TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336950.2.1
(645 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_111911.3| Arabidopsis thaliana ASD1; hydrolase, acti... 173 7e-063
emb|BX824011.1|CNS0A4VB Arabidopsis thaliana Full-length cD... 173 7e-063
gb|AY243509.1| Arabidopsis thaliana alpha-L-arabinofuranosi... 173 7e-063
gb|AF372949.1|AF372949 Arabidopsis thaliana AT3g10740/T7M13... 173 7e-063
gb|AY143944.1| Arabidopsis thaliana At3g10740/T7M13_18 mRNA... 173 7e-063
gb|BX841311.1|BX841311 BX841311 Arabidopsis thaliana Flower... 173 7e-063
gb|AY063925.1| Arabidopsis thaliana putative arabinosidase ... 172 3e-062
ref|NM_122513.3| Arabidopsis thaliana hydrolase, acting on ... 172 3e-062
gb|BT006062.1| Arabidopsis thaliana clone U18147 unknown pr... 172 3e-062
gb|AY243510.1| Arabidopsis thaliana alpha-L-arabinofuranosi... 172 3e-062
gb|AV825043.1|AV825043 AV825043 RAFL6 Arabidopsis thaliana ... 172 3e-062
gb|AV827337.1|AV827337 AV827337 RAFL9 Arabidopsis thaliana ... 173 7e-059
gb|BE522243.1|BE522243 M24F11STM Arabidopsis developing see... 172 3e-055
emb|BX833642.1|CNS0A0L4 Arabidopsis thaliana Full-length cD... 172 1e-049
gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 94 3e-044
gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome II... 95 4e-043
gb|BP812382.1|BP812382 BP812382 RAFL19 Arabidopsis thaliana... 130 3e-029
gb|BP853835.1|BP853835 BP853835 RAFL21 Arabidopsis thaliana... 126 6e-028
gb|BE521313.1|BE521313 M18H6STM Arabidopsis developing seed... 90 6e-023
>ref|NM_111911.3| Arabidopsis thaliana ASD1; hydrolase, acting on glycosyl bonds
AT3G10740 (ASD1) mRNA, complete cds
Length = 2427
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +2
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 371 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 550
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 551 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 646
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -1
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 669 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 490
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 489 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 349
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 653 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 793
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 792 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 652
>emb|BX824011.1|CNS0A4VB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH14ZD10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2351
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 375 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 554
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 555 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 650
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 673 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 494
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 493 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 353
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 657 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 797
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 796 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 656
>gb|AY243509.1| Arabidopsis thaliana alpha-L-arabinofuranosidase (ASD1) mRNA,
complete cds
Length = 2312
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +2
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 332 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 511
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 512 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 607
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -3
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 630 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 451
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 450 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 310
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 614 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 754
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 753 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 613
>gb|AF372949.1|AF372949 Arabidopsis thaliana AT3g10740/T7M13_18 mRNA, complete cds
Length = 2254
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 198 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 377
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 378 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 473
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -1
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 496 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 317
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 316 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 176
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 480 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 620
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 619 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 479
>gb|AY143944.1| Arabidopsis thaliana At3g10740/T7M13_18 mRNA, complete cds
Length = 2037
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 124 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 303
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 304 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 399
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 422 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 243
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 242 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 102
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +1
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 406 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 546
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 545 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 405
>gb|BX841311.1|BX841311 BX841311 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB91ZE06 5PRIM, mRNA sequence
Length = 1098
Score = 173 bits (373), Expect(2) = 7e-063
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 183 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 362
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 363 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 458
Score = 148 bits (317), Expect(2) = 3e-046
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -3
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 481 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 302
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 301 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 161
Score = 89.5 bits (189), Expect(2) = 7e-063
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 465 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 605
Score = 59.7 bits (124), Expect(2) = 3e-046
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
P ELV++T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 604 PFELVNDTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 464
>gb|AY063925.1| Arabidopsis thaliana putative arabinosidase (At5g26120) mRNA,
complete cds
Length = 2219
Score = 172 bits (371), Expect(2) = 3e-062
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 196 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 375
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 376 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 471
Score = 133 bits (285), Expect(2) = 7e-043
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -1
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 494 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 315
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 314 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 189
Score = 88.1 bits (186), Expect(2) = 3e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1 / +1
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
++CP GGVGVYNPG+WGMNIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 472 NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 618
Score = 62.9 bits (131), Expect(2) = 7e-043
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
PLELV++T S+ + T T L FPSSMFMPQ PGL*TPTPP GQ
Sbjct: 617 PLELVNDTDTSMSPVERTYNTTLYFFPSSMFMPQ*PGL*TPTPPNGQ 477
>ref|NM_122513.3| Arabidopsis thaliana hydrolase, acting on glycosyl bonds AT5G26120
mRNA, complete cds
Length = 2208
Score = 172 bits (371), Expect(2) = 3e-062
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 196 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 375
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 376 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 471
Score = 133 bits (285), Expect(2) = 7e-043
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 494 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 315
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 314 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 189
Score = 88.1 bits (186), Expect(2) = 3e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1 / +1
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
++CP GGVGVYNPG+WGMNIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 472 NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 618
Score = 62.9 bits (131), Expect(2) = 7e-043
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
PLELV++T S+ + T T L FPSSMFMPQ PGL*TPTPP GQ
Sbjct: 617 PLELVNDTDTSMSPVERTYNTTLYFFPSSMFMPQ*PGL*TPTPPNGQ 477
>gb|BT006062.1| Arabidopsis thaliana clone U18147 unknown protein (At5g26120) mRNA,
complete cds
Length = 2055
Score = 172 bits (371), Expect(2) = 3e-062
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 121 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 300
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 301 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 396
Score = 133 bits (285), Expect(2) = 7e-043
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 419 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 240
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 239 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 114
Score = 88.1 bits (186), Expect(2) = 3e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1 / +1
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
++CP GGVGVYNPG+WGMNIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 397 NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 543
Score = 62.9 bits (131), Expect(2) = 7e-043
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
PLELV++T S+ + T T L FPSSMFMPQ PGL*TPTPP GQ
Sbjct: 542 PLELVNDTDTSMSPVERTYNTTLYFFPSSMFMPQ*PGL*TPTPPNGQ 402
>gb|AY243510.1| Arabidopsis thaliana alpha-L-arabinofuranosidase (ASD2) mRNA,
complete cds
Length = 2043
Score = 172 bits (371), Expect(2) = 3e-062
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 126 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 305
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 306 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 401
Score = 133 bits (285), Expect(2) = 7e-043
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -3
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 424 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 245
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 244 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 119
Score = 88.1 bits (186), Expect(2) = 3e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1 / +3
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
++CP GGVGVYNPG+WGMNIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 402 NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 548
Score = 62.9 bits (131), Expect(2) = 7e-043
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
PLELV++T S+ + T T L FPSSMFMPQ PGL*TPTPP GQ
Sbjct: 547 PLELVNDTDTSMSPVERTYNTTLYFFPSSMFMPQ*PGL*TPTPPNGQ 407
>gb|AV825043.1|AV825043 AV825043 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-O18 5',
mRNA sequence
Length = 655
Score = 172 bits (371), Expect(2) = 3e-062
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +2
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 197 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 376
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 377 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 472
Score = 133 bits (285), Expect(2) = 7e-043
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 495 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 316
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 315 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 190
Score = 88.1 bits (186), Expect(2) = 3e-062
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1 / +2
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
++CP GGVGVYNPG+WGMNIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 473 NSCPLGGVGVYNPGYWGMNIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 619
Score = 62.9 bits (131), Expect(2) = 7e-043
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
PLELV++T S+ + T T L FPSSMFMPQ PGL*TPTPP GQ
Sbjct: 618 PLELVNDTDTSMSPVERTYNTTLYFFPSSMFMPQ*PGL*TPTPPNGQ 478
>gb|AV827337.1|AV827337 AV827337 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-14-D11 5',
mRNA sequence
Length = 602
Score = 173 bits (373), Expect(2) = 7e-059
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 198 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 377
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 378 VGDHSSIYVATDRSSCFERNKIALRMDVLCDS 473
Score = 148 bits (317), Expect(2) = 2e-043
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNPLL
Sbjct: 496 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNPLL 317
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
LTSSAH PPAPAWLISSKKIPNSVSG+ R EAST +V S+
Sbjct: 316 LTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 176
Score = 76.2 bits (160), Expect(2) = 7e-059
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVS 19
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VS
Sbjct: 480 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVS 602
Score = 50.1 bits (103), Expect(2) = 2e-043
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2 / -2
Query: 20 ETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQ 142
+T KS+ + T L FPSS+FMPQ PGL*TPTPP GQ
Sbjct: 601 DTDKSISPVERT*RATLYFFPSSIFMPQ*PGL*TPTPPDGQ 479
>gb|BE522243.1|BE522243 M24F11STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M24F11 5', mRNA sequence
Length = 390
Score = 172 bits (371), Expect(2) = 3e-055
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 22 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 201
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 202 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 297
Score = 133 bits (285), Expect(2) = 4e-038
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 320 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 141
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 140 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 15
Score = 64.8 bits (135), Expect(2) = 3e-055
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = -1 / +1
Query: 147 DNCPTGGVGVYNPGFWGMNIEEGKVYNLVMF 55
++CP GGVGVYNPG+WGMNIE+GK Y +V++
Sbjct: 298 NSCPLGGVGVYNPGYWGMNIEKGKKYXVVLY 390
Score = 46.9 bits (96), Expect(2) = 4e-038
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2 / -2
Query: 77 FPSSMFMPQNPGL*TPTPPVGQ 142
FP SMFMPQ PGL*TPTPP GQ
Sbjct: 368 FPFSMFMPQ*PGL*TPTPPNGQ 303
>emb|BX833642.1|CNS0A0L4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL67ZG12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 588
Score = 172 bits (371), Expect(2) = 1e-049
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = -1 / +3
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG PSNI PWSI
Sbjct: 183 TLQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSI 362
Query: 237 IGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
IGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 363 IGDESSIYVVTDRSSCFERNKIALRMEVLCDS 458
Score = 133 bits (285), Expect(2) = 1e-034
Identities = 63/102 (61%), Positives = 73/102 (71%)
Frame = +2 / -3
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLL 298
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNPLL
Sbjct: 481 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPLL 302
Query: 299 LTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAV 424
LTSSAH PPAPA ISSKKIPN VSGI R EAST V +
Sbjct: 301 LTSSAHSPPAPA*FISSKKIPNRVSGIGRRVTLEASTCSVTM 176
Score = 46.0 bits (94), Expect(2) = 1e-049
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1 / +3
Query: 147 DNCPTGGVGVYNPGFWGM 94
++CP GGVGVYNPG+WGM
Sbjct: 459 NSCPLGGVGVYNPGYWGM 512
Score = 35.0 bits (70), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 95 MPQNPGL*TPTPPVGQ 142
MPQ PGL*TPTPP GQ
Sbjct: 511 MPQ*PGL*TPTPPNGQ 464
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24
Length = 127053
Score = 93.6 bits (198), Expect(4) = 3e-044
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -1 / +1
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
GFEAGG PSNI PWSIIGD+SS++V TDR+SCF RN +ALRMEVLCD+
Sbjct: 21289 GFEAGGQIIPSNIWPWSIIGDESSIYVVTDRSSCFERNKIALRMEVLCDS 21438
Score = 73.5 bits (154), Expect(4) = 6e-027
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPL 295
TP LSQRTSILRA + R KH+ RSV+T ++SSP+MD G + +G+ PPASNP+
Sbjct: 21461 TPPNGQELLSQRTSILRAILLRSKHEERSVTT*MDDSSPIMDQGQILEGMICPPASNPI 21285
Score = 52.4 bits (108), Expect(4) = 3e-044
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 348 EEINHAGAGGIWAELVSNRGF 286
+EINHAGAGG+WAELVSNRGF
Sbjct: 21154 QEINHAGAGGLWAELVSNRGF 21216
Score = 46.0 bits (94), Expect(4) = 3e-044
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1 / +1
Query: 147 DNCPTGGVGVYNPGFWGM 94
++CP GGVGVYNPG+WGM
Sbjct: 21439 NSCPLGGVGVYNPGYWGM 21492
Score = 45.1 bits (92), Expect(4) = 3e-044
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -1 / +1
Query: 93 NIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
NIEEGK Y +V++V+S D++VS TSSNG
Sbjct: 21577 NIEEGKKYKVVLYVRSTGDIDVSVSFTSSNG 21669
Score = 38.2 bits (77), Expect(4) = 6e-027
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 281 ASNPLLLTSSAHMPPAPAWLIS 346
+ PLLLTSSAH PPAPA IS
Sbjct: 21221 SQKPLLLTSSAHSPPAPA*FIS 21156
Score = 35.0 bits (70), Expect(4) = 6e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 95 MPQNPGL*TPTPPVGQ 142
MPQ PGL*TPTPP GQ
Sbjct: 21491 MPQ*PGL*TPTPPNGQ 21444
Score = 30.9 bits (61), Expect(4) = 6e-027
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2 / -2
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMF 94
PLELV++T S+ + T T L FPSSMF
Sbjct: 21668 PLELVNDTDTSMSPVERTYNTTLYFFPSSMF 21576
>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
complete sequence
Length = 80379
Score = 95.5 bits (202), Expect(4) = 4e-043
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = -1 / +2
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDN 142
GFEAGG +TPSNI PWSI+GD SS++V TDR+SCF RN +ALRM+VLCD+
Sbjct: 52304 GFEAGGQNTPSNIWPWSIVGDHSSIYVATDRSSCFERNKIALRMDVLCDS 52453
Score = 76.7 bits (161), Expect(5) = 2e-034
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +2 / -1
Query: 119 TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNP 292
TP LSQ TSIL A +FR KHD RSV+T +E SP MDHG + +GV+ PPASNP
Sbjct: 52476 TPPDGQPLLSQSTSILSAILFRSKHDERSVATYMDE*SPTMDHGQILEGVFCPPASNP 52303
Score = 50.6 bits (104), Expect(4) = 4e-043
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = -1 / +3
Query: 129 GVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
G+ VY+ + NIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 52572 GLAVYSFSIFC*NIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 52700
Score = 48.7 bits (100), Expect(4) = 4e-043
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -1 / +1
Query: 345 EINHAGAGGIWAELVSNRG 289
EINHAGAGG+WAELVSNRG
Sbjct: 52123 EINHAGAGGLWAELVSNRG 52179
Score = 46.0 bits (94), Expect(5) = 2e-034
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -2
Query: 290 PLLLTSSAHMPPAPAWLIS 346
PLLLTSSAH PPAPAWLIS
Sbjct: 52178 PLLLTSSAHNPPAPAWLIS 52122
Score = 38.2 bits (77), Expect(4) = 4e-043
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFE 346
TL VDAS R IP+TLFGIFFE
Sbjct: 51958 TLQVDASNGGGRPIPETLFGIFFE 52029
Score = 35.4 bits (71), Expect(5) = 2e-034
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / -1
Query: 86 SMFMPQNPGL*TPTPPVGQ 142
++ MPQ PGL*TPTPP GQ
Sbjct: 52515 TLTMPQ*PGL*TPTPPDGQ 52459
Score = 35.0 bits (70), Expect(5) = 2e-034
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / -2
Query: 344 SSKKIPNSVSGIFRASCGEASTARVAVWVAST 439
+SKKIPNSVSG+ R EAST +V S+
Sbjct: 52031 TSKKIPNSVSGMGRPPPLEASTCKVTAGFGSS 51936
Score = 27.6 bits (54), Expect(5) = 2e-034
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMF 94
P ELV++T KS+ + T L FPSS+F
Sbjct: 52699 PFELVNDTDKSISPVERT*RATLYFFPSSIF 52607
>gb|BP812382.1|BP812382 BP812382 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-D18 5',
mRNA sequence
Length = 401
Score = 130 bits (279), Expect = 3e-029
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = -1 / +1
Query: 417 TLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSI 238
TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI
Sbjct: 196 TLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSI 375
Query: 237 IGDDSSVF 214
+GD SS++
Sbjct: 376 VGDHSSIY 399
Score = 113 bits (242), Expect = 4e-024
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +2 / -1
Query: 212 TNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRAS 391
T +E SP MDHG + +GV+ PPASNPLLLTSSAH PPAPAWLISSKKIPNSVSG+ R
Sbjct: 401 TYMDE*SPTMDHGQILEGVFCPPASNPLLLTSSAHNPPAPAWLISSKKIPNSVSGMGRPP 222
Query: 392 CGEASTARVAVWVAST 439
EAST +V S+
Sbjct: 221 PLEASTCKVTAGFGSS 174
>gb|BP853835.1|BP853835 BP853835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-J09 5',
mRNA sequence
Length = 393
Score = 126 bits (270), Expect = 6e-028
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L+ + + ++ + TL VDAS R IP+TLFGIFFEEINHAGAGG+WAELV
Sbjct: 134 LALVYQSLRVVDAQEDPKPAVTLQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELV 313
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDS 223
SNRGFEAGG +TPSNI PWSI+GD S
Sbjct: 314 SNRGFEAGGQNTPSNIWPWSIVGDHS 391
Score = 112 bits (240), Expect = 8e-024
Identities = 49/73 (67%), Positives = 56/73 (76%)
Frame = +2 / -1
Query: 221 EESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGE 400
+E SP MDHG + +GV+ PPASNPLLLTSSAH PPAPAWLISSKKIPNSVSG+ R E
Sbjct: 393 DE*SPTMDHGQILEGVFCPPASNPLLLTSSAHNPPAPAWLISSKKIPNSVSGMGRPPPLE 214
Query: 401 ASTARVAVWVAST 439
AST +V S+
Sbjct: 213 ASTCKVTAGFGSS 175
>gb|BE521313.1|BE521313 M18H6STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M18H6 5', mRNA sequence
Length = 364
Score = 89.5 bits (189), Expect(2) = 6e-023
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CP+GGVGVYNPG+WGMNIEEGK Y + ++V+S DL+VSLTSSNG
Sbjct: 68 CPSGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLTSSNG 208
Score = 39.6 bits (80), Expect(2) = 6e-023
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1 / +2
Query: 201 RTSCFSRNIVALRMEVLCDN 142
R+SCF RN +ALRM+VLCD+
Sbjct: 2 RSSCFERNKIALRMDVLCDS 61
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,404,862,045
Number of Sequences: 1013581
Number of extensions: 20502357
Number of successful extensions: 214674
Number of sequences better than 1.0e-020: 21
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 39310100265
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)