TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3148257.2.1
(675 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 179 6e-044
emb|AX059538.1| Sequence 271 from Patent WO0055325 179 6e-044
gb|AY050990.1| Arabidopsis thaliana putative glucan synthas... 179 6e-044
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 179 6e-044
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 179 6e-044
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 179 6e-044
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 179 6e-044
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 179 6e-044
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 111 5e-039
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 111 5e-039
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 111 5e-039
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 111 5e-039
emb|AX506240.1| Sequence 935 from Patent WO0216655 111 5e-039
gb|AV543953.1|AV543953 AV543953 Arabidopsis thaliana roots ... 111 7e-036
emb|AL091425.1|CNS00UTF Arabidopsis thaliana genome survey ... 151 2e-035
gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots ... 129 7e-029
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 129 7e-029
emb|AX412747.1| Sequence 511 from Patent WO0222675 129 7e-029
emb|AX508002.1| Sequence 2697 from Patent WO0216655 129 7e-029
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 129 7e-029
gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower... 129 1e-028
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 129 1e-028
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 129 1e-028
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 127 2e-028
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 126 9e-028
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 126 9e-028
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 126 9e-028
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 126 9e-028
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 126 9e-028
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 126 9e-028
gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveg... 125 1e-027
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 125 1e-027
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 125 1e-027
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 125 1e-027
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 125 1e-027
gb|CD531728.1|CD531728 11N08 Arabidopsis Leaf Senescence Li... 89 2e-027
gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-... 123 4e-027
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 123 4e-027
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 123 6e-027
gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower... 122 8e-027
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 122 1e-026
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 121 3e-026
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 121 3e-026
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 119 8e-026
gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-... 119 1e-025
gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana ... 118 2e-025
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 117 4e-025
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 100 7e-025
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 99 2e-024
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 99 2e-024
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 99 2e-024
emb|AX441264.1| Sequence 18 from Patent EP1209228 99 2e-024
dbj|BD181338.1| A stress-responsive promoter 99 2e-024
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 112 1e-023
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 112 1e-023
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 88 3e-023
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 94 4e-023
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 95 6e-023
gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana... 95 6e-023
gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana ... 95 2e-022
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 95 7e-022
emb|AX651854.1| Sequence 720 from Patent WO03000898 89 9e-021
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 12619 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 12798
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 12799 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 12918
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -1
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 12912 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 12733
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 12732 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 12553
Query: 44 VLL 36
+LL
Sbjct: 12552 MLL 12544
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -2
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 12908 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 12729
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 12728 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 12621
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +2
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 3122 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 3301
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 3302 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 3421
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -2
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 3415 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 3236
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 3235 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 3056
Query: 44 VLL 36
+LL
Sbjct: 3055 MLL 3047
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -3
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 3411 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 3232
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 3231 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 3124
>gb|AY050990.1| Arabidopsis thaliana putative glucan synthase (At4g04970) mRNA,
partial cds
Length = 1764
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +2
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 923 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 1102
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 1103 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 1222
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -3
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 1216 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 1037
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 1036 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 857
Query: 44 VLL 36
+LL
Sbjct: 856 MLL 848
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -1
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 1212 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 1033
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 1032 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 925
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / -1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 178965 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 178786
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 178785 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 178666
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / +1
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 178672 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 178851
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 178852 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 179031
Query: 44 VLL 36
+LL
Sbjct: 179032 MLL 179040
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / +2
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 178676 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 178855
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 178856 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 178963
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 2540947 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 2541126
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 2541127 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 2541246
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -1
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 2541240 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 2541061
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 2541060 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 2540881
Query: 44 VLL 36
+LL
Sbjct: 2540880 MLL 2540872
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -2
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 2541236 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 2541057
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 2541056 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 2540949
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 1577805 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 1577984
Query: 402 KRT 410
K++
Sbjct: 1577985 KKS 1577993
Score = 72.1 bits (151), Expect(2) = 6e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / -3
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 1577995 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 1577816
Query: 232 QTTV 221
Q V
Sbjct: 1577815 QKIV 1577804
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / +3
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 1577691 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 1577813
Score = 60.6 bits (126), Expect(2) = 6e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / -2
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 1577786 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 1577607
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 1577606 LVTGVL 1577589
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 1577595 ARDKYSAKAHIRYR 1577636
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +2
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 74144 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 74323
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 74324 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 74443
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -2
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 74437 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 74258
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 74257 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 74078
Query: 44 VLL 36
+LL
Sbjct: 74077 MLL 74069
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -3
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 74433 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 74254
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 74253 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 74146
>ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHASE LIKE-1); 1,3-beta-glucan
synthase/ transferase, transferring glycosyl groups
AT4G04970 (ATGSL1) mRNA, complete cds
Length = 5827
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 5002 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 5181
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 5182 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 5301
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -2
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 5295 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 5116
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 5115 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 4936
Query: 44 VLL 36
+LL
Sbjct: 4935 MLL 4927
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -3
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 5291 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 5112
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 5111 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 5004
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 179 bits (386), Expect = 6e-044
Identities = 69/100 (69%), Positives = 87/100 (87%)
Frame = +3 / +2
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 2542127 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 2542306
Query: 291 APVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
APVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 2542307 APVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKKS 2542426
Score = 118 bits (252), Expect = 2e-025
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = -2 / -3
Query: 404 FPSKNTGYLEAPAKTFIEKYPCLHFLKSRQPGQQCNWCHNEHSKQYLIQTSHRNNTVPDH 225
F S+N L AK+FIE+ PCLH LK+ QP +QCNW HN K+ +++ SHR+ VP+H
Sbjct: 2542420 FASENDRNL*PSAKSFIEQNPCLHILKTGQP*KQCNWSHNYQPKEKVVKASHRDYCVPNH 2542241
Query: 224 SGFDEWPNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVK 45
+ YLS RNQ+P NK Q+T + +N KF ELQ + H + K + LN +
Sbjct: 2542240 C**QKRFQYLSYRNQSPACGNKSQETYQQINYCKFSELQHHHDHKNRKENY*ELNESIFY 2542061
Query: 44 VLL 36
+LL
Sbjct: 2542060 MLL 2542052
Score = 117 bits (251), Expect = 3e-025
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = -3 / -1
Query: 400 PVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILSQTTV 221
P R+ +I PLLK SL VCI * PGN +SNATGAI +P S KRATEI +SQTTV
Sbjct: 2542416 PARMIEICNPLLKASLNKIRVCIF*KPGNHESNATGAITISPKKRS*KRATEITVSQTTV 2542237
Query: 220 DSMNGRIT*AIEIKPQPVGINAKRLVKMSMI*NSVN 113
D+ NG T*AIEI PQPVG AKRL+ S + VN
Sbjct: 2542236 DNRNGFST*AIEINPQPVGTKAKRLINKSTTVSLVN 2542129
Score = 111 bits (238), Expect = 2e-023
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 1578990 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 1579169
Query: 402 KRT 410
K++
Sbjct: 1579170 KKS 1579178
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
Length = 159629
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +1
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 39709 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 39888
Query: 402 KRT 410
K++
Sbjct: 39889 KKS 39897
Score = 72.1 bits (151), Expect(2) = 6e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / -1
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 39899 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 39720
Query: 232 QTTV 221
Q V
Sbjct: 39719 QKIV 39708
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / +1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 39595 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 39717
Score = 60.6 bits (126), Expect(2) = 6e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / -3
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 39690 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 39511
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 39510 LVTGVL 39493
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 39499 ARDKYSAKAHIRYR 39540
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
sequence
Length = 116448
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 18432 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 18611
Query: 402 KRT 410
K++
Sbjct: 18612 KKS 18620
Score = 72.1 bits (151), Expect(2) = 6e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / -3
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 18622 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 18443
Query: 232 QTTV 221
Q V
Sbjct: 18442 QKIV 18431
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / +3
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 18318 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 18440
Score = 60.6 bits (126), Expect(2) = 6e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / -2
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 18413 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 18234
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 18233 LVTGVL 18216
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 18222 ARDKYSAKAHIRYR 18263
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM,
complete sequence
Length = 95519
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / -1
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 13352 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 13173
Query: 402 KRT 410
K++
Sbjct: 13172 KKS 13164
Score = 72.1 bits (151), Expect(2) = 6e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / +1
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 13162 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 13341
Query: 232 QTTV 221
Q V
Sbjct: 13342 QKIV 13353
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / -1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 13466 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 13344
Score = 60.6 bits (126), Expect(2) = 6e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / +3
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 13371 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 13550
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 13551 LVTGVL 13568
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 13562 ARDKYSAKAHIRYR 13521
>ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTHASE-LIKE 5);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT4G03550 (ATGSL05) mRNA, complete cds
Length = 5835
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +1
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 5305 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 5484
Query: 402 KRT 410
K++
Sbjct: 5485 KKS 5493
Score = 72.1 bits (151), Expect(2) = 7e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / -2
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 5495 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 5316
Query: 232 QTTV 221
Q V
Sbjct: 5315 QKIV 5304
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / +1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 5191 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 5313
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / -1
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 5286 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 5107
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 5106 LVTGVL 5089
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 5095 ARDKYSAKAHIRYR 5136
>emb|AX506240.1| Sequence 935 from Patent WO0216655
Length = 5273
Score = 111 bits (238), Expect(3) = 5e-039
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 5070 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 5249
Query: 402 KRT 410
K++
Sbjct: 5250 KKS 5258
Score = 72.1 bits (151), Expect(2) = 7e-024
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = -3 / -2
Query: 412 FVLFPVRIRDIWRPLLKPSLKSTLVCIS*NPGNQDSNATGAIMNTPSSISYKRATEIILS 233
F FPV I + PLLK SL + LVCI NPG D NATG IM+ P+++SY RATE
Sbjct: 5260 FDFFPVTICMMRSPLLKASLNNILVCIDWNPGIHDKNATGTIMSIPNNMSYMRATETTAF 5081
Query: 232 QTTV 221
Q V
Sbjct: 5080 QKIV 5069
Score = 61.1 bits (127), Expect(3) = 5e-039
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / +3
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 4956 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 5078
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2 / -1
Query: 206 PNYLSDRNQAPTSRNKCQKTSEDVNDLKFRELQKQNQH*HYKSDDSSLNNPVVKVLLCGI 27
P L D+ +P S ++C+K ED+++ + REL++ N H + K D L+ PV V C +
Sbjct: 5051 PLSLCDQQNSPASWDECKKACEDIDEAEMRELEQSNNHQYSKHDQEELDKPVPYVSFCRV 4872
Query: 26 LVSSLV 9
LV+ ++
Sbjct: 4871 LVTGVL 4854
Score = 28.6 bits (56), Expect(3) = 5e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 15 ARDKYAAKQHLYYR 56
ARDKY+AK H+ YR
Sbjct: 4860 ARDKYSAKAHIRYR 4901
>gb|AV543953.1|AV543953 AV543953 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ29a05F 3', mRNA sequence
Length = 671
Score = 111 bits (238), Expect(2) = 7e-036
Identities = 40/63 (63%), Positives = 55/63 (87%)
Frame = +3 / -1
Query: 222 TVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
T+ W++++SVAR+Y+IL G+ IM PVA LSW+PGFQ MQTR+LFNE FSRGL+I +I+TG
Sbjct: 503 TIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTG 324
Query: 402 KRT 410
K++
Sbjct: 323 KKS 315
Score = 61.1 bits (127), Expect(2) = 7e-036
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3 / -1
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVW 233
+FT F IDIFTSLLAFIPTGWG++ IAQ R ++++ ++
Sbjct: 617 EFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIF 495
>emb|AL091425.1|CNS00UTF Arabidopsis thaliana genome survey sequence SP6 end of BAC T7O15 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 288
Score = 151 bits (324), Expect = 2e-035
Identities = 56/82 (68%), Positives = 72/82 (87%)
Frame = +3 / -3
Query: 111 KFTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIM 290
+FT+ ++D+ SLLAF+PTGWGLISIAQV++PF+ STVVWD++ISVAR Y++ G+ +M
Sbjct: 247 QFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVM 68
Query: 291 APVALLSWLPGFQEMQTRVLFN 356
APVALLSWLPGFQ MQTR+LFN
Sbjct: 67 APVALLSWLPGFQNMQTRILFN 2
>gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL15c03F 3', mRNA sequence
Length = 544
Score = 129 bits (277), Expect = 7e-029
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +3 / -1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F +LAF+PTGWG++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 436 IKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 257
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 256 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 158
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 129 bits (277), Expect = 7e-029
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F +LAF+PTGWG++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 5554 IKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 5733
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 5734 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 5832
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 129 bits (277), Expect = 7e-029
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F +LAF+PTGWG++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 5269 IKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 5448
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 5449 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 5547
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 129 bits (277), Expect = 7e-029
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F +LAF+PTGWG++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 5269 IKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 5448
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 5449 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 5547
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 129 bits (277), Expect = 7e-029
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F +LAF+PTGWG++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 5554 IKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 5733
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 5734 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 5832
>gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101h07F 3', mRNA sequence
Length = 533
Score = 129 bits (276), Expect = 1e-028
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +3 / -3
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
DIF +LAF+PTGWG++ IAQ +P I+ W S+ ++AR YEIL+G+ + PVA L+W
Sbjct: 423 DIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAW 244
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 243 FPFVSEFQTRMLFNQAFSRGLQISRILGGQR 151
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 129 bits (276), Expect = 1e-028
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +3 / +3
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
DIF +LAF+PTGWG++ IAQ +P I+ W S+ ++AR YEIL+G+ + PVA L+W
Sbjct: 1968 DIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAW 2147
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 2148 FPFVSEFQTRMLFNQAFSRGLQISRILGGQR 2240
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 129 bits (276), Expect = 1e-028
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +3 / +1
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
DIF +LAF+PTGWG++ IAQ +P I+ W S+ ++AR YEIL+G+ + PVA L+W
Sbjct: 5578 DIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAW 5757
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 5758 FPFVSEFQTRMLFNQAFSRGLQISRILGGQR 5850
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 127 bits (273), Expect = 2e-028
Identities = 54/132 (40%), Positives = 74/132 (56%)
Frame = +3 / +1
Query: 18 RDKYAAKQHLYYRXXXXXXXXXXXXXXXXXXKFTEFQIIDIFTSLLAFIPTGWGLISIAQ 197
R ++ ++HL +R + D+ S LAF+PTGWGLI IAQ
Sbjct: 5521 RQLFSTRKHLVFRFFKVFVFVSILTIIITLANICHLSVKDLLVSCLAFLPTGWGLILIAQ 5700
Query: 198 VIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGL 377
+RP IE T +W+ +AR Y+ +GV + AP+A+L+WLP QTR LFNE F+R L
Sbjct: 5701 AVRPKIEGTSLWEFTQVLARAYDYGMGVVLFAPMAILAWLPIISAFQTRFLFNEAFNRRL 5880
Query: 378 QISRILTGKRTN 413
QI IL GK+ N
Sbjct: 5881 QIQPILAGKKKN 5916
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +2
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 14054 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 14233
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 14234 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 14341
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +1
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 96256 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 96435
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 96436 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 96543
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +1
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 5467 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 5646
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 5647 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 5754
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +1
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 5620 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 5799
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 5800 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 5907
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +1
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 5467 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 5646
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 5647 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 5754
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 126 bits (269), Expect = 9e-028
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3 / +2
Query: 114 FTEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMA 293
F + + DI SLLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I
Sbjct: 5712911 FLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFM 5713090
Query: 294 PVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
PV +L+W P E QTR+LFN+ FSRGLQI RIL G
Sbjct: 5713091 PVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 5713198
Score = 112 bits (239), Expect = 1e-023
Identities = 43/99 (43%), Positives = 64/99 (64%)
Frame = +3 / -3
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T+ I D+F +L FIPTGW L+S+A + + +W+++ R+Y+ +G+ I +P
Sbjct: 15462322 TDLSIPDMFACVLGFIPTGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSP 15462143
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTN 413
+ALLSW P Q+R+LFN+ FSRGL+IS IL G R N
Sbjct: 15462142 IALLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNRAN 15462026
>gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL30a04F 3', mRNA
sequence
Length = 626
Score = 125 bits (268), Expect = 1e-027
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +3 / -3
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 477 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 298
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 297 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 178
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 125 bits (268), Expect = 1e-027
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +3 / +2
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 1274 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 1453
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 1454 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 1573
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 125 bits (268), Expect = 1e-027
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +3 / +1
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 1003 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 1182
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 1183 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 1302
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 125 bits (268), Expect = 1e-027
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +3 / +3
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 618 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 797
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 798 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 917
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 125 bits (268), Expect = 1e-027
Identities = 51/100 (51%), Positives = 68/100 (68%)
Frame = +3 / +1
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 5488 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 5667
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 5668 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 5787
>gb|CD531728.1|CD531728 11N08 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 534
Score = 89.0 bits (188), Expect(2) = 2e-027
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / +1
Query: 276 GVFIMAPVALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRT 410
G+ +MAPVALLSWLPGFQ MQTR+LFNE FSRGLQIS IL GK++
Sbjct: 319 GLIVMAPVALLSWLPGFQNMQTRILFNEAFSRGLQISXILAGKKS 453
Score = 55.6 bits (115), Expect(2) = 2e-027
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +3 / +3
Query: 147 SLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILL 275
SL P +SIAQV++PF+ STVVWD++ISVAR Y++ L
Sbjct: 189 SLGLLFPQAGD*LSIAQVLKPFLLSTVVWDTVISVARFYDLFL 317
>gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548593, mRNA sequence
Length = 618
Score = 123 bits (264), Expect = 4e-027
Identities = 50/96 (52%), Positives = 67/96 (69%)
Frame = +3 / -3
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
+ DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I PVAL
Sbjct: 469 VTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALC 290
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
SW P QTR++FN+ FSRGL+IS IL G N+
Sbjct: 289 SWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNS 182
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 123 bits (264), Expect = 4e-027
Identities = 47/93 (50%), Positives = 64/93 (68%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F S+LAF+PTGW ++ I Q +R + WDS+ + R YE ++G+ I P+A+L
Sbjct: 5497 ISDLFASILAFLPTGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVL 5676
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
SW P E QTR+LFN+ FSRGLQIS IL GK+
Sbjct: 5677 SWFPFVSEFQTRLLFNQAFSRGLQISMILAGKK 5775
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 123 bits (263), Expect = 6e-027
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +3 / +3
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I DI +LAF+PTGWG++ IAQ +P + W S+ ++AR YEI++G+ + PVA L
Sbjct: 5736 IQDIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFL 5915
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G R
Sbjct: 5916 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHR 6014
>gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB084c02F 3', mRNA sequence
Length = 455
Score = 122 bits (262), Expect = 8e-027
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = +3 / -3
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
DI +LAF+PTGWG++ IAQ +P + W S+ ++AR YEI++G+ + PVA L+W
Sbjct: 453 DIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAW 274
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGLQISRIL G R
Sbjct: 273 FPFVSEFQTRMLFNQAFSRGLQISRILGGHR 181
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 122 bits (261), Expect = 1e-026
Identities = 50/100 (50%), Positives = 67/100 (67%)
Frame = +3 / +3
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI S+ARLY+ L+G+ I P
Sbjct: 774 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLP 953
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTGKRTNT 416
VAL SW P QTR++ N+ FSRGL+IS IL G N+
Sbjct: 954 VALCSWFPFVSTFQTRMMXNQAFSRGLEISLILAGDNPNS 1073
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 121 bits (258), Expect = 3e-026
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +3 / +3
Query: 117 TEFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAP 296
T + DIF +LAFIPTGWG++SIA +P ++ +W SI +ARLY+ L+G+ I P
Sbjct: 576 TPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRCLARLYDALMGMLIFLP 755
Query: 297 VALLSWLPGFQEMQTRVLFNEGFSRGLQISRILTG 401
VAL SW P QTR++FN+ FSRGL+IS IL G
Sbjct: 756 VALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAG 860
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 121 bits (258), Expect = 3e-026
Identities = 47/93 (50%), Positives = 67/93 (72%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
+ D+ S+LAF+PTGW ++ I QV+R I++ VWDS+ + R YE ++G+ I AP+A+L
Sbjct: 5500 LTDLSASVLAFLPTGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVL 5679
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
SW P E Q R+LFN+ FSRGLQIS IL G++
Sbjct: 5680 SWFPIVSEFQARLLFNQAFSRGLQISMILAGRK 5778
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 119 bits (255), Expect = 8e-026
Identities = 43/91 (47%), Positives = 66/91 (72%)
Frame = +3 / +1
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
D+F +LA IPTGWGL+ IAQ +P I+ +W ++++A +Y++++G + P+A ++W
Sbjct: 5287 DVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAW 5466
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGL ISRIL+G+R
Sbjct: 5467 FPFISEFQTRMLFNQAFSRGLHISRILSGQR 5559
>gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550178, mRNA sequence
Length = 626
Score = 119 bits (254), Expect = 1e-025
Identities = 47/93 (50%), Positives = 67/93 (72%)
Frame = +3 / -3
Query: 129 IIDIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALL 308
I D+F ++AF+PTG ++ IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L
Sbjct: 483 IKDLFICMVAFMPTGXXMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFL 304
Query: 309 SWLPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
+W P E QTR+LFN+ FSRGLQISRIL G+R
Sbjct: 303 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGQR 205
>gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana genomic clone LERAR55, DNA
sequence
Length = 668
Score = 118 bits (252), Expect = 2e-025
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = +3 / +3
Query: 150 LLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQ 329
LLAF+PTGW L+ I+QV RP +++ +W S+ ++AR YE ++GV I PV +L+W P
Sbjct: 15 LLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVS 194
Query: 330 EMQTRVLFNEGFSRGLQISRILTG 401
E QTR+LFN+ FSRGLQI RIL G
Sbjct: 195 EFQTRLLFNQAFSRGLQIQRILAG 266
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 117 bits (250), Expect = 4e-025
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = +3 / +3
Query: 135 DIFTSLLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSW 314
+IF LAF+PTGWG+ I Q +P I+ W S+ ++AR YEIL+G+ + PVA L+W
Sbjct: 1014 NIFLCRLAFMPTGWGM*LIEQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVASLAW 1193
Query: 315 LPGFQEMQTRVLFNEGFSRGLQISRILTGKR 407
P E QTR+LFN+ FSRGLQ SRIL G+R
Sbjct: 1194 FPFVSEFQTRMLFNQAFSRGLQFSRILGGQR 1286
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 100 bits (212), Expect(2) = 7e-025
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = +3 / -1
Query: 180 LISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNE 359
L IAQ +P I+ W S+ ++AR YEIL+G+ + PVA L+W P E QTR+LFN+
Sbjct: 89601 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 89422
Query: 360 GFSRGLQISRILTGKR 407
FSRGLQISRIL G+R
Sbjct: 89421 AFSRGLQISRILGGQR 89374
Score = 35.9 bits (72), Expect(2) = 7e-025
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3 / -2
Query: 135 DIFTSLLAFIPTGWGLISIA 194
DIF +LAF+PTGWG++ ++
Sbjct: 89765 DIFLCMLAFMPTGWGMLLVS 89706
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 99.1 bits (210), Expect(2) = 2e-024
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +3 / -2
Query: 189 IAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFS 368
IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L+W P E QTR+LFN+ FS
Sbjct: 1648004 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1647825
Query: 369 RGLQISRILTGKR 407
RGLQISRIL G+R
Sbjct: 1647824 RGLQISRILGGQR 1647786
Score = 93.6 bits (198), Expect(2) = 4e-023
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +3 / +1
Query: 180 LISIAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNE 359
++ I Q +R + WDS+ + R YE ++G+ I P+A+LSW P E QTR+LFN+
Sbjct: 1988638 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988817
Query: 360 GFSRGLQISRILTGKR 407
FSRGLQIS IL GK+
Sbjct: 1988818 AFSRGLQISMILAGKK 1988865
Score = 36.3 bits (73), Expect(2) = 4e-023
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 129 IIDIFTSLLAFIPTGWGLISIA 194
I D+F S+LAF+PTGW ++ ++
Sbjct: 1988497 ISDLFASILAFLPTGWAILLVS 1988562
Score = 35.4 bits (71), Expect(2) = 2e-024
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 129 IIDIFTSLLAFIPTGWGLISIA 194
I D+F +LAF+PTGWG++ ++
Sbjct: 1648162 IKDLFICMLAFMPTGWGMLLVS 1648097
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 99.1 bits (210), Expect(2) = 2e-024
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +3 / -3
Query: 189 IAQVIRPFIESTVVWDSIISVARLYEILLGVFIMAPVALLSWLPGFQEMQTRVLFNEGFS 368
IAQ +P I+ +W S+ ++AR YEI++G+ + PVA L+W P E QTR+LFN+ FS
Sbjct: 29652 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 29473
Query: 369 RGLQISRILTGKR 407
RGLQISRIL G+R
Sbjct: 29472 RGLQISRILGGQR 29434
Score = 35.4 bits (71), Expect(2) = 2e-024
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3 / -1
Query: 129 IIDIFTSLLAFIPTGWGLISIA 194
I D+F +LAF+PTGWG++ ++
Sbjct: 29810 IKDLFICMLAFMPTGWGMLLVS 29745
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,354,282,932
Number of Sequences: 1013581
Number of extensions: 18383605
Number of successful extensions: 141047
Number of sequences better than 1.0e-020: 72
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 41782433615
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)