GP
Sbjct: 24395866 NPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGP 24395687
Query: 433 DRHDGFKDARRNYNYTE 383
++ D F D R NYN +E
Sbjct: 24395686 NKFDEFHDLRNNYNASE 24395636
>gb|BP617067.1|BP617067 BP617067 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-22-H08 3',
mRNA sequence
Length = 451
Score = 102 bits (218), Expect = 8e-021
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -3 / -2
Query: 580 GKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAG 452
G +YPRHVHHRGASIPKN V Y CKGGWKWRD+KKPNPNTI G
Sbjct: 450 GTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEG 322
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,312,974,354
Number of Sequences: 1013581
Number of extensions: 19808551
Number of successful extensions: 211539
Number of sequences better than 1.0e-020: 41
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 36837766915
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)