TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106097.2.2
(1005 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosph... 172 5e-065
ref|NM_122035.1| Arabidopsis thaliana transferase, transfer... 172 5e-065
gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosph... 172 6e-065
emb|CQ805578.1| Sequence 1989 from Patent WO2004035798 172 6e-065
ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G1... 185 9e-062
gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA... 185 9e-062
gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene... 185 9e-062
gb|AV554671.1|AV554671 AV554671 Arabidopsis thaliana roots ... 172 2e-061
dbj|AK221835.1| Arabidopsis thaliana mRNA for sucrose-phosp... 172 4e-061
emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome ... 87 1e-054
emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5... 87 1e-054
gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 80 1e-045
gb|CB260096.1|CB260096 95-E9623-013-004-M24-T7R MPIZ-ADIS-0... 114 3e-044
gb|B26421.1|B26421 F2I11TF IGF Arabidopsis thaliana genomic... 87 3e-042
gb|AV523442.1|AV523442 AV523442 Arabidopsis thaliana aboveg... 164 4e-042
gb|AV522872.1|AV522872 AV522872 Arabidopsis thaliana aboveg... 155 2e-039
gb|BP811776.1|BP811776 BP811776 RAFL19 Arabidopsis thaliana... 74 2e-035
gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 129 9e-034
ref|NM_100370.2| Arabidopsis thaliana transferase, transfer... 129 9e-034
gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 129 9e-034
ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT... 126 1e-033
dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 1e-033
ref|NM_117080.4| Arabidopsis thaliana transferase, transfer... 126 1e-033
dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 1e-033
emb|CQ805456.1| Sequence 1867 from Patent WO2004035798 126 1e-033
dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 1e-032
dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosp... 126 1e-032
gb|B26324.1|B26324 F18G7TF IGF Arabidopsis thaliana genomic... 79 2e-032
gb|AQ965615.1|AQ965615 LERID41TFB LERG Arabidopsis thaliana... 87 7e-032
gb|AQ965616.1|AQ965616 LERID41TR LERG Arabidopsis thaliana ... 84 5e-031
gb|AV566769.1|AV566769 AV566769 Arabidopsis thaliana green ... 126 1e-027
emb|AL081194.1|CNS00MX8 Arabidopsis thaliana genome survey ... 73 1e-027
gb|AV563250.1|AV563250 AV563250 Arabidopsis thaliana green ... 122 1e-026
gb|AI995432.1|AI995432 701674073 A. thaliana, Columbia Col-... 118 3e-025
gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 73 8e-024
emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome... 73 8e-024
emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosom... 73 4e-023
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 73 1e-022
gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F... 68 4e-022
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 68 7e-022
>gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3494
Score = 172 bits (371), Expect(4) = 5e-065
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 2710 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 2889
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 2890 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 3054
Score = 87.7 bits (185), Expect(3) = 7e-025
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 2984 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 2805
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 2804 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 2700
Score = 73.9 bits (155), Expect(4) = 5e-065
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 2593 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 2718
Score = 44.1 bits (90), Expect(3) = 7e-025
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 2696 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 2601
Score = 31.3 bits (62), Expect(4) = 5e-065
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 2527 GLNPNDFDAFICNSGSDLHYTSLNNED 2607
Score = 29.9 bits (59), Expect(4) = 5e-065
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 3073 LHANRSYPLTDVISFESNNV 3132
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -1
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 2606 SSLLRDV*WRSLPLLHMKASKSFGFKP 2526
>ref|NM_122035.1| Arabidopsis thaliana transferase, transferring glycosyl groups
AT5G20280 mRNA, complete cds
Length = 3478
Score = 172 bits (371), Expect(4) = 5e-065
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 2710 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 2889
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 2890 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 3054
Score = 87.7 bits (185), Expect(3) = 7e-025
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 2984 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 2805
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 2804 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 2700
Score = 73.9 bits (155), Expect(4) = 5e-065
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 2593 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 2718
Score = 44.1 bits (90), Expect(3) = 7e-025
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 2696 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 2601
Score = 31.3 bits (62), Expect(4) = 5e-065
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 2527 GLNPNDFDAFICNSGSDLHYTSLNNED 2607
Score = 29.9 bits (59), Expect(4) = 5e-065
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 3073 LHANRSYPLTDVISFESNNV 3132
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -3
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 2606 SSLLRDV*WRSLPLLHMKASKSFGFKP 2526
>gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3163
Score = 172 bits (371), Expect(4) = 6e-065
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 2644 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 2823
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 2824 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 2988
Score = 87.7 bits (185), Expect(3) = 7e-025
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 2918 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 2739
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 2738 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 2634
Score = 73.9 bits (155), Expect(4) = 6e-065
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 2527 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 2652
Score = 44.1 bits (90), Expect(3) = 7e-025
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 2630 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 2535
Score = 31.3 bits (62), Expect(4) = 6e-065
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 2461 GLNPNDFDAFICNSGSDLHYTSLNNED 2541
Score = 29.9 bits (59), Expect(4) = 6e-065
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 3007 LHANRSYPLTDVISFESNNV 3066
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -3
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 2540 SSLLRDV*WRSLPLLHMKASKSFGFKP 2460
>emb|CQ805578.1| Sequence 1989 from Patent WO2004035798
Length = 3132
Score = 172 bits (371), Expect(4) = 6e-065
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 2644 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 2823
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 2824 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 2988
Score = 87.7 bits (185), Expect(3) = 7e-025
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -2
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 2918 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 2739
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 2738 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 2634
Score = 73.9 bits (155), Expect(4) = 6e-065
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 2527 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 2652
Score = 44.1 bits (90), Expect(3) = 7e-025
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -2
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 2630 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 2535
Score = 31.3 bits (62), Expect(4) = 6e-065
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 2461 GLNPNDFDAFICNSGSDLHYTSLNNED 2541
Score = 29.9 bits (59), Expect(4) = 6e-065
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 3007 LHANRSYPLTDVISFESNNV 3066
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -2
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 2540 SSLLRDV*WRSLPLLHMKASKSFGFKP 2460
>ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G11110 mRNA, complete cds
Length = 3576
Score = 185 bits (399), Expect(3) = 9e-062
Identities = 72/115 (62%), Positives = 93/115 (80%)
Frame = +3 / +3
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK K + +I +EDE S+ YC+SFK + A PP+KE+R+ MR QALRC+ +Y +G++
Sbjct: 2841 EKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQNGAR 3020
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
LNVIPVLASRSQALRYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 3021 LNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 3185
Score = 84.9 bits (179), Expect(2) = 1e-022
Identities = 45/97 (46%), Positives = 55/97 (56%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T MFD S PHR KYL+A +R+A+TGIT +L P W QR+A LI L SF GG
Sbjct: 3115 TNTTMFDKSMPHRTSKYLRA*DRDARTGITLSLAPFWQ*TALQRNA*FLINFLSSFIGGI 2936
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQRI 179
A L + Q*+ E SSS I FFS+ + I
Sbjct: 2935 KAGSFTLKDRQ*LVEEDSSSTKISPFFVFFFSSTELI 2825
Score = 65.7 bits (137), Expect(3) = 9e-062
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +3
Query: 102 LPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQK 221
LP+ +D DYHS IE+RWGGE LRKTLIRW + +++ K
Sbjct: 2739 LPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKKKTK 2858
Score = 44.1 bits (90), Expect(2) = 1e-022
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3 / -3
Query: 187 QRINVFLKPSPPQRYSIWE**SRSIMNGSS 98
QRI VFLK SPPQR SIWE *S S + GS+
Sbjct: 2824 QRIKVFLKLSPPQRNSIWEW*SASSV*GSA 2735
Score = 27.6 bits (54), Expect(3) = 9e-062
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G++ F A IC+ +L SS SED
Sbjct: 2649 GLKPQDFDAVICSSGSELYFTSSGSED 2729
>gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA, complete cds
Length = 2803
Score = 185 bits (399), Expect(3) = 9e-062
Identities = 72/115 (62%), Positives = 93/115 (80%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK K + +I +EDE S+ YC+SFK + A PP+KE+R+ MR QALRC+ +Y +G++
Sbjct: 2197 EKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQNGAR 2376
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
LNVIPVLASRSQALRYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 2377 LNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 2541
Score = 84.9 bits (179), Expect(2) = 1e-022
Identities = 45/97 (46%), Positives = 55/97 (56%)
Frame = -3 / -3
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T MFD S PHR KYL+A +R+A+TGIT +L P W QR+A LI L SF GG
Sbjct: 2471 TNTTMFDKSMPHRTSKYLRA*DRDARTGITLSLAPFWQ*TALQRNA*FLINFLSSFIGGI 2292
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQRI 179
A L + Q*+ E SSS I FFS+ + I
Sbjct: 2291 KAGSFTLKDRQ*LVEEDSSSTKISPFFVFFFSSTELI 2181
Score = 65.7 bits (137), Expect(3) = 9e-062
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +1
Query: 102 LPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQK 221
LP+ +D DYHS IE+RWGGE LRKTLIRW + +++ K
Sbjct: 2095 LPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKKKTK 2214
Score = 44.1 bits (90), Expect(2) = 1e-022
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3 / -3
Query: 187 QRINVFLKPSPPQRYSIWE**SRSIMNGSS 98
QRI VFLK SPPQR SIWE *S S + GS+
Sbjct: 2180 QRIKVFLKLSPPQRNSIWEW*SASSV*GSA 2091
Score = 27.6 bits (54), Expect(3) = 9e-062
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G++ F A IC+ +L SS SED
Sbjct: 2005 GLKPQDFDAVICSSGSELYFTSSGSED 2085
>gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene, complete cds
Length = 2685
Score = 185 bits (399), Expect(3) = 9e-062
Identities = 72/115 (62%), Positives = 93/115 (80%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK K + +I +EDE S+ YC+SFK + A PP+KE+R+ MR QALRC+ +Y +G++
Sbjct: 2182 EKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQNGAR 2361
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
LNVIPVLASRSQALRYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 2362 LNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 2526
Score = 84.9 bits (179), Expect(2) = 1e-022
Identities = 45/97 (46%), Positives = 55/97 (56%)
Frame = -3 / -2
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T MFD S PHR KYL+A +R+A+TGIT +L P W QR+A LI L SF GG
Sbjct: 2456 TNTTMFDKSMPHRTSKYLRA*DRDARTGITLSLAPFWQ*TALQRNA*FLINFLSSFIGGI 2277
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQRI 179
A L + Q*+ E SSS I FFS+ + I
Sbjct: 2276 KAGSFTLKDRQ*LVEEDSSSTKISPFFVFFFSSTELI 2166
Score = 65.7 bits (137), Expect(3) = 9e-062
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +1
Query: 102 LPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQK 221
LP+ +D DYHS IE+RWGGE LRKTLIRW + +++ K
Sbjct: 2080 LPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKKKTK 2199
Score = 44.1 bits (90), Expect(2) = 1e-022
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3 / -2
Query: 187 QRINVFLKPSPPQRYSIWE**SRSIMNGSS 98
QRI VFLK SPPQR SIWE *S S + GS+
Sbjct: 2165 QRIKVFLKLSPPQRNSIWEW*SASSV*GSA 2076
Score = 27.6 bits (54), Expect(3) = 9e-062
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G++ F A IC+ +L SS SED
Sbjct: 1990 GLKPQDFDAVICSSGSELYFTSSGSED 2070
>gb|AV554671.1|AV554671 AV554671 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ98c05R 5', mRNA sequence
Length = 549
Score = 172 bits (371), Expect(3) = 2e-061
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 196 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 375
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 376 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 540
Score = 87.7 bits (185), Expect(3) = 7e-025
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -2
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 470 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 291
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 290 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 186
Score = 73.9 bits (155), Expect(3) = 2e-061
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 79 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 204
Score = 44.1 bits (90), Expect(3) = 7e-025
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -2
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 182 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 87
Score = 31.3 bits (62), Expect(3) = 2e-061
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 13 GLNPNDFDAFICNSGSDLHYTSLNNED 93
Score = 22.6 bits (43), Expect(3) = 7e-025
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -2
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 92 SSLLRDV*WRSLPLLHMKASKSFGFKP 12
>dbj|AK221835.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase-like
protein, partial cds, clone: RAFL22-01-E09
Length = 901
Score = 172 bits (371), Expect(3) = 4e-061
Identities = 65/115 (56%), Positives = 90/115 (78%)
Frame = +3 / +3
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+R+ +RIQALRCHV+YS +G++
Sbjct: 150 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTR 329
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+NVIPVLASR QALRYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 330 INVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 494
Score = 87.7 bits (185), Expect(2) = 2e-023
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -1
Query: 469 TITVMFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGA 290
T T +F S PHR KYL+AC REA TG+TF +P L TWQR A IL L S TGG
Sbjct: 424 TNTAIFAMSIPHRTNKYLRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFLSSLTGGT 245
Query: 289 AAVLDPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
AA +N Q* E S+ + I LS FFS ++
Sbjct: 244 AAGFLTVNV*Q*SVERCSARVTICSSLSAFFSLSE 140
Score = 73.9 bits (155), Expect(3) = 4e-061
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +3
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 33 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 158
Score = 44.1 bits (90), Expect(2) = 2e-023
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 136 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 41
Score = 29.9 bits (59), Expect(3) = 4e-061
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 513 LHANRSYPLTDVISFESNNV 572
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project)
Length = 110992
Score = 86.8 bits (183), Expect(5) = 1e-054
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3 / +3
Query: 405 SQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
S RYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 3369 SSVFRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 3503
Score = 73.5 bits (154), Expect(5) = 1e-054
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / +2
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 3152 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 3286
Score = 65.7 bits (137), Expect(5) = 1e-054
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +3
Query: 102 LPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQK 221
LP+ +D DYHS IE+RWGGE LRKTLIRW + +++ K
Sbjct: 2847 LPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKKKTK 2966
Score = 36.8 bits (74), Expect(5) = 1e-054
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / +3
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTA 287
EK K + +I +EDE S+ YC+SFK + A
Sbjct: 2949 EKKKTKKGEILVEDESSSTNYCLSFKVKDPA 3041
Score = 27.6 bits (54), Expect(5) = 1e-054
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G++ F A IC+ +L SS SED
Sbjct: 2757 GLKPQDFDAVICSSGSELYFTSSGSED 2837
>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
Length = 96379
Score = 86.8 bits (183), Expect(5) = 1e-054
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3 / +2
Query: 405 SQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
S RYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 91748 SSVFRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 91882
Score = 73.5 bits (154), Expect(5) = 1e-054
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / +1
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 91531 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 91665
Score = 65.7 bits (137), Expect(5) = 1e-054
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 102 LPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKERGQK 221
LP+ +D DYHS IE+RWGGE LRKTLIRW + +++ K
Sbjct: 91226 LPYTLDADYHSHIEFRWGGESLRKTLIRWISSVEEKKKTK 91345
Score = 36.8 bits (74), Expect(5) = 1e-054
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / +2
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTA 287
EK K + +I +EDE S+ YC+SFK + A
Sbjct: 91328 EKKKTKKGEILVEDESSSTNYCLSFKVKDPA 91420
Score = 27.6 bits (54), Expect(5) = 1e-054
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G++ F A IC+ +L SS SED
Sbjct: 91136 GLKPQDFDAVICSSGSELYFTSSGSED 91216
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24
Length = 101458
Score = 79.9 bits (168), Expect(5) = 1e-045
Identities = 26/41 (63%), Positives = 37/41 (90%)
Frame = +3 / -1
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL++RWG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 49663 RYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 49541
Score = 78.5 bits (165), Expect(5) = 1e-045
Identities = 30/42 (71%), Positives = 39/42 (92%)
Frame = +3 / -1
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
PPV+E+R+ +RIQALRCHV+YS +G+++NVIPVLASR QALR
Sbjct: 49858 PPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLASRIQALR 49733
Score = 73.9 bits (155), Expect(5) = 1e-045
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / -1
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 50167 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 50042
Score = 31.3 bits (62), Expect(5) = 1e-045
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / -1
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 50233 GLNPNDFDAFICNSGSDLHYTSLNNED 50153
Score = 29.9 bits (59), Expect(5) = 1e-045
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / -1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 49522 LHANRSYPLTDVISFESNNV 49463
>gb|CB260096.1|CB260096 95-E9623-013-004-M24-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770M244Q 5-PRIME, mRNA sequence
Length = 668
Score = 114 bits (244), Expect(3) = 3e-044
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = +3 / +2
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
EK + ++I E S+ YC +F AA PPV+E+ + +RIQALRCHV+YS +G++
Sbjct: 401 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELXKLLRIQALRCHVVYSQNGTR 580
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNI 458
+NVIPVLASR QAL YL++RWG++++ +
Sbjct: 581 INVIPVLASRIQALXYLFVRWGIDMAKM 664
Score = 79.9 bits (168), Expect(3) = 1e-022
Identities = 42/91 (46%), Positives = 51/91 (56%)
Frame = -3 / -3
Query: 457 MFDSSTPHRIYKYLKACEREAKTGITFNLLPSWLYKTWQRSACILIVLLISFTGGAAAVL 278
+F S PHR KY +AC REA TG+TF +P L TWQR A IL S TGG AA
Sbjct: 663 IFAMSIPHRTNKYXRACIREASTGMTFIRVPF*L*TTWQRKAWILSSFXSSLTGGTAAGF 484
Query: 277 DPLNEMQ*VDEHSSSSINIFCPLSLFFSAAQ 185
+N Q* E S+ + I LS FFS ++
Sbjct: 483 LTVNV*Q*SVERCSARVTICSSLSAFFSLSE 391
Score = 73.9 bits (155), Expect(3) = 3e-044
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 284 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 409
Score = 44.1 bits (90), Expect(3) = 1e-022
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 190 AQRINVFLKPSPPQRYSIWE**SRSIMNGSSA 95
AQRI VFL PSPP YS+WE * +S G S+
Sbjct: 387 AQRIKVFLSPSPPHLYSMWEW**KSTTKGPSS 292
Score = 31.3 bits (62), Expect(3) = 3e-044
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 218 GLNPNDFDAFICNSGSDLHYTSLNNED 298
Score = 22.6 bits (43), Expect(3) = 1e-022
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3 / -3
Query: 82 SSELEDGXQRSXXLLHMKAXXXLASIP 2
SS L D RS LLHMKA P
Sbjct: 297 SSLLRDV*WRSLPLLHMKASKSFGFKP 217
>gb|B26421.1|B26421 F2I11TF IGF Arabidopsis thaliana genomic clone F2I11, DNA sequence
Length = 659
Score = 86.8 bits (183), Expect(4) = 3e-042
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3 / +2
Query: 405 SQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
S RYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 479 SSVFRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 613
Score = 73.5 bits (154), Expect(4) = 3e-042
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / +1
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 262 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 396
Score = 36.8 bits (74), Expect(4) = 3e-042
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / +2
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTA 287
EK K + +I +EDE S+ YC+SFK + A
Sbjct: 59 EKKKTKKGEILVEDESSSTNYCLSFKVKDPA 151
Score = 34.1 bits (68), Expect(4) = 3e-042
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / +2
Query: 147 RWGGEGLRKTLIRWAAEKNKERGQK 221
RWGGE KTLIRW + +++ K
Sbjct: 2 RWGGESFWKTLIRWISSVEEKKKTK 76
>gb|AV523442.1|AV523442 AV523442 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27g06F 3', mRNA
sequence
Length = 559
Score = 164 bits (353), Expect(2) = 4e-042
Identities = 60/95 (63%), Positives = 81/95 (85%)
Frame = +3 / -1
Query: 255 YCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIR 434
YC +F AA PPV+E+R+ +RIQALRCHV+YS +G+++NVIPVLASR QALRYL++R
Sbjct: 556 YCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLASRIQALRYLFVR 377
Query: 435 WGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
WG++++ + V VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 376 WGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG 272
Score = 29.9 bits (59), Expect(2) = 4e-042
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / -1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 253 LHANRSYPLTDVISFESNNV 194
>gb|AV522872.1|AV522872 AV522872 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL08d02F 3', mRNA
sequence
Length = 619
Score = 155 bits (334), Expect(2) = 2e-039
Identities = 57/85 (67%), Positives = 77/85 (90%)
Frame = +3 / -1
Query: 285 AAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITV 464
AA PPV+E+R+ +RIQALRCHV+YS +G+++NVIPVLASR QALRYL++RWG++++ + V
Sbjct: 604 AAYPPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLASRIQALRYLFVRWGIDMAKMAV 425
Query: 465 IVGECGDTDYEGLLGGVHKTIILKG 539
VGE GDTDYEGLLGG+HK+++LKG
Sbjct: 424 FVGESGDTDYEGLLGGLHKSVVLKG 350
Score = 29.9 bits (59), Expect(2) = 2e-039
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / -1
Query: 564 VHANRSYSSQDVVSFDKQGI 623
+HANRSY DV+SF+ +
Sbjct: 331 LHANRSYPLTDVISFESNNV 272
>gb|BP811776.1|BP811776 BP811776 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-01-E09 5',
mRNA sequence
Length = 390
Score = 73.9 bits (155), Expect(3) = 2e-035
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 32 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 157
Score = 73.5 bits (154), Expect(3) = 2e-035
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 330 QALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRW 437
QALRCHV+YS +G+++NVIPVLASR QALRYL++RW
Sbjct: 283 QALRCHVVYSQNGTRINVIPVLASRIQALRYLFVRW 390
Score = 43.2 bits (88), Expect(3) = 2e-035
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3 / +2
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQ 332
EK + ++I E S+ YC +F AA PPV+E+R+ +RI+
Sbjct: 149 EKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIR 286
>gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3471
Score = 129 bits (277), Expect(2) = 9e-034
Identities = 45/115 (39%), Positives = 81/115 (70%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
E + + ED+ S+++C+++ + + V ++R+ +R++ LRCH +Y + ++
Sbjct: 2797 EARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHPMYCRNSTR 2976
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+ ++P+LASRSQALRYL++RW + ++N+ V+VG+ GDTDYE L+ G HKT+I+KG
Sbjct: 2977 MQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKG 3141
Score = 36.8 bits (74), Expect(2) = 9e-034
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 117 DLDYHSQIEYRWGGEGLRKTL 179
D DY S I+YRWG EGL+ T+
Sbjct: 2701 DPDYSSHIDYRWGMEGLKNTV 2763
>ref|NM_100370.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT1G04920 mRNA, complete cds
Length = 3469
Score = 129 bits (277), Expect(2) = 9e-034
Identities = 45/115 (39%), Positives = 81/115 (70%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
E + + ED+ S+++C+++ + + V ++R+ +R++ LRCH +Y + ++
Sbjct: 2797 EARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHPMYCRNSTR 2976
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+ ++P+LASRSQALRYL++RW + ++N+ V+VG+ GDTDYE L+ G HKT+I+KG
Sbjct: 2977 MQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKG 3141
Score = 36.8 bits (74), Expect(2) = 9e-034
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 117 DLDYHSQIEYRWGGEGLRKTL 179
D DY S I+YRWG EGL+ T+
Sbjct: 2701 DPDYSSHIDYRWGMEGLKNTV 2763
>gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3189
Score = 129 bits (277), Expect(2) = 9e-034
Identities = 45/115 (39%), Positives = 81/115 (70%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSK 374
E + + ED+ S+++C+++ + + V ++R+ +R++ LRCH +Y + ++
Sbjct: 2689 EARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHPMYCRNSTR 2868
Query: 375 LNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
+ ++P+LASRSQALRYL++RW + ++N+ V+VG+ GDTDYE L+ G HKT+I+KG
Sbjct: 2869 MQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKG 3033
Score = 36.8 bits (74), Expect(2) = 9e-034
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 117 DLDYHSQIEYRWGGEGLRKTL 179
D DY S I+YRWG EGL+ T+
Sbjct: 2593 DPDYSSHIDYRWGMEGLKNTV 2655
>ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT4G10120 transcript variant
AT4G10120.2 mRNA, complete cds
Length = 3468
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +3
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2871 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3050
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3051 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3161
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 2739 MVDADYETHVEYKWPGESIRSVILR 2813
>dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL21-92-G10
Length = 3462
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +3
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2871 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3050
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3051 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3161
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 2739 MVDADYETHVEYKWPGESIRSVILR 2813
>ref|NM_117080.4| Arabidopsis thaliana transferase, transferring glycosyl groups
AT4G10120 transcript variant AT4G10120.1 mRNA, complete
cds
Length = 3457
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2860 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3039
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3040 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3150
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 2728 MVDADYETHVEYKWPGESIRSVILR 2802
>dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-62-A14
Length = 3438
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2860 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3039
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3040 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3150
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 2728 MVDADYETHVEYKWPGESIRSVILR 2802
>emb|CQ805456.1| Sequence 1867 from Patent WO2004035798
Length = 3252
Score = 126 bits (270), Expect(2) = 1e-033
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2806 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 2985
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 2986 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3096
Score = 39.6 bits (80), Expect(2) = 1e-033
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 2674 MVDADYETHVEYKWPGESIRSVILR 2748
>dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-49-M07
Length = 3438
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2860 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3039
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3040 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3150
Score = 36.3 bits (73), Expect(2) = 1e-032
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3 / +1
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + + Y+W GE +R ++R
Sbjct: 2728 MVDADYETHVGYKWPGESIRSVILR 2802
>dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-83-J09
Length = 3438
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / +1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 2860 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 3039
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 3040 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 3150
Score = 36.3 bits (73), Expect(2) = 1e-032
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3 / +1
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + + Y+W GE +R ++R
Sbjct: 2728 MVDADYETHVGYKWPGESIRSVILR 2802
>gb|B26324.1|B26324 F18G7TF IGF Arabidopsis thaliana genomic clone F18G7, DNA sequence
Length = 668
Score = 78.5 bits (165), Expect(3) = 2e-032
Identities = 30/42 (71%), Positives = 39/42 (92%)
Frame = +3 / +2
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
PPV+E+R+ +RIQALRCHV+YS +G+++NVIPVLASR QALR
Sbjct: 473 PPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLASRIQALR 598
Score = 73.9 bits (155), Expect(3) = 2e-032
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 87 LNPAELPFMIDLDYHSQIEYRWGGEGLRKTLIRWAAEKNKER 212
LN + PF++D YHS IEYRWGGEGLRKTLIRWA+ N+++
Sbjct: 164 LNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKK 289
Score = 31.3 bits (62), Expect(3) = 2e-032
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 3 GIEASXFXAFICNXXXDLXXPSSSSED 83
G+ + F AFICN DL S ++ED
Sbjct: 98 GLNPNDFDAFICNSGSDLHYTSLNNED 178
>gb|AQ965615.1|AQ965615 LERID41TFB LERG Arabidopsis thaliana genomic clone LERID41, DNA
sequence
Length = 597
Score = 86.8 bits (183), Expect(2) = 7e-032
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3 / +1
Query: 405 SQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
S RYL +RWG++LSN+ V VG+ GDTDYEGLLGG+HKT+ILKG
Sbjct: 364 SSVFRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKG 498
Score = 73.5 bits (154), Expect(2) = 7e-032
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / +3
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 147 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 281
>gb|AQ965616.1|AQ965616 LERID41TR LERG Arabidopsis thaliana genomic clone LERID41, DNA
sequence
Length = 448
Score = 84.0 bits (177), Expect(2) = 5e-031
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +3 / -2
Query: 405 SQALRYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
S RYL +RWG++LSN+ V VG+ GDTDYEGLLGG+H T+ILKG
Sbjct: 210 SSVFRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHXTVILKG 76
Score = 73.5 bits (154), Expect(2) = 5e-031
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / -1
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 427 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 293
>gb|AV566769.1|AV566769 AV566769 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ250b02F 3', mRNA sequence
Length = 554
Score = 126 bits (270), Expect = 1e-027
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3 / -1
Query: 249 STYCISFKGSNTAAAPPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
ST C + V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL
Sbjct: 536 STRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLS 357
Query: 429 IRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 356 IRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 246
>emb|AL081194.1|CNS00MX8 Arabidopsis thaliana genome survey sequence T7 end of BAC F2I11 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 534
Score = 73.5 bits (154), Expect(4) = 1e-027
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3 / +3
Query: 294 PPVKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLY 428
PP+KE+R+ MR QALRC+ +Y +G++LNVIPVLASRSQALR ++
Sbjct: 261 PPMKELRKLMRNQALRCNAVYCQNGARLNVIPVLASRSQALR*IF 395
Score = 39.6 bits (80), Expect(4) = 1e-027
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 147 RWGGEGLRKTLIRWAAEKNKERGQK 221
RWGGE LRKTLIRW + +++ K
Sbjct: 1 RWGGESLRKTLIRWISSVEEKKKTK 75
Score = 35.9 bits (72), Expect(4) = 1e-027
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 195 EKNKERGQKIFIEDEECSSTYCISFKGSNTA 287
EK K + +I +EDE S+ YC+SFK + A
Sbjct: 58 EKKKTK*GEILVEDESSSTNYCLSFKVKDPA 150
Score = 32.2 bits (64), Expect(4) = 1e-027
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 405 SQALRYLYIRWGVELSNI 458
S RYL +RWG++LSN+
Sbjct: 478 SSVFRYLLVRWGIDLSNM 531
>gb|AV563250.1|AV563250 AV563250 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ183h10F 3', mRNA sequence
Length = 549
Score = 122 bits (262), Expect = 1e-026
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = +3 / -3
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGEC 479
V + R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALRYL IRWG+++S +GE
Sbjct: 547 VDDFRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLSIRWGIDMSKTVFFLGEK 368
Query: 480 GDTDYEGLLGGVHKTIILKG 539
GDTDYE LLGG+HKTIILKG
Sbjct: 367 GDTDYEDLLGGLHKTIILKG 308
>gb|AI995432.1|AI995432 701674073 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701674073, mRNA sequence
Length = 557
Score = 118 bits (252), Expect = 3e-025
Identities = 45/73 (61%), Positives = 60/73 (82%)
Frame = +3 / -1
Query: 321 MRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNITVIVGECGDTDYEG 500
+R++ LRC+++Y+H ++LNVIP+ ASR QALRYL IRWG+++S +GE GDTDYE
Sbjct: 509 LRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLSIRWGIDMSKTVFFLGEKGDTDYED 330
Query: 501 LLGGVHKTIILKG 539
LLGG+HKTIILKG
Sbjct: 329 LLGGLHKTIILKG 291
>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
Length = 83922
Score = 73.5 bits (154), Expect(3) = 8e-024
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / -2
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 81872 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 81750
Score = 55.6 bits (115), Expect(3) = 8e-024
Identities = 20/40 (50%), Positives = 33/40 (82%)
Frame = +3 / -1
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALR
Sbjct: 82089 VDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALR 81970
Score = 39.6 bits (80), Expect(3) = 8e-024
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / -2
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 82352 MVDADYETHVEYKWPGESIRSVILR 82278
>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
Length = 85907
Score = 73.5 bits (154), Expect(3) = 8e-024
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 46380 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 46502
Score = 55.6 bits (115), Expect(3) = 8e-024
Identities = 20/40 (50%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALR
Sbjct: 46163 VDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALR 46282
Score = 39.6 bits (80), Expect(3) = 8e-024
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 45900 MVDADYETHVEYKWPGESIRSVILR 45974
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
Length = 198005
Score = 73.5 bits (154), Expect(3) = 4e-023
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 144741 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 144863
Score = 55.6 bits (115), Expect(3) = 4e-023
Identities = 20/40 (50%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALR
Sbjct: 144524 VDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALR 144643
Score = 39.6 bits (80), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 111 MIDLDYHSQIEYRWGGEGLRKTLIR 185
M+D DY + +EY+W GE +R ++R
Sbjct: 144261 MVDADYETHVEYKWPGESIRSVILR 144335
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 73.5 bits (154), Expect(2) = 1e-022
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL IRWG+++S +GE GDTDYE LLGG+HKTIILKG
Sbjct: 2232234 RYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKG 2232356
Score = 55.6 bits (115), Expect(2) = 1e-022
Identities = 20/40 (50%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALR 419
V ++R+ +R++ LRC+++Y+H ++LNVIP+ ASR QALR
Sbjct: 2232017 VDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALR 2232136
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
Length = 89713
Score = 68.0 bits (142), Expect(3) = 4e-022
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +3 / +1
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL++RW + ++N+ V+VG+ GDTDYE L+ G HKT+I+KG
Sbjct: 30643 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKG 30765
Score = 58.3 bits (121), Expect(3) = 4e-022
Identities = 19/42 (45%), Positives = 34/42 (80%)
Frame = +3 / +1
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYL 425
V ++R+ +R++ LRCH +Y + +++ ++P+LASRSQALRY+
Sbjct: 30421 VDDLRQKLRLRGLRCHPMYCRNSTRMQIVPLLASRSQALRYV 30546
Score = 36.8 bits (74), Expect(3) = 4e-022
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 117 DLDYHSQIEYRWGGEGLRKTL 179
D DY S I+YRWG EGL+ T+
Sbjct: 30147 DPDYSSHIDYRWGMEGLKNTV 30209
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 68.0 bits (142), Expect(2) = 7e-022
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +3 / -1
Query: 417 RYLYIRWGVELSNITVIVGECGDTDYEGLLGGVHKTIILKG 539
RYL++RW + ++N+ V+VG+ GDTDYE L+ G HKT+I+KG
Sbjct: 1392027 RYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKG 1391905
Score = 58.3 bits (121), Expect(2) = 7e-022
Identities = 19/42 (45%), Positives = 34/42 (80%)
Frame = +3 / -1
Query: 300 VKEIRRTMRIQALRCHVLYSHDGSKLNVIPVLASRSQALRYL 425
V ++R+ +R++ LRCH +Y + +++ ++P+LASRSQALRY+
Sbjct: 1392249 VDDLRQKLRLRGLRCHPMYCRNSTRMQIVPLLASRSQALRYV 1392124
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,981,925,013
Number of Sequences: 1013581
Number of extensions: 28399936
Number of successful extensions: 142244
Number of sequences better than 1.0e-020: 46
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 67922109921
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)