TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.2
(534 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF370333.1| Arabidopsis thaliana putative betaine aldehy... 266 3e-070
ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde de... 266 3e-070
gb|AY062987.1| Arabidopsis thaliana putative betaine aldehy... 261 9e-069
gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana ... 218 6e-065
gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana ... 246 5e-064
gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveg... 239 4e-062
gb|AY093071.1| Arabidopsis thaliana similar to betaine alde... 239 4e-062
gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, compl... 239 4e-062
gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complet... 239 4e-062
ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde de... 239 4e-062
emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cD... 235 7e-061
dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldeh... 231 1e-059
dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldeh... 230 2e-059
gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana ... 226 5e-058
gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana ... 215 1e-054
gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana... 213 3e-054
gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana... 208 1e-052
gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana ... 207 2e-052
gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana... 174 4e-052
gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana ... 206 5e-052
gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana ... 206 5e-052
gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana ... 201 1e-050
gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana ... 199 7e-050
emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome... 87 1e-049
gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana ... 196 5e-049
gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thal... 196 5e-049
gb|BP817965.1|BP817965 BP817965 RAFL19 Arabidopsis thaliana... 118 7e-049
gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana ... 193 2e-048
gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana... 193 3e-048
gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana... 193 5e-048
gb|BP565560.1|BP565560 BP565560 RAFL14 Arabidopsis thaliana... 155 1e-047
gb|BP573063.1|BP573063 BP573063 RAFL14 Arabidopsis thaliana... 187 2e-046
gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana ... 185 7e-046
gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana... 185 7e-046
gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA c... 183 4e-045
gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana ... 183 4e-045
gb|BP618182.1|BP618182 BP618182 RAFL16 Arabidopsis thaliana... 181 1e-044
gb|AV819676.1|AV819676 AV819676 RAFL11 Arabidopsis thaliana... 180 3e-044
gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana... 112 1e-043
gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana ... 177 2e-043
gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana... 177 2e-043
gb|BP565479.1|BP565479 BP565479 RAFL14 Arabidopsis thaliana... 122 6e-043
gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana... 105 8e-043
gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana... 159 2e-042
gb|AC013258.5|AC013258 Arabidopsis thaliana chromosome 1 BA... 81 3e-042
gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana... 173 4e-042
emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cD... 172 5e-042
gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F... 81 6e-042
gb|BP619533.1|BP619533 BP619533 RAFL16 Arabidopsis thaliana... 164 7e-042
gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cD... 171 1e-041
gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana... 169 5e-041
gb|BP655656.1|BP655656 BP655656 RAFL19 Arabidopsis thaliana... 169 7e-041
gb|BP650560.1|BP650560 BP650560 RAFL19 Arabidopsis thaliana... 167 2e-040
gb|BP788626.1|BP788626 BP788626 RAFL7 Arabidopsis thaliana ... 167 2e-040
gb|BP646724.1|BP646724 BP646724 RAFL19 Arabidopsis thaliana... 166 3e-040
gb|T46358.1|T46358 9621 Lambda-PRL2 Arabidopsis thaliana cD... 166 5e-040
gb|BP640251.1|BP640251 BP640251 RAFL19 Arabidopsis thaliana... 130 2e-039
gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana... 164 2e-039
gb|BP591744.1|BP591744 BP591744 RAFL15 Arabidopsis thaliana... 133 4e-039
gb|BP671873.1|BP671873 BP671873 RAFL21 Arabidopsis thaliana... 129 4e-039
gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana ... 162 6e-039
gb|BP573802.1|BP573802 BP573802 RAFL14 Arabidopsis thaliana... 160 2e-038
gb|BP780945.1|BP780945 BP780945 RAFL7 Arabidopsis thaliana ... 160 3e-038
gb|BP632539.1|BP632539 BP632539 RAFL17 Arabidopsis thaliana... 117 4e-038
gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots ... 158 1e-037
gb|BP575643.1|BP575643 BP575643 RAFL14 Arabidopsis thaliana... 87 2e-037
gb|BP649934.1|BP649934 BP649934 RAFL19 Arabidopsis thaliana... 157 3e-037
gb|AV813977.1|AV813977 AV813977 RAFL9 Arabidopsis thaliana ... 90 7e-037
gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana... 154 2e-036
gb|BP569312.1|BP569312 BP569312 RAFL14 Arabidopsis thaliana... 80 5e-036
gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana... 95 6e-036
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 81 7e-036
gb|BP579190.1|BP579190 BP579190 RAFL14 Arabidopsis thaliana... 132 7e-036
gb|BP591372.1|BP591372 BP591372 RAFL15 Arabidopsis thaliana... 129 9e-036
gb|BP599404.1|BP599404 BP599404 RAFL16 Arabidopsis thaliana... 150 3e-035
gb|BP594053.1|BP594053 BP594053 RAFL15 Arabidopsis thaliana... 122 3e-035
gb|BP659169.1|BP659169 BP659169 RAFL19 Arabidopsis thaliana... 147 3e-034
gb|BP604583.1|BP604583 BP604583 RAFL16 Arabidopsis thaliana... 100 7e-032
gb|BP599421.1|BP599421 BP599421 RAFL16 Arabidopsis thaliana... 138 9e-032
gb|BP581681.1|BP581681 BP581681 RAFL14 Arabidopsis thaliana... 87 2e-031
gb|BP643545.1|BP643545 BP643545 RAFL19 Arabidopsis thaliana... 81 2e-031
gb|BP644564.1|BP644564 BP644564 RAFL19 Arabidopsis thaliana... 135 8e-031
gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thalia... 97 3e-030
gb|BP644765.1|BP644765 BP644765 RAFL19 Arabidopsis thaliana... 110 3e-030
gb|BP646298.1|BP646298 BP646298 RAFL19 Arabidopsis thaliana... 79 4e-030
gb|BP659178.1|BP659178 BP659178 RAFL19 Arabidopsis thaliana... 119 5e-030
gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thalia... 97 1e-029
gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana ... 131 1e-029
gb|BP628330.1|BP628330 BP628330 RAFL17 Arabidopsis thaliana... 131 1e-029
gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower... 128 1e-028
gb|BP619798.1|BP619798 BP619798 RAFL16 Arabidopsis thaliana... 79 3e-028
gb|BP641360.1|BP641360 BP641360 RAFL19 Arabidopsis thaliana... 79 1e-024
gb|AV782507.1|AV782507 AV782507 RAFL4 Arabidopsis thaliana ... 114 2e-024
gb|AV547618.1|AV547618 AV547618 Arabidopsis thaliana roots ... 114 2e-024
gb|AV567671.1|AV567671 AV567671 Arabidopsis thaliana green ... 114 2e-024
gb|BP786355.1|BP786355 BP786355 RAFL7 Arabidopsis thaliana ... 114 2e-024
gb|AY056398.1| Arabidopsis thaliana aldehyde dehydrogenase ... 114 2e-024
gb|AF349448.1| Arabidopsis thaliana aldehyde dehydrogenase ... 114 2e-024
emb|BX825724.1|CNS0A6CJ Arabidopsis thaliana Full-length cD... 114 2e-024
emb|CQ799192.1| Sequence 21 from Patent EP1411125 114 2e-024
dbj|AK221230.1| Arabidopsis thaliana mRNA for aldehyde dehy... 114 2e-024
ref|NM_113359.2| Arabidopsis thaliana ALDH2C4 (REDUCED EPID... 114 2e-024
gb|AW004153.1|AW004153 701502004 A. thaliana, Ohio State cl... 112 9e-024
gb|BP615396.1|BP615396 BP615396 RAFL16 Arabidopsis thaliana... 63 3e-023
gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana... 107 3e-022
gb|BP655451.1|BP655451 BP655451 RAFL19 Arabidopsis thaliana... 61 4e-022
gb|AV781623.1|AV781623 AV781623 RAFL3 Arabidopsis thaliana ... 104 2e-021
gb|AV520514.1|AV520514 AV520514 Arabidopsis thaliana aboveg... 104 2e-021
gb|AV534457.1|AV534457 AV534457 Arabidopsis thaliana flower... 104 2e-021
gb|AV537719.1|AV537719 AV537719 Arabidopsis thaliana roots ... 104 2e-021
gb|AV543627.1|AV543627 AV543627 Arabidopsis thaliana roots ... 104 2e-021
gb|AV548863.1|AV548863 AV548863 Arabidopsis thaliana roots ... 104 2e-021
gb|AF372911.1|AF372911 Arabidopsis thaliana AT3g48000/T17F1... 104 2e-021
gb|AY090443.1| Arabidopsis thaliana AT3g48000/T17F15_130 mR... 104 2e-021
gb|AF349447.1| Arabidopsis thaliana aldehyde dehydrogenase ... 104 2e-021
gb|AF327426.1| Arabidopsis thaliana putative (NAD+) aldehyd... 104 2e-021
gb|AF349522.1| Arabidopsis thaliana putative aldehyde dehyd... 104 2e-021
gb|BT000752.1| Arabidopsis thaliana clone RAFL09-59-P10 (R1... 104 2e-021
gb|BT006371.1| Arabidopsis thaliana At3g48000/T17F15_130 ge... 104 2e-021
emb|BX825892.1|CNS0A6B6 Arabidopsis thaliana Full-length cD... 104 2e-021
dbj|AB030820.1| Arabidopsis thaliana ALDH2 mRNA for aldehyd... 104 2e-021
emb|CQ799190.1| Sequence 19 from Patent EP1411125 104 2e-021
ref|NM_114669.2| Arabidopsis thaliana ALDH2B4 (ALDEHYDE DEH... 104 2e-021
gb|BP573904.1|BP573904 BP573904 RAFL14 Arabidopsis thaliana... 88 5e-021
>gb|AF370333.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1721
Score = 266 bits (576), Expect = 3e-070
Identities = 104/133 (78%), Positives = 115/133 (86%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI
Sbjct: 1209 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 1388
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL*
Sbjct: 1389 VWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL* 1568
Query: 365 TGMKFCLFH*NKY 403
F +F *N Y
Sbjct: 1569 DKH*FLIFP*NMY 1607
>ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde dehydrogenase/ oxidoreductase
AT3G48170 (ALDH10A9) mRNA, complete cds
Length = 1722
Score = 266 bits (576), Expect = 3e-070
Identities = 104/133 (78%), Positives = 115/133 (86%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI
Sbjct: 1217 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 1396
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL*
Sbjct: 1397 VWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL* 1576
Query: 365 TGMKFCLFH*NKY 403
F +F *N Y
Sbjct: 1577 DKH*FLIFP*NMY 1615
>gb|AY062987.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1543
Score = 261 bits (565), Expect = 9e-069
Identities = 101/128 (78%), Positives = 112/128 (87%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI
Sbjct: 1153 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 1332
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL*
Sbjct: 1333 VWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL* 1512
Query: 365 TGMKFCLF 388
F +F
Sbjct: 1513 DKH*FLIF 1536
>gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-N03 3',
mRNA sequence
Length = 699
Score = 218 bits (471), Expect(2) = 6e-065
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI
Sbjct: 496 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 317
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 313
+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+
Sbjct: 316 VWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQ 188
Score = 51.0 bits (105), Expect(2) = 6e-065
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2 / -1
Query: 314 YISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 186 YISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-P08 3',
mRNA sequence
Length = 414
Score = 246 bits (531), Expect = 5e-064
Identities = 95/125 (76%), Positives = 107/125 (85%)
Frame = +2 / -2
Query: 29 EVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQP 208
EVFGP LCVK FSTEDEAI+LAND+QYGLAGA++S D ERC R+S+ AGI+WVNCSQP
Sbjct: 413 EVFGPALCVKTFSTEDEAIQLANDSQYGLAGAILSNDLERCDRVSKAFQAGIVWVNCSQP 234
Query: 209 CFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLF 388
CFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F
Sbjct: 233 CFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIF 54
Query: 389 H*NKY 403
*N Y
Sbjct: 53 P*NMY 39
>gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD44b05F 3', mRNA
sequence
Length = 576
Score = 239 bits (517), Expect = 4e-062
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI
Sbjct: 504 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGI 325
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 324 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 154
>gb|AY093071.1| Arabidopsis thaliana similar to betaine aldehyde dehydrogenase
(At1g74920) mRNA, complete cds
Length = 1786
Score = 239 bits (517), Expect = 4e-062
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI
Sbjct: 1282 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGI 1461
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 1462 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 1632
>gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, complete sequence
Length = 1827
Score = 239 bits (517), Expect = 4e-062
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI
Sbjct: 1324 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGI 1503
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 1504 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 1674
>gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complete cds
Length = 1506
Score = 239 bits (517), Expect = 4e-062
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI
Sbjct: 1153 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGI 1332
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 1333 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 1503
>ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde dehydrogenase/ oxidoreductase
AT1G74920 (ALDH10A8) mRNA, complete cds
Length = 1827
Score = 239 bits (517), Expect = 4e-062
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI
Sbjct: 1324 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGI 1503
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 1504 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 1674
>emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB51ZG07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1705
Score = 235 bits (508), Expect = 7e-061
Identities = 89/117 (76%), Positives = 102/117 (87%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAN + YGL AVIS D ERC R+SE +AGI
Sbjct: 1262 TSMQIWREEVFGPVLCVKTFASEDEAIELANYSHYGLGAAVISNDTERCDRISEAFEAGI 1441
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 1442 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 1612
>dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldehyde dehydrogenase like
protein, complete cds, clone: RAFL22-71-E16
Length = 845
Score = 231 bits (499), Expect = 1e-059
Identities = 88/117 (75%), Positives = 101/117 (86%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPVLCVK F++EDEAIELAND+ GL AVIS D ERC R+S +AGI
Sbjct: 334 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSH*GLGAAVISNDTERCDRISVAFEAGI 513
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+W+NCSQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 514 VWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 684
>dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldehyde dehydrogenase like
protein, partial cds, clone: RAFL22-46-I18
Length = 498
Score = 230 bits (497), Expect = 2e-059
Identities = 86/112 (76%), Positives = 98/112 (87%)
Frame = +2 / +2
Query: 20 WREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNC 199
WREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI+W+NC
Sbjct: 2 WREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINC 181
Query: 200 SQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
SQPCF QAPWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 182 SQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 337
>gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-58-D22 3',
mRNA sequence
Length = 420
Score = 226 bits (487), Expect = 5e-058
Identities = 88/116 (75%), Positives = 99/116 (85%)
Frame = +2 / -2
Query: 56 KEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGG 235
K FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG
Sbjct: 419 KTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGG 240
Query: 236 NKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 239 TKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 72
>gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-48-L04 3',
mRNA sequence
Length = 401
Score = 215 bits (463), Expect = 1e-054
Identities = 83/110 (75%), Positives = 94/110 (85%)
Frame = +2 / -2
Query: 74 DEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGF 253
DEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGF
Sbjct: 400 DEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGF 221
Query: 254 GRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
GRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 220 GRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 71
>gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-J09 3',
mRNA sequence
Length = 431
Score = 213 bits (460), Expect = 3e-054
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = +2 / -1
Query: 74 DEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGF 253
DEAI+LAND+QYGLAGAV+S D +RC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGF
Sbjct: 410 DEAIQLANDSQYGLAGAVLSNDLDRCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGF 231
Query: 254 GRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
GRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 230 GRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 81
>gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-26-N04 3',
mRNA sequence
Length = 425
Score = 208 bits (448), Expect = 1e-052
Identities = 80/109 (73%), Positives = 92/109 (84%)
Frame = +2 / -3
Query: 77 EAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFG 256
EAI+LAND+QYGLAGAV+S D ERC R+ + AGI+WVNCSQPCFCQAPWGG KRSGFG
Sbjct: 423 EAIQLANDSQYGLAGAVLSNDLERCDRVIKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFG 244
Query: 257 RELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
RELGE G++NYLS+KQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 243 RELGEWGLENYLSLKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-N03 3',
mRNA sequence
Length = 426
Score = 207 bits (447), Expect = 2e-052
Identities = 80/108 (74%), Positives = 91/108 (84%)
Frame = +2 / -1
Query: 80 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGR 259
AI+LAND+QYGLAG V+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGR
Sbjct: 426 AIQLANDSQYGLAGPVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGR 247
Query: 260 ELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
ELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 246 ELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 103
>gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-47-K10 3',
mRNA sequence
Length = 433
Score = 174 bits (375), Expect(2) = 4e-052
Identities = 67/86 (77%), Positives = 76/86 (88%)
Frame = +2 / -3
Query: 53 VKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWG 232
VK FSTEDEAI+LAND+QYGL GAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWG
Sbjct: 431 VKTFSTEDEAIQLANDSQYGLPGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWG 252
Query: 233 GNKRSGFGRELGEGGIDNYLSVKQVT 310
G KRSGFGRELGE G++NYLSVKQV+
Sbjct: 251 GTKRSGFGRELGEWGLENYLSVKQVS 174
Score = 51.9 bits (107), Expect(2) = 4e-052
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2 / -1
Query: 311 EYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 172 QYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 80
>gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-N19 3',
mRNA sequence
Length = 415
Score = 206 bits (444), Expect = 5e-052
Identities = 79/106 (74%), Positives = 90/106 (84%)
Frame = +2 / -2
Query: 86 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGREL 265
+LAND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGREL
Sbjct: 414 QLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGREL 235
Query: 266 GEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
GE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 234 GEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-32-J20 3',
mRNA sequence
Length = 416
Score = 206 bits (444), Expect = 5e-052
Identities = 79/106 (74%), Positives = 90/106 (84%)
Frame = +2 / -3
Query: 86 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGREL 265
+LAND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGREL
Sbjct: 414 QLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGREL 235
Query: 266 GEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
GE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 234 GEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-40-B16 3',
mRNA sequence
Length = 406
Score = 201 bits (434), Expect = 1e-050
Identities = 77/103 (74%), Positives = 87/103 (84%)
Frame = +2 / -2
Query: 95 NDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEG 274
ND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE
Sbjct: 405 NDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEW 226
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 225 GLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-N24 3',
mRNA sequence
Length = 413
Score = 199 bits (428), Expect = 7e-050
Identities = 79/111 (71%), Positives = 90/111 (81%)
Frame = +2 / -2
Query: 71 EDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSG 250
EDEAI+LAND+QYGL GAV+S D ER R+S+ AGI+WVNCSQPCF QAPWGG K SG
Sbjct: 412 EDEAIQLANDSQYGLPGAVLSNDLERFDRVSKAFQAGIVWVNCSQPCFSQAPWGGTKPSG 233
Query: 251 FGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
FG ELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 232 FGPELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 80
>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20
Length = 103889
Score = 87.2 bits (184), Expect(4) = 1e-049
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +2 / -3
Query: 164 EEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE
Sbjct: 20352 QAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGE 20245
Score = 76.7 bits (161), Expect(4) = 1e-049
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2 / -2
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 20092 GLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 19964
Score = 76.2 bits (160), Expect(4) = 1e-049
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 106
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+Q
Sbjct: 20697 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQ 20596
Score = 37.7 bits (76), Expect(4) = 1e-049
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2 / -3
Query: 104 QYGLAGAVISGDRERCQRLSE 166
+YGLAGAV+S D ERC R+S+
Sbjct: 20511 RYGLAGAVLSNDLERCDRVSK 20449
>gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-39-A17 3',
mRNA sequence
Length = 410
Score = 196 bits (422), Expect = 5e-049
Identities = 75/101 (74%), Positives = 85/101 (84%)
Frame = +2 / -2
Query: 101 TQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGI 280
+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE G+
Sbjct: 409 SQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGL 230
Query: 281 DNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
+NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 229 ENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 107
>gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP199 3',
mRNA sequence
Length = 406
Score = 196 bits (422), Expect = 5e-049
Identities = 75/101 (74%), Positives = 85/101 (84%)
Frame = +2 / +2
Query: 101 TQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGI 280
+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE G+
Sbjct: 2 SQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGL 181
Query: 281 DNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
+NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 182 ENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 304
>gb|BP817965.1|BP817965 BP817965 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-46-I18 5',
mRNA sequence
Length = 394
Score = 118 bits (252), Expect(2) = 7e-049
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2 / +1
Query: 20 WREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNC 199
WREEVFGPVLCVK F++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI+W+NC
Sbjct: 1 WREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINC 180
Score = 97.3 bits (206), Expect(2) = 7e-049
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2 / +2
Query: 224 PWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
PWGG KRSGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 209 PWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 340
>gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-16-L22 3',
mRNA sequence
Length = 444
Score = 193 bits (417), Expect = 2e-048
Identities = 72/97 (74%), Positives = 84/97 (86%)
Frame = +2 / -3
Query: 65 STEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKR 244
++EDEAIELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KR
Sbjct: 442 ASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKR 263
Query: 245 SGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
SGFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 262 SGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 152
>gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-E24 3',
mRNA sequence
Length = 460
Score = 193 bits (416), Expect = 3e-048
Identities = 72/96 (75%), Positives = 83/96 (86%)
Frame = +2 / -1
Query: 68 TEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRS 247
+EDEAIELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRS
Sbjct: 457 SEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRS 278
Query: 248 GFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
GFGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 277 GFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 170
>gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-49-E20 3',
mRNA sequence
Length = 436
Score = 193 bits (415), Expect = 5e-048
Identities = 72/95 (75%), Positives = 82/95 (86%)
Frame = +2 / -2
Query: 71 EDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSG 250
EDEAIELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSG
Sbjct: 435 EDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSG 256
Query: 251 FGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
FGRELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 255 FGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 151
>gb|BP565560.1|BP565560 BP565560 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-50-G07 3',
mRNA sequence
Length = 447
Score = 155 bits (332), Expect(3) = 1e-047
Identities = 59/79 (74%), Positives = 67/79 (84%)
Frame = +2 / -1
Query: 56 KEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGG 235
K FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG
Sbjct: 447 KTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGG 268
Query: 236 NKRSGFGRELGEGGIDNYL 292
K SGFGRELGE G++ L
Sbjct: 267 TKPSGFGRELGEWGLEKLL 211
Score = 51.9 bits (107), Expect(3) = 1e-047
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2 / -3
Query: 311 EYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 190 QYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 98
Score = 23.5 bits (45), Expect(3) = 1e-047
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 272 GGIDNYLSVKQVT 310
G + NYLSVKQV+
Sbjct: 230 GDLRNYLSVKQVS 192
>gb|BP573063.1|BP573063 BP573063 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-82-L22 3',
mRNA sequence
Length = 457
Score = 187 bits (403), Expect = 2e-046
Identities = 76/119 (63%), Positives = 91/119 (76%)
Frame = +2 / -2
Query: 47 LCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAP 226
LCVK FSTEDEAI+LAND+QYGLAG ++S ERC +S+ AGIIWV+CSQPCFC P
Sbjct: 453 LCVKTFSTEDEAIQLANDSQYGLAGPILSNYLERCDPVSKAFQAGIIWVHCSQPCFCPTP 274
Query: 227 WGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
WGG + +GFG LGE G++NYL+VKQVT+YIS PWG Y+ PSKL* F +F *N Y
Sbjct: 273 WGGTQPNGFGP*LGEWGLENYLNVKQVTQYISY*PWGLYQPPSKL*DQH*FLIFP*NMY 97
>gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-E12 3',
mRNA sequence
Length = 426
Score = 185 bits (399), Expect = 7e-046
Identities = 69/92 (75%), Positives = 79/92 (85%)
Frame = +2 / -1
Query: 80 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGR 259
AIELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGR
Sbjct: 426 AIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGR 247
Query: 260 ELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
ELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 246 ELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 151
>gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-P07 3',
mRNA sequence
Length = 428
Score = 185 bits (399), Expect = 7e-046
Identities = 69/92 (75%), Positives = 79/92 (85%)
Frame = +2 / -2
Query: 80 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGR 259
AIELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGR
Sbjct: 427 AIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGR 248
Query: 260 ELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
ELGE G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 247 ELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 152
>gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA clone F3F6T7, mRNA sequence
Length = 482
Score = 183 bits (394), Expect = 4e-045
Identities = 70/98 (71%), Positives = 79/98 (80%)
Frame = +2 / -3
Query: 110 GLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNY 289
GLA AV+ D ERC R+S+ AGI+WVNCSQPCFC APWGG KRSGFGRELGE G++NY
Sbjct: 336 GLAAAVLXNDLERCDRVSKAFQAGIVWVNCSQPCFCXAPWGGTKRSGFGRELGEWGLENY 157
Query: 290 LSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
LSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 156 LSVKQVTQYISDEPWGWYKPPSKL*XKH*FLIFP*NMY 43
>gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-94-K24 3',
mRNA sequence
Length = 402
Score = 183 bits (394), Expect = 4e-045
Identities = 70/96 (72%), Positives = 79/96 (82%)
Frame = +2 / -2
Query: 116 AGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS 295
AG V+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLS
Sbjct: 401 AGPVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLS 222
Query: 296 VKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
VKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 221 VKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 114
>gb|BP618182.1|BP618182 BP618182 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-D14 3',
mRNA sequence
Length = 452
Score = 181 bits (390), Expect = 1e-044
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = +2 / -3
Query: 74 DEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGF 253
DEAIELAND+ YGL A+IS D ERC +SE +AGI+W+NCSQPCF QAPWGG KRSGF
Sbjct: 432 DEAIELANDSHYGLGAALISNDTERCDLISEAFEAGIVWINCSQPCFTQAPWGGVKRSGF 253
Query: 254 GRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
GRELGE +DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 252 GRELGEW*LDNYLSVKQVTLYTSNDPWGWYKSPN 151
>gb|AV819676.1|AV819676 AV819676 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-06-F18 3',
mRNA sequence
Length = 421
Score = 180 bits (387), Expect = 3e-044
Identities = 66/90 (73%), Positives = 77/90 (85%)
Frame = +2 / -1
Query: 86 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGREL 265
ELAND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGREL
Sbjct: 421 ELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGREL 242
Query: 266 GEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
GE G++NYLSVKQVT Y S++PWGWY+SP+
Sbjct: 241 GEWGLENYLSVKQVTLYTSNDPWGWYKSPN 152
>gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-36-J17 3',
mRNA sequence
Length = 436
Score = 112 bits (239), Expect(3) = 1e-043
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2 / -3
Query: 113 LAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
LAGAV+S D ERC R+S+ AGI+W NCSQPCFCQAPWGG KRSGFGRELGE
Sbjct: 401 LAGAVLSNDLERCDRVSKAFQAGIVWFNCSQPCFCQAPWGGTKRSGFGRELGE 243
Score = 79.0 bits (166), Expect(3) = 1e-043
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2 / -2
Query: 263 LGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
+G G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 252 IGRMGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 112
Score = 24.9 bits (48), Expect(3) = 1e-043
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 77 EAIELANDTQY 109
EAI+LAND+QY
Sbjct: 436 EAIQLANDSQY 404
>gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-03-J10 3',
mRNA sequence
Length = 417
Score = 177 bits (382), Expect = 2e-043
Identities = 65/88 (73%), Positives = 75/88 (85%)
Frame = +2 / -3
Query: 92 ANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
AND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 415 ANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGE 236
Query: 272 GGIDNYLSVKQVTEYISDEPWGWYRSPS 355
G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 235 WGLDNYLSVKQVTLYTSNDPWGWYKSPN 152
>gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-03-A05 3',
mRNA sequence
Length = 429
Score = 177 bits (381), Expect = 2e-043
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +2 / -2
Query: 92 ANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
AND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 416 ANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGE 237
Query: 272 GGIDNYLSVKQVTEYISDEPWGWYRSP 352
G+DNYLSVKQVT Y S++PWGWY+SP
Sbjct: 236 WGLDNYLSVKQVTLYTSNDPWGWYKSP 156
>gb|BP565479.1|BP565479 BP565479 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-50-A08 3',
mRNA sequence
Length = 442
Score = 122 bits (262), Expect(2) = 6e-043
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2 / -3
Query: 62 FSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGG 235
FSTEDEAI+LAND+QYGL GAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG
Sbjct: 437 FSTEDEAIQLANDSQYGLPGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGG 264
Score = 73.0 bits (153), Expect(2) = 6e-043
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = +2 / -2
Query: 230 GGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
G KRSGFGR G + +QVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 270 GWTKRSGFGRNWENGDLRTT*V*RQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 97
>gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-89-K10 3',
mRNA sequence
Length = 427
Score = 105 bits (224), Expect(2) = 8e-043
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +2 / -1
Query: 113 LAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGG 277
LAGAV+S D ERC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFG +G G
Sbjct: 403 LAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGP*IGRMG 239
Score = 90.0 bits (190), Expect(2) = 8e-043
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +2 / -2
Query: 254 GRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
GRELGE G++NYLSVKQVT+YISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 261 GRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL*DKH*FLIFP*NMY 112
>gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P16 3',
mRNA sequence
Length = 445
Score = 159 bits (341), Expect(2) = 2e-042
Identities = 59/81 (72%), Positives = 67/81 (82%)
Frame = +2 / -2
Query: 146 RCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 325
RC R+S+ AGI+WVNCSQPCFCQAPWGG K SGFG ELGE G++NYLSVKQVT+YISD
Sbjct: 366 RCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKPSGFGPELGEWGLENYLSVKQVTQYISD 187
Query: 326 EPWGWYRSPSKL*TGMKFCLF 388
EPWGWY+ PSKL* F +F
Sbjct: 186 EPWGWYKPPSKL*DKH*FLIF 124
Score = 35.4 bits (71), Expect(2) = 2e-042
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / -1
Query: 89 LANDTQYGLAGAVISGDRE 145
LAND+QYGLAG V+S D E
Sbjct: 424 LANDSQYGLAGPVLSNDLE 368
>gb|AC013258.5|AC013258 Arabidopsis thaliana chromosome 1 BAC F9E10 genomic sequence, complete
sequence
Length = 97263
Score = 81.3 bits (171), Expect(4) = 3e-042
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2 / +2
Query: 173 DAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
+AGI+W+NCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 63905 EAGIVWINCSQPCFTQAPWGGVKRSGFGRELGE 64003
Score = 74.8 bits (157), Expect(4) = 3e-042
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 106
TSM+IWREEVFGPVLCVK F++EDEAIELAND+Q
Sbjct: 63511 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSQ 63612
Score = 59.7 bits (124), Expect(4) = 3e-042
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2 / +2
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPS 355
G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 64109 GLDNYLSVKQVTLYTSNDPWGWYKSPN 64189
Score = 36.3 bits (73), Expect(4) = 3e-042
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 107 YGLAGAVISGDRERCQRLSE 166
YGL AVIS D ERC R+SE
Sbjct: 63736 YGLGAAVISNDTERCDRISE 63795
>gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-01-I03 3',
mRNA sequence
Length = 409
Score = 173 bits (372), Expect = 4e-042
Identities = 63/86 (73%), Positives = 73/86 (84%)
Frame = +2 / -2
Query: 98 DTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGG 277
D+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG KRSGFGRELGE G
Sbjct: 408 DSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWG 229
Query: 278 IDNYLSVKQVTEYISDEPWGWYRSPS 355
+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 228 LDNYLSVKQVTLYTSNDPWGWYKSPN 151
>emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS32ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1648
Score = 172 bits (371), Expect = 5e-042
Identities = 67/91 (73%), Positives = 74/91 (81%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGP LCVK FSTEDEAI+LAND+QYGLAGAV+S D ERC R+S+ AGI
Sbjct: 1179 TSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGI 1358
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGG 277
+WVNCSQPCFCQAPWGG KR +G G
Sbjct: 1359 VWVNCSQPCFCQAPWGGTKRQWIWP*IGRMG 1451
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence
Length = 115721
Score = 81.3 bits (171), Expect(4) = 6e-042
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2 / +3
Query: 173 DAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 271
+AGI+W+NCSQPCF QAPWGG KRSGFGRELGE
Sbjct: 35568 EAGIVWINCSQPCFTQAPWGGVKRSGFGRELGE 35666
Score = 74.8 bits (157), Expect(4) = 6e-042
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 106
TSM+IWREEVFGPVLCVK F++EDEAIELAND+Q
Sbjct: 35174 TSMQIWREEVFGPVLCVKTFASEDEAIELANDSQ 35275
Score = 59.7 bits (124), Expect(4) = 6e-042
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2 / +3
Query: 275 GIDNYLSVKQVTEYISDEPWGWYRSPS 355
G+DNYLSVKQVT Y S++PWGWY+SP+
Sbjct: 35772 GLDNYLSVKQVTLYTSNDPWGWYKSPN 35852
Score = 36.3 bits (73), Expect(4) = 6e-042
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 107 YGLAGAVISGDRERCQRLSE 166
YGL AVIS D ERC R+SE
Sbjct: 35399 YGLGAAVISNDTERCDRISE 35458
>gb|BP619533.1|BP619533 BP619533 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-K02 3',
mRNA sequence
Length = 446
Score = 164 bits (352), Expect(2) = 7e-042
Identities = 64/91 (70%), Positives = 74/91 (81%)
Frame = +2 / -3
Query: 65 STEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKR 244
++EDEAIEL ND+ YGL AVIS D ERC R+SE +AGI+W+NCSQPCF QAPWGG K
Sbjct: 444 ASEDEAIELPNDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKP 265
Query: 245 SGFGRELGEGGIDNYLSVKQVTEYISDEPWG 337
SGFGRELGE G+DNYLSVKQVT Y S++ G
Sbjct: 264 SGFGRELGEWGLDNYLSVKQVTLYTSNDALG 172
Score = 28.6 bits (56), Expect(2) = 7e-042
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 329 PWGWYRSPS 355
PWGWY+SP+
Sbjct: 179 PWGWYKSPN 153
>gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cDNA clone E3E2T7, mRNA sequence
Length = 545
Score = 171 bits (369), Expect = 1e-041
Identities = 65/89 (73%), Positives = 73/89 (82%)
Frame = +2 / -2
Query: 137 DRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEY 316
D RC R+S+ AGI+WVNCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+Y
Sbjct: 295 DLXRCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQY 116
Query: 317 ISDEPWGWYRSPSKL*TGMKFCLFH*NKY 403
ISDEPWGWY+ PSKL* F +F *N Y
Sbjct: 115 ISDEPWGWYKPPSKL*DKH*FLIFP*NMY 29
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,080,558,958
Number of Sequences: 1013581
Number of extensions: 13832944
Number of successful extensions: 232127
Number of sequences better than 1.0e-020: 131
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 30162466870
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)