TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115147.2.2
(1310 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY065431.1| Arabidopsis thaliana putative pectin methyle... 167 9e-062
ref|NM_121978.3| Arabidopsis thaliana pectinesterase AT5G19... 167 9e-062
gb|AY096559.1| Arabidopsis thaliana putative pectin methyle... 167 9e-062
emb|BX830327.1|CNS0A03P Arabidopsis thaliana Full-length cD... 105 3e-053
ref|NM_124941.1| Arabidopsis thaliana pectinesterase AT5G55... 100 4e-052
ref|NM_125562.1| Arabidopsis thaliana pectinesterase AT5G61... 121 2e-051
ref|NM_124123.3| Arabidopsis thaliana pectinesterase AT5G47... 155 5e-051
gb|AY102117.1| Arabidopsis thaliana AT5g47500/MNJ7_9 mRNA, ... 155 5e-051
emb|BX834011.1|CNS0A0HM Arabidopsis thaliana Full-length cD... 155 5e-051
gb|BT000565.1| Arabidopsis thaliana pectin methylesterase-l... 155 5e-051
emb|BX833551.1|CNS09YUC Arabidopsis thaliana Full-length cD... 155 2e-049
gb|AY087811.1| Arabidopsis thaliana clone 38574 mRNA, compl... 109 2e-049
emb|BX813591.1|CNS0ADPM Arabidopsis thaliana Full-length cD... 108 1e-048
gb|BT002992.1| Arabidopsis thaliana clone RAFL15-19-G04 (R2... 107 2e-048
ref|NM_105663.2| Arabidopsis thaliana pectinesterase AT1G69... 107 2e-048
gb|BT004063.1| Arabidopsis thaliana clone RAFL15-07-O07 (R2... 107 2e-047
ref|NM_120823.2| Arabidopsis thaliana pectinesterase AT5G07... 107 2e-047
gb|BT002768.1| Arabidopsis thaliana clone RAFL15-02-N23 (R2... 86 3e-045
ref|NM_120824.2| Arabidopsis thaliana pectinesterase AT5G07... 86 3e-045
gb|AY086762.1| Arabidopsis thaliana clone 27469 mRNA, compl... 86 3e-045
gb|BT005059.1| Arabidopsis thaliana clone U20202 putative p... 86 3e-045
ref|NM_120825.3| Arabidopsis thaliana pectinesterase AT5G07... 87 5e-045
ref|NM_129226.2| Arabidopsis thaliana pectinesterase AT2G36... 122 1e-044
gb|BT002906.1| Arabidopsis thaliana clone RAFL15-07-C17 (R2... 119 8e-044
ref|NM_100410.1| Arabidopsis thaliana pectinesterase AT1G05... 121 8e-044
gb|BT005685.1| Arabidopsis thaliana clone U50785 putative p... 100 3e-043
dbj|AK118362.1| Arabidopsis thaliana At3g17060 mRNA for put... 100 8e-043
gb|AY085221.1| Arabidopsis thaliana clone 13932 mRNA, compl... 100 8e-043
ref|NM_112582.1| Arabidopsis thaliana pectinesterase AT3G17... 100 8e-043
emb|BX830118.1|CNS0A06E Arabidopsis thaliana Full-length cD... 87 1e-042
ref|NM_129225.1| Arabidopsis thaliana pectinesterase AT2G36... 137 1e-041
gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 91 9e-039
ref|NM_127732.1| Arabidopsis thaliana pectinesterase AT2G21... 86 2e-035
dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosom... 89 5e-035
dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosom... 83 9e-035
dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosom... 91 8e-033
gb|AY096561.1| Arabidopsis thaliana putative pectinesterase... 78 1e-032
emb|BX826099.1|CNS0A58Q Arabidopsis thaliana Full-length cD... 78 1e-032
gb|AY070091.1| Arabidopsis thaliana putative pectinesterase... 78 2e-032
gb|AY084418.1| Arabidopsis thaliana clone 107962 mRNA, comp... 78 2e-032
ref|NM_113832.1| Arabidopsis thaliana pectinesterase AT3G29... 78 2e-032
gb|AC010675.6|AC010675 Arabidopsis thaliana chromosome 1 BA... 78 5e-032
emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5... 78 2e-031
gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1... 71 9e-029
ref|NM_127472.1| Arabidopsis thaliana pectinesterase AT2G19... 84 6e-028
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 78 8e-028
gb|AY201500.1|AY201500 AY201500 Arabidopsis thaliana Landsb... 78 3e-026
gb|CF773166.1|CF773166 AG_FSL_13G10 Arabidopsis ag-1 35S:AG... 121 6e-026
gb|CF773925.1|CF773925 AG_FSL_24F08 Arabidopsis ag-1 35S:AG... 121 6e-026
gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K... 100 9e-026
ref|NM_121904.1| Arabidopsis thaliana pectinesterase AT5G18... 70 9e-026
gb|DQ056581.1| Arabidopsis thaliana pectinesterase family p... 77 1e-025
ref|NM_180140.1| Arabidopsis thaliana pectinesterase AT2G47... 77 1e-025
gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC... 94 1e-024
dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosom... 68 2e-024
emb|BX842213.1|CNS09YDB Arabidopsis thaliana Full-length cD... 73 2e-024
ref|NM_122563.2| Arabidopsis thaliana pectinesterase AT5G26... 89 1e-023
emb|X58338.1|ATGLYRP A.thaliana gene encoding a glycine-ric... 68 1e-022
gb|BH235628.1|BH235628 AUHTA52TF AUHT Arabidopsis thaliana ... 77 1e-022
gb|DQ056606.1| Arabidopsis thaliana pectinesterase family p... 73 5e-022
ref|NM_113318.1| Arabidopsis thaliana pectinesterase AT3G24... 73 5e-022
gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome II... 72 2e-021
ref|NM_111434.2| Arabidopsis thaliana enzyme inhibitor/ pec... 72 2e-021
dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosom... 67 3e-021
ref|NM_125860.3| Arabidopsis thaliana enzyme inhibitor/ pec... 67 3e-021
gb|AY128320.1| Arabidopsis thaliana pectin methylesterase-l... 67 3e-021
gb|AY086163.1| Arabidopsis thaliana clone 21903 mRNA, compl... 67 8e-021
dbj|AK118374.1| Arabidopsis thaliana At3g05610 mRNA for put... 69 9e-021
gb|BT005948.1| Arabidopsis thaliana At3g05610 gene, complet... 69 9e-021
>gb|AY065431.1| Arabidopsis thaliana putative pectin methylesterase (At5g19730)
mRNA, complete cds
Length = 1352
Score = 167 bits (360), Expect(5) = 9e-062
Identities = 69/158 (43%), Positives = 92/158 (58%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
++EK+ + K FIT + + V W DTA T G P+GT SA+ AV S +F A
Sbjct: 471 YKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAK 650
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ FRN P+ PGA G QAVA+R+ + C + G QDTLYDH G HY+K C I G
Sbjct: 651 NITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEG 830
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIE 831
SVDFIFG S YE C + ++ ++ +TAQ RS +E
Sbjct: 831 SVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLE 944
Score = 54.2 bits (112), Expect(5) = 9e-062
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G +YLGRAWG SRVV++YT M ++P GW W E + Y
Sbjct: 987 GVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFY 1121
Score = 42.3 bits (86), Expect(5) = 9e-062
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
GA A RV WA +LT+ +AKPF+ ++ G WI+
Sbjct: 1140 GAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIK 1250
Score = 26.7 bits (52), Expect(5) = 9e-062
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1018 IYYGEFKCFGPGAD 1059
++YG++KC G GA+
Sbjct: 1113 VFYGQYKCTGAGAN 1154
Score = 24.4 bits (47), Expect(5) = 9e-062
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +3
Query: 841 DTGFSFKNCSIGG 879
DTGFSF C + G
Sbjct: 945 DTGFSFVKCKVTG 983
>ref|NM_121978.3| Arabidopsis thaliana pectinesterase AT5G19730 mRNA, complete cds
Length = 1336
Score = 167 bits (360), Expect(5) = 9e-062
Identities = 69/158 (43%), Positives = 92/158 (58%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
++EK+ + K FIT + + V W DTA T G P+GT SA+ AV S +F A
Sbjct: 471 YKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAK 650
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ FRN P+ PGA G QAVA+R+ + C + G QDTLYDH G HY+K C I G
Sbjct: 651 NITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEG 830
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIE 831
SVDFIFG S YE C + ++ ++ +TAQ RS +E
Sbjct: 831 SVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLE 944
Score = 54.2 bits (112), Expect(5) = 9e-062
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G +YLGRAWG SRVV++YT M ++P GW W E + Y
Sbjct: 987 GVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFY 1121
Score = 42.3 bits (86), Expect(5) = 9e-062
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
GA A RV WA +LT+ +AKPF+ ++ G WI+
Sbjct: 1140 GAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIK 1250
Score = 26.7 bits (52), Expect(5) = 9e-062
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1018 IYYGEFKCFGPGAD 1059
++YG++KC G GA+
Sbjct: 1113 VFYGQYKCTGAGAN 1154
Score = 24.4 bits (47), Expect(5) = 9e-062
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +3
Query: 841 DTGFSFKNCSIGG 879
DTGFSF C + G
Sbjct: 945 DTGFSFVKCKVTG 983
>gb|AY096559.1| Arabidopsis thaliana putative pectin methylesterase (At5g19730)
mRNA, complete cds
Length = 1183
Score = 167 bits (360), Expect(5) = 9e-062
Identities = 69/158 (43%), Positives = 92/158 (58%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
++EK+ + K FIT + + V W DTA T G P+GT SA+ AV S +F A
Sbjct: 367 YKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAK 546
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ FRN P+ PGA G QAVA+R+ + C + G QDTLYDH G HY+K C I G
Sbjct: 547 NITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEG 726
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIE 831
SVDFIFG S YE C + ++ ++ +TAQ RS +E
Sbjct: 727 SVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLE 840
Score = 54.2 bits (112), Expect(5) = 9e-062
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G +YLGRAWG SRVV++YT M ++P GW W E + Y
Sbjct: 883 GVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFY 1017
Score = 42.3 bits (86), Expect(5) = 9e-062
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
GA A RV WA +LT+ +AKPF+ ++ G WI+
Sbjct: 1036 GAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIK 1146
Score = 26.7 bits (52), Expect(5) = 9e-062
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1018 IYYGEFKCFGPGAD 1059
++YG++KC G GA+
Sbjct: 1009 VFYGQYKCTGAGAN 1050
Score = 24.4 bits (47), Expect(5) = 9e-062
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +1
Query: 841 DTGFSFKNCSIGG 879
DTGFSF C + G
Sbjct: 841 DTGFSFVKCKVTG 879
>emb|BX830327.1|CNS0A03P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB73ZF09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1160
Score = 105 bits (224), Expect(5) = 3e-053
Identities = 42/86 (48%), Positives = 54/86 (62%)
Frame = +1 / +2
Query: 574 PGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSF 753
PGA G QAVA+R+ + C + G QDTLYDH G HY+K C I GSVDFIFG S
Sbjct: 554 PGAVGKQAVALRVSADNAASFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSL 733
Query: 754 YEDCRIESVVKEVAVLTAQQRSKSIE 831
YE C + ++ ++ +TAQ RS +E
Sbjct: 734 YEGCHVHAIADKLGAVTAQGRSSVLE 811
Score = 64.3 bits (134), Expect(5) = 3e-053
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
++EK+ + K F+T + + V W DTA T G P+GT SA+ AV S +F A
Sbjct: 337 YKEKVSIPPLKAFMTIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAK 516
Query: 538 GVVFRNDAPL 567
+ FRN P+
Sbjct: 517 NITFRNTTPV 546
Score = 49.2 bits (101), Expect(5) = 3e-053
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G +YLGRAWG SRVV++ T M ++P GW W E + Y
Sbjct: 854 GVLYLGRAWGPFSRVVFA*TYMDNIILPRGWYNWGDPSREMTVFY 988
Score = 40.9 bits (83), Expect(5) = 3e-053
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
GA A RV WA +LT+ +AKPF+ ++ G WI+
Sbjct: 1007 GAGANYGGRVAWARELTDEEAKPFLCLTFIDGSEWIK 1117
Score = 26.7 bits (52), Expect(5) = 3e-053
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1018 IYYGEFKCFGPGAD 1059
++YG++KC G GA+
Sbjct: 980 VFYGQYKCTGAGAN 1021
>ref|NM_124941.1| Arabidopsis thaliana pectinesterase AT5G55590 mRNA, complete cds
Length = 1143
Score = 99.6 bits (211), Expect(6) = 4e-052
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +1 / +1
Query: 565 LAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFG 744
+A+ G +G QAVA+R+ G K Y + G QDTL+D G HYF C I+G+VDFIFG
Sbjct: 565 VAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNA 744
Query: 745 RSFYEDCRIESVVKEVAVLTAQQRSKSIE 831
+S Y+DC I S K + A R E
Sbjct: 745 KSLYQDCDIHSTAKRYGAIAAHHRDSETE 831
Score = 56.5 bits (117), Expect(6) = 4e-052
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQ 993
GQIYLGRAWG+ SR VYS + + + PVGW W+
Sbjct: 874 GQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWK 978
Score = 49.6 bits (102), Expect(6) = 4e-052
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +1 / +1
Query: 430 VVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRN 555
V+ W+D A+ G DGK +GT +A++++ESD+F A + F N
Sbjct: 433 VISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFEN 558
Score = 42.3 bits (86), Expect(6) = 4e-052
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
G A++ RV W+ LT + KPF+G ++ GD W++
Sbjct: 1027 GRGAERGGRVPWSKTLTRDEVKPFLGREFIYGDQWLR 1137
Score = 28.6 bits (56), Expect(6) = 4e-052
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 841 DTGFSFKNCSIGG 879
DTGFSF NC I G
Sbjct: 832 DTGFSFVNCDISG 870
Score = 23.5 bits (45), Expect(6) = 4e-052
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITF 405
+REK+ + SKP+I+F
Sbjct: 355 YREKVIVPKSKPYISF 402
>ref|NM_125562.1| Arabidopsis thaliana pectinesterase AT5G61680 mRNA, complete cds
Length = 1017
Score = 121 bits (258), Expect(5) = 2e-051
Identities = 52/116 (44%), Positives = 68/116 (58%)
Frame = +1 / +1
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SATL V SDYF A ++ +N AP+ KG QA+++R+ G K YNC G QD
Sbjct: 343 GTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQD 522
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIE 831
T+ D G H+FK C I G+ DFIFG GRS Y ++ V + V+TA + E
Sbjct: 523 TICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHAGKSAAE 690
Score = 45.1 bits (92), Expect(5) = 2e-051
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K+KRV + D+ + +AK F+ Y+ G +W+ PPP
Sbjct: 889 GTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 1008
Score = 44.1 bits (90), Expect(5) = 2e-051
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1 / +1
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGR+W +VVY+YT M V P GW
Sbjct: 733 GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGW 828
Score = 36.3 bits (73), Expect(5) = 2e-051
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V +G+G + IT A+ + NT+RVI+ + PG
Sbjct: 133 VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPG 234
Score = 33.6 bits (67), Expect(5) = 2e-051
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++EK+ ++ SKPFIT P V+ ++ TAA G
Sbjct: 238 YKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYG 345
>ref|NM_124123.3| Arabidopsis thaliana pectinesterase AT5G47500 mRNA, complete cds
Length = 1421
Score = 155 bits (332), Expect(2) = 5e-051
Identities = 64/154 (41%), Positives = 91/154 (59%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
+REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 321 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTAR 500
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ F N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I G
Sbjct: 501 NISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEG 680
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
S+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 681 SIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 782
Score = 69.8 bits (146), Expect(2) = 5e-051
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKK 1068
G +Y+GRA G SR+VY+YT V GWD W +S ++G + C+GPGA A +
Sbjct: 837 GPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATR 1016
Query: 1069 KKRVGWALDLTEA 1107
ALD A
Sbjct: 1017 GVSWARALDYESA 1055
>gb|AY102117.1| Arabidopsis thaliana AT5g47500/MNJ7_9 mRNA, complete cds
Length = 1325
Score = 155 bits (332), Expect(2) = 5e-051
Identities = 64/154 (41%), Positives = 91/154 (59%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
+REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 321 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTAR 500
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ F N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I G
Sbjct: 501 NISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEG 680
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
S+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 681 SIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 782
Score = 69.8 bits (146), Expect(2) = 5e-051
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKK 1068
G +Y+GRA G SR+VY+YT V GWD W +S ++G + C+GPGA A +
Sbjct: 837 GPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATR 1016
Query: 1069 KKRVGWALDLTEA 1107
ALD A
Sbjct: 1017 GVSWARALDYESA 1055
>emb|BX834011.1|CNS0A0HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL8ZH10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1195
Score = 155 bits (332), Expect(2) = 5e-051
Identities = 64/154 (41%), Positives = 91/154 (59%)
Frame = +1 / +2
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
+REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 245 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTAR 424
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ F N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I G
Sbjct: 425 NISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEG 604
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
S+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 605 SIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 706
Score = 69.8 bits (146), Expect(2) = 5e-051
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKK 1068
G +Y+GRA G SR+VY+YT V GWD W +S ++G + C+GPGA A +
Sbjct: 761 GPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATR 940
Query: 1069 KKRVGWALDLTEA 1107
ALD A
Sbjct: 941 GVSWARALDYESA 979
>gb|BT000565.1| Arabidopsis thaliana pectin methylesterase-like (At5g47500/MNJ7_9)
mRNA, complete cds
Length = 1089
Score = 155 bits (332), Expect(2) = 5e-051
Identities = 64/154 (41%), Positives = 91/154 (59%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
+REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 292 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTAR 471
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ F N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I G
Sbjct: 472 NISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEG 651
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
S+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 652 SIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 753
Score = 69.8 bits (146), Expect(2) = 5e-051
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKK 1068
G +Y+GRA G SR+VY+YT V GWD W +S ++G + C+GPGA A +
Sbjct: 808 GPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATR 987
Query: 1069 KKRVGWALDLTEA 1107
ALD A
Sbjct: 988 GVSWARALDYESA 1026
>emb|BX833551.1|CNS09YUC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL62ZA03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1268
Score = 155 bits (332), Expect(2) = 2e-049
Identities = 64/154 (41%), Positives = 91/154 (59%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAY 537
+REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 306 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTAR 485
Query: 538 GVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRG 717
+ F N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I G
Sbjct: 486 NISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEG 665
Query: 718 SVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
S+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 666 SIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 767
Score = 64.8 bits (135), Expect(2) = 2e-049
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKK 1068
G +Y+GRA G SR+VY+ T V GWD W +S ++G + C+GPGA A +
Sbjct: 822 GPLYVGRAMGQYSRIVYA*TYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATR 1001
Query: 1069 KKRVGWALDLTEA 1107
ALD A
Sbjct: 1002 GVSWARALDYESA 1040
>gb|AY087811.1| Arabidopsis thaliana clone 38574 mRNA, complete sequence
Length = 1233
Score = 109 bits (232), Expect(5) = 2e-049
Identities = 51/133 (38%), Positives = 70/133 (52%)
Frame = +1 / +1
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP KG QA+++R+ G YNC G QD
Sbjct: 499 GTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQD 678
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIEGAID 843
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A + E +
Sbjct: 679 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAAHAGKSAEENSGY 858
Query: 844 TGFSFKNCSIGGV 882
+ K GGV
Sbjct: 859 SFVHCKVTGTGGV 897
Score = 50.1 bits (103), Expect(5) = 2e-049
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 889 GGVIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 984
Score = 39.6 bits (80), Expect(5) = 2e-049
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1045 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPP 1164
Score = 37.7 bits (76), Expect(5) = 2e-049
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 307 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 390
Score = 36.8 bits (74), Expect(5) = 2e-049
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++REK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 391 EYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 501
>emb|BX813591.1|CNS0ADPM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB26ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1288
Score = 108 bits (230), Expect(5) = 1e-048
Identities = 46/108 (42%), Positives = 63/108 (58%)
Frame = +1 / +3
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP + KG QA+++R+ G YNC G QD
Sbjct: 483 GTVDSASLIILSDYFMAVNIVVKNTAPAPEGKTKGAQALSMRISGNFAAFYNCKFYGFQD 662
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTA 807
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A
Sbjct: 663 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAA 806
Score = 50.1 bits (103), Expect(5) = 1e-048
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 873 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 968
Score = 39.6 bits (80), Expect(5) = 1e-048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1029 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPP 1148
Score = 37.7 bits (76), Expect(5) = 1e-048
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 291 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 374
Score = 35.0 bits (70), Expect(5) = 1e-048
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1 / +3
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+++EK+ ++ +KPFIT P V+ + TAA G
Sbjct: 375 EYKEKVTIDRNKPFITLMGQPNAMPVITYEGTAAKYG 485
>gb|BT002992.1| Arabidopsis thaliana clone RAFL15-19-G04 (R20519) putative
pectinesterase (At1g69940) mRNA, complete cds
Length = 1357
Score = 107 bits (228), Expect(5) = 2e-048
Identities = 46/108 (42%), Positives = 62/108 (57%)
Frame = +1 / +2
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP KG QA+++R+ G YNC G QD
Sbjct: 497 GTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQD 676
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTA 807
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A
Sbjct: 677 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAA 820
Score = 50.1 bits (103), Expect(5) = 2e-048
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 887 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 982
Score = 39.6 bits (80), Expect(5) = 2e-048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1043 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPP 1162
Score = 37.7 bits (76), Expect(5) = 2e-048
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +2
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 305 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 388
Score = 35.4 bits (71), Expect(5) = 2e-048
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+++EK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 389 EYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 499
>ref|NM_105663.2| Arabidopsis thaliana pectinesterase AT1G69940 mRNA, complete cds
Length = 1338
Score = 107 bits (228), Expect(5) = 2e-048
Identities = 46/108 (42%), Positives = 62/108 (57%)
Frame = +1 / +2
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP KG QA+++R+ G YNC G QD
Sbjct: 497 GTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQD 676
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTA 807
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A
Sbjct: 677 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAA 820
Score = 50.1 bits (103), Expect(5) = 2e-048
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 887 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 982
Score = 39.6 bits (80), Expect(5) = 2e-048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1043 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPP 1162
Score = 37.7 bits (76), Expect(5) = 2e-048
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +2
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 305 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 388
Score = 35.4 bits (71), Expect(5) = 2e-048
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+++EK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 389 EYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 499
>gb|BT004063.1| Arabidopsis thaliana clone RAFL15-07-O07 (R20509) At5g07410 mRNA,
complete sequence
Length = 1411
Score = 107 bits (228), Expect(5) = 2e-047
Identities = 46/108 (42%), Positives = 62/108 (57%)
Frame = +1 / +2
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP KG QA+++R+ G YNC G QD
Sbjct: 506 GTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQD 685
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTA 807
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A
Sbjct: 686 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAA 829
Score = 50.1 bits (103), Expect(5) = 2e-047
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 896 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 991
Score = 39.1 bits (79), Expect(5) = 2e-047
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1052 GPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWLLPPP 1171
Score = 36.8 bits (74), Expect(5) = 2e-047
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++REK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 398 EYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 508
Score = 33.6 bits (67), Expect(5) = 2e-047
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + G
Sbjct: 314 GEFKTLTDAIKSVPAGNTKRVIIKMAHG 397
>ref|NM_120823.2| Arabidopsis thaliana pectinesterase AT5G07410 mRNA, complete cds
Length = 1395
Score = 107 bits (228), Expect(5) = 2e-047
Identities = 46/108 (42%), Positives = 62/108 (57%)
Frame = +1 / +2
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GTV SA+L + SDYF A +V +N AP KG QA+++R+ G YNC G QD
Sbjct: 500 GTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQD 679
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTA 807
T+ D G H+FK C + G+ DFIFG G S Y ++ V + V+ A
Sbjct: 680 TICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAA 823
Score = 50.1 bits (103), Expect(5) = 2e-047
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 890 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 985
Score = 39.1 bits (79), Expect(5) = 2e-047
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 1046 GPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWLLPPP 1165
Score = 36.8 bits (74), Expect(5) = 2e-047
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++REK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 392 EYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 502
Score = 33.6 bits (67), Expect(5) = 2e-047
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + G
Sbjct: 308 GEFKTLTDAIKSVPAGNTKRVIIKMAHG 391
>gb|BT002768.1| Arabidopsis thaliana clone RAFL15-02-N23 (R20202) putative
pectinesterase (At5g07420) mRNA, complete cds
Length = 1341
Score = 85.8 bits (181), Expect(5) = 3e-045
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ G K YNC G QDTL D +G H+FK C I G+ DFIFG G S Y +
Sbjct: 615 GQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQ 794
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+ A R + E
Sbjct: 795 LHAVGDGLRVIAAHNRQSTTE 857
Score = 52.4 bits (108), Expect(5) = 3e-045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 202 LDKKLSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
LD +L AE + +V+ +G GD+ I AA++ IP++N RVI+ L PG
Sbjct: 255 LDPELEAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPG 404
Score = 48.3 bits (99), Expect(5) = 3e-045
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G IYLGRAW +VVYSYT+M V P GW ++ + + Y
Sbjct: 900 GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFY 1037
Score = 37.7 bits (76), Expect(5) = 3e-045
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV D+ +A F+ Y+ G W+ PPP
Sbjct: 1056 GPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 1175
Score = 35.0 bits (70), Expect(5) = 3e-045
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1 / +3
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V + F A + N +P+ KPG +G
Sbjct: 474 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQG 617
>ref|NM_120824.2| Arabidopsis thaliana pectinesterase AT5G07420 mRNA, complete cds
Length = 1320
Score = 85.8 bits (181), Expect(5) = 3e-045
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ G K YNC G QDTL D +G H+FK C I G+ DFIFG G S Y +
Sbjct: 609 GQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQ 788
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+ A R + E
Sbjct: 789 LHAVGDGLRVIAAHNRQSTTE 851
Score = 52.4 bits (108), Expect(5) = 3e-045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 202 LDKKLSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
LD +L AE + +V+ +G GD+ I AA++ IP++N RVI+ L PG
Sbjct: 249 LDPELEAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPG 398
Score = 48.3 bits (99), Expect(5) = 3e-045
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G IYLGRAW +VVYSYT+M V P GW ++ + + Y
Sbjct: 894 GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFY 1031
Score = 37.7 bits (76), Expect(5) = 3e-045
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV D+ +A F+ Y+ G W+ PPP
Sbjct: 1050 GPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 1169
Score = 35.0 bits (70), Expect(5) = 3e-045
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1 / +3
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V + F A + N +P+ KPG +G
Sbjct: 468 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQG 611
>gb|AY086762.1| Arabidopsis thaliana clone 27469 mRNA, complete sequence
Length = 1318
Score = 85.8 bits (181), Expect(5) = 3e-045
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ G K YNC G QDTL D +G H+FK C I G+ DFIFG G S Y +
Sbjct: 609 GQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQ 788
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+ A R + E
Sbjct: 789 LHAVGDGLRVIAAHNRQSTTE 851
Score = 52.4 bits (108), Expect(5) = 3e-045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 202 LDKKLSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
LD +L AE + +V+ +G GD+ I AA++ IP++N RVI+ L PG
Sbjct: 249 LDPELEAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPG 398
Score = 48.3 bits (99), Expect(5) = 3e-045
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G IYLGRAW +VVYSYT+M V P GW ++ + + Y
Sbjct: 894 GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFY 1031
Score = 37.7 bits (76), Expect(5) = 3e-045
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV D+ +A F+ Y+ G W+ PPP
Sbjct: 1050 GPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 1169
Score = 35.0 bits (70), Expect(5) = 3e-045
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1 / +3
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V + F A + N +P+ KPG +G
Sbjct: 468 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQG 611
>gb|BT005059.1| Arabidopsis thaliana clone U20202 putative pectinesterase
(At5g07420) mRNA, complete cds
Length = 1117
Score = 85.8 bits (181), Expect(5) = 3e-045
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ G K YNC G QDTL D +G H+FK C I G+ DFIFG G S Y +
Sbjct: 517 GQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQ 696
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+ A R + E
Sbjct: 697 LHAVGDGLRVIAAHNRQSTTE 759
Score = 52.4 bits (108), Expect(5) = 3e-045
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 202 LDKKLSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
LD +L AE + +V+ +G GD+ I AA++ IP++N RVI+ L PG
Sbjct: 157 LDPELEAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPG 306
Score = 48.3 bits (99), Expect(5) = 3e-045
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1 / +1
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G IYLGRAW +VVYSYT+M V P GW ++ + + Y
Sbjct: 802 GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFY 939
Score = 37.7 bits (76), Expect(5) = 3e-045
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV D+ +A F+ Y+ G W+ PPP
Sbjct: 958 GPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 1077
Score = 35.0 bits (70), Expect(5) = 3e-045
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1 / +1
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V + F A + N +P+ KPG +G
Sbjct: 376 ETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPGTQG 519
>ref|NM_120825.3| Arabidopsis thaliana pectinesterase AT5G07430 mRNA, complete cds
Length = 1309
Score = 87.2 bits (184), Expect(5) = 5e-045
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ K Y+C G QDTL D KG H+FK C I G+ DFIFG G S Y + +
Sbjct: 607 GQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQ 786
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+TAQ R + E
Sbjct: 787 LHAVGDGLRVITAQGRQSATE 849
Score = 45.1 bits (92), Expect(5) = 5e-045
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1 / +1
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V ++YF A + +N AP+ KPG++G
Sbjct: 466 ETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQG 609
Score = 42.8 bits (87), Expect(5) = 5e-045
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPPK 1173
G + +KRV + D+ + + PF+ Y+ G TW+ PPPK
Sbjct: 1048 GPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 1170
Score = 42.3 bits (86), Expect(5) = 5e-045
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1 / +1
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGR+W +VVY++T+M V P GW
Sbjct: 892 GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGW 987
Score = 40.9 bits (83), Expect(5) = 5e-045
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1 / +1
Query: 193 KEPLDKKLSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
K LD L AE + V+ G ++ + A++ IP N RVI+ L PG
Sbjct: 238 KGTLDPALEAAEAARQIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPG 396
>ref|NM_129226.2| Arabidopsis thaliana pectinesterase AT2G36710 mRNA, complete cds
Length = 1421
Score = 122 bits (262), Expect(5) = 1e-044
Identities = 50/100 (50%), Positives = 63/100 (63%)
Frame = +1 / +2
Query: 487 TVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDT 666
T S + V + FTAY + F+N+AP PG QAVA+R+ G + Y C G QDT
Sbjct: 542 TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDT 721
Query: 667 LYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVK 786
L D KG H+FK C I+GS+DFIFG GRS Y+DC I S+ K
Sbjct: 722 LLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAK 841
Score = 46.9 bits (96), Expect(5) = 1e-044
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G+I LGRAWG + VV+S T M + P GW+ W
Sbjct: 944 GEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 1045
Score = 36.3 bits (73), Expect(5) = 1e-044
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 1018 IYYGEFKCFGPGADAKKKKRVGWALDLTEAQA 1113
+ +GE KC+GPGAD K++ G L +EA +
Sbjct: 1070 VTFGEHKCYGPGADYKERVLFGKQLTDSEASS 1165
Score = 27.6 bits (54), Expect(5) = 1e-044
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1 / +2
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+REK+ +N +K + + + + WNDTA + G
Sbjct: 431 YREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAG 538
Score = 23.5 bits (45), Expect(5) = 1e-044
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 844 TGFSFKNCSIGG 879
+GFSF NC I G
Sbjct: 905 SGFSFVNCKIDG 940
>gb|BT002906.1| Arabidopsis thaliana clone RAFL15-07-C17 (R20446) putative
pectinesterase family protein (At2g36710) mRNA, complete
cds
Length = 1479
Score = 119 bits (255), Expect(5) = 8e-044
Identities = 49/100 (49%), Positives = 62/100 (62%)
Frame = +1 / +2
Query: 487 TVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDT 666
T S + V + FTAY + F+N+AP PG QAVA+R+ G + Y C G QDT
Sbjct: 566 TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDT 745
Query: 667 LYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVK 786
L D KG H+FK C I+GS+ FIFG GRS Y+DC I S+ K
Sbjct: 746 LLDDKGRHFFKECFIQGSIGFIFGNGRSLYQDCTINSIAK 865
Score = 46.9 bits (96), Expect(5) = 8e-044
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G+I LGRAWG + VV+S T M + P GW+ W
Sbjct: 968 GEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 1069
Score = 36.3 bits (73), Expect(5) = 8e-044
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 1018 IYYGEFKCFGPGADAKKKKRVGWALDLTEAQA 1113
+ +GE KC+GPGAD K++ G L +EA +
Sbjct: 1094 VTFGEHKCYGPGADYKERVLFGKQLTDSEASS 1189
Score = 27.6 bits (54), Expect(5) = 8e-044
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1 / +2
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+REK+ +N +K + + + + WNDTA + G
Sbjct: 455 YREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAG 562
Score = 23.5 bits (45), Expect(5) = 8e-044
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 844 TGFSFKNCSIGG 879
+GFSF NC I G
Sbjct: 929 SGFSFVNCKIDG 964
>ref|NM_100410.1| Arabidopsis thaliana pectinesterase AT1G05310 mRNA, complete cds
Length = 1182
Score = 121 bits (258), Expect(5) = 8e-044
Identities = 49/104 (47%), Positives = 66/104 (63%)
Frame = +1 / +1
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GT AT+ V F A + F N AP+ KPG G QAVA+R+ G ++ C G QD
Sbjct: 490 GTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQD 669
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVA 795
TL+D +G HYFK C I+GS+DFIFG +S Y+DCRI S+ +++
Sbjct: 670 TLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLS 801
Score = 42.8 bits (87), Expect(5) = 8e-044
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G ++LGRAW SRVV+ T M + + P GW+ + +++ Y
Sbjct: 904 GHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFY 1038
Score = 35.0 bits (70), Expect(5) = 8e-044
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 1018 IYYGEFKCFGPGADAKKK 1071
I+YGE+ C GPGAD K+
Sbjct: 1030 IFYGEYNCSGPGADMSKR 1083
Score = 27.6 bits (54), Expect(5) = 8e-044
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 841 DTGFSFKNCSIGG 879
++GFSF NC+IGG
Sbjct: 862 NSGFSFVNCTIGG 900
Score = 27.6 bits (54), Expect(5) = 8e-044
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTA 453
+ EK+ + +KP IT + + WNDTA
Sbjct: 382 YYEKVVIPKTKPNITLQGQGFDITAIAWNDTA 477
>gb|BT005685.1| Arabidopsis thaliana clone U50785 putative pectinesterase
(At3g17060) mRNA, complete cds
Length = 1066
Score = 100 bits (212), Expect(5) = 3e-043
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 481 VGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQ 660
V V SAT VE+++F A+G+ RNDAP+ Q+VA + K Y+C
Sbjct: 343 VDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLH 522
Query: 661 DTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRI 771
+TL+D+KG HY+ C I+GS+DFIFG S + +C I
Sbjct: 523 NTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEI 633
Score = 45.5 bits (93), Expect(5) = 3e-043
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
++YLGRA G SRV+++ T + + VVP GW W
Sbjct: 751 EVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNW 849
Score = 42.8 bits (87), Expect(5) = 3e-043
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 214 LSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
L+E + +VD GKGDYT++ A++ +PV N+ +I+ ++ G
Sbjct: 106 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKG 243
Score = 37.3 bits (75), Expect(5) = 3e-043
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWI 1158
G A+++KR WA DLT+ + + F+ ++ G +W+
Sbjct: 901 GPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWL 1008
Score = 35.4 bits (71), Expect(5) = 3e-043
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 1009 SSGIYYGEFKCFGPGADAKKK 1071
+ +Y+GE+KC GPGA+ +K+
Sbjct: 865 TQNLYHGEYKCHGPGAERQKR 927
>dbj|AK118362.1| Arabidopsis thaliana At3g17060 mRNA for putative pectinesterase,
complete cds, clone: RAFL19-63-A15
Length = 1339
Score = 100 bits (212), Expect(5) = 8e-043
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +1 / +3
Query: 481 VGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQ 660
V V SAT VE+++F A+G+ RNDAP+ Q+VA + K Y+C
Sbjct: 372 VDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLH 551
Query: 661 DTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRI 771
+TL+D+KG HY+ C I+GS+DFIFG S + +C I
Sbjct: 552 NTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEI 662
Score = 45.5 bits (93), Expect(5) = 8e-043
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
++YLGRA G SRV+++ T + + VVP GW W
Sbjct: 780 EVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNW 878
Score = 42.8 bits (87), Expect(5) = 8e-043
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 214 LSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
L+E + +VD GKGDYT++ A++ +PV N+ +I+ ++ G
Sbjct: 135 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKG 272
Score = 37.3 bits (75), Expect(5) = 8e-043
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWI 1158
G A+++KR WA DLT+ + + F+ ++ G +W+
Sbjct: 930 GPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWL 1037
Score = 35.4 bits (71), Expect(5) = 8e-043
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 1009 SSGIYYGEFKCFGPGADAKKK 1071
+ +Y+GE+KC GPGA+ +K+
Sbjct: 894 TQNLYHGEYKCHGPGAERQKR 956
>gb|AY085221.1| Arabidopsis thaliana clone 13932 mRNA, complete sequence
Length = 1351
Score = 100 bits (212), Expect(5) = 8e-043
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 481 VGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQ 660
V V SAT VE+++F A+G+ RNDAP+ Q+VA + K Y+C
Sbjct: 383 VDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLH 562
Query: 661 DTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRI 771
+TL+D+KG HY+ C I+GS+DFIFG S + +C I
Sbjct: 563 NTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEI 673
Score = 45.5 bits (93), Expect(5) = 8e-043
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
++YLGRA G SRV+++ T + + VVP GW W
Sbjct: 791 EVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNW 889
Score = 42.8 bits (87), Expect(5) = 8e-043
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 214 LSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
L+E + +VD GKGDYT++ A++ +PV N+ +I+ ++ G
Sbjct: 146 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKG 283
Score = 37.3 bits (75), Expect(5) = 8e-043
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWI 1158
G A+++KR WA DLT+ + + F+ ++ G +W+
Sbjct: 941 GPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWL 1048
Score = 35.4 bits (71), Expect(5) = 8e-043
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 1009 SSGIYYGEFKCFGPGADAKKK 1071
+ +Y+GE+KC GPGA+ +K+
Sbjct: 905 TQNLYHGEYKCHGPGAERQKR 967
>ref|NM_112582.1| Arabidopsis thaliana pectinesterase AT3G17060 mRNA, complete cds
Length = 1351
Score = 100 bits (212), Expect(5) = 8e-043
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 481 VGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQ 660
V V SAT VE+++F A+G+ RNDAP+ Q+VA + K Y+C
Sbjct: 383 VDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLH 562
Query: 661 DTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRI 771
+TL+D+KG HY+ C I+GS+DFIFG S + +C I
Sbjct: 563 NTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEI 673
Score = 45.5 bits (93), Expect(5) = 8e-043
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
++YLGRA G SRV+++ T + + VVP GW W
Sbjct: 791 EVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNW 889
Score = 42.8 bits (87), Expect(5) = 8e-043
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 214 LSEAEKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
L+E + +VD GKGDYT++ A++ +PV N+ +I+ ++ G
Sbjct: 146 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKG 283
Score = 37.3 bits (75), Expect(5) = 8e-043
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWI 1158
G A+++KR WA DLT+ + + F+ ++ G +W+
Sbjct: 941 GPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWL 1048
Score = 35.4 bits (71), Expect(5) = 8e-043
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 1009 SSGIYYGEFKCFGPGADAKKK 1071
+ +Y+GE+KC GPGA+ +K+
Sbjct: 905 TQNLYHGEYKCHGPGAERQKR 967
>emb|BX830118.1|CNS0A06E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB60ZF07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1218
Score = 87.2 bits (184), Expect(5) = 1e-042
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1 / +2
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQA+A+R+ K Y+C G QDTL D KG H+FK C I G+ DFIFG G S Y + +
Sbjct: 611 GQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQ 790
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ +V + V+TAQ R + E
Sbjct: 791 LHAVGDGLRVITAQGRQSATE 853
Score = 45.1 bits (92), Expect(5) = 1e-042
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1 / +2
Query: 445 DTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKG 588
+T T GTV SATL V ++YF A + +N AP+ KPG++G
Sbjct: 470 ETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQG 613
Score = 42.8 bits (87), Expect(5) = 1e-042
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPPK 1173
G + +KRV + D+ + + PF+ Y+ G TW+ PPPK
Sbjct: 1052 GPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 1174
Score = 42.3 bits (86), Expect(5) = 1e-042
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGR+W +VVY++T+M V P GW
Sbjct: 896 GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGW 991
Score = 33.1 bits (66), Expect(5) = 1e-042
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1 / +2
Query: 226 EKKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
++++ V+ G ++ + A++ IP N RVI+ L PG
Sbjct: 275 KQREQIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPG 400
>ref|NM_129225.1| Arabidopsis thaliana pectinesterase AT2G36700 mRNA, complete cds
Length = 1002
Score = 137 bits (293), Expect(4) = 1e-041
Identities = 54/102 (52%), Positives = 67/102 (65%)
Frame = +1 / +1
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQD 663
GT S ++AV + FTAY + F+N AP PGA QAVA+++ G K Y C G QD
Sbjct: 343 GTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQD 522
Query: 664 TLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKE 789
TL D +G H+FKGC I GS+DFIFG GRS YEDC + S+ KE
Sbjct: 523 TLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKE 648
Score = 35.4 bits (71), Expect(4) = 1e-041
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 1018 IYYGEFKCFGPGADAKKKKRVGWALDLTEA 1107
+YYGE +C+GPGA+ K+ L EA
Sbjct: 865 VYYGEHRCYGPGANHSKRVTYAKLLSDVEA 954
Score = 35.0 bits (70), Expect(4) = 1e-041
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1 / +1
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
+++LGRAW +RV++S T M V GW+ K + + Y
Sbjct: 742 RVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYY 873
Score = 22.1 bits (42), Expect(4) = 1e-041
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / +1
Query: 844 TGFSFKNCSIGG 879
TGF F NC I G
Sbjct: 700 TGFVFVNCKITG 735
>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13
Length = 100592
Score = 91.3 bits (193), Expect(4) = 9e-039
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +1 / +3
Query: 553 NDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFI 732
N P+ PGA G QAVA+R+ + C + G QDTLYDH G HY+K C I GSVDFI
Sbjct: 61221 NTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFI 61400
Query: 733 FGFGRSFYE 759
FG S YE
Sbjct: 61401 FGNALSLYE 61427
Score = 59.7 bits (124), Expect(4) = 9e-039
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1 / +3
Query: 361 REKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAYG 540
REK+ + K FIT + + V W DTA T G P+GT SA+ AV S +F A
Sbjct: 60936 REKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKN 61115
Query: 541 VVFR 552
+ FR
Sbjct: 61116 ITFR 61127
Score = 53.8 bits (111), Expect(4) = 9e-039
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G +YLGRAWG SRVV++YT M ++P GW W
Sbjct: 61620 GVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNW 61721
Score = 42.3 bits (86), Expect(4) = 9e-039
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
GA A RV WA +LT+ +AKPF+ ++ G WI+
Sbjct: 62209 GAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIK 62319
>ref|NM_127732.1| Arabidopsis thaliana pectinesterase AT2G21610 mRNA, complete cds
Length = 1059
Score = 85.8 bits (181), Expect(5) = 2e-035
Identities = 36/81 (44%), Positives = 45/81 (55%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
G+AVA+R+ K Y C I QDTL D G HYFK C I G+ DFI G S YE C
Sbjct: 451 GRAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCH 630
Query: 769 IESVVKEVAVLTAQQRSKSIE 831
+ S+ +TAQ R+ + E
Sbjct: 631 LHSLSPNNGSITAQMRTSATE 693
Score = 48.3 bits (99), Expect(5) = 2e-035
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIY 1023
G +LGR WG SRVV++Y+ V P GW+ W + E++ Y
Sbjct: 736 GSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYY 870
Score = 39.6 bits (80), Expect(5) = 2e-035
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 1018 IYYGEFKCFGPGADAKKK 1071
+YYGE+KC+GPGAD +++
Sbjct: 862 VYYGEYKCYGPGADREQR 915
Score = 32.2 bits (64), Expect(5) = 2e-035
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIP 309
VD SGKGD++ I A+E IP
Sbjct: 157 VDQSGKGDFSKIQEAIESIP 216
Score = 28.6 bits (56), Expect(5) = 2e-035
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWND 447
+REK+ + KP+IT ++W+D
Sbjct: 268 YREKVVIPAEKPYITLSGTQASNTFLIWSD 357
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9
Length = 69142
Score = 89.0 bits (188), Expect(6) = 5e-035
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +1 / -3
Query: 547 FRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVD 726
F+N AP+ KG QA+++R+ G K YNC G QDT+ D G H+FK C I G+ D
Sbjct: 61784 FQNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFD 61605
Query: 727 FIFGFGRSFY 756
FIFG GRS Y
Sbjct: 61604 FIFGSGRSLY 61575
Score = 45.1 bits (92), Expect(6) = 5e-035
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1 / -2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K+KRV + D+ + +AK F+ Y+ G +W+ PPP
Sbjct: 61119 GTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 61000
Score = 44.1 bits (90), Expect(6) = 5e-035
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1 / -2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGR+W +VVY+YT M V P GW
Sbjct: 61365 GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGW 61270
Score = 36.3 bits (73), Expect(6) = 5e-035
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V +G+G + IT A+ + NT+RVI+ + PG
Sbjct: 62201 VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPG 62100
Score = 33.6 bits (67), Expect(6) = 5e-035
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++EK+ ++ SKPFIT P V+ ++ TAA G
Sbjct: 62096 YKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYG 61989
Score = 32.2 bits (64), Expect(6) = 5e-035
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 484 GTVGSATLAVESDYFTAYGVVFR 552
GTV SATL V SDYF A ++ +
Sbjct: 61991 GTVDSATLIVLSDYFMAVNIILK 61923
>dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDF20
Length = 86699
Score = 83.1 bits (175), Expect(5) = 9e-035
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +1 / +2
Query: 550 RNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDF 729
R + +A+ G +G QAVA+R+ G K Y + G QDTL+D G HYF C I+G+VDF
Sbjct: 12506 RQNTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDF 12685
Query: 730 IFGFGRSFYE 759
IFG +S Y+
Sbjct: 12686 IFGNAKSLYQ 12715
Score = 56.5 bits (117), Expect(5) = 9e-035
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQ 993
GQIYLGRAWG+ SR VYS + + + PVGW W+
Sbjct: 12923 GQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWK 13027
Score = 46.9 bits (96), Expect(5) = 9e-035
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +1 / +3
Query: 430 VVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAYGVVF 549
V+ W+D A+ G DGK +GT +A++++ESD+F A + F
Sbjct: 12291 VISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITF 12410
Score = 42.3 bits (86), Expect(5) = 9e-035
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQ 1161
G A++ RV W+ LT + KPF+G ++ GD W++
Sbjct: 13165 GRGAERGGRVPWSKTLTRDEVKPFLGREFIYGDQWLR 13275
Score = 28.6 bits (56), Expect(5) = 9e-035
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 841 DTGFSFKNCSIGG 879
DTGFSF NC I G
Sbjct: 12881 DTGFSFVNCDISG 12919
>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7
Length = 80117
Score = 90.9 bits (192), Expect(5) = 8e-033
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = +1 / -1
Query: 544 VFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSV 723
+ +N AP PG +G QAVA R+ G K C G QDTL D G HYFK C I GS+
Sbjct: 32075 IVKNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSI 31896
Query: 724 DFIFGFGRSFYE 759
DFIFG GRS Y+
Sbjct: 31895 DFIFGNGRSMYK 31860
Score = 53.8 bits (111), Expect(5) = 8e-033
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +1 / -2
Query: 361 REKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAYG 540
REK+ + +KP+ITF+ + + W+D A+ G +G+ + T +A++ V ++YFTA
Sbjct: 32347 REKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARN 32168
Query: 541 VVF 549
+ F
Sbjct: 32167 ISF 32159
Score = 46.0 bits (94), Expect(5) = 8e-033
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G +Y+GRA G SR+VY+YT V GWD W
Sbjct: 31572 GPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDW 31471
Score = 32.2 bits (64), Expect(5) = 8e-033
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1 / -1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQP 1164
G A + V WA L A PF+ +V G WI P
Sbjct: 31331 GPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWIAP 31218
Score = 27.2 bits (53), Expect(5) = 8e-033
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3 / -2
Query: 1194 CQRYIYLSTKQKRETQIYDLFIDEMFC 1274
CQ Y + STK K ++ ++ L+I C
Sbjct: 6793 CQCYSFFSTKFKTKSSVFTLWIHWSHC 6713
>gb|AY096561.1| Arabidopsis thaliana putative pectinesterase (At3g29090) mRNA,
complete cds
Length = 985
Score = 77.6 bits (163), Expect(5) = 1e-032
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQAVA+R+ + YNC G QDTLY H G Y K C I GSVDFIFG + E C
Sbjct: 358 GQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCH 537
Query: 769 IESVVKEVAVLTAQQRSKSIEGAI 840
I + +++ S+ G +
Sbjct: 538 IHCKSQGFITAQSRKSSQESTGYV 609
Score = 53.8 bits (111), Expect(5) = 1e-032
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1 / +1
Query: 874 GGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYY 1026
G + G +YLGR WG RVV +YT M + VGW W A+ E S +Y
Sbjct: 631 GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY 783
Score = 39.6 bits (80), Expect(5) = 1e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V G GDY ++ A++ +P+ NT R ++ L PG
Sbjct: 25 VSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPG 126
Score = 29.0 bits (57), Expect(5) = 1e-032
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAA 456
+R+ +++ K FITF + V+ WN+TA+
Sbjct: 130 YRQPVYVPKRKNFITFAGISPEITVLTWNNTAS 228
Score = 24.0 bits (46), Expect(5) = 1e-032
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1030 EFKCFGPGADAKKK 1071
E++CFGPG+ + ++
Sbjct: 784 EYRCFGPGSCSSER 825
>emb|BX826099.1|CNS0A58Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL84ZF08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1078
Score = 78.0 bits (164), Expect(5) = 1e-032
Identities = 32/61 (52%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQ VA+R+ + YNC G QDTLY H G Y K C I GSVDFIFG + EDC
Sbjct: 418 GQGVAIRVTAERCAFYNCRFLGWQDTLYLHHGKQYLKECYIEGSVDFIFGNSTALLEDCH 597
Query: 769 I 771
I
Sbjct: 598 I 600
Score = 53.8 bits (111), Expect(5) = 1e-032
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1 / +2
Query: 874 GGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYY 1026
G + G +YLGR WG RVV +YT M + VGW W A+ E S +Y
Sbjct: 692 GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY 844
Score = 39.6 bits (80), Expect(5) = 1e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V G GDY ++ A++ +P+ NT R ++ L PG
Sbjct: 84 VSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPG 185
Score = 29.0 bits (57), Expect(5) = 1e-032
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAA 456
+R+ +++ K FITF + V+ WN+TA+
Sbjct: 189 YRQPVYVPKRKNFITFAGISPEITVLTWNNTAS 287
Score = 24.0 bits (46), Expect(5) = 1e-032
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 1030 EFKCFGPGADAKKK 1071
E++CFGPG+ + ++
Sbjct: 845 EYRCFGPGSCSSER 886
>gb|AY070091.1| Arabidopsis thaliana putative pectinesterase (At3g29090) mRNA,
complete cds
Length = 1139
Score = 77.6 bits (163), Expect(5) = 2e-032
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQAVA+R+ + YNC G QDTLY H G Y K C I GSVDFIFG + E C
Sbjct: 417 GQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCH 596
Query: 769 IESVVKEVAVLTAQQRSKSIEGAI 840
I + +++ S+ G +
Sbjct: 597 IHCKSQGFITAQSRKSSQESTGYV 668
Score = 53.8 bits (111), Expect(5) = 2e-032
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1 / +3
Query: 874 GGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYY 1026
G + G +YLGR WG RVV +YT M + VGW W A+ E S +Y
Sbjct: 690 GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY 842
Score = 39.6 bits (80), Expect(5) = 2e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V G GDY ++ A++ +P+ NT R ++ L PG
Sbjct: 84 VSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPG 185
Score = 29.0 bits (57), Expect(5) = 2e-032
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAA 456
+R+ +++ K FITF + V+ WN+TA+
Sbjct: 189 YRQPVYVPKRKNFITFAGISPEITVLTWNNTAS 287
Score = 24.0 bits (46), Expect(5) = 2e-032
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 1030 EFKCFGPGADAKKK 1071
E++CFGPG+ + ++
Sbjct: 843 EYRCFGPGSCSSER 884
>gb|AY084418.1| Arabidopsis thaliana clone 107962 mRNA, complete sequence
Length = 1158
Score = 77.6 bits (163), Expect(5) = 2e-032
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQAVA+R+ + YNC G QDTLY H G Y K C I GSVDFIFG + E C
Sbjct: 451 GQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCH 630
Query: 769 IESVVKEVAVLTAQQRSKSIEGAI 840
I + +++ S+ G +
Sbjct: 631 IHCKSQGFITAQSRKSSQESTGYV 702
Score = 53.8 bits (111), Expect(5) = 2e-032
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1 / +1
Query: 874 GGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYY 1026
G + G +YLGR WG RVV +YT M + VGW W A+ E S +Y
Sbjct: 724 GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY 876
Score = 39.6 bits (80), Expect(5) = 2e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V G GDY ++ A++ +P+ NT R ++ L PG
Sbjct: 118 VSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPG 219
Score = 29.0 bits (57), Expect(5) = 2e-032
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAA 456
+R+ +++ K FITF + V+ WN+TA+
Sbjct: 223 YRQPVYVPKRKNFITFAGISPEITVLTWNNTAS 321
Score = 24.0 bits (46), Expect(5) = 2e-032
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1030 EFKCFGPGADAKKK 1071
E++CFGPG+ + ++
Sbjct: 877 EYRCFGPGSCSSER 918
>ref|NM_113832.1| Arabidopsis thaliana pectinesterase AT3G29090 mRNA, complete cds
Length = 1158
Score = 77.6 bits (163), Expect(5) = 2e-032
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCR 768
GQAVA+R+ + YNC G QDTLY H G Y K C I GSVDFIFG + E C
Sbjct: 451 GQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCH 630
Query: 769 IESVVKEVAVLTAQQRSKSIEGAI 840
I + +++ S+ G +
Sbjct: 631 IHCKSQGFITAQSRKSSQESTGYV 702
Score = 53.8 bits (111), Expect(5) = 2e-032
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1 / +1
Query: 874 GGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYY 1026
G + G +YLGR WG RVV +YT M + VGW W A+ E S +Y
Sbjct: 724 GNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY 876
Score = 39.6 bits (80), Expect(5) = 2e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V G GDY ++ A++ +P+ NT R ++ L PG
Sbjct: 118 VSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPG 219
Score = 29.0 bits (57), Expect(5) = 2e-032
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1 / +1
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAA 456
+R+ +++ K FITF + V+ WN+TA+
Sbjct: 223 YRQPVYVPKRKNFITFAGISPEITVLTWNNTAS 321
Score = 24.0 bits (46), Expect(5) = 2e-032
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 1030 EFKCFGPGADAKKK 1071
E++CFGPG+ + ++
Sbjct: 877 EYRCFGPGSCSSER 918
>gb|AC010675.6|AC010675 Arabidopsis thaliana chromosome 1 BAC T17F3 genomic sequence,
complete sequence
Length = 84723
Score = 77.6 bits (163), Expect(6) = 5e-032
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1 / +3
Query: 553 NDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFI 732
N AP KG QA+++R+ G YNC G QDT+ D G H+FK C + G+ DFI
Sbjct: 9030 NTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 9209
Query: 733 FGFGRSFY 756
FG G S Y
Sbjct: 9210 FGSGTSMY 9233
Score = 50.1 bits (103), Expect(6) = 5e-032
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 9423 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 9518
Score = 39.6 bits (80), Expect(6) = 5e-032
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV + D+ + +A F+ Y+ G W+ PPP
Sbjct: 9670 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPP 9789
Score = 37.7 bits (76), Expect(6) = 5e-032
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 8685 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 8768
Score = 35.4 bits (71), Expect(6) = 5e-032
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+++EK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 8769 EYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 8879
Score = 30.9 bits (61), Expect(6) = 5e-032
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1 / +3
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAP 564
GTV SA+L + SDYF A +V + P
Sbjct: 8877 GTVDSASLIILSDYFMAVNIVVKVSDP 8957
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
Length = 116763
Score = 78.0 bits (164), Expect(4) = 1e-026
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +1 / +1
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFY 756
GQA+A+R+ G K YNC G QDTL D +G H+FK C I G+ DFIFG G S Y
Sbjct: 65626 GQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLY 65793
Score = 77.6 bits (163), Expect(6) = 2e-031
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1 / +3
Query: 553 NDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFI 732
N AP KG QA+++R+ G YNC G QDT+ D G H+FK C + G+ DFI
Sbjct: 61677 NTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 61856
Query: 733 FGFGRSFY 756
FG G S Y
Sbjct: 61857 FGSGTSMY 61880
Score = 74.8 bits (157), Expect(5) = 6e-025
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFY 756
GQA+A+R+ K Y+C G QDTL D KG H+FK C I G+ DFIFG G S Y
Sbjct: 68466 GQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLY 68633
Score = 50.1 bits (103), Expect(6) = 2e-031
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
GG IYLGRAW +VVY+YT+M V P GW
Sbjct: 62071 GGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGW 62166
Score = 47.8 bits (98), Expect(4) = 1e-026
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGRAW +VVYSYT+M V P GW
Sbjct: 66008 GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGW 66103
Score = 42.8 bits (87), Expect(6) = 2e-031
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPPK 1173
G + +KRV + D+ + + PF+ Y+ G TW+ PPPK
Sbjct: 69110 GPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 69232
Score = 42.3 bits (86), Expect(5) = 6e-025
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 886 GGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGW 981
G IYLGR+W +VVY++T+M V P GW
Sbjct: 68853 GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGW 68948
Score = 42.3 bits (86), Expect(4) = 1e-026
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 250 VDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
V+ +G GD+ I AA++ IP++N RVI+ L PG
Sbjct: 65226 VNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPG 65327
Score = 37.7 bits (76), Expect(4) = 1e-026
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1 / +2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G + K KRV D+ +A F+ Y+ G W+ PPP
Sbjct: 66407 GPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLLPPP 66526
Score = 37.3 bits (75), Expect(5) = 6e-025
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1 / +3
Query: 229 KKKVTYVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPG 351
K K++ V+ G ++ + A++ IP N RVI+ L PG
Sbjct: 68043 KMKISLQVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPG 68165
Score = 36.8 bits (74), Expect(6) = 2e-031
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++REK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 61413 EYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 61523
Score = 36.3 bits (73), Expect(5) = 6e-025
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 1018 IYYGEFKCFGPGADAKKK 1071
++YGE+KCFGPG+ +K+
Sbjct: 69083 VFYGEYKCFGPGSHLEKR 69136
Score = 34.1 bits (68), Expect(5) = 6e-025
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1 / +3
Query: 358 FREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+ EK+ ++I++PFIT P V+ ++ TAA G
Sbjct: 68169 YNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYG 68276
Score = 33.6 bits (67), Expect(6) = 2e-031
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + G
Sbjct: 61329 GEFKTLTDAIKSVPAGNTKRVIIKMAHG 61412
Score = 30.9 bits (61), Expect(6) = 2e-031
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1 / +3
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAP 564
GTV SA+L + SDYF A +V + P
Sbjct: 61521 GTVDSASLIILSDYFMAVNIVVKVSDP 61601
>gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map mi238, complete
sequence
Length = 54433
Score = 70.7 bits (148), Expect(6) = 9e-029
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = +1 / +3
Query: 589 GQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYE 759
G+AVA+R+ K Y C I QDTL D G HYFK C I G+ DFI G S YE
Sbjct: 29811 GRAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYE 29981
Score = 46.4 bits (95), Expect(6) = 9e-029
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1 / +2
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G +LGR WG SRVV++Y+ V P GW+ W
Sbjct: 30419 GSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 30520
Score = 40.5 bits (82), Expect(6) = 9e-029
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 1012 SGIYYGEFKCFGPGADAKKK 1071
S +YYGE+KC+GPGAD +++
Sbjct: 30624 STVYYGEYKCYGPGADREQR 30683
Score = 37.3 bits (75), Expect(6) = 9e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1 / +3
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G A +++RV W+ L++ +A F+ ++ G W++P P
Sbjct: 30657 GPGADREQRVEWSKQLSDEEATVFLSKDFIGGKDWLRPAP 30776
Score = 32.2 bits (64), Expect(6) = 9e-029
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 250 VDPSGKGDYTNITAALEDIP 309
VD SGKGD++ I A+E IP
Sbjct: 29119 VDQSGKGDFSKIQEAIESIP 29178
Score = 29.5 bits (58), Expect(6) = 9e-029
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1 / +2
Query: 322 KRVILDLKPGAQFREKLFLNISKPFITFRSDPKKPAVVVWND 447
K ++L + REK+ + KP+IT ++W+D
Sbjct: 29444 KYIVLRISDFIDNREKVVIPAEKPYITLSGTQASNTFLIWSD 29569
>ref|NM_127472.1| Arabidopsis thaliana pectinesterase AT2G19150 mRNA, complete cds
Length = 1020
Score = 84.5 bits (178), Expect(4) = 6e-028
Identities = 36/93 (38%), Positives = 50/93 (53%)
Frame = +1 / +1
Query: 496 SATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYD 675
SAT G+ F+N +A + AVA + G K I + + DG QDTLYD
Sbjct: 340 SATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLGDKYAIIDSSFDGFQDTLYD 519
Query: 676 HKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIE 774
G HY+K C+I G +DFIFG +S +E C ++
Sbjct: 520 DYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLK 618
Score = 47.3 bits (97), Expect(4) = 6e-028
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQ 993
G+ LGRAW SRV++ + + ++P+GWD W+
Sbjct: 736 GKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWK 840
Score = 26.7 bits (52), Expect(4) = 6e-028
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / +1
Query: 997 AKPESSGIYYGEFKCFGPGADAKKK 1071
AK + I + EF C G GAD K+
Sbjct: 841 AKGQEGHITFVEFGCTGVGADTSKR 915
Score = 24.0 bits (46), Expect(4) = 6e-028
Identities = 10/40 (25%), Positives = 15/40 (37%)
Frame = +1 / +1
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWIQPPP 1170
G A KRV W +E F ++ + W+ P
Sbjct: 889 GVGADTSKRVPWLTKASEKDVLQFTNLTFIDEEGWLSRLP 1008
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 77.6 bits (163), Expect(4) = 8e-028
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1 / -3
Query: 553 NDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFI 732
N AP KG QA+++R+ G YNC G QDT+ D G H+FK C + G+ DFI
Sbjct: 10585632 NTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 10585453
Query: 733 FGFGRSFY 756
FG G S Y
Sbjct: 10585452 FGSGTSMY 10585429
Score = 37.7 bits (76), Expect(4) = 8e-028
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / -3
Query: 268 GDYTNITAALEDIPVSNTKRVILDLKPG 351
G++ +T A++ +P NTKRVI+ + PG
Sbjct: 10585977 GEFKTLTDAIKSVPAGNTKRVIIKMAPG 10585894
Score = 35.4 bits (71), Expect(4) = 8e-028
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
+++EK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 10585893 EYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 10585783
Score = 30.9 bits (61), Expect(4) = 8e-028
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1 / -3
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAP 564
GTV SA+L + SDYF A +V + P
Sbjct: 10585785 GTVDSASLIILSDYFMAVNIVVKVSDP 10585705
>gb|AY201500.1|AY201500 AY201500 Arabidopsis thaliana Landsberg DNA Arabidopsis thaliana
genomic clone GT3601.Ds3.03.20.2002.jw21.676, DNA
sequence
Length = 676
Score = 77.6 bits (163), Expect(4) = 3e-026
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1 / +3
Query: 553 NDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFI 732
N AP KG QA+++R+ G YNC G QDT+ D G H+FK C + G+ DFI
Sbjct: 339 NTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 518
Query: 733 FGFGRSFY 756
FG G S Y
Sbjct: 519 FGSGTSMY 542
Score = 36.8 bits (74), Expect(4) = 3e-026
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 355 QFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNG 465
++REK+ ++ +KPFIT P V+ ++ TAA G
Sbjct: 75 EYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYG 185
Score = 33.1 bits (66), Expect(4) = 3e-026
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 283 ITAALEDIPVSNTKRVILDLKPG 351
+T A++ +P NTKRVI+ + PG
Sbjct: 6 LTDAIKSVPAGNTKRVIIKMAPG 74
Score = 29.0 bits (57), Expect(4) = 3e-026
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 484 GTVGSATLAVESDYFTAYGVVFRNDAP 564
GTV SA+L + SDYF +V + P
Sbjct: 183 GTVDSASLIILSDYFMVVNIVVKVSDP 263
>gb|CF773166.1|CF773166 AG_FSL_13G10 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 13G10, mRNA sequence
Length = 384
Score = 121 bits (258), Expect = 6e-026
Identities = 51/111 (45%), Positives = 65/111 (58%)
Frame = +1 / +1
Query: 487 TVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDT 666
T +A++ V ++YFTA + F N AP PG +G QAVA R+ G K C G QDT
Sbjct: 1 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDT 180
Query: 667 LYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
L D G HYFK C I GS+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 181 LCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 333
>gb|CF773925.1|CF773925 AG_FSL_24F08 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 24F08, mRNA sequence
Length = 384
Score = 121 bits (258), Expect = 6e-026
Identities = 51/111 (45%), Positives = 65/111 (58%)
Frame = +1 / -1
Query: 487 TVGSATLAVESDYFTAYGVVFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDT 666
T +A++ V ++YFTA + F N AP PG +G QAVA R+ G K C G QDT
Sbjct: 384 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDT 205
Query: 667 LYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRS 819
L D G HYFK C I GS+DFIFG GRS Y+DC + S+ + A R+
Sbjct: 204 LCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRT 52
>gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map g6825, complete
sequence
Length = 92376
Score = 100 bits (212), Expect(3) = 8e-023
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +1 / -2
Query: 550 RNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDF 729
+N AP PGA QAVA+++ G K Y C G QDTL D +G H+FKGC I GS+DF
Sbjct: 36833 KNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDF 36654
Query: 730 IFGFGRSFYE 759
IFG GRS YE
Sbjct: 36653 IFGNGRSLYE 36624
Score = 93.6 bits (198), Expect(3) = 9e-026
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +1 / -2
Query: 550 RNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDF 729
+N+AP PG QAVA+R+ G + Y C G QDTL D KG H+FK C I+GS+DF
Sbjct: 41801 KNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDF 41622
Query: 730 IFGFGRSFYE 759
IFG GRS Y+
Sbjct: 41621 IFGNGRSLYQ 41592
Score = 46.9 bits (96), Expect(3) = 9e-026
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1 / -3
Query: 889 GQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGW 990
G+I LGRAWG + VV+S T M + P GW+ W
Sbjct: 41392 GEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 41291
Score = 36.3 bits (73), Expect(3) = 9e-026
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1 / -2
Query: 1012 SGIYYGEFKCFGPGADAKKKKRVGWALDLTEA 1107
S +YYGE +C+GPGA+ K+ L EA
Sbjct: 36221 STVYYGEHRCYGPGANHSKRVTYAKLLSDVEA 36126
Score = 34.5 bits (69), Expect(3) = 8e-023
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1 / -1
Query: 892 QIYLGRAWGDSSRVVYSYTKMGEEVVPVGWD 984
+++LGRAW +RV++S T M V GW+
Sbjct: 36411 RVWLGRAWRPYARVIFSKTYMSRVVSLDGWN 36319
Score = 32.2 bits (64), Expect(3) = 8e-023
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1 / -2
Query: 1051 GADAKKKKRVGWALDLTEAQAKPFVGTHYVLGDTWI 1158
G A KRV +A L++ +A PF ++ G+ W+
Sbjct: 36188 GPGANHSKRVTYAKLLSDVEAAPFTNISFIDGEEWL 36081
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,706,230,803
Number of Sequences: 1013581
Number of extensions: 22004247
Number of successful extensions: 121843
Number of sequences better than 1.0e-020: 70
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 92933139567
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)